Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56347.t1 | XP_003598367.2 | 96.6 | 437 | 15 | 0 | 1 | 437 | 1 | 437 | 6.50E-242 | 846.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56347.t1 | Q3EAQ5 | 58.1 | 442 | 172 | 4 | 1 | 436 | 1 | 435 | 3.0e-142 | 506.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56347.t1 | G7IVI0 | 96.6 | 437 | 15 | 0 | 1 | 437 | 1 | 437 | 4.7e-242 | 846.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063903 | MS.gene56347 | PPI |
| MS.gene016424 | MS.gene56347 | PPI |
| MS.gene56347 | MS.gene79081 | PPI |
| MS.gene56347 | MS.gene59760 | PPI |
| MS.gene56347 | MS.gene016425 | PPI |
| MS.gene56347 | MS.gene78669 | PPI |
| MS.gene56347 | MS.gene75533 | PPI |
| MS.gene063904 | MS.gene56347 | PPI |
| MS.gene78670 | MS.gene56347 | PPI |
| MS.gene016423 | MS.gene56347 | PPI |
| MS.gene59759 | MS.gene56347 | PPI |
| MS.gene51711 | MS.gene56347 | PPI |
| MS.gene56347 | MS.gene016422 | PPI |
| MS.gene56347 | MS.gene78668 | PPI |
| MS.gene56348 | MS.gene56347 | PPI |
| MS.gene56347 | MS.gene064910 | PPI |
| MS.gene56347 | MS.gene51995 | PPI |
| MS.gene56347 | MS.gene75531 | PPI |
| MS.gene56347 | MS.gene038683 | PPI |
| MS.gene56347 | MS.gene045176 | PPI |
| MS.gene063906 | MS.gene56347 | PPI |
| MS.gene56347 | MS.gene063905 | PPI |
| MS.gene51992 | MS.gene56347 | PPI |
| MS.gene59758 | MS.gene56347 | PPI |
| MS.gene064455 | MS.gene56347 | PPI |
| MS.gene56347 | MS.gene78667 | PPI |
| MS.gene51712 | MS.gene56347 | PPI |
| MS.gene59757 | MS.gene56347 | PPI |
| MS.gene56347 | MS.gene009215 | PPI |
| MS.gene067076 | MS.gene56347 | PPI |
| MS.gene78669 | MS.gene56347 | PPI |
| MS.gene56347 | MS.gene045173 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56347.t1 | MTR_3g010820 | 96.568 | 437 | 15 | 0 | 1 | 437 | 1 | 437 | 0.0 | 869 |
| MS.gene56347.t1 | MTR_8g062990 | 94.508 | 437 | 24 | 0 | 1 | 437 | 1 | 437 | 0.0 | 846 |
| MS.gene56347.t1 | MTR_8g042770 | 69.863 | 438 | 130 | 2 | 1 | 437 | 1 | 437 | 0.0 | 655 |
| MS.gene56347.t1 | MTR_8g042780 | 70.794 | 428 | 121 | 1 | 10 | 437 | 7 | 430 | 0.0 | 653 |
| MS.gene56347.t1 | MTR_8g042780 | 70.561 | 428 | 122 | 1 | 10 | 437 | 7 | 430 | 0.0 | 652 |
| MS.gene56347.t1 | MTR_3g086440 | 72.769 | 437 | 118 | 1 | 1 | 437 | 1 | 436 | 0.0 | 645 |
| MS.gene56347.t1 | MTR_8g042870 | 68.493 | 438 | 133 | 2 | 1 | 437 | 1 | 434 | 0.0 | 626 |
| MS.gene56347.t1 | MTR_3g010850 | 71.005 | 438 | 120 | 4 | 1 | 437 | 1 | 432 | 0.0 | 606 |
| MS.gene56347.t1 | MTR_3g010850 | 70.077 | 391 | 113 | 2 | 47 | 437 | 34 | 420 | 0.0 | 531 |
| MS.gene56347.t1 | MTR_8g042820 | 70.070 | 284 | 81 | 1 | 153 | 436 | 34 | 313 | 1.08e-147 | 423 |
| MS.gene56347.t1 | MTR_1194s0010 | 69.231 | 143 | 44 | 0 | 10 | 152 | 7 | 149 | 4.25e-70 | 219 |
| MS.gene56347.t1 | MTR_1157s0010 | 70.000 | 110 | 33 | 0 | 328 | 437 | 1 | 110 | 8.51e-48 | 161 |
| MS.gene56347.t1 | MTR_8g075280 | 47.872 | 94 | 32 | 3 | 42 | 134 | 107 | 184 | 5.21e-14 | 71.2 |
| MS.gene56347.t1 | MTR_8g075280 | 47.872 | 94 | 32 | 3 | 42 | 134 | 107 | 184 | 1.79e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56347.t1 | AT3G43790 | 58.145 | 442 | 172 | 4 | 1 | 436 | 1 | 435 | 0.0 | 520 |
| MS.gene56347.t1 | AT3G43790 | 58.145 | 442 | 172 | 4 | 1 | 436 | 1 | 435 | 0.0 | 520 |
| MS.gene56347.t1 | AT3G43790 | 58.145 | 442 | 172 | 4 | 1 | 436 | 1 | 435 | 0.0 | 519 |
| MS.gene56347.t1 | AT3G43790 | 58.145 | 442 | 172 | 4 | 1 | 436 | 1 | 435 | 0.0 | 519 |
| MS.gene56347.t1 | AT5G13750 | 56.136 | 440 | 174 | 3 | 7 | 437 | 6 | 435 | 0.0 | 516 |
| MS.gene56347.t1 | AT5G13740 | 58.161 | 435 | 173 | 4 | 8 | 434 | 7 | 440 | 1.33e-179 | 509 |
| MS.gene56347.t1 | AT5G13740 | 58.161 | 435 | 173 | 4 | 8 | 434 | 7 | 440 | 1.02e-178 | 508 |
| MS.gene56347.t1 | AT3G43790 | 57.282 | 412 | 163 | 4 | 1 | 406 | 1 | 405 | 3.69e-166 | 473 |
| MS.gene56347.t1 | AT5G13750 | 54.567 | 416 | 170 | 3 | 7 | 413 | 6 | 411 | 4.34e-166 | 473 |
| MS.gene56347.t1 | AT5G13750 | 54.567 | 416 | 170 | 3 | 7 | 413 | 6 | 411 | 4.34e-166 | 473 |
| MS.gene56347.t1 | AT5G13750 | 55.710 | 359 | 140 | 3 | 88 | 437 | 1 | 349 | 4.61e-141 | 409 |
| MS.gene56347.t1 | AT5G13940 | 45.946 | 74 | 24 | 1 | 275 | 348 | 11 | 68 | 3.30e-13 | 72.0 |
| MS.gene56347.t1 | AT5G13940 | 45.946 | 74 | 24 | 1 | 275 | 348 | 162 | 219 | 4.04e-13 | 72.0 |
Find 101 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCATAGCAATGCTTTC+TGG | 0.080739 | 3.1:+6732624 | MS.gene56347:CDS |
| CTTAATAGATCTTCTCATTA+TGG | 0.133209 | 3.1:+6732029 | MS.gene56347:intron |
| TGGGGCATGGGTTTAATAAT+TGG | 0.228616 | 3.1:+6730540 | MS.gene56347:CDS |
| TTTAATAATTGGACCAGCTT+TGG | 0.229899 | 3.1:+6730551 | MS.gene56347:CDS |
| CAATAATCCTGAAGGCTTAT+AGG | 0.258056 | 3.1:+6733370 | MS.gene56347:intron |
| TTAATAATTGGACCAGCTTT+GGG | 0.266422 | 3.1:+6730552 | MS.gene56347:CDS |
| GAATCCTTTGGAAATAGATT+TGG | 0.269266 | 3.1:-6730887 | None:intergenic |
| TTAATAGATCTTCTCATTAT+GGG | 0.296541 | 3.1:+6732030 | MS.gene56347:intron |
| CACAACAATAGATGACATTA+AGG | 0.296857 | 3.1:-6731690 | None:intergenic |
| CTTTCCATACCTATATTTCA+TGG | 0.306308 | 3.1:+6729170 | MS.gene56347:CDS |
| CGGTAGTAATTGCCTGCATC+TGG | 0.308405 | 3.1:+6731083 | MS.gene56347:CDS |
| AAAATGGAAGATGGAAATAT+TGG | 0.310584 | 3.1:+6728770 | None:intergenic |
| AAGAAATAAACCAGTGATTA+TGG | 0.311778 | 3.1:-6732977 | None:intergenic |
| GAAATGGAAGGCAAGAAATA+TGG | 0.321659 | 3.1:-6731040 | None:intergenic |
| TTCGAAATCTCTTGAACATA+TGG | 0.324637 | 3.1:+6728879 | MS.gene56347:CDS |
| TATTTCCAAAGGATTCCTTT+TGG | 0.332250 | 3.1:+6730894 | MS.gene56347:CDS |
| TTCAAACCACCTAACCTTCT+AGG | 0.336667 | 3.1:-6732061 | None:intergenic |
| AATCCTTTGGAAATAGATTT+GGG | 0.340594 | 3.1:-6730886 | None:intergenic |
| GCTTTAGAAACTGGAAGAAA+TGG | 0.345551 | 3.1:+6731611 | MS.gene56347:CDS |
| GTAAGATTTGCTCGCATCTC+CGG | 0.354320 | 3.1:+6732478 | MS.gene56347:CDS |
| TTCAGTGCAGCTTGGGGCAT+GGG | 0.362285 | 3.1:+6730528 | MS.gene56347:CDS |
| CGAGAAGAAAAGCAAGCTCT+TGG | 0.364652 | 3.1:+6730194 | MS.gene56347:CDS |
| GAGATGCGAGCAAATCTTAC+AGG | 0.370847 | 3.1:-6732475 | None:intergenic |
| GGTGATGTTCTTGCAATATC+AGG | 0.378966 | 3.1:+6732103 | MS.gene56347:CDS |
| ATGAAAACCTCTTCCTAAAC+TGG | 0.393957 | 3.1:+6731666 | MS.gene56347:CDS |
| ATTTCAGTTCAGTGCAGCTT+GGG | 0.399921 | 3.1:+6730521 | MS.gene56347:intron |
| AATTGCCTGCATCTGGCTTC+CGG | 0.400402 | 3.1:+6731090 | MS.gene56347:CDS |
| TTGTCCCAAAAGGAATCCTT+TGG | 0.400863 | 3.1:-6730899 | None:intergenic |
| TTAAACTTACCATGAAATAT+AGG | 0.402640 | 3.1:-6729179 | None:intergenic |
| GATGCTGAAGCTTTAGAAAC+TGG | 0.405641 | 3.1:+6731602 | MS.gene56347:CDS |
| ATGACATTAAGGGCCAGTTT+AGG | 0.411844 | 3.1:-6731679 | None:intergenic |
| TAAGATTTGCTCGCATCTCC+GGG | 0.414274 | 3.1:+6732479 | MS.gene56347:CDS |
| GTGTTGATTGGTACCTTCAT+TGG | 0.414762 | 3.1:-6730043 | None:intergenic |
| TTCAAAACAATTGGTCCAGC+TGG | 0.422073 | 3.1:+6733171 | MS.gene56347:CDS |
| TGCAAAAGCTGATATTGAAA+TGG | 0.424887 | 3.1:-6731056 | None:intergenic |
| GGATGTTTAAATGGTTTGCT+TGG | 0.432632 | 3.1:+6730019 | MS.gene56347:CDS |
| GTTCAGTGCAGCTTGGGGCA+TGG | 0.433976 | 3.1:+6730527 | MS.gene56347:intron |
| TCCAGAAAGCATTGCTATGA+AGG | 0.448179 | 3.1:-6732625 | None:intergenic |
| GATCTTTGACATCAATATCA+TGG | 0.448413 | 3.1:+6729535 | MS.gene56347:CDS |
| TAAAGCTTCAGCATCATCAA+TGG | 0.462778 | 3.1:-6731594 | None:intergenic |
| ATGTCAATATTCAAAACAAT+TGG | 0.466702 | 3.1:+6733162 | MS.gene56347:CDS |
| TATGGAAAGAGAGATGATAT+AGG | 0.473840 | 3.1:-6729156 | None:intergenic |
| CACACTGCACCACCTCCAGC+TGG | 0.476747 | 3.1:-6733186 | None:intergenic |
| ATCTTTGACATCAATATCAT+GGG | 0.481621 | 3.1:+6729536 | MS.gene56347:CDS |
| CGTCAAAGAGGAGCAGCTAA+TGG | 0.482536 | 3.1:+6733123 | MS.gene56347:CDS |
| GATTTCAGTTCAGTGCAGCT+TGG | 0.482930 | 3.1:+6730520 | MS.gene56347:intron |
| AAGGGGTAACTTTGCAAAAG+AGG | 0.484476 | 3.1:-6732606 | None:intergenic |
| GTTTATTATAATATTAGTCT+AGG | 0.486349 | 3.1:-6733393 | None:intergenic |
| TGGTTTGCTTGGACCAATGA+AGG | 0.487662 | 3.1:+6730030 | MS.gene56347:CDS |
| CTTTAGAAACTGGAAGAAAT+GGG | 0.487764 | 3.1:+6731612 | MS.gene56347:CDS |
| TATGGGCGGTGAGTCCTAGA+AGG | 0.488224 | 3.1:+6732047 | MS.gene56347:CDS |
| CAAAGACAAGATAATCCAAA+AGG | 0.500769 | 3.1:+6731643 | MS.gene56347:CDS |
| GCGGTGAGTCCTAGAAGGTT+AGG | 0.507497 | 3.1:+6732052 | MS.gene56347:CDS |
| ACTGGAAGAAATGGGAAAGC+AGG | 0.507810 | 3.1:+6731620 | MS.gene56347:CDS |
| ACATTACACAACCACCCTCT+TGG | 0.508399 | 3.1:+6731563 | MS.gene56347:CDS |
| AAGTGCTTATGCTGGTTATG+TGG | 0.512014 | 3.1:+6729395 | MS.gene56347:CDS |
| ATTCACTTACTTGTCCCAAA+AGG | 0.515012 | 3.1:-6730909 | None:intergenic |
| GCTAATGGCATTGCTATGAC+TGG | 0.516266 | 3.1:+6733138 | MS.gene56347:CDS |
| CACTTAGAAGATTCTTCAGA+AGG | 0.517500 | 3.1:-6732680 | None:intergenic |
| TAATAATTGGACCAGCTTTG+GGG | 0.519154 | 3.1:+6730553 | MS.gene56347:CDS |
| GTAACTTTGCAAAAGAGGTA+TGG | 0.520424 | 3.1:-6732601 | None:intergenic |
| ACAACAATAGATGACATTAA+GGG | 0.521167 | 3.1:-6731689 | None:intergenic |
| ATGATGGGTATAGGGAAAGC+TGG | 0.534277 | 3.1:-6732435 | None:intergenic |
| TTTCAGGTGACCATAATCAC+TGG | 0.539650 | 3.1:+6732967 | MS.gene56347:intron |
| AAGTACTATGACAATTGTCC+TGG | 0.541237 | 3.1:+6728812 | MS.gene56347:CDS |
| CAATGGACTCATTGCCAAGA+GGG | 0.541868 | 3.1:-6731577 | None:intergenic |
| CTTACCATGAAATATAGGTA+TGG | 0.543067 | 3.1:-6729174 | None:intergenic |
| TTATGATATTTCTTATCAAG+AGG | 0.544878 | 3.1:+6731730 | MS.gene56347:CDS |
| TTAAGGGCCAGTTTAGGAAG+AGG | 0.546629 | 3.1:-6731673 | None:intergenic |
| ACATACCGGAAGCCAGATGC+AGG | 0.551614 | 3.1:-6731095 | None:intergenic |
| GTAGGATCTGCATTCATGCT+TGG | 0.560726 | 3.1:+6729510 | MS.gene56347:intron |
| AACTTCACAACTGAAAATGT+TGG | 0.560964 | 3.1:+6732082 | MS.gene56347:CDS |
| ATAATCCCTAAAATTGCCAC+AGG | 0.565902 | 3.1:-6729588 | None:intergenic |
| GGGAAGCAATATTAATCACT+AGG | 0.567739 | 3.1:-6732659 | None:intergenic |
| ATACCCAAATCTATTTCCAA+AGG | 0.569665 | 3.1:+6730883 | MS.gene56347:CDS |
| ACAATTGGTCCAGCTGGAGG+TGG | 0.572042 | 3.1:+6733177 | MS.gene56347:CDS |
| AAAGCTGATATTGAAATGGA+AGG | 0.572666 | 3.1:-6731052 | None:intergenic |
| CCAGAAAGCATTGCTATGAA+GGG | 0.575436 | 3.1:-6732624 | None:intergenic |
| GGAATCATAGCAGATCGTTA+CGG | 0.581193 | 3.1:+6729558 | MS.gene56347:CDS |
| AATAATTGGACCAGCTTTGG+GGG | 0.584671 | 3.1:+6730554 | MS.gene56347:CDS |
| AGCAAATCTTACAGGTCCAA+AGG | 0.586458 | 3.1:-6732467 | None:intergenic |
| AAATCTCTTGAACATATGGA+TGG | 0.593890 | 3.1:+6728883 | MS.gene56347:CDS |
| GAGGACATAAGTGCTTATGC+TGG | 0.604864 | 3.1:+6729387 | MS.gene56347:CDS |
| CAGAAAGCATTGCTATGAAG+GGG | 0.615996 | 3.1:-6732623 | None:intergenic |
| TTTCAGTTCAGTGCAGCTTG+GGG | 0.620914 | 3.1:+6730522 | MS.gene56347:intron |
| TCTCTTGAACATATGGATGG+TGG | 0.621234 | 3.1:+6728886 | MS.gene56347:CDS |
| GCTTTGTCAACTTTACAACC+AGG | 0.622810 | 3.1:-6728830 | None:intergenic |
| ACTTAGAAGATTCTTCAGAA+GGG | 0.622991 | 3.1:-6732679 | None:intergenic |
| TCTTATGCAAAATAGAGCTG+TGG | 0.626847 | 3.1:+6732996 | MS.gene56347:CDS |
| AAAACAATTGGTCCAGCTGG+AGG | 0.629594 | 3.1:+6733174 | MS.gene56347:CDS |
| AGTGCTTATGCTGGTTATGT+GGG | 0.629937 | 3.1:+6729396 | MS.gene56347:CDS |
| GTGAGTCCTAGAAGGTTAGG+TGG | 0.634850 | 3.1:+6732055 | MS.gene56347:CDS |
| GAACAGGAACAACGTCAAAG+AGG | 0.640183 | 3.1:+6733111 | MS.gene56347:intron |
| ATAGATCTTCTCATTATGGG+CGG | 0.644908 | 3.1:+6732033 | MS.gene56347:intron |
| TGGACTCATTGCCAAGAGGG+TGG | 0.655428 | 3.1:-6731574 | None:intergenic |
| ATAATTGGACCAGCTTTGGG+GGG | 0.656440 | 3.1:+6730555 | MS.gene56347:CDS |
| TTTGGATGGCCGTTACAACG+CGG | 0.675301 | 3.1:+6729987 | MS.gene56347:CDS |
| TCGTTACGGTAGAAAACCTG+TGG | 0.693560 | 3.1:+6729572 | MS.gene56347:CDS |
| TCTTTGACATCAATATCATG+GGG | 0.702667 | 3.1:+6729537 | MS.gene56347:CDS |
| TCAATGGACTCATTGCCAAG+AGG | 0.702775 | 3.1:-6731578 | None:intergenic |
| AAGATTTGCTCGCATCTCCG+GGG | 0.729111 | 3.1:+6732480 | MS.gene56347:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATAGAAATTATATTGA+TGG | - | chr3.1:6731520-6731539 | None:intergenic | 10.0% |
| !!! | AAATATATAATCTTAACTTT+TGG | - | chr3.1:6733054-6733073 | None:intergenic | 10.0% |
| !!! | TTAAATTTTAACAATTTAGT+TGG | + | chr3.1:6730953-6730972 | MS.gene56347:intron | 10.0% |
| !! | AAGAGAATAATAAATCATTA+GGG | - | chr3.1:6732153-6732172 | None:intergenic | 15.0% |
| !! | ATAAACTAACTTTATTAAGT+AGG | - | chr3.1:6731763-6731782 | None:intergenic | 15.0% |
| !! | TAAGAGAATAATAAATCATT+AGG | - | chr3.1:6732154-6732173 | None:intergenic | 15.0% |
| !! | TAATGATTTATTATTCTCTT+AGG | + | chr3.1:6732153-6732172 | MS.gene56347:intron | 15.0% |
| !! | TTAATTAGAATAACACATAA+CGG | - | chr3.1:6731953-6731972 | None:intergenic | 15.0% |
| !!! | AGTTAAGATTATATATTTTG+AGG | + | chr3.1:6733056-6733075 | MS.gene56347:intron | 15.0% |
| !!! | TCATTTGTATATTTTGATAT+CGG | + | chr3.1:6730118-6730137 | MS.gene56347:intron | 15.0% |
| !! | AACTATAAAAGACATTATCT+AGG | - | chr3.1:6730375-6730394 | None:intergenic | 20.0% |
| !! | ATAAGTAAAATAAAAGCTAG+AGG | - | chr3.1:6733227-6733246 | None:intergenic | 20.0% |
| !! | ATCAAGTTATGAATCAAATT+GGG | - | chr3.1:6730683-6730702 | None:intergenic | 20.0% |
| !! | ATGTCAATATTCAAAACAAT+TGG | + | chr3.1:6733162-6733181 | MS.gene56347:CDS | 20.0% |
| !! | TATGTTTGAATATACAAGTA+GGG | - | chr3.1:6730776-6730795 | None:intergenic | 20.0% |
| !! | TTAAACTTACCATGAAATAT+AGG | - | chr3.1:6729182-6729201 | None:intergenic | 20.0% |
| !! | TTAATAGATCTTCTCATTAT+GGG | + | chr3.1:6732030-6732049 | MS.gene56347:intron | 20.0% |
| !! | TTATGATATTTCTTATCAAG+AGG | + | chr3.1:6731730-6731749 | MS.gene56347:CDS | 20.0% |
| !!! | AGATCTATTTTCATTACAAA+AGG | - | chr3.1:6730613-6730632 | None:intergenic | 20.0% |
| !!! | TATATATTTTGAGGAAATTG+TGG | + | chr3.1:6733065-6733084 | MS.gene56347:intron | 20.0% |
| !!! | TTTTAATATTGCAAAAAGAG+AGG | + | chr3.1:6729365-6729384 | MS.gene56347:CDS | 20.0% |
| !!! | TTTTTTCTTGGATGTTTAAA+TGG | + | chr3.1:6730010-6730029 | MS.gene56347:CDS | 20.0% |
| ! | AACATATTCACAGTCATATT+AGG | - | chr3.1:6729490-6729509 | None:intergenic | 25.0% |
| ! | AAGAAATAAACCAGTGATTA+TGG | - | chr3.1:6732980-6732999 | None:intergenic | 25.0% |
| ! | ACAACAATAGATGACATTAA+GGG | - | chr3.1:6731692-6731711 | None:intergenic | 25.0% |
| ! | AGATCTATTAAGAAGTAGAA+TGG | - | chr3.1:6732021-6732040 | None:intergenic | 25.0% |
| ! | AGCCAATTTATATATACTCA+AGG | - | chr3.1:6730413-6730432 | None:intergenic | 25.0% |
| ! | ATACTGTTCACATTAAATGT+TGG | - | chr3.1:6729327-6729346 | None:intergenic | 25.0% |
| ! | ATCTTTGACATCAATATCAT+GGG | + | chr3.1:6729536-6729555 | MS.gene56347:CDS | 25.0% |
| ! | ATGAAGATAAAACACATCAA+AGG | - | chr3.1:6729449-6729468 | None:intergenic | 25.0% |
| ! | ATTATAACTTAACCTAGACT+AGG | + | chr3.1:6732885-6732904 | MS.gene56347:intron | 25.0% |
| ! | CATCAAGTTATGAATCAAAT+TGG | - | chr3.1:6730684-6730703 | None:intergenic | 25.0% |
| ! | CTAACTTTATTAAGTAGGAA+TGG | - | chr3.1:6731758-6731777 | None:intergenic | 25.0% |
| ! | CTATGTTTGAATATACAAGT+AGG | - | chr3.1:6730777-6730796 | None:intergenic | 25.0% |
| ! | CTTAATAGATCTTCTCATTA+TGG | + | chr3.1:6732029-6732048 | MS.gene56347:intron | 25.0% |
| ! | GGAATATATAGTGTAACTTT+AGG | + | chr3.1:6732209-6732228 | MS.gene56347:intron | 25.0% |
| ! | TAGTATTACAATAATCCTGA+AGG | + | chr3.1:6733362-6733381 | MS.gene56347:intron | 25.0% |
| ! | TCAAAACATAATATTGTTGC+AGG | + | chr3.1:6731014-6731033 | MS.gene56347:intron | 25.0% |
| ! | TCTTTCATTGTTACAAATTG+TGG | + | chr3.1:6733246-6733265 | MS.gene56347:intron | 25.0% |
| ! | TCTTTGATCATGACATATAT+AGG | - | chr3.1:6730730-6730749 | None:intergenic | 25.0% |
| ! | TGCCTTGAGTATATATAAAT+TGG | + | chr3.1:6730408-6730427 | MS.gene56347:intron | 25.0% |
| ! | TGTTGAAGGATGAAAAATTT+AGG | - | chr3.1:6730076-6730095 | None:intergenic | 25.0% |
| !! | AAGACTTTGAGTTATGATTA+TGG | - | chr3.1:6732273-6732292 | None:intergenic | 25.0% |
| !! | AATCCTTTGGAAATAGATTT+GGG | - | chr3.1:6730889-6730908 | None:intergenic | 25.0% |
| !! | ATCATTTTCAACACACTATT+TGG | + | chr3.1:6729950-6729969 | MS.gene56347:CDS | 25.0% |
| !! | TAGATTTTGGACTTAGAAAA+TGG | + | chr3.1:6730645-6730664 | MS.gene56347:intron | 25.0% |
| !! | TTAGGTATTATTGTGTTGAT+TGG | - | chr3.1:6730058-6730077 | None:intergenic | 25.0% |
| !! | TTTGAGTTATGATTATGGTT+TGG | - | chr3.1:6732268-6732287 | None:intergenic | 25.0% |
| !! | TTTGTGACATTCTTATTTCT+TGG | + | chr3.1:6729231-6729250 | MS.gene56347:intron | 25.0% |
| !!! | AAAGAGAATTGAGTTGATTT+TGG | - | chr3.1:6731295-6731314 | None:intergenic | 25.0% |
| !!! | ATCTAAAGTTTGCTACATTT+TGG | + | chr3.1:6729291-6729310 | MS.gene56347:intron | 25.0% |
| !!! | CAAAGGTTTTTTCTAATGAT+GGG | - | chr3.1:6732453-6732472 | None:intergenic | 25.0% |
| !!! | CTAAGTATTGAAGTTATAAG+AGG | - | chr3.1:6732318-6732337 | None:intergenic | 25.0% |
| !!! | CTATATCATTGATTTTGATG+TGG | + | chr3.1:6731195-6731214 | MS.gene56347:intron | 25.0% |
| !!! | TTGAGAATAGTCTTAGATTT+TGG | + | chr3.1:6730632-6730651 | MS.gene56347:intron | 25.0% |
| !!! | TTTTTCTAATGATGGGTATA+GGG | - | chr3.1:6732446-6732465 | None:intergenic | 25.0% |
| !!! | TTTTTTCTAATGATGGGTAT+AGG | - | chr3.1:6732447-6732466 | None:intergenic | 25.0% |
| AAAGCTGATATTGAAATGGA+AGG | - | chr3.1:6731055-6731074 | None:intergenic | 30.0% | |
| AAATCTCTTGAACATATGGA+TGG | + | chr3.1:6728883-6728902 | MS.gene56347:CDS | 30.0% | |
| AACTTCACAACTGAAAATGT+TGG | + | chr3.1:6732082-6732101 | MS.gene56347:CDS | 30.0% | |
| ACTTAGAAGATTCTTCAGAA+GGG | - | chr3.1:6732682-6732701 | None:intergenic | 30.0% | |
| ATAAAAAGGGAAGTAAAAGC+AGG | - | chr3.1:6731462-6731481 | None:intergenic | 30.0% | |
| ATACCCAAATCTATTTCCAA+AGG | + | chr3.1:6730883-6730902 | MS.gene56347:CDS | 30.0% | |
| ATACGTGCTTATAGAAGAAA+AGG | - | chr3.1:6731810-6731829 | None:intergenic | 30.0% | |
| ATGTATAGTGAGAATACGAT+AGG | + | chr3.1:6730701-6730720 | MS.gene56347:intron | 30.0% | |
| ATGTGGTATCAGTAAAAGTA+GGG | + | chr3.1:6731212-6731231 | MS.gene56347:intron | 30.0% | |
| ATTGAAGTTATAAGAGGAAG+AGG | - | chr3.1:6732312-6732331 | None:intergenic | 30.0% | |
| CAAAGACAAGATAATCCAAA+AGG | + | chr3.1:6731643-6731662 | MS.gene56347:CDS | 30.0% | |
| CAACCATTTATGCTAAACTT+AGG | + | chr3.1:6731154-6731173 | MS.gene56347:intron | 30.0% | |
| CACAACAATAGATGACATTA+AGG | - | chr3.1:6731693-6731712 | None:intergenic | 30.0% | |
| CATCATCATCAATGATGTAA+TGG | - | chr3.1:6729911-6729930 | None:intergenic | 30.0% | |
| CCATCATTAGAAAAAACCTT+TGG | + | chr3.1:6732451-6732470 | MS.gene56347:CDS | 30.0% | |
| CTACCTAAGTTTAGCATAAA+TGG | - | chr3.1:6731160-6731179 | None:intergenic | 30.0% | |
| CTTACCATGAAATATAGGTA+TGG | - | chr3.1:6729177-6729196 | None:intergenic | 30.0% | |
| CTTTCCATACCTATATTTCA+TGG | + | chr3.1:6729170-6729189 | MS.gene56347:CDS | 30.0% | |
| GAGAAAATAATCTCATGTGT+TGG | + | chr3.1:6731875-6731894 | MS.gene56347:intron | 30.0% | |
| GATCTTTGACATCAATATCA+TGG | + | chr3.1:6729535-6729554 | MS.gene56347:CDS | 30.0% | |
| GCTTACCTAATTGTATTACT+TGG | + | chr3.1:6732939-6732958 | MS.gene56347:intron | 30.0% | |
| GTTATGAATCAAATTGGGAA+TGG | - | chr3.1:6730678-6730697 | None:intergenic | 30.0% | |
| TAAAAAGGGAAGTAAAAGCA+GGG | - | chr3.1:6731461-6731480 | None:intergenic | 30.0% | |
| TAAGCTATCATCGAAACTTA+TGG | - | chr3.1:6729761-6729780 | None:intergenic | 30.0% | |
| TAATATTGCAAAAAGAGAGG+AGG | + | chr3.1:6729368-6729387 | MS.gene56347:CDS | 30.0% | |
| TACATGTCAATATGTCATTG+AGG | + | chr3.1:6729624-6729643 | MS.gene56347:intron | 30.0% | |
| TACGTGCTTATAGAAGAAAA+GGG | - | chr3.1:6731809-6731828 | None:intergenic | 30.0% | |
| TATGACTGTGAATATGTTGT+AGG | + | chr3.1:6729492-6729511 | MS.gene56347:intron | 30.0% | |
| TATGGAAAGAGAGATGATAT+AGG | - | chr3.1:6729159-6729178 | None:intergenic | 30.0% | |
| TATTGTTAGAATCCTAGTCT+AGG | - | chr3.1:6732900-6732919 | None:intergenic | 30.0% | |
| TCAAACATGACATTAACATG+TGG | - | chr3.1:6730323-6730342 | None:intergenic | 30.0% | |
| TCTCTTACTTAATCAGAACT+AGG | + | chr3.1:6732188-6732207 | MS.gene56347:intron | 30.0% | |
| TCTTTGACATCAATATCATG+GGG | + | chr3.1:6729537-6729556 | MS.gene56347:CDS | 30.0% | |
| TGCAAAAGCTGATATTGAAA+TGG | - | chr3.1:6731059-6731078 | None:intergenic | 30.0% | |
| TTAACTAAAGAGAGCGAATA+CGG | + | chr3.1:6729881-6729900 | MS.gene56347:intron | 30.0% | |
| TTAATAATTGGACCAGCTTT+GGG | + | chr3.1:6730552-6730571 | MS.gene56347:CDS | 30.0% | |
| TTCGAAATCTCTTGAACATA+TGG | + | chr3.1:6728879-6728898 | MS.gene56347:CDS | 30.0% | |
| TTGAAGTTATAAGAGGAAGA+GGG | - | chr3.1:6732311-6732330 | None:intergenic | 30.0% | |
| TTTAATAATTGGACCAGCTT+TGG | + | chr3.1:6730551-6730570 | MS.gene56347:CDS | 30.0% | |
| ! | AATATCAGCTTTTGCATTTG+CGG | + | chr3.1:6731063-6731082 | MS.gene56347:CDS | 30.0% |
| ! | AGATTTGGGTATTTTACAGT+TGG | - | chr3.1:6730875-6730894 | None:intergenic | 30.0% |
| ! | ATTTCCAAAGGATTCCTTTT+GGG | + | chr3.1:6730895-6730914 | MS.gene56347:CDS | 30.0% |
| ! | CTTTAGAAACTGGAAGAAAT+GGG | + | chr3.1:6731612-6731631 | MS.gene56347:CDS | 30.0% |
| ! | GAATCCTTTGGAAATAGATT+TGG | - | chr3.1:6730890-6730909 | None:intergenic | 30.0% |
| ! | TATGTCATTGAGGTTTTCTT+CGG | + | chr3.1:6729634-6729653 | MS.gene56347:intron | 30.0% |
| ! | TATTTCCAAAGGATTCCTTT+TGG | + | chr3.1:6730894-6730913 | MS.gene56347:CDS | 30.0% |
| !! | GCTATTTTGTTACCTTATGT+AGG | + | chr3.1:6732572-6732591 | MS.gene56347:intron | 30.0% |
| !!! | CCAAAGGTTTTTTCTAATGA+TGG | - | chr3.1:6732454-6732473 | None:intergenic | 30.0% |
| !!! | TATGTTTTGACAATGACAGT+CGG | - | chr3.1:6731004-6731023 | None:intergenic | 30.0% |
| AAGAAAAAACCGCGTTGTAA+CGG | - | chr3.1:6729999-6730018 | None:intergenic | 35.0% | |
| AAGTACTATGACAATTGTCC+TGG | + | chr3.1:6728812-6728831 | MS.gene56347:CDS | 35.0% | |
| AATGATCAATGGTCAGGTAT+TGG | + | chr3.1:6732400-6732419 | MS.gene56347:intron | 35.0% | |
| ACCTAATTGTATTACTTGGC+TGG | + | chr3.1:6732943-6732962 | MS.gene56347:intron | 35.0% | |
| AGCTCTTCTCAAATGATCAA+TGG | + | chr3.1:6732389-6732408 | MS.gene56347:intron | 35.0% | |
| AGTAAGCCTGTTATCAGAAA+AGG | - | chr3.1:6730160-6730179 | None:intergenic | 35.0% | |
| ATAATCCCTAAAATTGCCAC+AGG | - | chr3.1:6729591-6729610 | None:intergenic | 35.0% | |
| ATAGATCTTCTCATTATGGG+CGG | + | chr3.1:6732033-6732052 | MS.gene56347:intron | 35.0% | |
| ATGAAAACCTCTTCCTAAAC+TGG | + | chr3.1:6731666-6731685 | MS.gene56347:CDS | 35.0% | |
| ATTCACTTACTTGTCCCAAA+AGG | - | chr3.1:6730912-6730931 | None:intergenic | 35.0% | |
| CAATAATCCTGAAGGCTTAT+AGG | + | chr3.1:6733370-6733389 | MS.gene56347:intron | 35.0% | |
| CACTTAGAAGATTCTTCAGA+AGG | - | chr3.1:6732683-6732702 | None:intergenic | 35.0% | |
| GAAACTGCATCACTAATGAT+TGG | - | chr3.1:6732733-6732752 | None:intergenic | 35.0% | |
| GAAATGGAAGGCAAGAAATA+TGG | - | chr3.1:6731043-6731062 | None:intergenic | 35.0% | |
| GATGTGGTATCAGTAAAAGT+AGG | + | chr3.1:6731211-6731230 | MS.gene56347:intron | 35.0% | |
| GGGAAGCAATATTAATCACT+AGG | - | chr3.1:6732662-6732681 | None:intergenic | 35.0% | |
| GTAACTTTGCAAAAGAGGTA+TGG | - | chr3.1:6732604-6732623 | None:intergenic | 35.0% | |
| GTATGGATAACACCTACATA+AGG | - | chr3.1:6732587-6732606 | None:intergenic | 35.0% | |
| GTCCAATCAGATATACATAC+CGG | - | chr3.1:6731112-6731131 | None:intergenic | 35.0% | |
| GTTGCATTAACCACTATGAA+TGG | - | chr3.1:6732516-6732535 | None:intergenic | 35.0% | |
| TAAAGCTTCAGCATCATCAA+TGG | - | chr3.1:6731597-6731616 | None:intergenic | 35.0% | |
| TAAGATTTCGCCATTCATAG+TGG | + | chr3.1:6732503-6732522 | MS.gene56347:intron | 35.0% | |
| TAATAATTGGACCAGCTTTG+GGG | + | chr3.1:6730553-6730572 | MS.gene56347:CDS | 35.0% | |
| TCCAGCCAAGTAATACAATT+AGG | - | chr3.1:6732947-6732966 | None:intergenic | 35.0% | |
| TCTTATGCAAAATAGAGCTG+TGG | + | chr3.1:6732996-6733015 | MS.gene56347:CDS | 35.0% | |
| TGAGGAAATTGTGGCATAAA+TGG | + | chr3.1:6733074-6733093 | MS.gene56347:intron | 35.0% | |
| TGATTGCTCATTGATGTTGA+AGG | - | chr3.1:6730090-6730109 | None:intergenic | 35.0% | |
| TTCCGGTATGTATATCTGAT+TGG | + | chr3.1:6731107-6731126 | MS.gene56347:intron | 35.0% | |
| TTCTCAAATGATCAATGGTC+AGG | + | chr3.1:6732394-6732413 | MS.gene56347:intron | 35.0% | |
| ! | AATAGAGCTGTGGTAATGTT+TGG | + | chr3.1:6733006-6733025 | MS.gene56347:intron | 35.0% |
| ! | AGAAAACCTGTGGCAATTTT+AGG | + | chr3.1:6729582-6729601 | MS.gene56347:CDS | 35.0% |
| ! | GAAAACCTGTGGCAATTTTA+GGG | + | chr3.1:6729583-6729602 | MS.gene56347:CDS | 35.0% |
| ! | GCATAAATGGCATGTTGATT+TGG | + | chr3.1:6733087-6733106 | MS.gene56347:intron | 35.0% |
| ! | GGAAGTTTTTCTGACACAAT+AGG | + | chr3.1:6729252-6729271 | MS.gene56347:intron | 35.0% |
| ! | TCACATCCTTTTCTGATAAC+AGG | + | chr3.1:6730151-6730170 | MS.gene56347:intron | 35.0% |
| !! | GCTTTAGAAACTGGAAGAAA+TGG | + | chr3.1:6731611-6731630 | MS.gene56347:CDS | 35.0% |
| !! | GGATGTTTAAATGGTTTGCT+TGG | + | chr3.1:6730019-6730038 | MS.gene56347:CDS | 35.0% |
| !! | GGCAATTTTAGGGATTATCT+CGG | + | chr3.1:6729593-6729612 | MS.gene56347:CDS | 35.0% |
| AAGGGGTAACTTTGCAAAAG+AGG | - | chr3.1:6732609-6732628 | None:intergenic | 40.0% | |
| AATCTTTGTCCGACACCTAT+AGG | + | chr3.1:6730239-6730258 | MS.gene56347:intron | 40.0% | |
| AGCAAATCTTACAGGTCCAA+AGG | - | chr3.1:6732470-6732489 | None:intergenic | 40.0% | |
| ATCTTTGTCCGACACCTATA+GGG | + | chr3.1:6730240-6730259 | MS.gene56347:intron | 40.0% | |
| ATGACATTAAGGGCCAGTTT+AGG | - | chr3.1:6731682-6731701 | None:intergenic | 40.0% | |
| ATTTCAGTTCAGTGCAGCTT+GGG | + | chr3.1:6730521-6730540 | MS.gene56347:intron | 40.0% | |
| CCATCCAAAAACTTGTGCTA+AGG | - | chr3.1:6729976-6729995 | None:intergenic | 40.0% | |
| CGGAACATCAACAATATGCT+TGG | - | chr3.1:6730984-6731003 | None:intergenic | 40.0% | |
| GCTTTGTCAACTTTACAACC+AGG | - | chr3.1:6728833-6728852 | None:intergenic | 40.0% | |
| GGAATCATAGCAGATCGTTA+CGG | + | chr3.1:6729558-6729577 | MS.gene56347:CDS | 40.0% | |
| GGACTGTTTGAGAGATCTTA+TGG | + | chr3.1:6729695-6729714 | MS.gene56347:intron | 40.0% | |
| GGTGATGTTCTTGCAATATC+AGG | + | chr3.1:6732103-6732122 | MS.gene56347:CDS | 40.0% | |
| GTATTACTTGGCTGGATTTC+AGG | + | chr3.1:6732951-6732970 | MS.gene56347:intron | 40.0% | |
| TCTATTCACATGACACTCGT+AGG | + | chr3.1:6729674-6729693 | MS.gene56347:intron | 40.0% | |
| TCTCTTGAACATATGGATGG+TGG | + | chr3.1:6728886-6728905 | MS.gene56347:CDS | 40.0% | |
| TGCTTGTATCTGAACCAAAG+AGG | - | chr3.1:6731271-6731290 | None:intergenic | 40.0% | |
| TGGGGCATGGGTTTAATAAT+TGG | + | chr3.1:6730540-6730559 | MS.gene56347:CDS | 40.0% | |
| TTCAAAACAATTGGTCCAGC+TGG | + | chr3.1:6733171-6733190 | MS.gene56347:CDS | 40.0% | |
| TTCAAACCACCTAACCTTCT+AGG | - | chr3.1:6732064-6732083 | None:intergenic | 40.0% | |
| TTGACACACGTGGTTACATT+CGG | + | chr3.1:6730265-6730284 | MS.gene56347:intron | 40.0% | |
| TTGTCCCAAAAGGAATCCTT+TGG | - | chr3.1:6730902-6730921 | None:intergenic | 40.0% | |
| ! | AAGTGCTTATGCTGGTTATG+TGG | + | chr3.1:6729395-6729414 | MS.gene56347:CDS | 40.0% |
| ! | AATAATTGGACCAGCTTTGG+GGG | + | chr3.1:6730554-6730573 | MS.gene56347:CDS | 40.0% |
| ! | ACGCTTTCTATCTGAAGTGT+CGG | + | chr3.1:6731908-6731927 | MS.gene56347:intron | 40.0% |
| ! | AGTGCTTATGCTGGTTATGT+GGG | + | chr3.1:6729396-6729415 | MS.gene56347:CDS | 40.0% |
| ! | GGAAGAGGTTTTCATCCTTT+TGG | - | chr3.1:6731661-6731680 | None:intergenic | 40.0% |
| ! | TTTCAGGTGACCATAATCAC+TGG | + | chr3.1:6732967-6732986 | MS.gene56347:intron | 40.0% |
| ! | TTTTCGCGTGCGCATAAAAA+GGG | - | chr3.1:6731322-6731341 | None:intergenic | 40.0% |
| ! | TTTTTCGCGTGCGCATAAAA+AGG | - | chr3.1:6731323-6731342 | None:intergenic | 40.0% |
| !! | AGTTCTCTGAGATTCCTCTT+TGG | + | chr3.1:6731254-6731273 | MS.gene56347:intron | 40.0% |
| !! | CAGAAAGCATTGCTATGAAG+GGG | - | chr3.1:6732626-6732645 | None:intergenic | 40.0% |
| !! | CCAGAAAGCATTGCTATGAA+GGG | - | chr3.1:6732627-6732646 | None:intergenic | 40.0% |
| !! | CCTTAGCACAAGTTTTTGGA+TGG | + | chr3.1:6729973-6729992 | MS.gene56347:CDS | 40.0% |
| !! | GATGCTGAAGCTTTAGAAAC+TGG | + | chr3.1:6731602-6731621 | MS.gene56347:CDS | 40.0% |
| !! | GTGTTGATTGGTACCTTCAT+TGG | - | chr3.1:6730046-6730065 | None:intergenic | 40.0% |
| !! | TCCAGAAAGCATTGCTATGA+AGG | - | chr3.1:6732628-6732647 | None:intergenic | 40.0% |
| !!! | GTTACAACGCGGTTTTTTCT+TGG | + | chr3.1:6729998-6730017 | MS.gene56347:CDS | 40.0% |
| !!! | TTGGCCTTAGCACAAGTTTT+TGG | + | chr3.1:6729969-6729988 | MS.gene56347:CDS | 40.0% |
| AAAACAATTGGTCCAGCTGG+AGG | + | chr3.1:6733174-6733193 | MS.gene56347:CDS | 45.0% | |
| ACATTACACAACCACCCTCT+TGG | + | chr3.1:6731563-6731582 | MS.gene56347:CDS | 45.0% | |
| ACTGGAAGAAATGGGAAAGC+AGG | + | chr3.1:6731620-6731639 | MS.gene56347:CDS | 45.0% | |
| AGGCAGAATGAATCGCAAGA+TGG | - | chr3.1:6732822-6732841 | None:intergenic | 45.0% | |
| CCCTTCATAGCAATGCTTTC+TGG | + | chr3.1:6732624-6732643 | MS.gene56347:CDS | 45.0% | |
| CGAGAAGAAAAGCAAGCTCT+TGG | + | chr3.1:6730194-6730213 | MS.gene56347:CDS | 45.0% | |
| GAACAGGAACAACGTCAAAG+AGG | + | chr3.1:6733111-6733130 | MS.gene56347:intron | 45.0% | |
| GAGATGCGAGCAAATCTTAC+AGG | - | chr3.1:6732478-6732497 | None:intergenic | 45.0% | |
| GAGGACATAAGTGCTTATGC+TGG | + | chr3.1:6729387-6729406 | MS.gene56347:CDS | 45.0% | |
| GATTTCAGTTCAGTGCAGCT+TGG | + | chr3.1:6730520-6730539 | MS.gene56347:intron | 45.0% | |
| GCTAATGGCATTGCTATGAC+TGG | + | chr3.1:6733138-6733157 | MS.gene56347:CDS | 45.0% | |
| GTAGGATCTGCATTCATGCT+TGG | + | chr3.1:6729510-6729529 | MS.gene56347:intron | 45.0% | |
| GTTTCACCATCTCATGTGTC+AGG | + | chr3.1:6730456-6730475 | MS.gene56347:intron | 45.0% | |
| TCGCATATGAGTGATAAGCG+AGG | - | chr3.1:6732859-6732878 | None:intergenic | 45.0% | |
| TCGCTTATCACTCATATGCG+AGG | + | chr3.1:6732858-6732877 | MS.gene56347:intron | 45.0% | |
| TCGTTACGGTAGAAAACCTG+TGG | + | chr3.1:6729572-6729591 | MS.gene56347:CDS | 45.0% | |
| TGAATGGCGAAATCTTACCC+CGG | - | chr3.1:6732500-6732519 | None:intergenic | 45.0% | |
| TGTCAATGCCCTATAGGTGT+CGG | - | chr3.1:6730251-6730270 | None:intergenic | 45.0% | |
| TTAAGGGCCAGTTTAGGAAG+AGG | - | chr3.1:6731676-6731695 | None:intergenic | 45.0% | |
| TTTCAGTTCAGTGCAGCTTG+GGG | + | chr3.1:6730522-6730541 | MS.gene56347:intron | 45.0% | |
| ! | CAATGGACTCATTGCCAAGA+GGG | - | chr3.1:6731580-6731599 | None:intergenic | 45.0% |
| ! | GTAAGATTTGCTCGCATCTC+CGG | + | chr3.1:6732478-6732497 | MS.gene56347:CDS | 45.0% |
| ! | TAAGATTTGCTCGCATCTCC+GGG | + | chr3.1:6732479-6732498 | MS.gene56347:CDS | 45.0% |
| ! | TCAATGGACTCATTGCCAAG+AGG | - | chr3.1:6731581-6731600 | None:intergenic | 45.0% |
| !! | ATAATTGGACCAGCTTTGGG+GGG | + | chr3.1:6730555-6730574 | MS.gene56347:CDS | 45.0% |
| !! | ATGATGGGTATAGGGAAAGC+TGG | - | chr3.1:6732438-6732457 | None:intergenic | 45.0% |
| !! | GGCATGTTGATTTGGAGAAC+AGG | + | chr3.1:6733095-6733114 | MS.gene56347:intron | 45.0% |
| !! | TGGTTTGCTTGGACCAATGA+AGG | + | chr3.1:6730030-6730049 | MS.gene56347:CDS | 45.0% |
| ATGCATGTCTGCTCGACTGT+AGG | + | chr3.1:6731538-6731557 | MS.gene56347:intron | 50.0% | |
| CACGTGTGTCAATGCCCTAT+AGG | - | chr3.1:6730257-6730276 | None:intergenic | 50.0% | |
| CGGTAGTAATTGCCTGCATC+TGG | + | chr3.1:6731083-6731102 | MS.gene56347:CDS | 50.0% | |
| CGTCAAAGAGGAGCAGCTAA+TGG | + | chr3.1:6733123-6733142 | MS.gene56347:CDS | 50.0% | |
| GAGAGACCTGACACATGAGA+TGG | - | chr3.1:6730465-6730484 | None:intergenic | 50.0% | |
| GTCTAGGCCTATAAGCCTTC+AGG | - | chr3.1:6733380-6733399 | None:intergenic | 50.0% | |
| GTGAGTCCTAGAAGGTTAGG+TGG | + | chr3.1:6732055-6732074 | MS.gene56347:CDS | 50.0% | |
| TGATAAGCGAGGCTCCAGAT+CGG | - | chr3.1:6732848-6732867 | None:intergenic | 50.0% | |
| TTTGGATGGCCGTTACAACG+CGG | + | chr3.1:6729987-6730006 | MS.gene56347:CDS | 50.0% | |
| ! | AAGATTTGCTCGCATCTCCG+GGG | + | chr3.1:6732480-6732499 | MS.gene56347:CDS | 50.0% |
| ! | AATTGCCTGCATCTGGCTTC+CGG | + | chr3.1:6731090-6731109 | MS.gene56347:CDS | 50.0% |
| ! | TTTGGGGGGTTATTTGGCTC+AGG | + | chr3.1:6730569-6730588 | MS.gene56347:CDS | 50.0% |
| !! | ACCAGCTTTGGGGGGTTATT+TGG | + | chr3.1:6730563-6730582 | MS.gene56347:CDS | 50.0% |
| !! | CTATAGGGCATTGACACACG+TGG | + | chr3.1:6730255-6730274 | MS.gene56347:intron | 50.0% |
| !! | TATCTAGGAAGCGCTAACGC+AGG | - | chr3.1:6730360-6730379 | None:intergenic | 50.0% |
| ACAATTGGTCCAGCTGGAGG+TGG | + | chr3.1:6733177-6733196 | MS.gene56347:CDS | 55.0% | |
| ACATACCGGAAGCCAGATGC+AGG | - | chr3.1:6731098-6731117 | None:intergenic | 55.0% | |
| GCCAAATAACCCCCCAAAGC+TGG | - | chr3.1:6730567-6730586 | None:intergenic | 55.0% | |
| GCGGTGAGTCCTAGAAGGTT+AGG | + | chr3.1:6732052-6732071 | MS.gene56347:CDS | 55.0% | |
| TATGGGCGGTGAGTCCTAGA+AGG | + | chr3.1:6732047-6732066 | MS.gene56347:CDS | 55.0% | |
| TCATTCTGCCTCCACCGATC+TGG | + | chr3.1:6732831-6732850 | MS.gene56347:intron | 55.0% | |
| TGGACTCATTGCCAAGAGGG+TGG | - | chr3.1:6731577-6731596 | None:intergenic | 55.0% | |
| TTCAGTGCAGCTTGGGGCAT+GGG | + | chr3.1:6730528-6730547 | MS.gene56347:CDS | 55.0% | |
| GTTCAGTGCAGCTTGGGGCA+TGG | + | chr3.1:6730527-6730546 | MS.gene56347:intron | 60.0% | |
| TAAGCGAGGCTCCAGATCGG+TGG | - | chr3.1:6732845-6732864 | None:intergenic | 60.0% | |
| CACACTGCACCACCTCCAGC+TGG | - | chr3.1:6733189-6733208 | None:intergenic | 65.0% | |
| GCGAGGCTCCAGATCGGTGG+AGG | - | chr3.1:6732842-6732861 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 6728773 | 6733402 | 6728773 | ID=MS.gene56347 |
| chr3.1 | mRNA | 6728773 | 6733402 | 6728773 | ID=MS.gene56347.t1;Parent=MS.gene56347 |
| chr3.1 | exon | 6728773 | 6728920 | 6728773 | ID=MS.gene56347.t1.exon1;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6728773 | 6728920 | 6728773 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6729151 | 6729191 | 6729151 | ID=MS.gene56347.t1.exon2;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6729151 | 6729191 | 6729151 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6729357 | 6729417 | 6729357 | ID=MS.gene56347.t1.exon3;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6729357 | 6729417 | 6729357 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6729514 | 6729616 | 6729514 | ID=MS.gene56347.t1.exon4;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6729514 | 6729616 | 6729514 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6729949 | 6730051 | 6729949 | ID=MS.gene56347.t1.exon5;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6729949 | 6730051 | 6729949 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6730173 | 6730226 | 6730173 | ID=MS.gene56347.t1.exon6;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6730173 | 6730226 | 6730173 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6730528 | 6730590 | 6730528 | ID=MS.gene56347.t1.exon7;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6730528 | 6730590 | 6730528 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6730872 | 6730921 | 6730872 | ID=MS.gene56347.t1.exon8;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6730872 | 6730921 | 6730872 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6731036 | 6731111 | 6731036 | ID=MS.gene56347.t1.exon9;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6731036 | 6731111 | 6731036 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6731560 | 6731751 | 6731560 | ID=MS.gene56347.t1.exon10;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6731560 | 6731751 | 6731560 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6732037 | 6732124 | 6732037 | ID=MS.gene56347.t1.exon11;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6732037 | 6732124 | 6732037 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6732416 | 6732501 | 6732416 | ID=MS.gene56347.t1.exon12;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6732416 | 6732501 | 6732416 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6732594 | 6732701 | 6732594 | ID=MS.gene56347.t1.exon13;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6732594 | 6732701 | 6732594 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6732973 | 6733017 | 6732973 | ID=MS.gene56347.t1.exon14;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6732973 | 6733017 | 6732973 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6733117 | 6733205 | 6733117 | ID=MS.gene56347.t1.exon15;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6733117 | 6733205 | 6733117 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| chr3.1 | exon | 6733384 | 6733402 | 6733384 | ID=MS.gene56347.t1.exon16;Parent=MS.gene56347.t1 |
| chr3.1 | CDS | 6733384 | 6733402 | 6733384 | ID=cds.MS.gene56347.t1;Parent=MS.gene56347.t1 |
| Gene Sequence |
| Protein sequence |
