Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79081.t1 | XP_004502380.1 | 88.3 | 486 | 57 | 0 | 1 | 486 | 1 | 486 | 2.70E-249 | 870.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79081.t1 | Q8RWN2 | 57.4 | 481 | 198 | 3 | 1 | 474 | 1 | 481 | 2.4e-153 | 543.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79081.t1 | A0A1S2YBH2 | 88.3 | 486 | 57 | 0 | 1 | 486 | 1 | 486 | 2.0e-249 | 870.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016424 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene045176 | PPI |
| MS.gene78667 | MS.gene79081 | PPI |
| MS.gene56347 | MS.gene79081 | PPI |
| MS.gene51712 | MS.gene79081 | PPI |
| MS.gene067076 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene045173 | PPI |
| MS.gene063903 | MS.gene79081 | PPI |
| MS.gene016423 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene59760 | PPI |
| MS.gene79081 | MS.gene009215 | PPI |
| MS.gene79081 | MS.gene75533 | PPI |
| MS.gene063904 | MS.gene79081 | PPI |
| MS.gene78670 | MS.gene79081 | PPI |
| MS.gene59759 | MS.gene79081 | PPI |
| MS.gene51711 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene016422 | PPI |
| MS.gene56348 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene064910 | PPI |
| MS.gene79081 | MS.gene51995 | PPI |
| MS.gene064455 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene016425 | PPI |
| MS.gene79081 | MS.gene75531 | PPI |
| MS.gene79081 | MS.gene038683 | PPI |
| MS.gene59757 | MS.gene79081 | PPI |
| MS.gene063906 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene063905 | PPI |
| MS.gene51992 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene78668 | PPI |
| MS.gene59758 | MS.gene79081 | PPI |
| MS.gene78669 | MS.gene79081 | PPI |
| MS.gene79081 | MS.gene78667 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79081.t1 | MTR_3g086440 | 94.493 | 454 | 25 | 0 | 1 | 454 | 1 | 454 | 0.0 | 853 |
| MS.gene79081.t1 | MTR_8g062990 | 74.127 | 487 | 125 | 1 | 1 | 486 | 1 | 487 | 0.0 | 758 |
| MS.gene79081.t1 | MTR_3g010820 | 73.101 | 487 | 130 | 1 | 1 | 486 | 1 | 487 | 0.0 | 751 |
| MS.gene79081.t1 | MTR_8g042770 | 69.610 | 487 | 147 | 1 | 1 | 486 | 1 | 487 | 0.0 | 733 |
| MS.gene79081.t1 | MTR_8g042780 | 69.854 | 481 | 141 | 2 | 7 | 486 | 3 | 480 | 0.0 | 715 |
| MS.gene79081.t1 | MTR_8g042870 | 68.994 | 487 | 147 | 2 | 1 | 486 | 1 | 484 | 0.0 | 694 |
| MS.gene79081.t1 | MTR_3g010850 | 70.248 | 484 | 139 | 3 | 4 | 486 | 2 | 481 | 0.0 | 688 |
| MS.gene79081.t1 | MTR_8g042780 | 70.766 | 431 | 122 | 2 | 7 | 436 | 3 | 430 | 0.0 | 649 |
| MS.gene79081.t1 | MTR_3g010850 | 67.442 | 473 | 137 | 5 | 17 | 486 | 11 | 469 | 0.0 | 629 |
| MS.gene79081.t1 | MTR_8g042820 | 69.965 | 283 | 82 | 1 | 153 | 435 | 34 | 313 | 1.10e-148 | 427 |
| MS.gene79081.t1 | MTR_1157s0010 | 67.296 | 159 | 52 | 0 | 328 | 486 | 2 | 160 | 3.35e-73 | 228 |
| MS.gene79081.t1 | MTR_1194s0010 | 68.707 | 147 | 45 | 1 | 7 | 152 | 3 | 149 | 5.38e-68 | 214 |
| MS.gene79081.t1 | MTR_8g075280 | 54.255 | 94 | 26 | 3 | 42 | 134 | 107 | 184 | 2.55e-16 | 78.2 |
| MS.gene79081.t1 | MTR_8g075280 | 35.500 | 200 | 95 | 8 | 31 | 229 | 96 | 262 | 2.72e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79081.t1 | AT5G13750 | 55.858 | 478 | 207 | 2 | 4 | 479 | 3 | 478 | 0.0 | 558 |
| MS.gene79081.t1 | AT5G13740 | 56.790 | 486 | 203 | 3 | 1 | 479 | 1 | 486 | 0.0 | 538 |
| MS.gene79081.t1 | AT3G43790 | 53.653 | 479 | 212 | 4 | 1 | 474 | 1 | 474 | 0.0 | 520 |
| MS.gene79081.t1 | AT3G43790 | 53.653 | 479 | 212 | 4 | 1 | 474 | 1 | 474 | 0.0 | 520 |
| MS.gene79081.t1 | AT3G43790 | 52.990 | 485 | 212 | 5 | 1 | 474 | 1 | 480 | 4.89e-180 | 513 |
| MS.gene79081.t1 | AT3G43790 | 52.990 | 485 | 212 | 5 | 1 | 474 | 1 | 480 | 4.89e-180 | 513 |
| MS.gene79081.t1 | AT5G13740 | 56.561 | 442 | 185 | 3 | 1 | 435 | 1 | 442 | 3.52e-173 | 494 |
| MS.gene79081.t1 | AT5G13750 | 54.258 | 411 | 184 | 2 | 4 | 412 | 3 | 411 | 5.98e-163 | 467 |
| MS.gene79081.t1 | AT5G13750 | 54.258 | 411 | 184 | 2 | 4 | 412 | 3 | 411 | 5.98e-163 | 467 |
| MS.gene79081.t1 | AT5G13750 | 56.345 | 394 | 168 | 2 | 88 | 479 | 1 | 392 | 1.18e-160 | 461 |
| MS.gene79081.t1 | AT3G43790 | 53.171 | 410 | 182 | 4 | 1 | 405 | 1 | 405 | 3.12e-150 | 435 |
| MS.gene79081.t1 | AT5G13940 | 44.578 | 83 | 30 | 1 | 274 | 356 | 11 | 77 | 1.81e-14 | 76.6 |
| MS.gene79081.t1 | AT5G13940 | 44.578 | 83 | 30 | 1 | 274 | 356 | 162 | 228 | 2.22e-14 | 76.3 |
Find 117 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATTCTGAAGTTTCTTA+TGG | 0.159088 | 3.1:-69350981 | MS.gene79081:CDS |
| ATGAAAGCCTATTTCTAAAT+TGG | 0.204663 | 3.1:-69351819 | MS.gene79081:CDS |
| CTTTCCCTTCGTTTATTTCA+TGG | 0.216855 | 3.1:-69353292 | MS.gene79081:intron |
| GTTAACCTTGCTCGCATTGC+TGG | 0.221970 | 3.1:-69351184 | MS.gene79081:CDS |
| TTTCTTCTTGGAAGTTTAAA+TGG | 0.254939 | 3.1:-69352758 | MS.gene79081:CDS |
| TCCAGCATTAGGAGGTTATT+TGG | 0.275455 | 3.1:-69352414 | MS.gene79081:CDS |
| TGAGAGGCCAATTTAGAAAT+AGG | 0.275927 | 3.1:+69351812 | None:intergenic |
| CAAGTCCTTCAATAACATTC+AGG | 0.283968 | 3.1:+69350060 | None:intergenic |
| GGCAATGTTCTTGCAATATC+AGG | 0.291727 | 3.1:-69351529 | MS.gene79081:intron |
| ATTTCAGGTTGTGGCAGCTT+GGG | 0.294108 | 3.1:-69352456 | MS.gene79081:intron |
| AACATCTGTTCCAAGTTCTT+TGG | 0.296273 | 3.1:+69353473 | None:intergenic |
| AGAGAAGAAAATCAAGCTTT+AGG | 0.302771 | 3.1:-69352565 | MS.gene79081:CDS |
| TCCATTCTGAAGTTTCTTAT+GGG | 0.311221 | 3.1:-69350980 | MS.gene79081:CDS |
| TGGACTCATTGCTGCCATTA+TGG | 0.312526 | 3.1:+69351908 | None:intergenic |
| AGAAAACCAGCTATAACATT+AGG | 0.313041 | 3.1:-69352942 | MS.gene79081:CDS |
| AATTGCCTGCATTTGGTTAC+CGG | 0.324014 | 3.1:-69352037 | MS.gene79081:intron |
| GTTCAAACCGCCCAACCTTC+GGG | 0.329711 | 3.1:+69351570 | None:intergenic |
| TATTTCCAAAGGATTCCTTT+TGG | 0.332250 | 3.1:-69352270 | MS.gene79081:CDS |
| TTAGTCATTGGTCCAGCATT+AGG | 0.338459 | 3.1:-69352425 | MS.gene79081:CDS |
| CAATATTTATCACAAGGTAT+AGG | 0.357155 | 3.1:+69351005 | None:intergenic |
| TGGTCTGCTGGGACCTATAA+AGG | 0.359430 | 3.1:-69352738 | MS.gene79081:intron |
| GAAAACCAGCTATAACATTA+GGG | 0.360625 | 3.1:-69352941 | MS.gene79081:CDS |
| TTATCCCAAAAGGAATCCTT+TGG | 0.364927 | 3.1:+69352265 | None:intergenic |
| GCAATGCGAGCAAGGTTAAC+AGG | 0.369231 | 3.1:+69351187 | None:intergenic |
| TTAACCTTGCTCGCATTGCT+GGG | 0.372906 | 3.1:-69351183 | MS.gene79081:CDS |
| TTGGTCTTAGCACAAATCTA+TGG | 0.392600 | 3.1:-69352799 | MS.gene79081:CDS |
| ATCAGCATGAGATTTCTTCT+TGG | 0.396540 | 3.1:-69352770 | MS.gene79081:CDS |
| CAGTAGCAATTGCCTGCATT+TGG | 0.397297 | 3.1:-69352044 | MS.gene79081:CDS |
| AGTTCAAACCGCCCAACCTT+CGG | 0.398585 | 3.1:+69351569 | None:intergenic |
| AATATTTATCACAAGGTATA+GGG | 0.399448 | 3.1:+69351006 | None:intergenic |
| GGCTGTCAGTCCCCGAAGGT+TGG | 0.407548 | 3.1:-69351581 | MS.gene79081:CDS |
| GATTTCAGGTTGTGGCAGCT+TGG | 0.411318 | 3.1:-69352457 | MS.gene79081:intron |
| GTTGTGGCAGCTTGGGGAGT+AGG | 0.417626 | 3.1:-69352449 | MS.gene79081:CDS |
| TTTGCCCTGAATGTTATTGA+AGG | 0.426862 | 3.1:-69350065 | MS.gene79081:CDS |
| TGGAAGTTTAAATGGTCTGC+TGG | 0.431629 | 3.1:-69352750 | MS.gene79081:CDS |
| TGGGGAGTAGGTTTAGTCAT+TGG | 0.434684 | 3.1:-69352437 | MS.gene79081:CDS |
| GCTGTCAGTCCCCGAAGGTT+GGG | 0.444834 | 3.1:-69351580 | MS.gene79081:CDS |
| CTGAATGTTATTGAAGGACT+TGG | 0.449350 | 3.1:-69350059 | MS.gene79081:CDS |
| GAAACACTTCACTTCCATAA+TGG | 0.459858 | 3.1:-69351922 | MS.gene79081:CDS |
| GTTGATCAAGCCAAAGAACT+TGG | 0.459865 | 3.1:-69353483 | MS.gene79081:CDS |
| CCCTTCATGACATCACTGTC+TGG | 0.465408 | 3.1:-69351034 | MS.gene79081:CDS |
| AACTTTACAACTAATGATGT+TGG | 0.466950 | 3.1:-69351550 | MS.gene79081:CDS |
| CATCAAAGAGGGGCAGCTAA+TGG | 0.467466 | 3.1:-69350694 | MS.gene79081:CDS |
| ATTAGGAGGTTATTTGGCTC+AGG | 0.468503 | 3.1:-69352408 | MS.gene79081:intron |
| ATGTCAGCATTCAAAACAAT+AGG | 0.475779 | 3.1:-69350655 | MS.gene79081:CDS |
| TTCAAAACAATAGGTCCTGC+TGG | 0.479484 | 3.1:-69350646 | MS.gene79081:CDS |
| TATCACTGTAACTGCTCCAT+TGG | 0.480668 | 3.1:+69349990 | None:intergenic |
| ATAGCCCCTAATGTTATAGC+TGG | 0.485296 | 3.1:+69352936 | None:intergenic |
| GCCAAATAACCTCCTAATGC+TGG | 0.486167 | 3.1:+69352413 | None:intergenic |
| ACGTAGGAAACAATTTCAAC+TGG | 0.489140 | 3.1:-69350856 | MS.gene79081:intron |
| AAAAGCTGATATTACAAAGC+AGG | 0.491657 | 3.1:+69352074 | None:intergenic |
| ATCTACTTACTTATCCCAAA+AGG | 0.496556 | 3.1:+69352255 | None:intergenic |
| TGAGAATTGCCCTGGTTGTA+AGG | 0.498333 | 3.1:-69353505 | MS.gene79081:CDS |
| TGCAGCTTCCACATTGTCAG+TGG | 0.500042 | 3.1:+69351888 | None:intergenic |
| GTAACTTTGCAAGAGGGGTA+TGG | 0.502323 | 3.1:+69351057 | None:intergenic |
| TTAAATGCTTCTTTCCTCCC+AGG | 0.509352 | 3.1:-69350352 | MS.gene79081:intron |
| CACAATGCACCGCCTCCAGC+AGG | 0.514119 | 3.1:+69350631 | None:intergenic |
| AAGTCCTTCAATAACATTCA+GGG | 0.515694 | 3.1:+69350061 | None:intergenic |
| GCCAGACAGTGATGTCATGA+AGG | 0.527185 | 3.1:+69351033 | None:intergenic |
| AAGTATTATGAGAATTGCCC+TGG | 0.529432 | 3.1:-69353513 | MS.gene79081:CDS |
| TTTCAGGTTGTGGCAGCTTG+GGG | 0.529821 | 3.1:-69352455 | MS.gene79081:intron |
| AATGTGGAAGCTGCAGAAGT+TGG | 0.533488 | 3.1:-69351880 | MS.gene79081:CDS |
| AAAGAGCGATGCAAGGGGCA+AGG | 0.535798 | 3.1:+69353311 | None:intergenic |
| GCAGGATCTTCATACATGCT+TGG | 0.536139 | 3.1:-69353014 | MS.gene79081:intron |
| AACTTTGACATCTATACCGT+GGG | 0.537488 | 3.1:-69352988 | MS.gene79081:CDS |
| GAAGGGAAAGAGCGATGCAA+GGG | 0.540991 | 3.1:+69353305 | None:intergenic |
| TTGATTAATGCAGATTAGCA+TGG | 0.549107 | 3.1:-69350387 | MS.gene79081:intron |
| GGAAGTTTAAATGGTCTGCT+GGG | 0.551066 | 3.1:-69352749 | MS.gene79081:CDS |
| GAATCCTTTGGAAATAGATG+TGG | 0.557408 | 3.1:+69352277 | None:intergenic |
| GTCAGTCCCCGAAGGTTGGG+CGG | 0.562567 | 3.1:-69351577 | MS.gene79081:CDS |
| AAGCTGGTATATTACAATAC+CGG | 0.563081 | 3.1:+69351243 | None:intergenic |
| GACAGGAACAACATCAAAGA+GGG | 0.566186 | 3.1:-69350705 | MS.gene79081:intron |
| GTCATTGGTCCAGCATTAGG+AGG | 0.567266 | 3.1:-69352422 | MS.gene79081:CDS |
| TTGATGGGTACAAAGAAAGC+TGG | 0.571034 | 3.1:+69351227 | None:intergenic |
| GAAGATATAAGCGCTTATGC+AGG | 0.572013 | 3.1:-69353125 | MS.gene79081:CDS |
| ACCCATAAGAAACTTCAGAA+TGG | 0.574517 | 3.1:+69350979 | None:intergenic |
| TAACCCCAGCAATGCGAGCA+AGG | 0.577012 | 3.1:+69351179 | None:intergenic |
| ACAATAGGTCCTGCTGGAGG+CGG | 0.577291 | 3.1:-69350640 | MS.gene79081:CDS |
| GCTTGATCAACCTTACAACC+AGG | 0.582705 | 3.1:+69353495 | None:intergenic |
| TCATGACATTACTTATCAAG+AGG | 0.583695 | 3.1:-69351755 | MS.gene79081:intron |
| AGATGTGGGTACTTCAGTGC+TGG | 0.587132 | 3.1:+69352292 | None:intergenic |
| AAAGCTGATATTACAAAGCA+GGG | 0.587471 | 3.1:+69352075 | None:intergenic |
| CCAGACAGTGATGTCATGAA+GGG | 0.591088 | 3.1:+69351034 | None:intergenic |
| AAGGGGTAACTTTGCAAGAG+GGG | 0.594121 | 3.1:+69351052 | None:intergenic |
| AGCGCTTATGCAGGTTATGT+AGG | 0.599493 | 3.1:-69353116 | MS.gene79081:intron |
| TAACCTTGCTCGCATTGCTG+GGG | 0.603249 | 3.1:-69351182 | MS.gene79081:intron |
| GGTATAATATCTGATCGCTA+TGG | 0.603660 | 3.1:-69352966 | MS.gene79081:CDS |
| CGAAGGGAAAGAGCGATGCA+AGG | 0.604024 | 3.1:+69353304 | None:intergenic |
| CTCACCATGAAATAAACGAA+GGG | 0.609116 | 3.1:+69353288 | None:intergenic |
| TCTTAGCACAAATCTATGGA+TGG | 0.609413 | 3.1:-69352795 | MS.gene79081:CDS |
| ACATACCGGTAACCAAATGC+AGG | 0.615558 | 3.1:+69352032 | None:intergenic |
| TATGGGCTGTCAGTCCCCGA+AGG | 0.617694 | 3.1:-69351585 | MS.gene79081:CDS |
| GTACCCACATCTATTTCCAA+AGG | 0.617843 | 3.1:-69352281 | MS.gene79081:CDS |
| TTTCAATATTGCAGAAAGCG+AGG | 0.620341 | 3.1:-69353147 | MS.gene79081:CDS |
| CAATGAGTCCACTGACAATG+TGG | 0.626071 | 3.1:-69351896 | MS.gene79081:CDS |
| GAAGGGGTAACTTTGCAAGA+GGG | 0.628765 | 3.1:+69351051 | None:intergenic |
| AATCCTTTGGAAATAGATGT+GGG | 0.630063 | 3.1:+69352278 | None:intergenic |
| TTCAAACCGCCCAACCTTCG+GGG | 0.632663 | 3.1:+69351571 | None:intergenic |
| TGAAGGGGTAACTTTGCAAG+AGG | 0.633111 | 3.1:+69351050 | None:intergenic |
| ATTTATCACAAGGTATAGGG+TGG | 0.636330 | 3.1:+69351009 | None:intergenic |
| ACTCACCATGAAATAAACGA+AGG | 0.641568 | 3.1:+69353287 | None:intergenic |
| TGACAGGAACAACATCAAAG+AGG | 0.644505 | 3.1:-69350706 | MS.gene79081:intron |
| CGATCAGATATTATACCCCA+CGG | 0.645888 | 3.1:+69352972 | None:intergenic |
| GATTAGCATGGTCACAAAAG+CGG | 0.646524 | 3.1:-69350375 | MS.gene79081:CDS |
| CCTTCTGCAAAATAGAGCAG+TGG | 0.647097 | 3.1:-69350827 | MS.gene79081:intron |
| CTTGATCAACCTTACAACCA+GGG | 0.653325 | 3.1:+69353496 | None:intergenic |
| TAGGGAGGCATACTGTTGAG+AGG | 0.657706 | 3.1:+69352542 | None:intergenic |
| TGGAAGCAATATTTATCACA+AGG | 0.662225 | 3.1:+69350999 | None:intergenic |
| GAACTTTGACATCTATACCG+TGG | 0.663827 | 3.1:-69352989 | MS.gene79081:CDS |
| ACAATAATAGATGACATGAG+AGG | 0.666864 | 3.1:+69351796 | None:intergenic |
| AAAACCAGCTATAACATTAG+GGG | 0.672817 | 3.1:-69352940 | MS.gene79081:CDS |
| AAGGGAAAGAGCGATGCAAG+GGG | 0.674212 | 3.1:+69353306 | None:intergenic |
| CAGACAGTGATGTCATGAAG+GGG | 0.692739 | 3.1:+69351035 | None:intergenic |
| AGCTGAGCATCATACCTGGG+AGG | 0.706338 | 3.1:+69350338 | None:intergenic |
| AAAACAATAGGTCCTGCTGG+AGG | 0.707613 | 3.1:-69350643 | MS.gene79081:CDS |
| ACAGGAACAACATCAAAGAG+GGG | 0.726956 | 3.1:-69350704 | MS.gene79081:intron |
| ACTTTGACATCTATACCGTG+GGG | 0.792620 | 3.1:-69352987 | MS.gene79081:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTAAATATATTTATTTTC+AGG | - | chr3.1:69350367-69350386 | MS.gene79081:CDS | 10.0% |
| !!! | TTTAGATATTCATTAATTTT+GGG | - | chr3.1:69352061-69352080 | MS.gene79081:CDS | 10.0% |
| !! | TAAAAAAATTTAAAGAGTCA+AGG | + | chr3.1:69351381-69351400 | None:intergenic | 15.0% |
| !! | TCATTTATACTAATTCAAAT+AGG | - | chr3.1:69350493-69350512 | MS.gene79081:intron | 15.0% |
| !!! | ATATTGTTATATCTTTTTCT+CGG | - | chr3.1:69352100-69352119 | MS.gene79081:intron | 15.0% |
| !!! | ATTTTTGTTTAATAGCAAAA+GGG | + | chr3.1:69351184-69351203 | None:intergenic | 15.0% |
| !!! | CTTTAGATATTCATTAATTT+TGG | - | chr3.1:69352060-69352079 | MS.gene79081:CDS | 15.0% |
| !! | AAGAGGGAAAAATAAAAATA+TGG | + | chr3.1:69351554-69351573 | None:intergenic | 20.0% |
| !! | AATATTTATCACAAGGTATA+GGG | + | chr3.1:69352541-69352560 | None:intergenic | 20.0% |
| !! | ACTATGTCATAAAAAAAACT+TGG | + | chr3.1:69353042-69353061 | None:intergenic | 20.0% |
| !! | GTTTGAATTATTTGCTTAAT+AGG | - | chr3.1:69353259-69353278 | MS.gene79081:intron | 20.0% |
| !! | TAAACAAAAAAGATATCAGA+GGG | + | chr3.1:69350201-69350220 | None:intergenic | 20.0% |
| !! | TTAAACAAAAAAGATATCAG+AGG | + | chr3.1:69350202-69350221 | None:intergenic | 20.0% |
| !! | TTTCTATACAAATAAGGATA+TGG | - | chr3.1:69353386-69353405 | MS.gene79081:intron | 20.0% |
| !!! | AATTTGCTCTAGTAAAAAAA+TGG | + | chr3.1:69352221-69352240 | None:intergenic | 20.0% |
| !!! | ACATATATAACATGTTGATT+TGG | - | chr3.1:69352813-69352832 | MS.gene79081:CDS | 20.0% |
| !!! | ACTATTTTACATTTAACTGT+AGG | - | chr3.1:69353440-69353459 | MS.gene79081:CDS | 20.0% |
| !!! | AGGTGATAAAGAATAAATTT+TGG | - | chr3.1:69351156-69351175 | MS.gene79081:intron | 20.0% |
| !!! | ATATATTTATTTTCAGGTAG+AGG | - | chr3.1:69350373-69350392 | MS.gene79081:CDS | 20.0% |
| !!! | GATTTTTGTTTAATAGCAAA+AGG | + | chr3.1:69351185-69351204 | None:intergenic | 20.0% |
| !!! | TAATACTTTTTGTTCAACAA+TGG | + | chr3.1:69350019-69350038 | None:intergenic | 20.0% |
| !!! | TACTTTTTTTTATGGAATTG+TGG | - | chr3.1:69352789-69352808 | MS.gene79081:CDS | 20.0% |
| !!! | TGAGATCATACTTTTTTTTA+TGG | - | chr3.1:69352781-69352800 | MS.gene79081:CDS | 20.0% |
| !!! | TTCGAAATCTTTCTTTTATA+TGG | - | chr3.1:69350098-69350117 | MS.gene79081:intron | 20.0% |
| !!! | TTTGAATTTGTGTCATTTTA+TGG | - | chr3.1:69350864-69350883 | MS.gene79081:intron | 20.0% |
| ! | AAATTCCGAATCACAATAAT+TGG | + | chr3.1:69352407-69352426 | None:intergenic | 25.0% |
| ! | AACCTAGTTAAAGAGTAAAA+TGG | + | chr3.1:69351932-69351951 | None:intergenic | 25.0% |
| ! | AACTCTAATTTATTAGCAGA+AGG | - | chr3.1:69352189-69352208 | MS.gene79081:intron | 25.0% |
| ! | AACTTTACAACTAATGATGT+TGG | - | chr3.1:69351994-69352013 | MS.gene79081:intron | 25.0% |
| ! | ACATATAGTATATAGCTTGA+AGG | + | chr3.1:69350669-69350688 | None:intergenic | 25.0% |
| ! | ACTCTAATTTATTAGCAGAA+GGG | - | chr3.1:69352190-69352209 | MS.gene79081:intron | 25.0% |
| ! | AGAGAAGCAAAATAAATCAA+AGG | + | chr3.1:69352945-69352964 | None:intergenic | 25.0% |
| ! | ATATGCCAATTATTGTGATT+CGG | - | chr3.1:69352399-69352418 | MS.gene79081:intron | 25.0% |
| ! | ATCACAATAATTGGCATATA+CGG | + | chr3.1:69352398-69352417 | None:intergenic | 25.0% |
| ! | CAATATTTATCACAAGGTAT+AGG | + | chr3.1:69352542-69352561 | None:intergenic | 25.0% |
| ! | GAGAAGCAAAATAAATCAAA+GGG | + | chr3.1:69352944-69352963 | None:intergenic | 25.0% |
| ! | GTATAGAAAAACACCTTTAT+AGG | + | chr3.1:69350822-69350841 | None:intergenic | 25.0% |
| ! | TAAAATTGATTGAATCTGCA+GGG | - | chr3.1:69352990-69353009 | MS.gene79081:CDS | 25.0% |
| ! | TACAACTTACATTTCAATGT+CGG | + | chr3.1:69352154-69352173 | None:intergenic | 25.0% |
| ! | TCAAAAGCAGAATAAGAAAA+TGG | + | chr3.1:69353141-69353160 | None:intergenic | 25.0% |
| ! | TCAGAGTTTCTATACAAATA+AGG | - | chr3.1:69353380-69353399 | MS.gene79081:intron | 25.0% |
| ! | TGTAAAGAAAGAAAAACCAA+TGG | - | chr3.1:69353538-69353557 | MS.gene79081:CDS | 25.0% |
| ! | TTAAAACAACAATAGACTGA+AGG | + | chr3.1:69351207-69351226 | None:intergenic | 25.0% |
| ! | TTAATAGGAAAGAACATAAC+TGG | - | chr3.1:69353274-69353293 | MS.gene79081:intron | 25.0% |
| ! | TTGTAGCTTACATATATCAT+TGG | + | chr3.1:69350922-69350941 | None:intergenic | 25.0% |
| ! | TTTCTTCTTGGAAGTTTAAA+TGG | - | chr3.1:69350786-69350805 | MS.gene79081:intron | 25.0% |
| !! | TCTTTTAGTAGCTATATTAC+TGG | - | chr3.1:69353411-69353430 | MS.gene79081:intron | 25.0% |
| !! | TTTGATGTTCAAACCATTTT+TGG | - | chr3.1:69353514-69353533 | MS.gene79081:CDS | 25.0% |
| !!! | ATGAAAGCCTATTTCTAAAT+TGG | - | chr3.1:69351725-69351744 | MS.gene79081:intron | 25.0% |
| !!! | TTGAAATTTGTCTTGTTGTT+TGG | - | chr3.1:69352441-69352460 | MS.gene79081:CDS | 25.0% |
| !!! | TTGATGTTCAAACCATTTTT+GGG | - | chr3.1:69353515-69353534 | MS.gene79081:CDS | 25.0% |
| AAAAAATATGGAAACCTGCA+AGG | + | chr3.1:69351448-69351467 | None:intergenic | 30.0% | |
| AAAACCAGCTATAACATTAG+GGG | - | chr3.1:69350604-69350623 | MS.gene79081:intron | 30.0% | |
| AAAAGCTGATATTACAAAGC+AGG | + | chr3.1:69351473-69351492 | None:intergenic | 30.0% | |
| AAAGCTGATATTACAAAGCA+GGG | + | chr3.1:69351472-69351491 | None:intergenic | 30.0% | |
| AAATTAATATACGCAGCAGA+GGG | + | chr3.1:69351847-69351866 | None:intergenic | 30.0% | |
| AACTTGAATACATAGCTGAT+AGG | + | chr3.1:69353065-69353084 | None:intergenic | 30.0% | |
| AAGCTGGTATATTACAATAC+CGG | + | chr3.1:69352304-69352323 | None:intergenic | 30.0% | |
| AAGTCCTTCAATAACATTCA+GGG | + | chr3.1:69353486-69353505 | None:intergenic | 30.0% | |
| ACAATAATAGATGACATGAG+AGG | + | chr3.1:69351751-69351770 | None:intergenic | 30.0% | |
| ACATGTCGAATATAATAGCT+CGG | - | chr3.1:69351056-69351075 | MS.gene79081:CDS | 30.0% | |
| AGAAAACCAGCTATAACATT+AGG | - | chr3.1:69350602-69350621 | MS.gene79081:intron | 30.0% | |
| AGAGAAGAAAATCAAGCTTT+AGG | - | chr3.1:69350979-69350998 | MS.gene79081:CDS | 30.0% | |
| AGATACGATATAGTAGACAA+AGG | + | chr3.1:69351029-69351048 | None:intergenic | 30.0% | |
| ATCTACTTACTTATCCCAAA+AGG | + | chr3.1:69351292-69351311 | None:intergenic | 30.0% | |
| ATGTCAGCATTCAAAACAAT+AGG | - | chr3.1:69352889-69352908 | MS.gene79081:intron | 30.0% | |
| CATATACATATATAGTCGCA+TGG | + | chr3.1:69351581-69351600 | None:intergenic | 30.0% | |
| CTAAAATTGATTGAATCTGC+AGG | - | chr3.1:69352989-69353008 | MS.gene79081:CDS | 30.0% | |
| GAAAAATAAAAATATGGCCG+AGG | + | chr3.1:69351548-69351567 | None:intergenic | 30.0% | |
| GAAAACCAGCTATAACATTA+GGG | - | chr3.1:69350603-69350622 | MS.gene79081:intron | 30.0% | |
| GAGGAAATTAAGATACATAC+CGG | + | chr3.1:69351529-69351548 | None:intergenic | 30.0% | |
| GATATAGTAGACAAAGGTTA+GGG | + | chr3.1:69351023-69351042 | None:intergenic | 30.0% | |
| GGTATGTATCTTAATTTCCT+CGG | - | chr3.1:69351528-69351547 | MS.gene79081:intron | 30.0% | |
| GTAATGAGATAACAGCTAAT+GGG | + | chr3.1:69352755-69352774 | None:intergenic | 30.0% | |
| GTTAGTCAATATAAAGAGAG+AGG | + | chr3.1:69352651-69352670 | None:intergenic | 30.0% | |
| TAAATTAATATACGCAGCAG+AGG | + | chr3.1:69351848-69351867 | None:intergenic | 30.0% | |
| TAGGATTGTAAAAATGTTGC+AGG | - | chr3.1:69350512-69350531 | MS.gene79081:intron | 30.0% | |
| TCATGACATTACTTATCAAG+AGG | - | chr3.1:69351789-69351808 | MS.gene79081:CDS | 30.0% | |
| TCTTTCTTTACACCCAAAAA+TGG | + | chr3.1:69353530-69353549 | None:intergenic | 30.0% | |
| TGGAAGCAATATTTATCACA+AGG | + | chr3.1:69352548-69352567 | None:intergenic | 30.0% | |
| TTGATTAATGCAGATTAGCA+TGG | - | chr3.1:69353157-69353176 | MS.gene79081:CDS | 30.0% | |
| ! | AATCCTTTGGAAATAGATGT+GGG | + | chr3.1:69351269-69351288 | None:intergenic | 30.0% |
| ! | ACTAACTGTAGTACTTTTGT+TGG | - | chr3.1:69352665-69352684 | MS.gene79081:intron | 30.0% |
| ! | ATTTCCAAAGGATTCCTTTT+GGG | - | chr3.1:69351275-69351294 | MS.gene79081:intron | 30.0% |
| ! | CACCATTTTACTCTTTAACT+AGG | - | chr3.1:69351927-69351946 | MS.gene79081:intron | 30.0% |
| ! | CTGCAGATTCAATCAATTTT+AGG | + | chr3.1:69352991-69353010 | None:intergenic | 30.0% |
| ! | TAACTAGGTTTTCTCGTTAT+GGG | - | chr3.1:69351942-69351961 | MS.gene79081:intron | 30.0% |
| ! | TATTTCCAAAGGATTCCTTT+TGG | - | chr3.1:69351274-69351293 | MS.gene79081:intron | 30.0% |
| ! | TCTTGTTCTAAACTCTTCAA+TGG | - | chr3.1:69353337-69353356 | MS.gene79081:intron | 30.0% |
| ! | TCTTTCTTTTATATGGATCG+CGG | - | chr3.1:69350105-69350124 | MS.gene79081:intron | 30.0% |
| ! | TTAACTAGGTTTTCTCGTTA+TGG | - | chr3.1:69351941-69351960 | MS.gene79081:intron | 30.0% |
| !! | TCCATTCTGAAGTTTCTTAT+GGG | - | chr3.1:69352564-69352583 | MS.gene79081:CDS | 30.0% |
| !! | TGACTTTTTCTAAACCATTC+AGG | - | chr3.1:69352276-69352295 | MS.gene79081:CDS | 30.0% |
| !! | TTATACTTTGTTGTTGTGCT+CGG | - | chr3.1:69351398-69351417 | MS.gene79081:intron | 30.0% |
| !! | TTCCATTCTGAAGTTTCTTA+TGG | - | chr3.1:69352563-69352582 | MS.gene79081:CDS | 30.0% |
| !!! | CAATTTTAGGATGTCAACAA+TGG | + | chr3.1:69352978-69352997 | None:intergenic | 30.0% |
| !!! | GGTGAGTTTAACTTTTTTAC+TGG | - | chr3.1:69350273-69350292 | MS.gene79081:intron | 30.0% |
| AACATCTGTTCCAAGTTCTT+TGG | + | chr3.1:69350074-69350093 | None:intergenic | 35.0% | |
| AACTTTGACATCTATACCGT+GGG | - | chr3.1:69350556-69350575 | MS.gene79081:intron | 35.0% | |
| AAGTATTATGAGAATTGCCC+TGG | - | chr3.1:69350031-69350050 | MS.gene79081:CDS | 35.0% | |
| ACAAAAAAGATATCAGAGGG+AGG | + | chr3.1:69350198-69350217 | None:intergenic | 35.0% | |
| ACAAAGCAGGGCAAAAAATA+TGG | + | chr3.1:69351460-69351479 | None:intergenic | 35.0% | |
| ACCCATAAGAAACTTCAGAA+TGG | + | chr3.1:69352568-69352587 | None:intergenic | 35.0% | |
| ACGTAGGAAACAATTTCAAC+TGG | - | chr3.1:69352688-69352707 | MS.gene79081:intron | 35.0% | |
| ACTCACCATGAAATAAACGA+AGG | + | chr3.1:69350260-69350279 | None:intergenic | 35.0% | |
| ATCAGCATGAGATTTCTTCT+TGG | - | chr3.1:69350774-69350793 | MS.gene79081:intron | 35.0% | |
| ATTTATCACAAGGTATAGGG+TGG | + | chr3.1:69352538-69352557 | None:intergenic | 35.0% | |
| CAAATCATAAATCACCTTGC+AGG | - | chr3.1:69351431-69351450 | MS.gene79081:intron | 35.0% | |
| CAAGTCCTTCAATAACATTC+AGG | + | chr3.1:69353487-69353506 | None:intergenic | 35.0% | |
| CATAAGCCTGTTAATACAAG+AGG | + | chr3.1:69350945-69350964 | None:intergenic | 35.0% | |
| CGATATAGTAGACAAAGGTT+AGG | + | chr3.1:69351024-69351043 | None:intergenic | 35.0% | |
| CGTAATGAGATAACAGCTAA+TGG | + | chr3.1:69352756-69352775 | None:intergenic | 35.0% | |
| CTACAACCTCTTGTATTAAC+AGG | - | chr3.1:69350936-69350955 | MS.gene79081:intron | 35.0% | |
| CTCACCATGAAATAAACGAA+GGG | + | chr3.1:69350259-69350278 | None:intergenic | 35.0% | |
| CTGAATGTTATTGAAGGACT+TGG | - | chr3.1:69353485-69353504 | MS.gene79081:CDS | 35.0% | |
| CTTTCCCTTCGTTTATTTCA+TGG | - | chr3.1:69350252-69350271 | MS.gene79081:intron | 35.0% | |
| GAAACACTTCACTTCCATAA+TGG | - | chr3.1:69351622-69351641 | MS.gene79081:intron | 35.0% | |
| GGTATAATATCTGATCGCTA+TGG | - | chr3.1:69350578-69350597 | MS.gene79081:intron | 35.0% | |
| GTTTGGCATACACAATATGT+AGG | - | chr3.1:69352458-69352477 | MS.gene79081:intron | 35.0% | |
| TATCGCTCGTGAATCATAAT+TGG | + | chr3.1:69352617-69352636 | None:intergenic | 35.0% | |
| TCTTAGCACAAATCTATGGA+TGG | - | chr3.1:69350749-69350768 | MS.gene79081:intron | 35.0% | |
| TGAGAGGCCAATTTAGAAAT+AGG | + | chr3.1:69351735-69351754 | None:intergenic | 35.0% | |
| TTATCCCAAAAGGAATCCTT+TGG | + | chr3.1:69351282-69351301 | None:intergenic | 35.0% | |
| TTTCAATATTGCAGAAAGCG+AGG | - | chr3.1:69350397-69350416 | MS.gene79081:intron | 35.0% | |
| TTTCTAAACCATTCAGGTAC+CGG | - | chr3.1:69352282-69352301 | MS.gene79081:CDS | 35.0% | |
| TTTGCCCTGAATGTTATTGA+AGG | - | chr3.1:69353479-69353498 | MS.gene79081:CDS | 35.0% | |
| ! | GAATCCTTTGGAAATAGATG+TGG | + | chr3.1:69351270-69351289 | None:intergenic | 35.0% |
| ! | GCAAACAACATTGTTGTTAC+AGG | + | chr3.1:69350695-69350714 | None:intergenic | 35.0% |
| ! | TGTTCTAAACTCTTCAATGG+TGG | - | chr3.1:69353340-69353359 | MS.gene79081:intron | 35.0% |
| !! | ACATGTTGATTTGGTATGAC+AGG | - | chr3.1:69352822-69352841 | MS.gene79081:CDS | 35.0% |
| !! | CACAGACTTTTTGCATTGAT+GGG | + | chr3.1:69352335-69352354 | None:intergenic | 35.0% |
| !! | GTCATTTTCAACACGTTGTT+TGG | - | chr3.1:69350726-69350745 | MS.gene79081:intron | 35.0% |
| !! | TTGGTCTTAGCACAAATCTA+TGG | - | chr3.1:69350745-69350764 | MS.gene79081:intron | 35.0% |
| AACTCAAGAGTTGCAGTATG+AGG | + | chr3.1:69350315-69350334 | None:intergenic | 40.0% | |
| AATTGCCTGCATTTGGTTAC+CGG | - | chr3.1:69351507-69351526 | MS.gene79081:intron | 40.0% | |
| ACAGGAACAACATCAAAGAG+GGG | - | chr3.1:69352840-69352859 | MS.gene79081:intron | 40.0% | |
| ACATGAAGTCATGCTTTCCT+TGG | - | chr3.1:69350643-69350662 | MS.gene79081:CDS | 40.0% | |
| ACTCAAGAGTTGCAGTATGA+GGG | + | chr3.1:69350314-69350333 | None:intergenic | 40.0% | |
| ACTTTGACATCTATACCGTG+GGG | - | chr3.1:69350557-69350576 | MS.gene79081:intron | 40.0% | |
| AGTATATAGCTTGAAGGCCA+AGG | + | chr3.1:69350663-69350682 | None:intergenic | 40.0% | |
| ATAGCCCCTAATGTTATAGC+TGG | + | chr3.1:69350611-69350630 | None:intergenic | 40.0% | |
| ATAGTAGACAAAGGTTAGGG+AGG | + | chr3.1:69351020-69351039 | None:intergenic | 40.0% | |
| ATAGTCGCATGGTATGAAGA+GGG | + | chr3.1:69351570-69351589 | None:intergenic | 40.0% | |
| ATGAGATAACAGCTAATGGG+AGG | + | chr3.1:69352752-69352771 | None:intergenic | 40.0% | |
| ATGATTCACGAGCGATATTG+AGG | - | chr3.1:69352620-69352639 | MS.gene79081:intron | 40.0% | |
| ATTAAGCTGAGCATCATACC+TGG | + | chr3.1:69353213-69353232 | None:intergenic | 40.0% | |
| CCATCAATGCAAAAAGTCTG+TGG | - | chr3.1:69352333-69352352 | MS.gene79081:intron | 40.0% | |
| CGATCAGATATTATACCCCA+CGG | + | chr3.1:69350575-69350594 | None:intergenic | 40.0% | |
| CTAAACTCTTCAATGGTGGT+AGG | - | chr3.1:69353344-69353363 | MS.gene79081:intron | 40.0% | |
| CTTGATCAACCTTACAACCA+GGG | + | chr3.1:69350051-69350070 | None:intergenic | 40.0% | |
| GAACTTTGACATCTATACCG+TGG | - | chr3.1:69350555-69350574 | MS.gene79081:intron | 40.0% | |
| GAAGATATAAGCGCTTATGC+AGG | - | chr3.1:69350419-69350438 | MS.gene79081:intron | 40.0% | |
| GACAGGAACAACATCAAAGA+GGG | - | chr3.1:69352839-69352858 | MS.gene79081:intron | 40.0% | |
| GATTAGCATGGTCACAAAAG+CGG | - | chr3.1:69353169-69353188 | MS.gene79081:intron | 40.0% | |
| GGAACAGGAAAATCATGAAG+TGG | + | chr3.1:69351822-69351841 | None:intergenic | 40.0% | |
| GGAAGTTTAAATGGTCTGCT+GGG | - | chr3.1:69350795-69350814 | MS.gene79081:intron | 40.0% | |
| GGCAATGTTCTTGCAATATC+AGG | - | chr3.1:69352015-69352034 | MS.gene79081:intron | 40.0% | |
| GTACCCACATCTATTTCCAA+AGG | - | chr3.1:69351263-69351282 | MS.gene79081:intron | 40.0% | |
| GTATCACAAGCACAAACATG+TGG | + | chr3.1:69353098-69353117 | None:intergenic | 40.0% | |
| GTTGATCAAGCCAAAGAACT+TGG | - | chr3.1:69350061-69350080 | MS.gene79081:CDS | 40.0% | |
| TATAGTCGCATGGTATGAAG+AGG | + | chr3.1:69351571-69351590 | None:intergenic | 40.0% | |
| TATCGTCGTGCTCTATAAAC+TGG | - | chr3.1:69351878-69351897 | MS.gene79081:CDS | 40.0% | |
| TCCAGCATTAGGAGGTTATT+TGG | - | chr3.1:69351130-69351149 | MS.gene79081:intron | 40.0% | |
| TGACAGGAACAACATCAAAG+AGG | - | chr3.1:69352838-69352857 | MS.gene79081:intron | 40.0% | |
| TGAGATAACAGCTAATGGGA+GGG | + | chr3.1:69352751-69352770 | None:intergenic | 40.0% | |
| TGATTCACGAGCGATATTGA+GGG | - | chr3.1:69352621-69352640 | MS.gene79081:intron | 40.0% | |
| TGGAAGTTTAAATGGTCTGC+TGG | - | chr3.1:69350794-69350813 | MS.gene79081:intron | 40.0% | |
| TTAAATGCTTCTTTCCTCCC+AGG | - | chr3.1:69353192-69353211 | MS.gene79081:intron | 40.0% | |
| TTAAGCTGAGCATCATACCT+GGG | + | chr3.1:69353212-69353231 | None:intergenic | 40.0% | |
| TTACAATACCGGTACCTGAA+TGG | + | chr3.1:69352293-69352312 | None:intergenic | 40.0% | |
| TTAGTCATTGGTCCAGCATT+AGG | - | chr3.1:69351119-69351138 | MS.gene79081:intron | 40.0% | |
| TTCAAAACAATAGGTCCTGC+TGG | - | chr3.1:69352898-69352917 | MS.gene79081:intron | 40.0% | |
| ! | ATTAGGAGGTTATTTGGCTC+AGG | - | chr3.1:69351136-69351155 | MS.gene79081:intron | 40.0% |
| ! | CCACAGACTTTTTGCATTGA+TGG | + | chr3.1:69352336-69352355 | None:intergenic | 40.0% |
| ! | GTAGTACTTTTGTTGGACGT+AGG | - | chr3.1:69352672-69352691 | MS.gene79081:intron | 40.0% |
| ! | TTGATGGGTACAAAGAAAGC+TGG | + | chr3.1:69352320-69352339 | None:intergenic | 40.0% |
| !! | ATATGGATCGCGGTTTTATG+TGG | - | chr3.1:69350115-69350134 | MS.gene79081:intron | 40.0% |
| !! | TGTGATCTGATTTCAGGTTG+TGG | - | chr3.1:69351079-69351098 | MS.gene79081:intron | 40.0% |
| AAAACAATAGGTCCTGCTGG+AGG | - | chr3.1:69352901-69352920 | MS.gene79081:intron | 45.0% | |
| AAACTGGCGTTTCATCGAAG+TGG | - | chr3.1:69351894-69351913 | MS.gene79081:CDS | 45.0% | |
| AAGGGGTAACTTTGCAAGAG+GGG | + | chr3.1:69352495-69352514 | None:intergenic | 45.0% | |
| AATGTGGAAGCTGCAGAAGT+TGG | - | chr3.1:69351664-69351683 | MS.gene79081:intron | 45.0% | |
| ACATACCGGTAACCAAATGC+AGG | + | chr3.1:69351515-69351534 | None:intergenic | 45.0% | |
| AGCGCTTATGCAGGTTATGT+AGG | - | chr3.1:69350428-69350447 | MS.gene79081:intron | 45.0% | |
| CAATGAGTCCACTGACAATG+TGG | - | chr3.1:69351648-69351667 | MS.gene79081:intron | 45.0% | |
| CAGACAGTGATGTCATGAAG+GGG | + | chr3.1:69352512-69352531 | None:intergenic | 45.0% | |
| CAGTAGCAATTGCCTGCATT+TGG | - | chr3.1:69351500-69351519 | MS.gene79081:intron | 45.0% | |
| CCAGACAGTGATGTCATGAA+GGG | + | chr3.1:69352513-69352532 | None:intergenic | 45.0% | |
| CCTTCTGCAAAATAGAGCAG+TGG | - | chr3.1:69352717-69352736 | MS.gene79081:intron | 45.0% | |
| GAAGGGGTAACTTTGCAAGA+GGG | + | chr3.1:69352496-69352515 | None:intergenic | 45.0% | |
| GCAGGATCTTCATACATGCT+TGG | - | chr3.1:69350530-69350549 | MS.gene79081:intron | 45.0% | |
| GCCAAATAACCTCCTAATGC+TGG | + | chr3.1:69351134-69351153 | None:intergenic | 45.0% | |
| GCTTGATCAACCTTACAACC+AGG | + | chr3.1:69350052-69350071 | None:intergenic | 45.0% | |
| GTAACTTTGCAAGAGGGGTA+TGG | + | chr3.1:69352490-69352509 | None:intergenic | 45.0% | |
| TAATATACGCAGCAGAGGGT+TGG | + | chr3.1:69351843-69351862 | None:intergenic | 45.0% | |
| TGAAGGGGTAACTTTGCAAG+AGG | + | chr3.1:69352497-69352516 | None:intergenic | 45.0% | |
| TGAGAATTGCCCTGGTTGTA+AGG | - | chr3.1:69350039-69350058 | MS.gene79081:CDS | 45.0% | |
| TGGACTCATTGCTGCCATTA+TGG | + | chr3.1:69351639-69351658 | None:intergenic | 45.0% | |
| TGGGGAGTAGGTTTAGTCAT+TGG | - | chr3.1:69351107-69351126 | MS.gene79081:intron | 45.0% | |
| TTAACCTTGCTCGCATTGCT+GGG | - | chr3.1:69352361-69352380 | MS.gene79081:intron | 45.0% | |
| ! | CCACTGCTCTATTTTGCAGA+AGG | + | chr3.1:69352720-69352739 | None:intergenic | 45.0% |
| !! | ATTTCAGGTTGTGGCAGCTT+GGG | - | chr3.1:69351088-69351107 | MS.gene79081:intron | 45.0% |
| AAGGGAAAGAGCGATGCAAG+GGG | + | chr3.1:69350241-69350260 | None:intergenic | 50.0% | |
| AGATGTGGGTACTTCAGTGC+TGG | + | chr3.1:69351255-69351274 | None:intergenic | 50.0% | |
| AGTTCAAACCGCCCAACCTT+CGG | + | chr3.1:69351978-69351997 | None:intergenic | 50.0% | |
| CATCAAAGAGGGGCAGCTAA+TGG | - | chr3.1:69352850-69352869 | MS.gene79081:intron | 50.0% | |
| CCCTTCATGACATCACTGTC+TGG | - | chr3.1:69352510-69352529 | MS.gene79081:intron | 50.0% | |
| GAAGGGAAAGAGCGATGCAA+GGG | + | chr3.1:69350242-69350261 | None:intergenic | 50.0% | |
| GCAATGCGAGCAAGGTTAAC+AGG | + | chr3.1:69352360-69352379 | None:intergenic | 50.0% | |
| GCCAGACAGTGATGTCATGA+AGG | + | chr3.1:69352514-69352533 | None:intergenic | 50.0% | |
| GTCATTGGTCCAGCATTAGG+AGG | - | chr3.1:69351122-69351141 | MS.gene79081:intron | 50.0% | |
| GTTAACCTTGCTCGCATTGC+TGG | - | chr3.1:69352360-69352379 | MS.gene79081:intron | 50.0% | |
| TAACCTTGCTCGCATTGCTG+GGG | - | chr3.1:69352362-69352381 | MS.gene79081:intron | 50.0% | |
| TGCAGCTTCCACATTGTCAG+TGG | + | chr3.1:69351659-69351678 | None:intergenic | 50.0% | |
| TGGTCTGCTGGGACCTATAA+AGG | - | chr3.1:69350806-69350825 | MS.gene79081:intron | 50.0% | |
| ! | TAGGGAGGCATACTGTTGAG+AGG | + | chr3.1:69351005-69351024 | None:intergenic | 50.0% |
| !! | GATTTCAGGTTGTGGCAGCT+TGG | - | chr3.1:69351087-69351106 | MS.gene79081:intron | 50.0% |
| !! | GCTCGGTGTGATCTGATTTC+AGG | - | chr3.1:69351073-69351092 | MS.gene79081:intron | 50.0% |
| !! | TTTCAGGTTGTGGCAGCTTG+GGG | - | chr3.1:69351089-69351108 | MS.gene79081:intron | 50.0% |
| AAAGAGCGATGCAAGGGGCA+AGG | + | chr3.1:69350236-69350255 | None:intergenic | 55.0% | |
| ACAATAGGTCCTGCTGGAGG+CGG | - | chr3.1:69352904-69352923 | MS.gene79081:intron | 55.0% | |
| AGCTGAGCATCATACCTGGG+AGG | + | chr3.1:69353209-69353228 | None:intergenic | 55.0% | |
| CGAAGGGAAAGAGCGATGCA+AGG | + | chr3.1:69350243-69350262 | None:intergenic | 55.0% | |
| GTGTGTGCGTGTATCACTGC+AGG | - | chr3.1:69351600-69351619 | MS.gene79081:intron | 55.0% | |
| GTTCAAACCGCCCAACCTTC+GGG | + | chr3.1:69351977-69351996 | None:intergenic | 55.0% | |
| TAACCCCAGCAATGCGAGCA+AGG | + | chr3.1:69352368-69352387 | None:intergenic | 55.0% | |
| TTCAAACCGCCCAACCTTCG+GGG | + | chr3.1:69351976-69351995 | None:intergenic | 55.0% | |
| ACGCAGCAGAGGGTTGGAAC+AGG | + | chr3.1:69351837-69351856 | None:intergenic | 60.0% | |
| GCTGTCAGTCCCCGAAGGTT+GGG | - | chr3.1:69351964-69351983 | MS.gene79081:intron | 60.0% | |
| GTTGTGGCAGCTTGGGGAGT+AGG | - | chr3.1:69351095-69351114 | MS.gene79081:intron | 60.0% | |
| ! | TATGGGCTGTCAGTCCCCGA+AGG | - | chr3.1:69351959-69351978 | MS.gene79081:intron | 60.0% |
| !! | GGGTACTTCAGTGCTGGCTG+TGG | + | chr3.1:69351249-69351268 | None:intergenic | 60.0% |
| CACAATGCACCGCCTCCAGC+AGG | + | chr3.1:69352916-69352935 | None:intergenic | 65.0% | |
| GGCTGTCAGTCCCCGAAGGT+TGG | - | chr3.1:69351963-69351982 | MS.gene79081:intron | 65.0% | |
| GTCAGTCCCCGAAGGTTGGG+CGG | - | chr3.1:69351967-69351986 | MS.gene79081:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 69349992 | 69353574 | 69349992 | ID=MS.gene79081 |
| chr3.1 | mRNA | 69349992 | 69353574 | 69349992 | ID=MS.gene79081.t1;Parent=MS.gene79081 |
| chr3.1 | exon | 69353427 | 69353574 | 69353427 | ID=MS.gene79081.t1.exon1;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69353427 | 69353574 | 69353427 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69353293 | 69353333 | 69353293 | ID=MS.gene79081.t1.exon2;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69353293 | 69353333 | 69353293 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69353117 | 69353177 | 69353117 | ID=MS.gene79081.t1.exon3;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69353117 | 69353177 | 69353117 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69352930 | 69353032 | 69352930 | ID=MS.gene79081.t1.exon4;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69352930 | 69353032 | 69352930 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69352739 | 69352841 | 69352739 | ID=MS.gene79081.t1.exon5;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69352739 | 69352841 | 69352739 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69352555 | 69352608 | 69352555 | ID=MS.gene79081.t1.exon6;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69352555 | 69352608 | 69352555 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69352409 | 69352471 | 69352409 | ID=MS.gene79081.t1.exon7;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69352409 | 69352471 | 69352409 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69352265 | 69352314 | 69352265 | ID=MS.gene79081.t1.exon8;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69352265 | 69352314 | 69352265 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69352038 | 69352113 | 69352038 | ID=MS.gene79081.t1.exon9;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69352038 | 69352113 | 69352038 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69351756 | 69351944 | 69351756 | ID=MS.gene79081.t1.exon10;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69351756 | 69351944 | 69351756 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69351530 | 69351617 | 69351530 | ID=MS.gene79081.t1.exon11;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69351530 | 69351617 | 69351530 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69351183 | 69351268 | 69351183 | ID=MS.gene79081.t1.exon12;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69351183 | 69351268 | 69351183 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69350979 | 69351086 | 69350979 | ID=MS.gene79081.t1.exon13;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69350979 | 69351086 | 69350979 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69350828 | 69350872 | 69350828 | ID=MS.gene79081.t1.exon14;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69350828 | 69350872 | 69350828 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69350634 | 69350722 | 69350634 | ID=MS.gene79081.t1.exon15;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69350634 | 69350722 | 69350634 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69350353 | 69350396 | 69350353 | ID=MS.gene79081.t1.exon16;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69350353 | 69350396 | 69350353 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| chr3.1 | exon | 69349992 | 69350104 | 69349992 | ID=MS.gene79081.t1.exon17;Parent=MS.gene79081.t1 |
| chr3.1 | CDS | 69349992 | 69350104 | 69349992 | ID=cds.MS.gene79081.t1;Parent=MS.gene79081.t1 |
| Gene Sequence |
| Protein sequence |
