Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75533.t1 | XP_004502380.1 | 88.3 | 486 | 57 | 0 | 1 | 486 | 1 | 486 | 2.70E-249 | 870.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75533.t1 | Q8RWN2 | 57.4 | 481 | 198 | 3 | 1 | 474 | 1 | 481 | 2.4e-153 | 543.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75533.t1 | A0A1S2YBH2 | 88.3 | 486 | 57 | 0 | 1 | 486 | 1 | 486 | 2.0e-249 | 870.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75533.t1 | MTR_3g086440 | 94.493 | 454 | 25 | 0 | 1 | 454 | 1 | 454 | 0.0 | 853 |
| MS.gene75533.t1 | MTR_8g062990 | 74.127 | 487 | 125 | 1 | 1 | 486 | 1 | 487 | 0.0 | 758 |
| MS.gene75533.t1 | MTR_3g010820 | 73.101 | 487 | 130 | 1 | 1 | 486 | 1 | 487 | 0.0 | 751 |
| MS.gene75533.t1 | MTR_8g042770 | 69.610 | 487 | 147 | 1 | 1 | 486 | 1 | 487 | 0.0 | 733 |
| MS.gene75533.t1 | MTR_8g042780 | 69.854 | 481 | 141 | 2 | 7 | 486 | 3 | 480 | 0.0 | 715 |
| MS.gene75533.t1 | MTR_8g042870 | 68.994 | 487 | 147 | 2 | 1 | 486 | 1 | 484 | 0.0 | 694 |
| MS.gene75533.t1 | MTR_3g010850 | 70.248 | 484 | 139 | 3 | 4 | 486 | 2 | 481 | 0.0 | 688 |
| MS.gene75533.t1 | MTR_8g042780 | 70.766 | 431 | 122 | 2 | 7 | 436 | 3 | 430 | 0.0 | 649 |
| MS.gene75533.t1 | MTR_3g010850 | 67.442 | 473 | 137 | 5 | 17 | 486 | 11 | 469 | 0.0 | 629 |
| MS.gene75533.t1 | MTR_8g042820 | 69.965 | 283 | 82 | 1 | 153 | 435 | 34 | 313 | 1.10e-148 | 427 |
| MS.gene75533.t1 | MTR_1157s0010 | 67.296 | 159 | 52 | 0 | 328 | 486 | 2 | 160 | 3.35e-73 | 228 |
| MS.gene75533.t1 | MTR_1194s0010 | 68.707 | 147 | 45 | 1 | 7 | 152 | 3 | 149 | 5.38e-68 | 214 |
| MS.gene75533.t1 | MTR_8g075280 | 54.255 | 94 | 26 | 3 | 42 | 134 | 107 | 184 | 2.55e-16 | 78.2 |
| MS.gene75533.t1 | MTR_8g075280 | 35.500 | 200 | 95 | 8 | 31 | 229 | 96 | 262 | 2.72e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75533.t1 | AT5G13750 | 55.858 | 478 | 207 | 2 | 4 | 479 | 3 | 478 | 0.0 | 558 |
| MS.gene75533.t1 | AT5G13740 | 56.790 | 486 | 203 | 3 | 1 | 479 | 1 | 486 | 0.0 | 538 |
| MS.gene75533.t1 | AT3G43790 | 53.653 | 479 | 212 | 4 | 1 | 474 | 1 | 474 | 0.0 | 520 |
| MS.gene75533.t1 | AT3G43790 | 53.653 | 479 | 212 | 4 | 1 | 474 | 1 | 474 | 0.0 | 520 |
| MS.gene75533.t1 | AT3G43790 | 52.990 | 485 | 212 | 5 | 1 | 474 | 1 | 480 | 4.89e-180 | 513 |
| MS.gene75533.t1 | AT3G43790 | 52.990 | 485 | 212 | 5 | 1 | 474 | 1 | 480 | 4.89e-180 | 513 |
| MS.gene75533.t1 | AT5G13740 | 56.561 | 442 | 185 | 3 | 1 | 435 | 1 | 442 | 3.52e-173 | 494 |
| MS.gene75533.t1 | AT5G13750 | 54.258 | 411 | 184 | 2 | 4 | 412 | 3 | 411 | 5.98e-163 | 467 |
| MS.gene75533.t1 | AT5G13750 | 54.258 | 411 | 184 | 2 | 4 | 412 | 3 | 411 | 5.98e-163 | 467 |
| MS.gene75533.t1 | AT5G13750 | 56.345 | 394 | 168 | 2 | 88 | 479 | 1 | 392 | 1.18e-160 | 461 |
| MS.gene75533.t1 | AT3G43790 | 53.171 | 410 | 182 | 4 | 1 | 405 | 1 | 405 | 3.12e-150 | 435 |
| MS.gene75533.t1 | AT5G13940 | 44.578 | 83 | 30 | 1 | 274 | 356 | 11 | 77 | 1.81e-14 | 76.6 |
| MS.gene75533.t1 | AT5G13940 | 44.578 | 83 | 30 | 1 | 274 | 356 | 162 | 228 | 2.22e-14 | 76.3 |
Find 117 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATTCTGAAGTTTCTTA+TGG | 0.159088 | 3.1:+69292574 | MS.gene75533:CDS |
| ATGAAAGCCTATTTCTAAAT+TGG | 0.204663 | 3.1:+69291736 | MS.gene75533:CDS |
| CTTTCCCTTCGTTTATTTCA+TGG | 0.216855 | 3.1:+69290263 | MS.gene75533:CDS |
| GTTAACCTTGCTCGCATTGC+TGG | 0.221970 | 3.1:+69292371 | MS.gene75533:CDS |
| TTTCTTCTTGGAAGTTTAAA+TGG | 0.254939 | 3.1:+69290797 | MS.gene75533:CDS |
| TCCAGCATTAGGAGGTTATT+TGG | 0.275455 | 3.1:+69291141 | MS.gene75533:CDS |
| TGAGAGGCCAATTTAGAAAT+AGG | 0.275927 | 3.1:-69291743 | None:intergenic |
| CAAGTCCTTCAATAACATTC+AGG | 0.283968 | 3.1:-69293495 | None:intergenic |
| GGCAATGTTCTTGCAATATC+AGG | 0.291727 | 3.1:+69292026 | MS.gene75533:CDS |
| ATTTCAGGTTGTGGCAGCTT+GGG | 0.294108 | 3.1:+69291099 | MS.gene75533:intron |
| AACATCTGTTCCAAGTTCTT+TGG | 0.296273 | 3.1:-69290082 | None:intergenic |
| AGAGAAGAAAATCAAGCTTT+AGG | 0.302771 | 3.1:+69290990 | MS.gene75533:CDS |
| TCCATTCTGAAGTTTCTTAT+GGG | 0.311221 | 3.1:+69292575 | MS.gene75533:CDS |
| TGGACTCATTGCTGCCATTA+TGG | 0.312526 | 3.1:-69291647 | None:intergenic |
| AGAAAACCAGCTATAACATT+AGG | 0.313041 | 3.1:+69290613 | MS.gene75533:CDS |
| AATTGCCTGCATTTGGTTAC+CGG | 0.324014 | 3.1:+69291518 | MS.gene75533:CDS |
| GTTCAAACCGCCCAACCTTC+GGG | 0.329711 | 3.1:-69291985 | None:intergenic |
| TATTTCCAAAGGATTCCTTT+TGG | 0.332250 | 3.1:+69291285 | MS.gene75533:CDS |
| TTAGTCATTGGTCCAGCATT+AGG | 0.338459 | 3.1:+69291130 | MS.gene75533:CDS |
| CAATATTTATCACAAGGTAT+AGG | 0.357155 | 3.1:-69292550 | None:intergenic |
| TGGTCTGCTGGGACCTATAA+AGG | 0.359430 | 3.1:+69290817 | MS.gene75533:CDS |
| GAAAACCAGCTATAACATTA+GGG | 0.360625 | 3.1:+69290614 | MS.gene75533:CDS |
| TTATCCCAAAAGGAATCCTT+TGG | 0.364927 | 3.1:-69291290 | None:intergenic |
| GCAATGCGAGCAAGGTTAAC+AGG | 0.369231 | 3.1:-69292368 | None:intergenic |
| TTAACCTTGCTCGCATTGCT+GGG | 0.372906 | 3.1:+69292372 | MS.gene75533:CDS |
| TTGGTCTTAGCACAAATCTA+TGG | 0.392600 | 3.1:+69290756 | MS.gene75533:CDS |
| ATCAGCATGAGATTTCTTCT+TGG | 0.396540 | 3.1:+69290785 | MS.gene75533:CDS |
| CAGTAGCAATTGCCTGCATT+TGG | 0.397297 | 3.1:+69291511 | MS.gene75533:CDS |
| AGTTCAAACCGCCCAACCTT+CGG | 0.398585 | 3.1:-69291986 | None:intergenic |
| AATATTTATCACAAGGTATA+GGG | 0.399448 | 3.1:-69292549 | None:intergenic |
| GGCTGTCAGTCCCCGAAGGT+TGG | 0.407548 | 3.1:+69291974 | MS.gene75533:CDS |
| GATTTCAGGTTGTGGCAGCT+TGG | 0.411318 | 3.1:+69291098 | MS.gene75533:intron |
| GTTGTGGCAGCTTGGGGAGT+AGG | 0.417626 | 3.1:+69291106 | MS.gene75533:CDS |
| TTTGCCCTGAATGTTATTGA+AGG | 0.426862 | 3.1:+69293490 | MS.gene75533:CDS |
| TGGAAGTTTAAATGGTCTGC+TGG | 0.431629 | 3.1:+69290805 | MS.gene75533:CDS |
| TGGGGAGTAGGTTTAGTCAT+TGG | 0.434684 | 3.1:+69291118 | MS.gene75533:CDS |
| GCTGTCAGTCCCCGAAGGTT+GGG | 0.444834 | 3.1:+69291975 | MS.gene75533:CDS |
| CTGAATGTTATTGAAGGACT+TGG | 0.449350 | 3.1:+69293496 | MS.gene75533:CDS |
| GAAACACTTCACTTCCATAA+TGG | 0.459858 | 3.1:+69291633 | MS.gene75533:CDS |
| GTTGATCAAGCCAAAGAACT+TGG | 0.459865 | 3.1:+69290072 | MS.gene75533:CDS |
| CCCTTCATGACATCACTGTC+TGG | 0.465408 | 3.1:+69292521 | MS.gene75533:CDS |
| AACTTTACAACTAATGATGT+TGG | 0.466950 | 3.1:+69292005 | MS.gene75533:CDS |
| CATCAAAGAGGGGCAGCTAA+TGG | 0.467466 | 3.1:+69292861 | MS.gene75533:CDS |
| ATTAGGAGGTTATTTGGCTC+AGG | 0.468503 | 3.1:+69291147 | MS.gene75533:CDS |
| ATGTCAGCATTCAAAACAAT+AGG | 0.475779 | 3.1:+69292900 | MS.gene75533:CDS |
| TTCAAAACAATAGGTCCTGC+TGG | 0.479484 | 3.1:+69292909 | MS.gene75533:CDS |
| TATCACTGTAACTGCTCCAT+TGG | 0.480668 | 3.1:-69293565 | None:intergenic |
| ATAGCCCCTAATGTTATAGC+TGG | 0.485296 | 3.1:-69290619 | None:intergenic |
| GCCAAATAACCTCCTAATGC+TGG | 0.486167 | 3.1:-69291142 | None:intergenic |
| ACGTAGGAAACAATTTCAAC+TGG | 0.489140 | 3.1:+69292699 | MS.gene75533:intron |
| AAAAGCTGATATTACAAAGC+AGG | 0.491657 | 3.1:-69291481 | None:intergenic |
| ATCTACTTACTTATCCCAAA+AGG | 0.496556 | 3.1:-69291300 | None:intergenic |
| TGAGAATTGCCCTGGTTGTA+AGG | 0.498333 | 3.1:+69290050 | MS.gene75533:CDS |
| TGCAGCTTCCACATTGTCAG+TGG | 0.500042 | 3.1:-69291667 | None:intergenic |
| GTAACTTTGCAAGAGGGGTA+TGG | 0.502323 | 3.1:-69292498 | None:intergenic |
| TTAAATGCTTCTTTCCTCCC+AGG | 0.509352 | 3.1:+69293203 | MS.gene75533:CDS |
| CACAATGCACCGCCTCCAGC+AGG | 0.514119 | 3.1:-69292924 | None:intergenic |
| AAGTCCTTCAATAACATTCA+GGG | 0.515694 | 3.1:-69293494 | None:intergenic |
| GCCAGACAGTGATGTCATGA+AGG | 0.527185 | 3.1:-69292522 | None:intergenic |
| AAGTATTATGAGAATTGCCC+TGG | 0.529432 | 3.1:+69290042 | MS.gene75533:CDS |
| TTTCAGGTTGTGGCAGCTTG+GGG | 0.529821 | 3.1:+69291100 | MS.gene75533:intron |
| AATGTGGAAGCTGCAGAAGT+TGG | 0.533488 | 3.1:+69291675 | MS.gene75533:CDS |
| AAAGAGCGATGCAAGGGGCA+AGG | 0.535798 | 3.1:-69290244 | None:intergenic |
| GCAGGATCTTCATACATGCT+TGG | 0.536139 | 3.1:+69290541 | MS.gene75533:intron |
| AACTTTGACATCTATACCGT+GGG | 0.537488 | 3.1:+69290567 | MS.gene75533:CDS |
| GAAGGGAAAGAGCGATGCAA+GGG | 0.540991 | 3.1:-69290250 | None:intergenic |
| TTGATTAATGCAGATTAGCA+TGG | 0.549107 | 3.1:+69293168 | MS.gene75533:intron |
| GGAAGTTTAAATGGTCTGCT+GGG | 0.551066 | 3.1:+69290806 | MS.gene75533:CDS |
| GAATCCTTTGGAAATAGATG+TGG | 0.557408 | 3.1:-69291278 | None:intergenic |
| GTCAGTCCCCGAAGGTTGGG+CGG | 0.562567 | 3.1:+69291978 | MS.gene75533:CDS |
| AAGCTGGTATATTACAATAC+CGG | 0.563081 | 3.1:-69292312 | None:intergenic |
| GACAGGAACAACATCAAAGA+GGG | 0.566186 | 3.1:+69292850 | MS.gene75533:intron |
| GTCATTGGTCCAGCATTAGG+AGG | 0.567266 | 3.1:+69291133 | MS.gene75533:CDS |
| TTGATGGGTACAAAGAAAGC+TGG | 0.571034 | 3.1:-69292328 | None:intergenic |
| GAAGATATAAGCGCTTATGC+AGG | 0.572013 | 3.1:+69290430 | MS.gene75533:CDS |
| ACCCATAAGAAACTTCAGAA+TGG | 0.574517 | 3.1:-69292576 | None:intergenic |
| TAACCCCAGCAATGCGAGCA+AGG | 0.577012 | 3.1:-69292376 | None:intergenic |
| ACAATAGGTCCTGCTGGAGG+CGG | 0.577291 | 3.1:+69292915 | MS.gene75533:CDS |
| GCTTGATCAACCTTACAACC+AGG | 0.582705 | 3.1:-69290060 | None:intergenic |
| TCATGACATTACTTATCAAG+AGG | 0.583695 | 3.1:+69291800 | MS.gene75533:CDS |
| AGATGTGGGTACTTCAGTGC+TGG | 0.587132 | 3.1:-69291263 | None:intergenic |
| AAAGCTGATATTACAAAGCA+GGG | 0.587471 | 3.1:-69291480 | None:intergenic |
| CCAGACAGTGATGTCATGAA+GGG | 0.591088 | 3.1:-69292521 | None:intergenic |
| AAGGGGTAACTTTGCAAGAG+GGG | 0.594121 | 3.1:-69292503 | None:intergenic |
| AGCGCTTATGCAGGTTATGT+AGG | 0.599493 | 3.1:+69290439 | MS.gene75533:CDS |
| TAACCTTGCTCGCATTGCTG+GGG | 0.603249 | 3.1:+69292373 | MS.gene75533:CDS |
| GGTATAATATCTGATCGCTA+TGG | 0.603660 | 3.1:+69290589 | MS.gene75533:CDS |
| CGAAGGGAAAGAGCGATGCA+AGG | 0.604024 | 3.1:-69290251 | None:intergenic |
| CTCACCATGAAATAAACGAA+GGG | 0.609116 | 3.1:-69290267 | None:intergenic |
| TCTTAGCACAAATCTATGGA+TGG | 0.609413 | 3.1:+69290760 | MS.gene75533:CDS |
| ACATACCGGTAACCAAATGC+AGG | 0.615558 | 3.1:-69291523 | None:intergenic |
| TATGGGCTGTCAGTCCCCGA+AGG | 0.617694 | 3.1:+69291970 | MS.gene75533:CDS |
| GTACCCACATCTATTTCCAA+AGG | 0.617843 | 3.1:+69291274 | MS.gene75533:CDS |
| TTTCAATATTGCAGAAAGCG+AGG | 0.620341 | 3.1:+69290408 | MS.gene75533:CDS |
| CAATGAGTCCACTGACAATG+TGG | 0.626071 | 3.1:+69291659 | MS.gene75533:CDS |
| GAAGGGGTAACTTTGCAAGA+GGG | 0.628765 | 3.1:-69292504 | None:intergenic |
| AATCCTTTGGAAATAGATGT+GGG | 0.630063 | 3.1:-69291277 | None:intergenic |
| TTCAAACCGCCCAACCTTCG+GGG | 0.632663 | 3.1:-69291984 | None:intergenic |
| TGAAGGGGTAACTTTGCAAG+AGG | 0.633111 | 3.1:-69292505 | None:intergenic |
| ATTTATCACAAGGTATAGGG+TGG | 0.636330 | 3.1:-69292546 | None:intergenic |
| ACTCACCATGAAATAAACGA+AGG | 0.641568 | 3.1:-69290268 | None:intergenic |
| TGACAGGAACAACATCAAAG+AGG | 0.644505 | 3.1:+69292849 | MS.gene75533:intron |
| CGATCAGATATTATACCCCA+CGG | 0.645888 | 3.1:-69290583 | None:intergenic |
| GATTAGCATGGTCACAAAAG+CGG | 0.646524 | 3.1:+69293180 | MS.gene75533:intron |
| CCTTCTGCAAAATAGAGCAG+TGG | 0.647097 | 3.1:+69292728 | MS.gene75533:CDS |
| CTTGATCAACCTTACAACCA+GGG | 0.653325 | 3.1:-69290059 | None:intergenic |
| TAGGGAGGCATACTGTTGAG+AGG | 0.657706 | 3.1:-69291013 | None:intergenic |
| TGGAAGCAATATTTATCACA+AGG | 0.662225 | 3.1:-69292556 | None:intergenic |
| GAACTTTGACATCTATACCG+TGG | 0.663827 | 3.1:+69290566 | MS.gene75533:CDS |
| ACAATAATAGATGACATGAG+AGG | 0.666864 | 3.1:-69291759 | None:intergenic |
| AAAACCAGCTATAACATTAG+GGG | 0.672817 | 3.1:+69290615 | MS.gene75533:CDS |
| AAGGGAAAGAGCGATGCAAG+GGG | 0.674212 | 3.1:-69290249 | None:intergenic |
| CAGACAGTGATGTCATGAAG+GGG | 0.692739 | 3.1:-69292520 | None:intergenic |
| AGCTGAGCATCATACCTGGG+AGG | 0.706338 | 3.1:-69293217 | None:intergenic |
| AAAACAATAGGTCCTGCTGG+AGG | 0.707613 | 3.1:+69292912 | MS.gene75533:CDS |
| ACAGGAACAACATCAAAGAG+GGG | 0.726956 | 3.1:+69292851 | MS.gene75533:intron |
| ACTTTGACATCTATACCGTG+GGG | 0.792620 | 3.1:+69290568 | MS.gene75533:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTAAATATATTTATTTTC+AGG | + | chr3.1:69290378-69290397 | MS.gene75533:intron | 10.0% |
| !!! | TTTAGATATTCATTAATTTT+GGG | + | chr3.1:69292072-69292091 | MS.gene75533:intron | 10.0% |
| !! | TAAAAAAATTTAAAGAGTCA+AGG | - | chr3.1:69291392-69291411 | None:intergenic | 15.0% |
| !! | TCATTTATACTAATTCAAAT+AGG | + | chr3.1:69290504-69290523 | MS.gene75533:intron | 15.0% |
| !!! | ATATTGTTATATCTTTTTCT+CGG | + | chr3.1:69292111-69292130 | MS.gene75533:intron | 15.0% |
| !!! | ATTTTTGTTTAATAGCAAAA+GGG | - | chr3.1:69291195-69291214 | None:intergenic | 15.0% |
| !!! | CTTTAGATATTCATTAATTT+TGG | + | chr3.1:69292071-69292090 | MS.gene75533:intron | 15.0% |
| !! | AAGAGGGAAAAATAAAAATA+TGG | - | chr3.1:69291565-69291584 | None:intergenic | 20.0% |
| !! | AATATTTATCACAAGGTATA+GGG | - | chr3.1:69292552-69292571 | None:intergenic | 20.0% |
| !! | ACTATGTCATAAAAAAAACT+TGG | - | chr3.1:69293053-69293072 | None:intergenic | 20.0% |
| !! | GTTTGAATTATTTGCTTAAT+AGG | + | chr3.1:69293270-69293289 | MS.gene75533:intron | 20.0% |
| !! | TAAACAAAAAAGATATCAGA+GGG | - | chr3.1:69290212-69290231 | None:intergenic | 20.0% |
| !! | TTAAACAAAAAAGATATCAG+AGG | - | chr3.1:69290213-69290232 | None:intergenic | 20.0% |
| !! | TTTCTATACAAATAAGGATA+TGG | + | chr3.1:69293397-69293416 | MS.gene75533:intron | 20.0% |
| !!! | AATTTGCTCTAGTAAAAAAA+TGG | - | chr3.1:69292232-69292251 | None:intergenic | 20.0% |
| !!! | ACATATATAACATGTTGATT+TGG | + | chr3.1:69292824-69292843 | MS.gene75533:intron | 20.0% |
| !!! | ACTATTTTACATTTAACTGT+AGG | + | chr3.1:69293451-69293470 | MS.gene75533:intron | 20.0% |
| !!! | AGGTGATAAAGAATAAATTT+TGG | + | chr3.1:69291167-69291186 | MS.gene75533:intron | 20.0% |
| !!! | ATATATTTATTTTCAGGTAG+AGG | + | chr3.1:69290384-69290403 | MS.gene75533:intron | 20.0% |
| !!! | GATTTTTGTTTAATAGCAAA+AGG | - | chr3.1:69291196-69291215 | None:intergenic | 20.0% |
| !!! | TAATACTTTTTGTTCAACAA+TGG | - | chr3.1:69290030-69290049 | None:intergenic | 20.0% |
| !!! | TACTTTTTTTTATGGAATTG+TGG | + | chr3.1:69292800-69292819 | MS.gene75533:intron | 20.0% |
| !!! | TGAGATCATACTTTTTTTTA+TGG | + | chr3.1:69292792-69292811 | MS.gene75533:intron | 20.0% |
| !!! | TTCGAAATCTTTCTTTTATA+TGG | + | chr3.1:69290109-69290128 | MS.gene75533:CDS | 20.0% |
| !!! | TTTGAATTTGTGTCATTTTA+TGG | + | chr3.1:69290875-69290894 | MS.gene75533:intron | 20.0% |
| ! | AAATTCCGAATCACAATAAT+TGG | - | chr3.1:69292418-69292437 | None:intergenic | 25.0% |
| ! | AACCTAGTTAAAGAGTAAAA+TGG | - | chr3.1:69291943-69291962 | None:intergenic | 25.0% |
| ! | AACTCTAATTTATTAGCAGA+AGG | + | chr3.1:69292200-69292219 | MS.gene75533:intron | 25.0% |
| ! | AACTTTACAACTAATGATGT+TGG | + | chr3.1:69292005-69292024 | MS.gene75533:CDS | 25.0% |
| ! | ACATATAGTATATAGCTTGA+AGG | - | chr3.1:69290680-69290699 | None:intergenic | 25.0% |
| ! | ACTCTAATTTATTAGCAGAA+GGG | + | chr3.1:69292201-69292220 | MS.gene75533:intron | 25.0% |
| ! | AGAGAAGCAAAATAAATCAA+AGG | - | chr3.1:69292956-69292975 | None:intergenic | 25.0% |
| ! | ATATGCCAATTATTGTGATT+CGG | + | chr3.1:69292410-69292429 | MS.gene75533:intron | 25.0% |
| ! | ATCACAATAATTGGCATATA+CGG | - | chr3.1:69292409-69292428 | None:intergenic | 25.0% |
| ! | CAATATTTATCACAAGGTAT+AGG | - | chr3.1:69292553-69292572 | None:intergenic | 25.0% |
| ! | GAGAAGCAAAATAAATCAAA+GGG | - | chr3.1:69292955-69292974 | None:intergenic | 25.0% |
| ! | GTATAGAAAAACACCTTTAT+AGG | - | chr3.1:69290833-69290852 | None:intergenic | 25.0% |
| ! | TAAAATTGATTGAATCTGCA+GGG | + | chr3.1:69293001-69293020 | MS.gene75533:intron | 25.0% |
| ! | TACAACTTACATTTCAATGT+CGG | - | chr3.1:69292165-69292184 | None:intergenic | 25.0% |
| ! | TCAAAAGCAGAATAAGAAAA+TGG | - | chr3.1:69293152-69293171 | None:intergenic | 25.0% |
| ! | TCAGAGTTTCTATACAAATA+AGG | + | chr3.1:69293391-69293410 | MS.gene75533:intron | 25.0% |
| ! | TGTAAAGAAAGAAAAACCAA+TGG | + | chr3.1:69293549-69293568 | MS.gene75533:CDS | 25.0% |
| ! | TTAAAACAACAATAGACTGA+AGG | - | chr3.1:69291218-69291237 | None:intergenic | 25.0% |
| ! | TTAAAATTGATTGAATCTGC+AGG | + | chr3.1:69293000-69293019 | MS.gene75533:intron | 25.0% |
| ! | TTAATAGGAAAGAACATAAC+TGG | + | chr3.1:69293285-69293304 | MS.gene75533:intron | 25.0% |
| ! | TTGTAGCTTACATATATCAT+TGG | - | chr3.1:69290933-69290952 | None:intergenic | 25.0% |
| ! | TTTCTTCTTGGAAGTTTAAA+TGG | + | chr3.1:69290797-69290816 | MS.gene75533:CDS | 25.0% |
| !! | TCTTTTAGTAGCTATATTAC+TGG | + | chr3.1:69293422-69293441 | MS.gene75533:intron | 25.0% |
| !! | TTTGATGTTCAAACCATTTT+TGG | + | chr3.1:69293525-69293544 | MS.gene75533:CDS | 25.0% |
| !!! | ATGAAAGCCTATTTCTAAAT+TGG | + | chr3.1:69291736-69291755 | MS.gene75533:CDS | 25.0% |
| !!! | CAATTTTAAGATGTCAACAA+TGG | - | chr3.1:69292989-69293008 | None:intergenic | 25.0% |
| !!! | TTGAAATTTGTCTTGTTGTT+TGG | + | chr3.1:69292452-69292471 | MS.gene75533:intron | 25.0% |
| !!! | TTGATGTTCAAACCATTTTT+GGG | + | chr3.1:69293526-69293545 | MS.gene75533:CDS | 25.0% |
| AAAAAATATGGAAACCTGCA+AGG | - | chr3.1:69291459-69291478 | None:intergenic | 30.0% | |
| AAAACCAGCTATAACATTAG+GGG | + | chr3.1:69290615-69290634 | MS.gene75533:CDS | 30.0% | |
| AAAAGCTGATATTACAAAGC+AGG | - | chr3.1:69291484-69291503 | None:intergenic | 30.0% | |
| AAAGCTGATATTACAAAGCA+GGG | - | chr3.1:69291483-69291502 | None:intergenic | 30.0% | |
| AAATTAATATACGCAGCAGA+GGG | - | chr3.1:69291858-69291877 | None:intergenic | 30.0% | |
| AACTTGAATACATAGCTGAT+AGG | - | chr3.1:69293076-69293095 | None:intergenic | 30.0% | |
| AAGCTGGTATATTACAATAC+CGG | - | chr3.1:69292315-69292334 | None:intergenic | 30.0% | |
| AAGTCCTTCAATAACATTCA+GGG | - | chr3.1:69293497-69293516 | None:intergenic | 30.0% | |
| ACAATAATAGATGACATGAG+AGG | - | chr3.1:69291762-69291781 | None:intergenic | 30.0% | |
| ACATGTCGAATATAATAGCT+CGG | + | chr3.1:69291067-69291086 | MS.gene75533:intron | 30.0% | |
| AGAAAACCAGCTATAACATT+AGG | + | chr3.1:69290613-69290632 | MS.gene75533:CDS | 30.0% | |
| AGAGAAGAAAATCAAGCTTT+AGG | + | chr3.1:69290990-69291009 | MS.gene75533:CDS | 30.0% | |
| AGATACGATATAGTAGACAA+AGG | - | chr3.1:69291040-69291059 | None:intergenic | 30.0% | |
| ATCTACTTACTTATCCCAAA+AGG | - | chr3.1:69291303-69291322 | None:intergenic | 30.0% | |
| ATGTCAGCATTCAAAACAAT+AGG | + | chr3.1:69292900-69292919 | MS.gene75533:CDS | 30.0% | |
| CATATACATATATAGTCGCA+TGG | - | chr3.1:69291592-69291611 | None:intergenic | 30.0% | |
| GAAAAATAAAAATATGGCCG+AGG | - | chr3.1:69291559-69291578 | None:intergenic | 30.0% | |
| GAAAACCAGCTATAACATTA+GGG | + | chr3.1:69290614-69290633 | MS.gene75533:CDS | 30.0% | |
| GAGGAAATTAAGATACATAC+CGG | - | chr3.1:69291540-69291559 | None:intergenic | 30.0% | |
| GATATAGTAGACAAAGGTTA+GGG | - | chr3.1:69291034-69291053 | None:intergenic | 30.0% | |
| GGTATGTATCTTAATTTCCT+CGG | + | chr3.1:69291539-69291558 | MS.gene75533:intron | 30.0% | |
| GTAATGAGATAACAGCTAAT+GGG | - | chr3.1:69292766-69292785 | None:intergenic | 30.0% | |
| GTTAGTCAATATAAAGAGAG+AGG | - | chr3.1:69292662-69292681 | None:intergenic | 30.0% | |
| TAAATTAATATACGCAGCAG+AGG | - | chr3.1:69291859-69291878 | None:intergenic | 30.0% | |
| TAGGATTGTAAAAATGTTGC+AGG | + | chr3.1:69290523-69290542 | MS.gene75533:intron | 30.0% | |
| TCATGACATTACTTATCAAG+AGG | + | chr3.1:69291800-69291819 | MS.gene75533:CDS | 30.0% | |
| TCTTTCTTTACACCCAAAAA+TGG | - | chr3.1:69293541-69293560 | None:intergenic | 30.0% | |
| TGGAAGCAATATTTATCACA+AGG | - | chr3.1:69292559-69292578 | None:intergenic | 30.0% | |
| TTGATTAATGCAGATTAGCA+TGG | + | chr3.1:69293168-69293187 | MS.gene75533:intron | 30.0% | |
| ! | AATCCTTTGGAAATAGATGT+GGG | - | chr3.1:69291280-69291299 | None:intergenic | 30.0% |
| ! | ACTAACTGTAGTACTTTTGT+TGG | + | chr3.1:69292676-69292695 | MS.gene75533:intron | 30.0% |
| ! | ATTTCCAAAGGATTCCTTTT+GGG | + | chr3.1:69291286-69291305 | MS.gene75533:CDS | 30.0% |
| ! | CACCATTTTACTCTTTAACT+AGG | + | chr3.1:69291938-69291957 | MS.gene75533:intron | 30.0% |
| ! | TAACTAGGTTTTCTCGTTAT+GGG | + | chr3.1:69291953-69291972 | MS.gene75533:intron | 30.0% |
| ! | TATTTCCAAAGGATTCCTTT+TGG | + | chr3.1:69291285-69291304 | MS.gene75533:CDS | 30.0% |
| ! | TCTTGTTCTAAACTCTTCAA+TGG | + | chr3.1:69293348-69293367 | MS.gene75533:intron | 30.0% |
| ! | TCTTTCTTTTATATGGATCG+CGG | + | chr3.1:69290116-69290135 | MS.gene75533:CDS | 30.0% |
| ! | TTAACTAGGTTTTCTCGTTA+TGG | + | chr3.1:69291952-69291971 | MS.gene75533:intron | 30.0% |
| !! | TCCATTCTGAAGTTTCTTAT+GGG | + | chr3.1:69292575-69292594 | MS.gene75533:CDS | 30.0% |
| !! | TGACTTTTTCTAAACCATTC+AGG | + | chr3.1:69292287-69292306 | MS.gene75533:intron | 30.0% |
| !! | TTATACTTTGTTGTTGTGCT+CGG | + | chr3.1:69291409-69291428 | MS.gene75533:intron | 30.0% |
| !! | TTCCATTCTGAAGTTTCTTA+TGG | + | chr3.1:69292574-69292593 | MS.gene75533:CDS | 30.0% |
| !!! | GGTGAGTTTAACTTTTTTAC+TGG | + | chr3.1:69290284-69290303 | MS.gene75533:intron | 30.0% |
| AACATCTGTTCCAAGTTCTT+TGG | - | chr3.1:69290085-69290104 | None:intergenic | 35.0% | |
| AACTTTGACATCTATACCGT+GGG | + | chr3.1:69290567-69290586 | MS.gene75533:CDS | 35.0% | |
| AAGTATTATGAGAATTGCCC+TGG | + | chr3.1:69290042-69290061 | MS.gene75533:CDS | 35.0% | |
| ACAAAAAAGATATCAGAGGG+AGG | - | chr3.1:69290209-69290228 | None:intergenic | 35.0% | |
| ACAAAGCAGGGCAAAAAATA+TGG | - | chr3.1:69291471-69291490 | None:intergenic | 35.0% | |
| ACCCATAAGAAACTTCAGAA+TGG | - | chr3.1:69292579-69292598 | None:intergenic | 35.0% | |
| ACGTAGGAAACAATTTCAAC+TGG | + | chr3.1:69292699-69292718 | MS.gene75533:intron | 35.0% | |
| ACTCACCATGAAATAAACGA+AGG | - | chr3.1:69290271-69290290 | None:intergenic | 35.0% | |
| ATCAGCATGAGATTTCTTCT+TGG | + | chr3.1:69290785-69290804 | MS.gene75533:CDS | 35.0% | |
| ATTTATCACAAGGTATAGGG+TGG | - | chr3.1:69292549-69292568 | None:intergenic | 35.0% | |
| CAAATCATAAATCACCTTGC+AGG | + | chr3.1:69291442-69291461 | MS.gene75533:intron | 35.0% | |
| CAAGTCCTTCAATAACATTC+AGG | - | chr3.1:69293498-69293517 | None:intergenic | 35.0% | |
| CATAAGCCTGTTAATACAAG+AGG | - | chr3.1:69290956-69290975 | None:intergenic | 35.0% | |
| CGATATAGTAGACAAAGGTT+AGG | - | chr3.1:69291035-69291054 | None:intergenic | 35.0% | |
| CGTAATGAGATAACAGCTAA+TGG | - | chr3.1:69292767-69292786 | None:intergenic | 35.0% | |
| CTACAACCTCTTGTATTAAC+AGG | + | chr3.1:69290947-69290966 | MS.gene75533:intron | 35.0% | |
| CTCACCATGAAATAAACGAA+GGG | - | chr3.1:69290270-69290289 | None:intergenic | 35.0% | |
| CTGAATGTTATTGAAGGACT+TGG | + | chr3.1:69293496-69293515 | MS.gene75533:CDS | 35.0% | |
| CTTTCCCTTCGTTTATTTCA+TGG | + | chr3.1:69290263-69290282 | MS.gene75533:CDS | 35.0% | |
| GAAACACTTCACTTCCATAA+TGG | + | chr3.1:69291633-69291652 | MS.gene75533:CDS | 35.0% | |
| GGTATAATATCTGATCGCTA+TGG | + | chr3.1:69290589-69290608 | MS.gene75533:CDS | 35.0% | |
| GTTTGGCATACACAATATGT+AGG | + | chr3.1:69292469-69292488 | MS.gene75533:intron | 35.0% | |
| TATCGCTCGTGAATCATAAT+TGG | - | chr3.1:69292628-69292647 | None:intergenic | 35.0% | |
| TCTTAGCACAAATCTATGGA+TGG | + | chr3.1:69290760-69290779 | MS.gene75533:CDS | 35.0% | |
| TGAGAGGCCAATTTAGAAAT+AGG | - | chr3.1:69291746-69291765 | None:intergenic | 35.0% | |
| TTATCCCAAAAGGAATCCTT+TGG | - | chr3.1:69291293-69291312 | None:intergenic | 35.0% | |
| TTTCAATATTGCAGAAAGCG+AGG | + | chr3.1:69290408-69290427 | MS.gene75533:CDS | 35.0% | |
| TTTCTAAACCATTCAGGTAC+CGG | + | chr3.1:69292293-69292312 | MS.gene75533:intron | 35.0% | |
| TTTGCCCTGAATGTTATTGA+AGG | + | chr3.1:69293490-69293509 | MS.gene75533:CDS | 35.0% | |
| ! | GAATCCTTTGGAAATAGATG+TGG | - | chr3.1:69291281-69291300 | None:intergenic | 35.0% |
| ! | GCAAACAACATTGTTGTTAC+AGG | - | chr3.1:69290706-69290725 | None:intergenic | 35.0% |
| ! | TGTTCTAAACTCTTCAATGG+TGG | + | chr3.1:69293351-69293370 | MS.gene75533:intron | 35.0% |
| !! | ACATGTTGATTTGGTATGAC+AGG | + | chr3.1:69292833-69292852 | MS.gene75533:intron | 35.0% |
| !! | CACAGACTTTTTGCATTGAT+GGG | - | chr3.1:69292346-69292365 | None:intergenic | 35.0% |
| !! | GTCATTTTCAACACGTTGTT+TGG | + | chr3.1:69290737-69290756 | MS.gene75533:CDS | 35.0% |
| !! | TTGGTCTTAGCACAAATCTA+TGG | + | chr3.1:69290756-69290775 | MS.gene75533:CDS | 35.0% |
| AACTCAAGAGTTGCAGTATG+AGG | - | chr3.1:69290326-69290345 | None:intergenic | 40.0% | |
| AATTGCCTGCATTTGGTTAC+CGG | + | chr3.1:69291518-69291537 | MS.gene75533:CDS | 40.0% | |
| ACAGGAACAACATCAAAGAG+GGG | + | chr3.1:69292851-69292870 | MS.gene75533:intron | 40.0% | |
| ACATGAAGTCATGCTTTCCT+TGG | + | chr3.1:69290654-69290673 | MS.gene75533:intron | 40.0% | |
| ACTCAAGAGTTGCAGTATGA+GGG | - | chr3.1:69290325-69290344 | None:intergenic | 40.0% | |
| ACTTTGACATCTATACCGTG+GGG | + | chr3.1:69290568-69290587 | MS.gene75533:CDS | 40.0% | |
| AGTATATAGCTTGAAGGCCA+AGG | - | chr3.1:69290674-69290693 | None:intergenic | 40.0% | |
| ATAGCCCCTAATGTTATAGC+TGG | - | chr3.1:69290622-69290641 | None:intergenic | 40.0% | |
| ATAGTAGACAAAGGTTAGGG+AGG | - | chr3.1:69291031-69291050 | None:intergenic | 40.0% | |
| ATAGTCGCATGGTATGAAGA+GGG | - | chr3.1:69291581-69291600 | None:intergenic | 40.0% | |
| ATGAGATAACAGCTAATGGG+AGG | - | chr3.1:69292763-69292782 | None:intergenic | 40.0% | |
| ATGATTCACGAGCGATATTG+AGG | + | chr3.1:69292631-69292650 | MS.gene75533:intron | 40.0% | |
| ATTAAGCTGAGCATCATACC+TGG | - | chr3.1:69293224-69293243 | None:intergenic | 40.0% | |
| CCATCAATGCAAAAAGTCTG+TGG | + | chr3.1:69292344-69292363 | MS.gene75533:CDS | 40.0% | |
| CGATCAGATATTATACCCCA+CGG | - | chr3.1:69290586-69290605 | None:intergenic | 40.0% | |
| CTAAACTCTTCAATGGTGGT+AGG | + | chr3.1:69293355-69293374 | MS.gene75533:intron | 40.0% | |
| CTTGATCAACCTTACAACCA+GGG | - | chr3.1:69290062-69290081 | None:intergenic | 40.0% | |
| GAACTTTGACATCTATACCG+TGG | + | chr3.1:69290566-69290585 | MS.gene75533:CDS | 40.0% | |
| GAAGATATAAGCGCTTATGC+AGG | + | chr3.1:69290430-69290449 | MS.gene75533:CDS | 40.0% | |
| GACAGGAACAACATCAAAGA+GGG | + | chr3.1:69292850-69292869 | MS.gene75533:intron | 40.0% | |
| GATTAGCATGGTCACAAAAG+CGG | + | chr3.1:69293180-69293199 | MS.gene75533:intron | 40.0% | |
| GGAACAGGAAAATCATGAAG+TGG | - | chr3.1:69291833-69291852 | None:intergenic | 40.0% | |
| GGAAGTTTAAATGGTCTGCT+GGG | + | chr3.1:69290806-69290825 | MS.gene75533:CDS | 40.0% | |
| GGCAATGTTCTTGCAATATC+AGG | + | chr3.1:69292026-69292045 | MS.gene75533:CDS | 40.0% | |
| GTACCCACATCTATTTCCAA+AGG | + | chr3.1:69291274-69291293 | MS.gene75533:CDS | 40.0% | |
| GTATCACAAGCACAAACATG+TGG | - | chr3.1:69293109-69293128 | None:intergenic | 40.0% | |
| GTTGATCAAGCCAAAGAACT+TGG | + | chr3.1:69290072-69290091 | MS.gene75533:CDS | 40.0% | |
| TATAGTCGCATGGTATGAAG+AGG | - | chr3.1:69291582-69291601 | None:intergenic | 40.0% | |
| TATCGTCGTGCTCTATAAAC+TGG | + | chr3.1:69291889-69291908 | MS.gene75533:intron | 40.0% | |
| TCCAGCATTAGGAGGTTATT+TGG | + | chr3.1:69291141-69291160 | MS.gene75533:CDS | 40.0% | |
| TGACAGGAACAACATCAAAG+AGG | + | chr3.1:69292849-69292868 | MS.gene75533:intron | 40.0% | |
| TGAGATAACAGCTAATGGGA+GGG | - | chr3.1:69292762-69292781 | None:intergenic | 40.0% | |
| TGATTCACGAGCGATATTGA+GGG | + | chr3.1:69292632-69292651 | MS.gene75533:intron | 40.0% | |
| TGGAAGTTTAAATGGTCTGC+TGG | + | chr3.1:69290805-69290824 | MS.gene75533:CDS | 40.0% | |
| TTAAATGCTTCTTTCCTCCC+AGG | + | chr3.1:69293203-69293222 | MS.gene75533:CDS | 40.0% | |
| TTAAGCTGAGCATCATACCT+GGG | - | chr3.1:69293223-69293242 | None:intergenic | 40.0% | |
| TTACAATACCGGTACCTGAA+TGG | - | chr3.1:69292304-69292323 | None:intergenic | 40.0% | |
| TTAGTCATTGGTCCAGCATT+AGG | + | chr3.1:69291130-69291149 | MS.gene75533:CDS | 40.0% | |
| TTCAAAACAATAGGTCCTGC+TGG | + | chr3.1:69292909-69292928 | MS.gene75533:CDS | 40.0% | |
| ! | ATTAGGAGGTTATTTGGCTC+AGG | + | chr3.1:69291147-69291166 | MS.gene75533:CDS | 40.0% |
| ! | CCACAGACTTTTTGCATTGA+TGG | - | chr3.1:69292347-69292366 | None:intergenic | 40.0% |
| ! | GTAGTACTTTTGTTGGACGT+AGG | + | chr3.1:69292683-69292702 | MS.gene75533:intron | 40.0% |
| ! | TTGATGGGTACAAAGAAAGC+TGG | - | chr3.1:69292331-69292350 | None:intergenic | 40.0% |
| !! | ATATGGATCGCGGTTTTATG+TGG | + | chr3.1:69290126-69290145 | MS.gene75533:CDS | 40.0% |
| !! | TGTGATCTGATTTCAGGTTG+TGG | + | chr3.1:69291090-69291109 | MS.gene75533:intron | 40.0% |
| AAAACAATAGGTCCTGCTGG+AGG | + | chr3.1:69292912-69292931 | MS.gene75533:CDS | 45.0% | |
| AAACTGGCGTTTCATCGAAG+TGG | + | chr3.1:69291905-69291924 | MS.gene75533:intron | 45.0% | |
| AAGGGGTAACTTTGCAAGAG+GGG | - | chr3.1:69292506-69292525 | None:intergenic | 45.0% | |
| AATGTGGAAGCTGCAGAAGT+TGG | + | chr3.1:69291675-69291694 | MS.gene75533:CDS | 45.0% | |
| ACATACCGGTAACCAAATGC+AGG | - | chr3.1:69291526-69291545 | None:intergenic | 45.0% | |
| AGCGCTTATGCAGGTTATGT+AGG | + | chr3.1:69290439-69290458 | MS.gene75533:CDS | 45.0% | |
| CAATGAGTCCACTGACAATG+TGG | + | chr3.1:69291659-69291678 | MS.gene75533:CDS | 45.0% | |
| CAGACAGTGATGTCATGAAG+GGG | - | chr3.1:69292523-69292542 | None:intergenic | 45.0% | |
| CAGTAGCAATTGCCTGCATT+TGG | + | chr3.1:69291511-69291530 | MS.gene75533:CDS | 45.0% | |
| CCAGACAGTGATGTCATGAA+GGG | - | chr3.1:69292524-69292543 | None:intergenic | 45.0% | |
| CCTTCTGCAAAATAGAGCAG+TGG | + | chr3.1:69292728-69292747 | MS.gene75533:CDS | 45.0% | |
| GAAGGGGTAACTTTGCAAGA+GGG | - | chr3.1:69292507-69292526 | None:intergenic | 45.0% | |
| GCAGGATCTTCATACATGCT+TGG | + | chr3.1:69290541-69290560 | MS.gene75533:intron | 45.0% | |
| GCCAAATAACCTCCTAATGC+TGG | - | chr3.1:69291145-69291164 | None:intergenic | 45.0% | |
| GCTTGATCAACCTTACAACC+AGG | - | chr3.1:69290063-69290082 | None:intergenic | 45.0% | |
| GTAACTTTGCAAGAGGGGTA+TGG | - | chr3.1:69292501-69292520 | None:intergenic | 45.0% | |
| TAATATACGCAGCAGAGGGT+CGG | - | chr3.1:69291854-69291873 | None:intergenic | 45.0% | |
| TGAAGGGGTAACTTTGCAAG+AGG | - | chr3.1:69292508-69292527 | None:intergenic | 45.0% | |
| TGAGAATTGCCCTGGTTGTA+AGG | + | chr3.1:69290050-69290069 | MS.gene75533:CDS | 45.0% | |
| TGGACTCATTGCTGCCATTA+TGG | - | chr3.1:69291650-69291669 | None:intergenic | 45.0% | |
| TGGGGAGTAGGTTTAGTCAT+TGG | + | chr3.1:69291118-69291137 | MS.gene75533:CDS | 45.0% | |
| TTAACCTTGCTCGCATTGCT+GGG | + | chr3.1:69292372-69292391 | MS.gene75533:CDS | 45.0% | |
| ! | CCACTGCTCTATTTTGCAGA+AGG | - | chr3.1:69292731-69292750 | None:intergenic | 45.0% |
| !! | ATTTCAGGTTGTGGCAGCTT+GGG | + | chr3.1:69291099-69291118 | MS.gene75533:intron | 45.0% |
| AAGGGAAAGAGCGATGCAAG+GGG | - | chr3.1:69290252-69290271 | None:intergenic | 50.0% | |
| AGATGTGGGTACTTCAGTGC+TGG | - | chr3.1:69291266-69291285 | None:intergenic | 50.0% | |
| AGTTCAAACCGCCCAACCTT+CGG | - | chr3.1:69291989-69292008 | None:intergenic | 50.0% | |
| CATCAAAGAGGGGCAGCTAA+TGG | + | chr3.1:69292861-69292880 | MS.gene75533:CDS | 50.0% | |
| CCCTTCATGACATCACTGTC+TGG | + | chr3.1:69292521-69292540 | MS.gene75533:CDS | 50.0% | |
| GAAGGGAAAGAGCGATGCAA+GGG | - | chr3.1:69290253-69290272 | None:intergenic | 50.0% | |
| GCAATGCGAGCAAGGTTAAC+AGG | - | chr3.1:69292371-69292390 | None:intergenic | 50.0% | |
| GCCAGACAGTGATGTCATGA+AGG | - | chr3.1:69292525-69292544 | None:intergenic | 50.0% | |
| GTCATTGGTCCAGCATTAGG+AGG | + | chr3.1:69291133-69291152 | MS.gene75533:CDS | 50.0% | |
| GTTAACCTTGCTCGCATTGC+TGG | + | chr3.1:69292371-69292390 | MS.gene75533:CDS | 50.0% | |
| TAACCTTGCTCGCATTGCTG+GGG | + | chr3.1:69292373-69292392 | MS.gene75533:CDS | 50.0% | |
| TGCAGCTTCCACATTGTCAG+TGG | - | chr3.1:69291670-69291689 | None:intergenic | 50.0% | |
| TGGTCTGCTGGGACCTATAA+AGG | + | chr3.1:69290817-69290836 | MS.gene75533:CDS | 50.0% | |
| ! | TAGGGAGGCATACTGTTGAG+AGG | - | chr3.1:69291016-69291035 | None:intergenic | 50.0% |
| !! | GATTTCAGGTTGTGGCAGCT+TGG | + | chr3.1:69291098-69291117 | MS.gene75533:intron | 50.0% |
| !! | GCTCGGTGTGATCTGATTTC+AGG | + | chr3.1:69291084-69291103 | MS.gene75533:intron | 50.0% |
| !! | TTTCAGGTTGTGGCAGCTTG+GGG | + | chr3.1:69291100-69291119 | MS.gene75533:intron | 50.0% |
| AAAGAGCGATGCAAGGGGCA+AGG | - | chr3.1:69290247-69290266 | None:intergenic | 55.0% | |
| ACAATAGGTCCTGCTGGAGG+CGG | + | chr3.1:69292915-69292934 | MS.gene75533:CDS | 55.0% | |
| AGCTGAGCATCATACCTGGG+AGG | - | chr3.1:69293220-69293239 | None:intergenic | 55.0% | |
| CGAAGGGAAAGAGCGATGCA+AGG | - | chr3.1:69290254-69290273 | None:intergenic | 55.0% | |
| GTGTGTGCGTGTATCACTGC+AGG | + | chr3.1:69291611-69291630 | MS.gene75533:intron | 55.0% | |
| GTTCAAACCGCCCAACCTTC+GGG | - | chr3.1:69291988-69292007 | None:intergenic | 55.0% | |
| TAACCCCAGCAATGCGAGCA+AGG | - | chr3.1:69292379-69292398 | None:intergenic | 55.0% | |
| TTCAAACCGCCCAACCTTCG+GGG | - | chr3.1:69291987-69292006 | None:intergenic | 55.0% | |
| GCTGTCAGTCCCCGAAGGTT+GGG | + | chr3.1:69291975-69291994 | MS.gene75533:CDS | 60.0% | |
| GTTGTGGCAGCTTGGGGAGT+AGG | + | chr3.1:69291106-69291125 | MS.gene75533:CDS | 60.0% | |
| ! | TATGGGCTGTCAGTCCCCGA+AGG | + | chr3.1:69291970-69291989 | MS.gene75533:CDS | 60.0% |
| !! | GGGTACTTCAGTGCTGGCTG+TGG | - | chr3.1:69291260-69291279 | None:intergenic | 60.0% |
| ACGCAGCAGAGGGTCGGAAC+AGG | - | chr3.1:69291848-69291867 | None:intergenic | 65.0% | |
| CACAATGCACCGCCTCCAGC+AGG | - | chr3.1:69292927-69292946 | None:intergenic | 65.0% | |
| GGCTGTCAGTCCCCGAAGGT+TGG | + | chr3.1:69291974-69291993 | MS.gene75533:CDS | 65.0% | |
| GTCAGTCCCCGAAGGTTGGG+CGG | + | chr3.1:69291978-69291997 | MS.gene75533:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 69290003 | 69293585 | 69290003 | ID=MS.gene75533 |
| chr3.1 | mRNA | 69290003 | 69293585 | 69290003 | ID=MS.gene75533.t1;Parent=MS.gene75533 |
| chr3.1 | exon | 69290003 | 69290150 | 69290003 | ID=MS.gene75533.t1.exon1;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69290003 | 69290150 | 69290003 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69290244 | 69290284 | 69290244 | ID=MS.gene75533.t1.exon2;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69290244 | 69290284 | 69290244 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69290400 | 69290460 | 69290400 | ID=MS.gene75533.t1.exon3;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69290400 | 69290460 | 69290400 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69290545 | 69290647 | 69290545 | ID=MS.gene75533.t1.exon4;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69290545 | 69290647 | 69290545 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69290736 | 69290838 | 69290736 | ID=MS.gene75533.t1.exon5;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69290736 | 69290838 | 69290736 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69290969 | 69291022 | 69290969 | ID=MS.gene75533.t1.exon6;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69290969 | 69291022 | 69290969 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69291106 | 69291168 | 69291106 | ID=MS.gene75533.t1.exon7;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69291106 | 69291168 | 69291106 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69291263 | 69291312 | 69291263 | ID=MS.gene75533.t1.exon8;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69291263 | 69291312 | 69291263 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69291464 | 69291539 | 69291464 | ID=MS.gene75533.t1.exon9;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69291464 | 69291539 | 69291464 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69291633 | 69291821 | 69291633 | ID=MS.gene75533.t1.exon10;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69291633 | 69291821 | 69291633 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69291960 | 69292047 | 69291960 | ID=MS.gene75533.t1.exon11;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69291960 | 69292047 | 69291960 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69292309 | 69292394 | 69292309 | ID=MS.gene75533.t1.exon12;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69292309 | 69292394 | 69292309 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69292491 | 69292598 | 69292491 | ID=MS.gene75533.t1.exon13;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69292491 | 69292598 | 69292491 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69292705 | 69292749 | 69292705 | ID=MS.gene75533.t1.exon14;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69292705 | 69292749 | 69292705 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69292855 | 69292943 | 69292855 | ID=MS.gene75533.t1.exon15;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69292855 | 69292943 | 69292855 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69293181 | 69293224 | 69293181 | ID=MS.gene75533.t1.exon16;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69293181 | 69293224 | 69293181 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| chr3.1 | exon | 69293473 | 69293585 | 69293473 | ID=MS.gene75533.t1.exon17;Parent=MS.gene75533.t1 |
| chr3.1 | CDS | 69293473 | 69293585 | 69293473 | ID=cds.MS.gene75533.t1;Parent=MS.gene75533.t1 |
| Gene Sequence |
| Protein sequence |
