Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039608.t1 | XP_003598458.2 | 97.9 | 566 | 12 | 0 | 98 | 663 | 59 | 624 | 0.00E+00 | 1116.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039608.t1 | Q0WVD6 | 56.2 | 578 | 197 | 10 | 99 | 662 | 66 | 601 | 3.1e-167 | 590.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039608.t1 | G7IYP7 | 97.9 | 566 | 12 | 0 | 98 | 663 | 59 | 624 | 0.0e+00 | 1116.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene62683 | MS.gene039608 | PPI |
| MS.gene026524 | MS.gene039608 | PPI |
| MS.gene029093 | MS.gene039608 | PPI |
| MS.gene98978 | MS.gene039608 | PPI |
| MS.gene020523 | MS.gene039608 | PPI |
| MS.gene015652 | MS.gene039608 | PPI |
| MS.gene020525 | MS.gene039608 | PPI |
| MS.gene90825 | MS.gene039608 | PPI |
| MS.gene25178 | MS.gene039608 | PPI |
| MS.gene83062 | MS.gene039608 | PPI |
| MS.gene97346 | MS.gene039608 | PPI |
| MS.gene052664 | MS.gene039608 | PPI |
| MS.gene066439 | MS.gene039608 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039608.t1 | MTR_3g013960 | 97.707 | 567 | 13 | 0 | 97 | 663 | 58 | 624 | 0.0 | 1134 |
| MS.gene039608.t1 | MTR_6g091770 | 38.462 | 312 | 154 | 9 | 295 | 603 | 65 | 341 | 2.01e-58 | 202 |
| MS.gene039608.t1 | MTR_3g013980 | 95.506 | 89 | 4 | 0 | 1 | 89 | 1 | 89 | 2.52e-42 | 149 |
| MS.gene039608.t1 | MTR_2g054880 | 33.728 | 338 | 166 | 13 | 294 | 604 | 25 | 331 | 2.61e-40 | 152 |
| MS.gene039608.t1 | MTR_1g113940 | 32.468 | 308 | 159 | 9 | 292 | 579 | 9 | 287 | 5.96e-40 | 150 |
| MS.gene039608.t1 | MTR_4g119900 | 31.073 | 354 | 194 | 12 | 267 | 604 | 109 | 428 | 2.90e-33 | 134 |
| MS.gene039608.t1 | MTR_4g119900 | 31.073 | 354 | 194 | 12 | 267 | 604 | 109 | 428 | 3.40e-33 | 134 |
| MS.gene039608.t1 | MTR_2g436780 | 31.761 | 318 | 178 | 10 | 295 | 604 | 144 | 430 | 9.50e-33 | 133 |
| MS.gene039608.t1 | MTR_2g436780 | 31.761 | 318 | 178 | 10 | 295 | 604 | 144 | 430 | 1.08e-32 | 133 |
| MS.gene039608.t1 | MTR_8g040080 | 56.962 | 79 | 32 | 1 | 9 | 85 | 1 | 79 | 5.43e-18 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039608.t1 | AT3G12270 | 56.131 | 579 | 196 | 10 | 99 | 662 | 66 | 601 | 0.0 | 616 |
| MS.gene039608.t1 | AT2G19670 | 38.728 | 346 | 173 | 10 | 295 | 637 | 48 | 357 | 3.77e-64 | 216 |
| MS.gene039608.t1 | AT4G29510 | 40.385 | 312 | 148 | 9 | 295 | 603 | 72 | 348 | 1.01e-62 | 213 |
| MS.gene039608.t1 | AT3G20020 | 39.412 | 340 | 144 | 7 | 294 | 599 | 82 | 393 | 1.07e-62 | 215 |
| MS.gene039608.t1 | AT3G20020 | 39.412 | 340 | 144 | 7 | 294 | 599 | 82 | 393 | 1.71e-62 | 214 |
| MS.gene039608.t1 | AT3G20020 | 36.765 | 340 | 131 | 7 | 294 | 599 | 82 | 371 | 1.24e-54 | 192 |
| MS.gene039608.t1 | AT1G04870 | 31.122 | 392 | 193 | 14 | 295 | 655 | 35 | 380 | 5.46e-42 | 157 |
| MS.gene039608.t1 | AT3G06930 | 32.390 | 318 | 176 | 10 | 295 | 604 | 148 | 434 | 8.17e-35 | 139 |
| MS.gene039608.t1 | AT3G06930 | 32.390 | 318 | 176 | 10 | 295 | 604 | 148 | 434 | 8.23e-35 | 139 |
| MS.gene039608.t1 | AT5G49020 | 31.464 | 321 | 175 | 10 | 295 | 604 | 151 | 437 | 1.13e-33 | 136 |
| MS.gene039608.t1 | AT5G49020 | 31.464 | 321 | 175 | 10 | 295 | 604 | 149 | 435 | 1.26e-33 | 135 |
| MS.gene039608.t1 | AT1G04870 | 27.273 | 297 | 153 | 12 | 390 | 655 | 13 | 277 | 6.38e-20 | 90.9 |
Find 142 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAATCATCTTGCATAAA+AGG | 0.183353 | 3.1:+9436317 | None:intergenic |
| CCACTTCTACGACTCCTTTC+TGG | 0.198892 | 3.1:+9434822 | None:intergenic |
| AAAGTTAATGAAAGTTATTT+TGG | 0.207730 | 3.1:-9435996 | MS.gene039608:CDS |
| TTTCACCGCAACAGCTTCTT+TGG | 0.219398 | 3.1:-9433369 | MS.gene039608:CDS |
| CTATAGTTTGTTGCAGGATT+TGG | 0.222527 | 3.1:-9433768 | MS.gene039608:intron |
| CACAGACAATCTTAACTTTC+CGG | 0.225094 | 3.1:-9433190 | MS.gene039608:CDS |
| GAACCCATTGCCATTGGATT+TGG | 0.227276 | 3.1:-9433167 | MS.gene039608:CDS |
| CCTTCAGTGCCAATTGTTTC+CGG | 0.228262 | 3.1:+9433125 | None:intergenic |
| AACCCATTGCCATTGGATTT+GGG | 0.279768 | 3.1:-9433166 | MS.gene039608:CDS |
| TCACAAACGTTCTCCCAAAA+TGG | 0.294956 | 3.1:+9433726 | None:intergenic |
| GAGGTACAAGTCTTCCATTT+TGG | 0.302479 | 3.1:-9433740 | MS.gene039608:CDS |
| TACCAGTTCCACTATTCTTC+AGG | 0.304524 | 3.1:-9433616 | MS.gene039608:intron |
| TTTGGGTCTTACAGTTCATT+TGG | 0.315617 | 3.1:-9435978 | MS.gene039608:CDS |
| AAGAATCCCTCTCTGCTAAA+TGG | 0.326618 | 3.1:-9435764 | MS.gene039608:CDS |
| TTTCTTCTATAGTTTGTTGC+AGG | 0.327172 | 3.1:-9433774 | MS.gene039608:intron |
| CAGCTCAAGCAGGGGCTTCA+AGG | 0.336862 | 3.1:-9435042 | MS.gene039608:CDS |
| GCACTAGTCTTCACTTTCAT+AGG | 0.354513 | 3.1:+9441831 | None:intergenic |
| ATCCAATGGCAATGGGTTCC+CGG | 0.357682 | 3.1:+9433171 | None:intergenic |
| ATCACATTGCAACACATATT+AGG | 0.362480 | 3.1:-9436019 | MS.gene039608:CDS |
| GCTAAATGGTGCTGTGGTTA+TGG | 0.363146 | 3.1:-9435750 | MS.gene039608:CDS |
| TGACATCAACTATAGGATAT+CGG | 0.365527 | 3.1:+9433658 | None:intergenic |
| GTGATTCTGCAAATCATGTT+TGG | 0.365703 | 3.1:+9436403 | None:intergenic |
| ACAGACAATCTTAACTTTCC+GGG | 0.373070 | 3.1:-9433189 | MS.gene039608:CDS |
| AAAACATGTTGCTGGTGTTA+TGG | 0.377230 | 3.1:-9433311 | MS.gene039608:CDS |
| GATTTGAAAGACGCAATTTA+CGG | 0.384974 | 3.1:-9436221 | MS.gene039608:CDS |
| ATGGACGTCGGCTGTGGAAC+TGG | 0.403171 | 3.1:-9435731 | MS.gene039608:CDS |
| GTTGTCCTATGGTTTGATAC+TGG | 0.404254 | 3.1:-9433287 | MS.gene039608:CDS |
| CGTGACCGGTATTTGAAGCC+TGG | 0.407812 | 3.1:-9434671 | MS.gene039608:CDS |
| TCAGATAAGGAACTTGTTAA+CGG | 0.428239 | 3.1:-9436116 | MS.gene039608:CDS |
| ATCCACTTCATGGTGCTTCA+TGG | 0.428328 | 3.1:+9433391 | None:intergenic |
| CATGATGTAACTGACTTCAA+TGG | 0.431414 | 3.1:-9436377 | MS.gene039608:CDS |
| AACTGGTAACTAAATCTTGA+TGG | 0.438792 | 3.1:+9433631 | None:intergenic |
| TTGGATTTGGGGAAGAAAAC+GGG | 0.442610 | 3.1:-9433154 | MS.gene039608:CDS |
| AGATGCCACTGCTGCCATCT+TGG | 0.443421 | 3.1:+9434997 | None:intergenic |
| CAATGGGATTACGCCTTTGT+GGG | 0.445795 | 3.1:-9436360 | MS.gene039608:CDS |
| GATGGCAGCAGTGGCATCTC+AGG | 0.448831 | 3.1:-9434993 | MS.gene039608:intron |
| ATTGGATTTGGGGAAGAAAA+CGG | 0.449649 | 3.1:-9433155 | MS.gene039608:CDS |
| GTGACCGGTATTTGAAGCCT+GGG | 0.451630 | 3.1:-9434670 | MS.gene039608:CDS |
| AATGAAATTAATGAGCTTGA+AGG | 0.452508 | 3.1:+9438939 | None:intergenic |
| TTCCGGGAACCCATTGCCAT+TGG | 0.454934 | 3.1:-9433173 | MS.gene039608:CDS |
| AGTTGCTGTGTCGGGAAGAA+TGG | 0.455428 | 3.1:+9434643 | None:intergenic |
| TCAATGGGATTACGCCTTTG+TGG | 0.460779 | 3.1:-9436361 | MS.gene039608:CDS |
| CAAGTGCGTCTCCGACCATC+AGG | 0.460891 | 3.1:+9433008 | None:intergenic |
| CAATGTTGCTGATATGTTTG+TGG | 0.462429 | 3.1:-9441763 | MS.gene039608:CDS |
| GGGACAAAACCGGAAACAAT+TGG | 0.463028 | 3.1:-9433134 | MS.gene039608:CDS |
| AACCTGAAGAATAGTGGAAC+TGG | 0.464724 | 3.1:+9433614 | None:intergenic |
| CGCAAATCAATCTTCACAGC+AGG | 0.465652 | 3.1:+9433098 | None:intergenic |
| TGGTCTATGACATCAACTAT+AGG | 0.466424 | 3.1:+9433651 | None:intergenic |
| GACATCAACTATAGGATATC+GGG | 0.467340 | 3.1:+9433659 | None:intergenic |
| GGAAGAAAACGGGACAAAAC+CGG | 0.471450 | 3.1:-9433144 | MS.gene039608:CDS |
| CAGATAAGGAACTTGTTAAC+GGG | 0.472965 | 3.1:-9436115 | MS.gene039608:CDS |
| TTTGTTGCAGGATTTGGAAA+AGG | 0.474514 | 3.1:-9433762 | MS.gene039608:CDS |
| AGGCTAGAATGGATGCTTAC+GGG | 0.475663 | 3.1:-9435799 | MS.gene039608:CDS |
| AAAATTCTAAAACATGTTGC+TGG | 0.477619 | 3.1:-9433319 | MS.gene039608:CDS |
| TCGAGAGATGTTAAGTGATA+AGG | 0.479049 | 3.1:-9435949 | MS.gene039608:intron |
| TCCCCAAATCCAATGGCAAT+GGG | 0.479745 | 3.1:+9433164 | None:intergenic |
| TTGCGGTGAAATCCACTTCA+TGG | 0.482299 | 3.1:+9433381 | None:intergenic |
| AAAAGCGAAACTAGAGTCAA+TGG | 0.482482 | 3.1:-9434848 | MS.gene039608:CDS |
| CTGATGGTCGGAGACGCACT+TGG | 0.483332 | 3.1:-9433007 | MS.gene039608:CDS |
| ATTGATAAGAATCGAGAAGA+AGG | 0.483613 | 3.1:-9436065 | MS.gene039608:CDS |
| TAACAGCGTGAAAATCGAAA+TGG | 0.484122 | 3.1:+9438992 | None:intergenic |
| TTCCCCAAATCCAATGGCAA+TGG | 0.484968 | 3.1:+9433163 | None:intergenic |
| TTGATGTATTGTTAAGTGAA+TGG | 0.485877 | 3.1:-9434745 | MS.gene039608:CDS |
| AACTTTGGTGAATTTGAAGA+AGG | 0.486916 | 3.1:-9436287 | MS.gene039608:CDS |
| TTGCTATATGAATCCATGCT+TGG | 0.487442 | 3.1:-9434710 | MS.gene039608:CDS |
| CTCACAATAGTTGCTGTGTC+GGG | 0.491195 | 3.1:+9434635 | None:intergenic |
| ACTTACACCAGCAGCTTCCA+TGG | 0.492375 | 3.1:+9433031 | None:intergenic |
| TGTTAGAAATTCTCTCAACT+TGG | 0.492743 | 3.1:-9438974 | MS.gene039608:CDS |
| CTTGCCTAGTTCCTCAGATA+AGG | 0.496629 | 3.1:-9436129 | MS.gene039608:CDS |
| GATTCATTGCTGTACAACTT+TGG | 0.498902 | 3.1:-9436302 | MS.gene039608:CDS |
| GCTGTGGAACTGGCATCCTC+AGG | 0.503024 | 3.1:-9435721 | MS.gene039608:intron |
| GAGAGCAGATGTTGGAGTTG+TGG | 0.503025 | 3.1:-9436440 | MS.gene039608:CDS |
| CGTAGAAGTGGTTCATGGTA+TGG | 0.506163 | 3.1:-9434810 | MS.gene039608:CDS |
| CACAAACATATCAGCAACAT+TGG | 0.506499 | 3.1:+9441764 | None:intergenic |
| GGTGTTATGGAGTTGTCCTA+TGG | 0.510283 | 3.1:-9433298 | MS.gene039608:CDS |
| TAGGCTAGAATGGATGCTTA+CGG | 0.510366 | 3.1:-9435800 | MS.gene039608:CDS |
| GATTTACAACTAGATTCTGC+CGG | 0.516034 | 3.1:-9433265 | MS.gene039608:CDS |
| GGGGATGTTGACAGCACAGC+TGG | 0.518510 | 3.1:+9433236 | None:intergenic |
| GTGGTTATGGACGTCGGCTG+TGG | 0.518806 | 3.1:-9435737 | MS.gene039608:CDS |
| AGCTCAAGCAGGGGCTTCAA+GGG | 0.522466 | 3.1:-9435041 | MS.gene039608:CDS |
| CATTAATTTCATTCGCTCCA+AGG | 0.525000 | 3.1:-9438929 | MS.gene039608:intron |
| GGCACAAACCTGAAGAATAG+TGG | 0.525375 | 3.1:+9433608 | None:intergenic |
| GGAGTCGTAGAAGTGGTTCA+TGG | 0.526179 | 3.1:-9434815 | MS.gene039608:CDS |
| CCGGAAACAATTGGCACTGA+AGG | 0.532793 | 3.1:-9433125 | MS.gene039608:CDS |
| ATGATGTAACTGACTTCAAT+GGG | 0.536664 | 3.1:-9436376 | MS.gene039608:CDS |
| TGTATTGTTAAGTGAATGGA+TGG | 0.541095 | 3.1:-9434741 | MS.gene039608:CDS |
| GGTGAAGAGAAGCACAATGT+TGG | 0.542150 | 3.1:+9439013 | None:intergenic |
| ATCCTACCAGACCTTTGACT+TGG | 0.543164 | 3.1:-9433417 | MS.gene039608:intron |
| GACATTTCCATGGAAGCTGC+TGG | 0.547329 | 3.1:-9433038 | MS.gene039608:CDS |
| TCGCAGCATTGACATTTCCA+TGG | 0.548287 | 3.1:-9433048 | MS.gene039608:CDS |
| ACAGCACAGCTGGTGTATCC+CGG | 0.549263 | 3.1:+9433246 | None:intergenic |
| AGTGATAATAATTCTAGTGA+AGG | 0.551796 | 3.1:-9441672 | MS.gene039608:intron |
| ACCCATTGCCATTGGATTTG+GGG | 0.554541 | 3.1:-9433165 | MS.gene039608:CDS |
| ACTCACAATAGTTGCTGTGT+CGG | 0.555220 | 3.1:+9434634 | None:intergenic |
| CAGTGCTTTATGCACGTGAC+CGG | 0.559254 | 3.1:-9434685 | MS.gene039608:CDS |
| TGACATGTCTTGCATTGGGG+AGG | 0.560880 | 3.1:-9433700 | MS.gene039608:CDS |
| CTCTCTGCTAAATGGTGCTG+TGG | 0.560984 | 3.1:-9435756 | MS.gene039608:CDS |
| AGTTGAGGCTAGTGCCAAGA+TGG | 0.562069 | 3.1:-9435011 | MS.gene039608:CDS |
| AGAGTCAATGGCAACCAGAA+AGG | 0.562757 | 3.1:-9434836 | MS.gene039608:CDS |
| ATGTTGGAACAAGGAAGTGC+AGG | 0.564814 | 3.1:+9439029 | None:intergenic |
| TAAATCCAGTATCAAACCAT+AGG | 0.566573 | 3.1:+9433282 | None:intergenic |
| TTCAAGGGTCATTGCAGTTG+AGG | 0.568402 | 3.1:-9435026 | MS.gene039608:CDS |
| TGTTCACAACCATGTGATGA+AGG | 0.570504 | 3.1:-9441910 | MS.gene039608:CDS |
| ATTTACAACTAGATTCTGCC+GGG | 0.570970 | 3.1:-9433264 | MS.gene039608:CDS |
| AGTTCCTTATCTGAGGAACT+AGG | 0.571202 | 3.1:+9436125 | None:intergenic |
| GCTGCTGGTGTAAGTCCTGA+TGG | 0.574483 | 3.1:-9433023 | MS.gene039608:CDS |
| AGCACTTGTACAAGAGCTCA+CGG | 0.582251 | 3.1:-9441796 | MS.gene039608:CDS |
| GTTAACAAGTTCCTTATCTG+AGG | 0.586317 | 3.1:+9436118 | None:intergenic |
| CCTCACAAGATCTTCATCCA+TGG | 0.589189 | 3.1:+9436244 | None:intergenic |
| AGATGAAGAAACTTCAACCA+TGG | 0.589472 | 3.1:-9436261 | MS.gene039608:CDS |
| TAGTGCCAAGATGGCAGCAG+TGG | 0.596391 | 3.1:-9435002 | MS.gene039608:CDS |
| ACAGCACCATTTAGCAGAGA+GGG | 0.596424 | 3.1:+9435758 | None:intergenic |
| GTTGCAGGATTTGGAAAAGG+AGG | 0.599248 | 3.1:-9433759 | MS.gene039608:CDS |
| TGCTGCGATGCTCAGTAGAA+CGG | 0.600832 | 3.1:+9433063 | None:intergenic |
| TGACCGGTATTTGAAGCCTG+GGG | 0.601711 | 3.1:-9434669 | MS.gene039608:CDS |
| CTGGTGTAAGTCCTGATGGT+CGG | 0.603021 | 3.1:-9433019 | MS.gene039608:CDS |
| AGGTGGCAGAGAGCAGATGT+TGG | 0.604238 | 3.1:-9436448 | MS.gene039608:CDS |
| TTGATAAGAATCGAGAAGAA+GGG | 0.611350 | 3.1:-9436064 | MS.gene039608:CDS |
| CCATGGATGAAGATCTTGTG+AGG | 0.612648 | 3.1:-9436244 | MS.gene039608:CDS |
| TGGTTCCAAAGAAGCTGTTG+CGG | 0.612908 | 3.1:+9433364 | None:intergenic |
| CCAGAAAGGAGTCGTAGAAG+TGG | 0.615028 | 3.1:-9434822 | MS.gene039608:CDS |
| TACCATGAAGCACCATGAAG+TGG | 0.618767 | 3.1:-9433393 | MS.gene039608:CDS |
| TATTTATCGTCGTCCCACAA+AGG | 0.623600 | 3.1:+9436347 | None:intergenic |
| TAAGGAACTTGTTAACGGGA+AGG | 0.625119 | 3.1:-9436111 | MS.gene039608:CDS |
| AAACAAATTCAATTCAACAA+TGG | 0.630769 | 3.1:-9441698 | MS.gene039608:CDS |
| CTTCATGGTAGCCAAGTCAA+AGG | 0.631303 | 3.1:+9433406 | None:intergenic |
| CTTACACTCCGAAAACACAT+TGG | 0.636031 | 3.1:-9433214 | MS.gene039608:CDS |
| CATGGATGAAGATCTTGTGA+GGG | 0.645841 | 3.1:-9436243 | MS.gene039608:CDS |
| TGTGTTGCAATGTGATTCTG+AGG | 0.646033 | 3.1:+9436026 | None:intergenic |
| AAAAGTGAGATAAACATGCT+TGG | 0.646394 | 3.1:-9441933 | None:intergenic |
| AGAAGCACAATGTTGGAACA+AGG | 0.650060 | 3.1:+9439020 | None:intergenic |
| GCACTTGTACAAGAGCTCAC+GGG | 0.650248 | 3.1:-9441795 | MS.gene039608:CDS |
| GTTCACAACCATGTGATGAA+GGG | 0.654817 | 3.1:-9441909 | MS.gene039608:CDS |
| TATCACTTAACATCTCTCGA+TGG | 0.658911 | 3.1:+9435952 | None:intergenic |
| ATAAAGCACTGAGCCAAGCA+TGG | 0.659169 | 3.1:+9434697 | None:intergenic |
| CACAGCACCATTTAGCAGAG+AGG | 0.673529 | 3.1:+9435757 | None:intergenic |
| GCAAATCAATCTTCACAGCA+GGG | 0.679118 | 3.1:+9433099 | None:intergenic |
| AACAATACATCAACACTGTG+AGG | 0.681464 | 3.1:+9434755 | None:intergenic |
| GGTGCTGTGGTTATGGACGT+CGG | 0.684795 | 3.1:-9435743 | MS.gene039608:CDS |
| GTTAACGGGAAGGACTCAAG+AGG | 0.689762 | 3.1:-9436101 | MS.gene039608:CDS |
| GACCGGTATTTGAAGCCTGG+GGG | 0.694447 | 3.1:-9434668 | MS.gene039608:CDS |
| GTATTGTTAAGTGAATGGAT+GGG | 0.772028 | 3.1:-9434740 | MS.gene039608:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 9432980 | 9441940 | 9432980 | ID=MS.gene039608 |
| chr3.1 | mRNA | 9432980 | 9441940 | 9432980 | ID=MS.gene039608.t1;Parent=MS.gene039608 |
| chr3.1 | exon | 9441673 | 9441940 | 9441673 | ID=MS.gene039608.t1.exon1;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9441673 | 9441940 | 9441673 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| chr3.1 | exon | 9440709 | 9440733 | 9440709 | ID=MS.gene039608.t1.exon2;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9440709 | 9440733 | 9440709 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| chr3.1 | exon | 9438930 | 9439053 | 9438930 | ID=MS.gene039608.t1.exon3;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9438930 | 9439053 | 9438930 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| chr3.1 | exon | 9435950 | 9436468 | 9435950 | ID=MS.gene039608.t1.exon4;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9435950 | 9436468 | 9435950 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| chr3.1 | exon | 9435722 | 9435819 | 9435722 | ID=MS.gene039608.t1.exon5;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9435722 | 9435819 | 9435722 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| chr3.1 | exon | 9434994 | 9435072 | 9434994 | ID=MS.gene039608.t1.exon6;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9434994 | 9435072 | 9434994 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| chr3.1 | exon | 9434640 | 9434900 | 9434640 | ID=MS.gene039608.t1.exon7;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9434640 | 9434900 | 9434640 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| chr3.1 | exon | 9433617 | 9433784 | 9433617 | ID=MS.gene039608.t1.exon8;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9433617 | 9433784 | 9433617 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| chr3.1 | exon | 9432980 | 9433429 | 9432980 | ID=MS.gene039608.t1.exon9;Parent=MS.gene039608.t1 |
| chr3.1 | CDS | 9432980 | 9433429 | 9432980 | ID=cds.MS.gene039608.t1;Parent=MS.gene039608.t1 |
| Gene Sequence |
| Protein sequence |
