Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041124.t1 | XP_003611789.1 | 95.7 | 326 | 14 | 0 | 1 | 326 | 1 | 326 | 1.30E-178 | 635.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041124.t1 | Q9FX85 | 63.5 | 299 | 106 | 2 | 27 | 322 | 48 | 346 | 9.9e-103 | 374.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041124.t1 | G7K822 | 95.7 | 326 | 14 | 0 | 1 | 326 | 1 | 326 | 9.3e-179 | 635.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041124 | MS.gene026111 | PPI |
| MS.gene051844 | MS.gene041124 | PPI |
| MS.gene40613 | MS.gene041124 | PPI |
| MS.gene041124 | MS.gene034512 | PPI |
| MS.gene041124 | MS.gene04636 | PPI |
| MS.gene52672 | MS.gene041124 | PPI |
| MS.gene24862 | MS.gene041124 | PPI |
| MS.gene37256 | MS.gene041124 | PPI |
| MS.gene041124 | MS.gene018002 | PPI |
| MS.gene041124 | MS.gene051232 | PPI |
| MS.gene025145 | MS.gene041124 | PPI |
| MS.gene041124 | MS.gene85778 | PPI |
| MS.gene012254 | MS.gene041124 | PPI |
| MS.gene055984 | MS.gene041124 | PPI |
| MS.gene041124 | MS.gene012253 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041124.t1 | MTR_5g017860 | 95.706 | 326 | 14 | 0 | 1 | 326 | 1 | 326 | 0.0 | 643 |
| MS.gene041124.t1 | MTR_5g017850 | 93.558 | 326 | 21 | 0 | 1 | 326 | 1 | 326 | 0.0 | 632 |
| MS.gene041124.t1 | MTR_2g084080 | 51.724 | 319 | 145 | 3 | 9 | 326 | 7 | 317 | 8.02e-108 | 317 |
| MS.gene041124.t1 | MTR_3g094650 | 52.336 | 321 | 141 | 4 | 11 | 326 | 9 | 322 | 8.68e-108 | 317 |
| MS.gene041124.t1 | MTR_2g084110 | 52.381 | 315 | 138 | 4 | 16 | 326 | 11 | 317 | 7.57e-107 | 315 |
| MS.gene041124.t1 | MTR_1g054205 | 50.765 | 327 | 155 | 5 | 4 | 326 | 2 | 326 | 1.21e-106 | 315 |
| MS.gene041124.t1 | MTR_7g093370 | 50.920 | 326 | 155 | 4 | 5 | 326 | 47 | 371 | 2.25e-106 | 315 |
| MS.gene041124.t1 | MTR_4g125940 | 51.703 | 323 | 145 | 5 | 9 | 326 | 13 | 329 | 3.04e-106 | 313 |
| MS.gene041124.t1 | MTR_2g084010 | 53.481 | 316 | 134 | 5 | 16 | 326 | 11 | 318 | 8.42e-106 | 312 |
| MS.gene041124.t1 | MTR_5g074970 | 49.846 | 325 | 152 | 3 | 6 | 326 | 9 | 326 | 1.12e-105 | 312 |
| MS.gene041124.t1 | MTR_2g084020 | 52.848 | 316 | 136 | 5 | 16 | 326 | 11 | 318 | 2.03e-105 | 311 |
| MS.gene041124.t1 | MTR_2g029815 | 51.475 | 305 | 144 | 3 | 25 | 326 | 27 | 330 | 4.90e-104 | 309 |
| MS.gene041124.t1 | MTR_7g072480 | 50.000 | 322 | 149 | 4 | 6 | 326 | 6 | 316 | 6.43e-104 | 307 |
| MS.gene041124.t1 | MTR_4g083710 | 48.485 | 330 | 160 | 5 | 1 | 326 | 1 | 324 | 6.70e-103 | 305 |
| MS.gene041124.t1 | MTR_2g029820 | 50.492 | 305 | 147 | 3 | 25 | 326 | 27 | 330 | 1.10e-101 | 303 |
| MS.gene041124.t1 | MTR_5g083860 | 48.171 | 328 | 159 | 4 | 3 | 326 | 5 | 325 | 1.28e-101 | 301 |
| MS.gene041124.t1 | MTR_2g084090 | 49.530 | 319 | 150 | 3 | 12 | 326 | 7 | 318 | 2.00e-101 | 301 |
| MS.gene041124.t1 | MTR_2g029830 | 50.164 | 305 | 148 | 3 | 25 | 326 | 26 | 329 | 3.27e-101 | 301 |
| MS.gene041124.t1 | MTR_2g029560 | 48.773 | 326 | 163 | 3 | 4 | 326 | 1 | 325 | 3.29e-101 | 301 |
| MS.gene041124.t1 | MTR_2g084000 | 49.844 | 321 | 147 | 5 | 12 | 326 | 7 | 319 | 7.55e-101 | 299 |
| MS.gene041124.t1 | MTR_7g072510 | 49.068 | 322 | 152 | 4 | 6 | 326 | 2 | 312 | 1.22e-100 | 298 |
| MS.gene041124.t1 | MTR_2g040000 | 50.993 | 302 | 139 | 4 | 31 | 326 | 33 | 331 | 2.03e-100 | 299 |
| MS.gene041124.t1 | MTR_2g029730 | 50.157 | 319 | 154 | 4 | 11 | 326 | 10 | 326 | 6.20e-100 | 298 |
| MS.gene041124.t1 | MTR_2g029800 | 50.164 | 305 | 148 | 3 | 25 | 326 | 27 | 330 | 6.73e-100 | 298 |
| MS.gene041124.t1 | MTR_5g021060 | 51.656 | 302 | 143 | 3 | 27 | 326 | 30 | 330 | 4.93e-99 | 295 |
| MS.gene041124.t1 | MTR_3g094670 | 49.536 | 323 | 154 | 3 | 6 | 326 | 7 | 322 | 5.75e-99 | 295 |
| MS.gene041124.t1 | MTR_4g074995 | 48.428 | 318 | 143 | 5 | 12 | 326 | 9 | 308 | 3.14e-98 | 292 |
| MS.gene041124.t1 | MTR_3g072190 | 47.826 | 322 | 155 | 4 | 10 | 326 | 5 | 318 | 7.03e-98 | 292 |
| MS.gene041124.t1 | MTR_3g466200 | 46.605 | 324 | 163 | 3 | 6 | 326 | 4 | 320 | 9.63e-98 | 291 |
| MS.gene041124.t1 | MTR_8g076820 | 49.524 | 315 | 154 | 4 | 14 | 326 | 19 | 330 | 3.04e-97 | 291 |
| MS.gene041124.t1 | MTR_2g029910 | 48.197 | 305 | 155 | 2 | 25 | 326 | 28 | 332 | 3.57e-97 | 291 |
| MS.gene041124.t1 | MTR_4g029180 | 49.000 | 300 | 142 | 4 | 30 | 326 | 30 | 321 | 9.99e-97 | 289 |
| MS.gene041124.t1 | MTR_2g028980 | 47.416 | 329 | 165 | 5 | 5 | 326 | 3 | 330 | 1.70e-96 | 290 |
| MS.gene041124.t1 | MTR_2g029860 | 47.962 | 319 | 158 | 5 | 15 | 326 | 13 | 330 | 4.68e-96 | 288 |
| MS.gene041124.t1 | MTR_4g029170 | 46.201 | 329 | 163 | 5 | 4 | 326 | 1 | 321 | 6.14e-96 | 287 |
| MS.gene041124.t1 | MTR_2g029850 | 49.180 | 305 | 151 | 3 | 25 | 326 | 27 | 330 | 7.73e-96 | 288 |
| MS.gene041124.t1 | MTR_3g094630 | 48.607 | 323 | 157 | 3 | 6 | 326 | 7 | 322 | 8.00e-95 | 284 |
| MS.gene041124.t1 | MTR_1g115900 | 45.625 | 320 | 159 | 5 | 14 | 326 | 10 | 321 | 8.32e-95 | 285 |
| MS.gene041124.t1 | MTR_2g029750 | 49.508 | 305 | 150 | 3 | 25 | 326 | 27 | 330 | 1.14e-94 | 285 |
| MS.gene041124.t1 | MTR_4g125940 | 53.623 | 276 | 120 | 4 | 56 | 326 | 2 | 274 | 2.02e-94 | 281 |
| MS.gene041124.t1 | MTR_4g029200 | 49.175 | 303 | 145 | 3 | 25 | 326 | 44 | 338 | 1.27e-93 | 281 |
| MS.gene041124.t1 | MTR_2g029740 | 47.869 | 305 | 155 | 3 | 25 | 326 | 27 | 330 | 5.62e-93 | 281 |
| MS.gene041124.t1 | MTR_4g122640 | 49.342 | 304 | 149 | 4 | 25 | 326 | 36 | 336 | 1.72e-92 | 279 |
| MS.gene041124.t1 | MTR_2g088770 | 44.969 | 318 | 169 | 5 | 11 | 326 | 12 | 325 | 3.96e-92 | 277 |
| MS.gene041124.t1 | MTR_4g046713 | 44.164 | 317 | 175 | 2 | 11 | 326 | 11 | 326 | 4.71e-92 | 277 |
| MS.gene041124.t1 | MTR_3g466180 | 48.438 | 320 | 156 | 3 | 8 | 326 | 12 | 323 | 1.18e-91 | 276 |
| MS.gene041124.t1 | MTR_1g022970 | 50.836 | 299 | 143 | 3 | 31 | 326 | 50 | 347 | 2.77e-91 | 276 |
| MS.gene041124.t1 | MTR_4g074990 | 45.820 | 323 | 151 | 5 | 7 | 326 | 4 | 305 | 4.10e-91 | 274 |
| MS.gene041124.t1 | MTR_4g029190 | 48.232 | 311 | 151 | 4 | 19 | 326 | 37 | 340 | 9.72e-91 | 275 |
| MS.gene041124.t1 | MTR_5g074740 | 48.457 | 324 | 150 | 10 | 9 | 326 | 9 | 321 | 1.01e-88 | 269 |
| MS.gene041124.t1 | MTR_5g074760 | 48.148 | 324 | 151 | 10 | 9 | 326 | 9 | 321 | 2.16e-88 | 268 |
| MS.gene041124.t1 | MTR_5g074710 | 48.607 | 323 | 149 | 11 | 10 | 326 | 10 | 321 | 1.69e-87 | 266 |
| MS.gene041124.t1 | MTR_5g074860 | 46.847 | 333 | 160 | 9 | 1 | 325 | 1 | 324 | 2.21e-87 | 265 |
| MS.gene041124.t1 | MTR_5g014100 | 46.926 | 309 | 152 | 5 | 27 | 326 | 26 | 331 | 7.87e-87 | 264 |
| MS.gene041124.t1 | MTR_5g049280 | 45.277 | 307 | 161 | 5 | 26 | 326 | 32 | 337 | 2.69e-86 | 263 |
| MS.gene041124.t1 | MTR_7g026990 | 47.811 | 297 | 145 | 4 | 31 | 326 | 35 | 322 | 3.09e-86 | 262 |
| MS.gene041124.t1 | MTR_2g008710 | 44.848 | 330 | 173 | 4 | 1 | 326 | 1 | 325 | 2.20e-85 | 260 |
| MS.gene041124.t1 | MTR_1g101830 | 40.184 | 326 | 191 | 3 | 1 | 326 | 1 | 322 | 7.03e-84 | 256 |
| MS.gene041124.t1 | MTR_4g030890 | 45.875 | 303 | 159 | 4 | 25 | 326 | 98 | 396 | 3.71e-83 | 258 |
| MS.gene041124.t1 | MTR_7g107520 | 45.597 | 318 | 163 | 7 | 11 | 326 | 11 | 320 | 1.33e-82 | 253 |
| MS.gene041124.t1 | MTR_2g029830 | 50.195 | 257 | 124 | 3 | 73 | 326 | 6 | 261 | 1.85e-82 | 251 |
| MS.gene041124.t1 | MTR_4g133800 | 43.243 | 296 | 159 | 4 | 32 | 326 | 46 | 333 | 2.52e-82 | 253 |
| MS.gene041124.t1 | MTR_3g092990 | 42.271 | 317 | 182 | 1 | 11 | 326 | 10 | 326 | 1.08e-81 | 251 |
| MS.gene041124.t1 | MTR_0155s0040 | 42.715 | 302 | 162 | 4 | 25 | 326 | 25 | 315 | 1.95e-81 | 250 |
| MS.gene041124.t1 | MTR_5g022870 | 42.812 | 320 | 175 | 5 | 9 | 326 | 3 | 316 | 5.71e-81 | 249 |
| MS.gene041124.t1 | MTR_1g077000 | 40.000 | 330 | 179 | 5 | 5 | 326 | 9 | 327 | 6.38e-81 | 249 |
| MS.gene041124.t1 | MTR_2g437770 | 43.189 | 301 | 161 | 4 | 27 | 326 | 50 | 341 | 2.66e-80 | 248 |
| MS.gene041124.t1 | MTR_8g075100 | 43.377 | 302 | 161 | 5 | 27 | 326 | 26 | 319 | 3.29e-80 | 247 |
| MS.gene041124.t1 | MTR_4g074980 | 44.410 | 322 | 146 | 8 | 7 | 326 | 4 | 294 | 3.88e-80 | 246 |
| MS.gene041124.t1 | MTR_1g025980 | 43.849 | 317 | 172 | 4 | 9 | 325 | 7 | 317 | 5.85e-80 | 246 |
| MS.gene041124.t1 | MTR_4g114210 | 42.767 | 318 | 172 | 4 | 14 | 326 | 8 | 320 | 9.09e-80 | 246 |
| MS.gene041124.t1 | MTR_4g031140 | 41.379 | 319 | 182 | 4 | 9 | 326 | 10 | 324 | 3.70e-79 | 245 |
| MS.gene041124.t1 | MTR_6g043280 | 43.366 | 309 | 161 | 5 | 21 | 326 | 35 | 332 | 3.40e-78 | 242 |
| MS.gene041124.t1 | MTR_4g074980 | 48.438 | 256 | 122 | 5 | 7 | 258 | 4 | 253 | 4.95e-78 | 239 |
| MS.gene041124.t1 | MTR_6g027440 | 41.824 | 318 | 179 | 5 | 9 | 326 | 3 | 314 | 1.55e-77 | 240 |
| MS.gene041124.t1 | MTR_3g467600 | 44.172 | 326 | 168 | 7 | 7 | 326 | 7 | 324 | 3.30e-77 | 239 |
| MS.gene041124.t1 | MTR_3g072190 | 48.450 | 258 | 124 | 3 | 70 | 326 | 2 | 251 | 5.34e-77 | 236 |
| MS.gene041124.t1 | MTR_1g086320 | 40.361 | 332 | 190 | 4 | 1 | 326 | 4 | 333 | 8.56e-77 | 238 |
| MS.gene041124.t1 | MTR_7g086820 | 42.157 | 306 | 170 | 4 | 21 | 326 | 14 | 312 | 9.30e-77 | 238 |
| MS.gene041124.t1 | MTR_1g009750 | 40.187 | 321 | 186 | 4 | 10 | 326 | 10 | 328 | 8.05e-75 | 233 |
| MS.gene041124.t1 | MTR_1g086490 | 39.349 | 338 | 192 | 4 | 1 | 326 | 4 | 340 | 5.78e-74 | 231 |
| MS.gene041124.t1 | MTR_1g038680 | 42.434 | 304 | 163 | 5 | 31 | 326 | 33 | 332 | 3.18e-73 | 229 |
| MS.gene041124.t1 | MTR_6g043240 | 42.857 | 308 | 162 | 5 | 21 | 326 | 36 | 331 | 5.01e-73 | 229 |
| MS.gene041124.t1 | MTR_2g008160 | 41.368 | 307 | 170 | 5 | 25 | 326 | 22 | 323 | 1.81e-72 | 227 |
| MS.gene041124.t1 | MTR_1g090760 | 39.628 | 323 | 188 | 6 | 10 | 326 | 9 | 330 | 4.04e-72 | 226 |
| MS.gene041124.t1 | MTR_7g029030 | 40.196 | 306 | 169 | 5 | 26 | 326 | 24 | 320 | 1.92e-70 | 222 |
| MS.gene041124.t1 | MTR_3g092990 | 40.063 | 317 | 178 | 2 | 11 | 326 | 10 | 315 | 8.92e-70 | 220 |
| MS.gene041124.t1 | MTR_7g086870 | 40.667 | 300 | 168 | 4 | 27 | 326 | 22 | 311 | 2.99e-69 | 218 |
| MS.gene041124.t1 | MTR_6g043460 | 41.558 | 308 | 169 | 4 | 21 | 326 | 30 | 328 | 3.16e-69 | 219 |
| MS.gene041124.t1 | MTR_4g087965 | 37.647 | 340 | 191 | 6 | 4 | 322 | 3 | 342 | 5.82e-69 | 219 |
| MS.gene041124.t1 | MTR_5g074860 | 42.814 | 334 | 133 | 11 | 1 | 325 | 1 | 285 | 1.34e-68 | 216 |
| MS.gene041124.t1 | MTR_2g008730 | 40.785 | 331 | 161 | 6 | 1 | 326 | 1 | 301 | 2.84e-67 | 213 |
| MS.gene041124.t1 | MTR_2g067440 | 38.066 | 331 | 173 | 7 | 25 | 325 | 58 | 386 | 1.64e-66 | 214 |
| MS.gene041124.t1 | MTR_2g099175 | 40.328 | 305 | 174 | 5 | 26 | 326 | 35 | 335 | 8.79e-65 | 207 |
| MS.gene041124.t1 | MTR_5g016010 | 35.692 | 325 | 197 | 6 | 11 | 325 | 6 | 328 | 7.98e-64 | 205 |
| MS.gene041124.t1 | MTR_3g105790 | 39.264 | 326 | 188 | 6 | 5 | 326 | 3 | 322 | 1.04e-63 | 204 |
| MS.gene041124.t1 | MTR_4g127670 | 40.065 | 307 | 172 | 7 | 26 | 326 | 23 | 323 | 1.69e-63 | 204 |
| MS.gene041124.t1 | MTR_8g062780 | 36.250 | 320 | 200 | 4 | 10 | 326 | 6 | 324 | 2.21e-63 | 204 |
| MS.gene041124.t1 | MTR_1g009750 | 36.760 | 321 | 180 | 5 | 10 | 326 | 10 | 311 | 6.03e-63 | 202 |
| MS.gene041124.t1 | MTR_2g078610 | 37.273 | 330 | 174 | 6 | 25 | 322 | 74 | 402 | 1.05e-62 | 204 |
| MS.gene041124.t1 | MTR_2g077990 | 37.879 | 330 | 172 | 6 | 25 | 322 | 74 | 402 | 1.23e-62 | 204 |
| MS.gene041124.t1 | MTR_4g095450 | 38.245 | 319 | 181 | 8 | 10 | 322 | 12 | 320 | 6.17e-60 | 195 |
| MS.gene041124.t1 | MTR_0286s0010 | 35.514 | 321 | 200 | 5 | 10 | 326 | 17 | 334 | 2.53e-58 | 191 |
| MS.gene041124.t1 | MTR_6g008075 | 35.514 | 321 | 200 | 5 | 10 | 326 | 17 | 334 | 2.53e-58 | 191 |
| MS.gene041124.t1 | MTR_4g132490 | 35.855 | 304 | 188 | 5 | 26 | 326 | 28 | 327 | 1.50e-57 | 189 |
| MS.gene041124.t1 | MTR_5g033470 | 35.897 | 312 | 183 | 6 | 26 | 326 | 72 | 377 | 1.87e-57 | 190 |
| MS.gene041124.t1 | MTR_2g078280 | 37.188 | 320 | 168 | 6 | 25 | 312 | 74 | 392 | 3.63e-57 | 190 |
| MS.gene041124.t1 | MTR_2g008160 | 36.808 | 307 | 149 | 5 | 25 | 326 | 22 | 288 | 1.18e-56 | 185 |
| MS.gene041124.t1 | MTR_0147s0010 | 34.169 | 319 | 176 | 5 | 27 | 325 | 77 | 381 | 6.33e-53 | 178 |
| MS.gene041124.t1 | MTR_2g067450 | 36.977 | 311 | 176 | 8 | 25 | 325 | 9 | 309 | 3.52e-52 | 174 |
| MS.gene041124.t1 | MTR_2g008160 | 47.305 | 167 | 85 | 2 | 25 | 191 | 22 | 185 | 8.44e-49 | 162 |
| MS.gene041124.t1 | MTR_1g066710 | 32.459 | 305 | 197 | 4 | 25 | 326 | 25 | 323 | 9.42e-48 | 163 |
| MS.gene041124.t1 | MTR_7g072490 | 42.128 | 235 | 73 | 3 | 73 | 306 | 2 | 174 | 1.49e-46 | 157 |
| MS.gene041124.t1 | MTR_4g132110 | 32.895 | 304 | 193 | 5 | 27 | 326 | 32 | 328 | 7.62e-46 | 159 |
| MS.gene041124.t1 | MTR_1g066380 | 32.131 | 305 | 198 | 4 | 25 | 326 | 25 | 323 | 1.19e-45 | 158 |
| MS.gene041124.t1 | MTR_5g074700 | 42.241 | 232 | 107 | 8 | 100 | 326 | 5 | 214 | 2.19e-45 | 154 |
| MS.gene041124.t1 | MTR_1g066640 | 33.117 | 308 | 191 | 5 | 25 | 326 | 25 | 323 | 2.27e-45 | 157 |
| MS.gene041124.t1 | MTR_4g132110 | 32.686 | 309 | 192 | 6 | 27 | 326 | 32 | 333 | 1.49e-44 | 155 |
| MS.gene041124.t1 | MTR_1g066680 | 33.333 | 309 | 188 | 6 | 25 | 326 | 25 | 322 | 7.78e-44 | 153 |
| MS.gene041124.t1 | MTR_3g105790 | 42.194 | 237 | 131 | 5 | 94 | 326 | 12 | 246 | 3.77e-42 | 146 |
| MS.gene041124.t1 | MTR_3g072260 | 57.522 | 113 | 48 | 0 | 26 | 138 | 25 | 137 | 5.33e-41 | 140 |
| MS.gene041124.t1 | MTR_3g072210 | 42.408 | 191 | 99 | 5 | 139 | 326 | 56 | 238 | 1.82e-38 | 137 |
| MS.gene041124.t1 | MTR_2g029880 | 39.594 | 197 | 105 | 4 | 133 | 326 | 3 | 188 | 3.37e-37 | 132 |
| MS.gene041124.t1 | MTR_1g066380 | 31.274 | 259 | 169 | 4 | 71 | 326 | 3 | 255 | 9.00e-34 | 125 |
| MS.gene041124.t1 | MTR_2g077980 | 33.096 | 281 | 139 | 10 | 89 | 326 | 11 | 285 | 3.32e-30 | 116 |
| MS.gene041124.t1 | MTR_2g078560 | 31.163 | 215 | 117 | 4 | 139 | 322 | 102 | 316 | 5.84e-25 | 102 |
| MS.gene041124.t1 | MTR_7g086790 | 33.862 | 189 | 103 | 5 | 74 | 262 | 17 | 183 | 1.08e-23 | 96.7 |
| MS.gene041124.t1 | MTR_5g058120 | 35.758 | 165 | 92 | 4 | 161 | 324 | 6 | 157 | 5.18e-22 | 93.6 |
| MS.gene041124.t1 | MTR_4g114220 | 54.545 | 88 | 30 | 2 | 47 | 134 | 23 | 100 | 8.17e-21 | 87.4 |
| MS.gene041124.t1 | MTR_1g089005 | 42.520 | 127 | 63 | 3 | 16 | 133 | 1 | 126 | 5.05e-20 | 85.5 |
| MS.gene041124.t1 | MTR_6g048160 | 62.319 | 69 | 22 | 2 | 66 | 134 | 22 | 86 | 5.37e-20 | 83.6 |
| MS.gene041124.t1 | MTR_3g462850 | 34.507 | 142 | 87 | 4 | 190 | 326 | 9 | 149 | 2.79e-18 | 80.9 |
| MS.gene041124.t1 | MTR_5g074770 | 48.352 | 91 | 44 | 3 | 237 | 325 | 19 | 108 | 1.39e-16 | 74.7 |
| MS.gene041124.t1 | MTR_2g029930 | 43.434 | 99 | 28 | 3 | 25 | 109 | 17 | 101 | 4.47e-16 | 73.2 |
| MS.gene041124.t1 | MTR_7g107500 | 43.434 | 99 | 54 | 2 | 228 | 326 | 1 | 97 | 4.53e-16 | 73.2 |
| MS.gene041124.t1 | MTR_1g098320 | 36.842 | 95 | 59 | 1 | 233 | 326 | 30 | 124 | 4.33e-14 | 68.9 |
| MS.gene041124.t1 | MTR_4g031040 | 32.184 | 174 | 72 | 5 | 88 | 260 | 3 | 131 | 4.81e-14 | 68.6 |
| MS.gene041124.t1 | MTR_7g086810 | 33.613 | 119 | 53 | 1 | 27 | 145 | 6 | 98 | 1.07e-13 | 70.1 |
| MS.gene041124.t1 | MTR_7g086785 | 43.836 | 73 | 40 | 1 | 73 | 145 | 4 | 75 | 1.55e-11 | 61.6 |
| MS.gene041124.t1 | MTR_4g012865 | 38.235 | 68 | 42 | 0 | 27 | 94 | 77 | 144 | 1.80e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041124.t1 | AT1G49570 | 63.036 | 303 | 109 | 2 | 23 | 322 | 44 | 346 | 1.48e-131 | 379 |
| MS.gene041124.t1 | AT5G19890 | 53.517 | 327 | 142 | 4 | 4 | 326 | 7 | 327 | 3.70e-114 | 333 |
| MS.gene041124.t1 | AT5G06730 | 54.426 | 305 | 135 | 3 | 25 | 326 | 31 | 334 | 3.61e-112 | 330 |
| MS.gene041124.t1 | AT5G06720 | 51.803 | 305 | 143 | 3 | 25 | 326 | 30 | 333 | 1.41e-104 | 310 |
| MS.gene041124.t1 | AT4G36430 | 48.845 | 303 | 152 | 3 | 26 | 326 | 29 | 330 | 1.14e-101 | 302 |
| MS.gene041124.t1 | AT2G18150 | 46.061 | 330 | 164 | 4 | 10 | 326 | 8 | 336 | 1.97e-100 | 299 |
| MS.gene041124.t1 | AT2G38390 | 49.684 | 316 | 154 | 4 | 15 | 326 | 19 | 333 | 3.93e-100 | 299 |
| MS.gene041124.t1 | AT5G05340 | 47.557 | 307 | 152 | 3 | 22 | 326 | 25 | 324 | 2.53e-98 | 293 |
| MS.gene041124.t1 | AT1G44970 | 51.475 | 305 | 144 | 3 | 25 | 326 | 43 | 346 | 4.42e-97 | 291 |
| MS.gene041124.t1 | AT2G18140 | 48.344 | 302 | 153 | 3 | 27 | 326 | 35 | 335 | 1.83e-96 | 289 |
| MS.gene041124.t1 | AT2G38380 | 48.438 | 320 | 160 | 4 | 11 | 326 | 15 | 333 | 2.54e-94 | 284 |
| MS.gene041124.t1 | AT1G14550 | 45.794 | 321 | 163 | 5 | 10 | 326 | 8 | 321 | 5.27e-94 | 282 |
| MS.gene041124.t1 | AT3G32980 | 46.341 | 328 | 170 | 4 | 4 | 326 | 8 | 334 | 2.43e-93 | 281 |
| MS.gene041124.t1 | AT5G19880 | 47.401 | 327 | 165 | 5 | 6 | 326 | 4 | 329 | 1.25e-92 | 279 |
| MS.gene041124.t1 | AT3G49120 | 46.130 | 323 | 168 | 4 | 9 | 326 | 14 | 335 | 3.32e-92 | 279 |
| MS.gene041124.t1 | AT1G14540 | 46.835 | 316 | 156 | 5 | 16 | 326 | 7 | 315 | 4.32e-92 | 277 |
| MS.gene041124.t1 | AT4G08780 | 47.604 | 313 | 152 | 5 | 22 | 326 | 19 | 327 | 1.74e-90 | 274 |
| MS.gene041124.t1 | AT5G58400 | 44.880 | 332 | 170 | 4 | 1 | 326 | 1 | 325 | 4.16e-90 | 272 |
| MS.gene041124.t1 | AT3G49110 | 46.319 | 326 | 163 | 5 | 9 | 326 | 15 | 336 | 4.72e-90 | 273 |
| MS.gene041124.t1 | AT1G68850 | 44.272 | 323 | 172 | 6 | 11 | 326 | 14 | 335 | 2.81e-89 | 271 |
| MS.gene041124.t1 | AT3G50990 | 46.130 | 323 | 168 | 4 | 9 | 326 | 20 | 341 | 3.31e-89 | 271 |
| MS.gene041124.t1 | AT5G58390 | 46.708 | 319 | 160 | 3 | 11 | 326 | 5 | 316 | 6.47e-89 | 269 |
| MS.gene041124.t1 | AT5G15180 | 46.372 | 317 | 163 | 6 | 13 | 326 | 17 | 329 | 7.61e-89 | 269 |
| MS.gene041124.t1 | AT4G08770 | 47.604 | 313 | 152 | 5 | 22 | 326 | 19 | 327 | 1.37e-88 | 269 |
| MS.gene041124.t1 | AT5G66390 | 44.109 | 331 | 174 | 5 | 6 | 326 | 4 | 333 | 1.56e-88 | 269 |
| MS.gene041124.t1 | AT3G03670 | 45.171 | 321 | 167 | 5 | 10 | 326 | 6 | 321 | 1.71e-88 | 268 |
| MS.gene041124.t1 | AT4G16270 | 48.013 | 302 | 152 | 4 | 27 | 326 | 50 | 348 | 1.08e-87 | 267 |
| MS.gene041124.t1 | AT3G01190 | 46.296 | 324 | 167 | 6 | 5 | 326 | 3 | 321 | 1.09e-87 | 266 |
| MS.gene041124.t1 | AT1G05260 | 43.769 | 329 | 178 | 7 | 1 | 326 | 1 | 325 | 1.60e-87 | 266 |
| MS.gene041124.t1 | AT3G21770 | 44.333 | 300 | 163 | 4 | 25 | 322 | 27 | 324 | 4.57e-84 | 257 |
| MS.gene041124.t1 | AT2G35380 | 43.402 | 341 | 167 | 6 | 4 | 326 | 3 | 335 | 4.87e-84 | 257 |
| MS.gene041124.t1 | AT4G11290 | 43.750 | 304 | 169 | 2 | 25 | 326 | 23 | 326 | 8.61e-84 | 256 |
| MS.gene041124.t1 | AT5G17820 | 41.956 | 317 | 174 | 4 | 10 | 326 | 7 | 313 | 7.11e-83 | 253 |
| MS.gene041124.t1 | AT5G51890 | 40.252 | 318 | 187 | 2 | 9 | 326 | 8 | 322 | 1.42e-82 | 253 |
| MS.gene041124.t1 | AT5G64120 | 42.462 | 325 | 174 | 5 | 9 | 326 | 10 | 328 | 4.79e-82 | 252 |
| MS.gene041124.t1 | AT2G22420 | 43.302 | 321 | 173 | 5 | 8 | 326 | 6 | 319 | 1.89e-81 | 250 |
| MS.gene041124.t1 | AT5G17820 | 41.956 | 317 | 174 | 4 | 10 | 326 | 60 | 366 | 1.94e-81 | 251 |
| MS.gene041124.t1 | AT1G05240 | 43.667 | 300 | 161 | 6 | 27 | 322 | 26 | 321 | 1.47e-79 | 245 |
| MS.gene041124.t1 | AT1G05250 | 43.667 | 300 | 161 | 6 | 27 | 322 | 26 | 321 | 1.47e-79 | 245 |
| MS.gene041124.t1 | AT5G42180 | 41.509 | 318 | 181 | 3 | 8 | 325 | 4 | 316 | 5.54e-79 | 244 |
| MS.gene041124.t1 | AT4G33420 | 42.157 | 306 | 166 | 4 | 21 | 326 | 31 | 325 | 2.30e-78 | 242 |
| MS.gene041124.t1 | AT4G33420 | 42.157 | 306 | 166 | 4 | 21 | 326 | 78 | 372 | 7.51e-78 | 243 |
| MS.gene041124.t1 | AT2G41480 | 42.462 | 325 | 175 | 7 | 8 | 326 | 10 | 328 | 1.15e-77 | 241 |
| MS.gene041124.t1 | AT4G25980 | 40.717 | 307 | 173 | 4 | 25 | 326 | 24 | 326 | 2.06e-75 | 235 |
| MS.gene041124.t1 | AT5G39580 | 42.320 | 319 | 174 | 6 | 9 | 326 | 10 | 319 | 2.65e-74 | 232 |
| MS.gene041124.t1 | AT4G26010 | 41.195 | 318 | 167 | 7 | 12 | 326 | 9 | 309 | 3.83e-74 | 231 |
| MS.gene041124.t1 | AT4G26010 | 41.195 | 318 | 167 | 7 | 12 | 326 | 37 | 337 | 4.83e-74 | 232 |
| MS.gene041124.t1 | AT1G30870 | 42.244 | 303 | 164 | 5 | 27 | 326 | 51 | 345 | 6.30e-73 | 229 |
| MS.gene041124.t1 | AT4G33870 | 37.538 | 333 | 172 | 4 | 25 | 322 | 66 | 397 | 2.63e-72 | 229 |
| MS.gene041124.t1 | AT3G49960 | 40.184 | 326 | 184 | 7 | 9 | 326 | 7 | 329 | 4.78e-72 | 226 |
| MS.gene041124.t1 | AT1G71695 | 39.935 | 308 | 173 | 5 | 23 | 326 | 40 | 339 | 1.82e-71 | 226 |
| MS.gene041124.t1 | AT2G24800 | 43.648 | 307 | 162 | 5 | 25 | 326 | 29 | 329 | 3.00e-71 | 224 |
| MS.gene041124.t1 | AT2G18980 | 39.752 | 322 | 181 | 7 | 11 | 326 | 9 | 323 | 1.27e-70 | 223 |
| MS.gene041124.t1 | AT2G39040 | 42.532 | 308 | 168 | 7 | 26 | 326 | 45 | 350 | 1.99e-70 | 223 |
| MS.gene041124.t1 | AT5G67400 | 40.391 | 307 | 176 | 5 | 25 | 326 | 25 | 329 | 1.06e-69 | 220 |
| MS.gene041124.t1 | AT4G37530 | 41.100 | 309 | 177 | 4 | 22 | 326 | 22 | 329 | 1.24e-69 | 220 |
| MS.gene041124.t1 | AT1G77100 | 39.571 | 326 | 179 | 8 | 9 | 326 | 4 | 319 | 1.28e-69 | 219 |
| MS.gene041124.t1 | AT5G64100 | 40.728 | 302 | 168 | 5 | 28 | 326 | 38 | 331 | 3.55e-69 | 219 |
| MS.gene041124.t1 | AT4G31760 | 40.557 | 323 | 178 | 7 | 11 | 326 | 11 | 326 | 2.54e-68 | 216 |
| MS.gene041124.t1 | AT5G64110 | 41.137 | 299 | 167 | 6 | 31 | 326 | 38 | 330 | 6.01e-68 | 216 |
| MS.gene041124.t1 | AT5G47000 | 36.533 | 323 | 194 | 5 | 10 | 326 | 13 | 330 | 1.84e-67 | 214 |
| MS.gene041124.t1 | AT5G24070 | 40.064 | 312 | 178 | 5 | 19 | 326 | 29 | 335 | 5.45e-67 | 214 |
| MS.gene041124.t1 | AT3G28200 | 38.961 | 308 | 172 | 4 | 25 | 326 | 19 | 316 | 6.75e-67 | 213 |
| MS.gene041124.t1 | AT4G17690 | 39.274 | 303 | 175 | 4 | 27 | 326 | 26 | 322 | 1.17e-66 | 212 |
| MS.gene041124.t1 | AT4G37520 | 38.907 | 311 | 175 | 5 | 25 | 326 | 25 | 329 | 3.22e-66 | 211 |
| MS.gene041124.t1 | AT2G34060 | 36.795 | 337 | 195 | 6 | 4 | 323 | 8 | 343 | 1.17e-65 | 210 |
| MS.gene041124.t1 | AT5G14130 | 40.065 | 307 | 173 | 6 | 25 | 326 | 30 | 330 | 1.61e-65 | 209 |
| MS.gene041124.t1 | AT4G30170 | 38.387 | 310 | 178 | 7 | 23 | 326 | 23 | 325 | 3.49e-65 | 208 |
| MS.gene041124.t1 | AT5G14130 | 38.602 | 329 | 188 | 7 | 6 | 326 | 49 | 371 | 4.48e-65 | 209 |
| MS.gene041124.t1 | AT2G43480 | 39.934 | 303 | 172 | 6 | 28 | 326 | 39 | 335 | 2.89e-64 | 206 |
| MS.gene041124.t1 | AT4G37520 | 38.585 | 311 | 173 | 6 | 25 | 326 | 25 | 326 | 3.30e-64 | 206 |
| MS.gene041124.t1 | AT1G34510 | 38.365 | 318 | 180 | 7 | 10 | 326 | 7 | 309 | 1.69e-63 | 204 |
| MS.gene041124.t1 | AT5G40150 | 37.013 | 308 | 179 | 4 | 25 | 326 | 30 | 328 | 2.49e-61 | 199 |
| MS.gene041124.t1 | AT5G22410 | 36.196 | 326 | 196 | 8 | 4 | 324 | 5 | 323 | 8.15e-60 | 195 |
| MS.gene041124.t1 | AT2G35380 | 43.254 | 252 | 121 | 5 | 89 | 326 | 4 | 247 | 3.07e-59 | 191 |
| MS.gene041124.t1 | AT4G37530 | 42.308 | 260 | 145 | 4 | 22 | 277 | 22 | 280 | 5.29e-59 | 191 |
| MS.gene041124.t1 | AT1G24110 | 36.970 | 330 | 182 | 9 | 12 | 326 | 4 | 322 | 2.45e-55 | 183 |
| MS.gene041124.t1 | AT4G21960 | 34.211 | 304 | 189 | 5 | 27 | 326 | 31 | 327 | 9.04e-50 | 169 |
| MS.gene041124.t1 | AT2G37130 | 34.740 | 308 | 185 | 7 | 26 | 326 | 29 | 327 | 2.22e-48 | 165 |
| MS.gene041124.t1 | AT2G37130 | 34.868 | 304 | 182 | 7 | 30 | 326 | 2 | 296 | 2.90e-48 | 164 |
| MS.gene041124.t1 | AT4G25980 | 45.665 | 173 | 91 | 2 | 25 | 197 | 69 | 238 | 3.30e-47 | 161 |
| MS.gene041124.t1 | AT3G17070 | 33.553 | 304 | 196 | 6 | 27 | 326 | 38 | 339 | 2.92e-46 | 160 |
| MS.gene041124.t1 | AT5G39580 | 45.078 | 193 | 99 | 3 | 9 | 201 | 10 | 195 | 4.50e-46 | 156 |
| MS.gene041124.t1 | AT2G24800 | 45.665 | 173 | 87 | 3 | 25 | 195 | 29 | 196 | 1.20e-39 | 140 |
| MS.gene041124.t1 | AT3G17070 | 32.061 | 262 | 171 | 7 | 69 | 326 | 18 | 276 | 9.88e-32 | 120 |
| MS.gene041124.t1 | AT3G42570 | 42.647 | 68 | 38 | 1 | 99 | 165 | 53 | 120 | 9.10e-11 | 59.7 |
Find 51 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGAGTAGAGGGCCATTT+TGG | 0.168625 | 5.2:-10018282 | MS.gene041124:intron |
| TGCAGTTTCTGTTGAGAAAA+TGG | 0.175355 | 5.2:-10017576 | MS.gene041124:CDS |
| CCTCTTAATGAATTCTTATT+AGG | 0.231906 | 5.2:+10018547 | None:intergenic |
| GATGATTCAGACACACTAAA+AGG | 0.290985 | 5.2:-10018586 | MS.gene041124:CDS |
| TTAACTATTCTGTTCAGATT+TGG | 0.299173 | 5.2:+10018857 | None:intergenic |
| AGCTGTTTCGGACACCAATT+TGG | 0.311219 | 5.2:-10017765 | MS.gene041124:CDS |
| CAATCAGACCAAGCTCTATT+AGG | 0.312839 | 5.2:-10017665 | MS.gene041124:CDS |
| GTGTCCGAAACAGCTTGATT+TGG | 0.350241 | 5.2:+10017773 | None:intergenic |
| AGGATCCAATGGAGCCAAAT+TGG | 0.353753 | 5.2:+10017751 | None:intergenic |
| TGATGTTCTTACGGGACAAC+AGG | 0.360814 | 5.2:-10017546 | MS.gene041124:CDS |
| CCTAATAAGAATTCATTAAG+AGG | 0.373805 | 5.2:-10018547 | MS.gene041124:CDS |
| TGACGGCACAACTGCTTCAT+TGG | 0.384230 | 5.2:-10017642 | MS.gene041124:CDS |
| GGACACCAATTTGGCTCCAT+TGG | 0.385639 | 5.2:-10017756 | MS.gene041124:CDS |
| CCAAGAGGTACAGCCCAAAA+TGG | 0.386408 | 5.2:+10018268 | None:intergenic |
| CGGGACAACAGGGTCAAATA+AGG | 0.392480 | 5.2:-10017535 | MS.gene041124:CDS |
| TATGCAGGTGCACACACCTT+TGG | 0.410019 | 5.2:-10017905 | MS.gene041124:intron |
| ATGTCCAAATCAAGCTGTTT+CGG | 0.413591 | 5.2:-10017777 | MS.gene041124:CDS |
| CTATTCGACTTTGGTGGCTC+TGG | 0.414711 | 5.2:-10017851 | MS.gene041124:CDS |
| GGTCGCATTGATGTTCTTAC+GGG | 0.420596 | 5.2:-10017554 | MS.gene041124:CDS |
| AGCAGCAATCCTTGAGTCAT+TGG | 0.423951 | 5.2:+10018811 | None:intergenic |
| TCAGCACATGACACTGTGTT+AGG | 0.424517 | 5.2:+10018478 | None:intergenic |
| GGGTCGCATTGATGTTCTTA+CGG | 0.427573 | 5.2:-10017555 | MS.gene041124:CDS |
| TTACATTGACGAAACAATCA+TGG | 0.430670 | 5.2:+10018768 | None:intergenic |
| TACTTGATATACAGCATCTC+TGG | 0.434277 | 5.2:+10018438 | None:intergenic |
| GCAGTTTCTGTTGAGAAAAT+GGG | 0.438276 | 5.2:-10017575 | MS.gene041124:CDS |
| AAGACCTTTGGAAATGAACT+TGG | 0.454907 | 5.2:+10018165 | None:intergenic |
| ATGTGATGGATCTGTGCTAC+TGG | 0.464722 | 5.2:-10018608 | MS.gene041124:CDS |
| CGAAACAATCATGGAAATGA+AGG | 0.464987 | 5.2:+10018777 | None:intergenic |
| TCAAATGTGTTGCTTGTGAC+AGG | 0.470077 | 5.2:+10017731 | None:intergenic |
| AAACCAAGACTATTCGACTT+TGG | 0.476500 | 5.2:-10017860 | MS.gene041124:CDS |
| ATGATTCAGACACACTAAAA+GGG | 0.487747 | 5.2:-10018585 | MS.gene041124:CDS |
| TGAACCTCTAGAAAACATTA+CGG | 0.495557 | 5.2:-10018188 | MS.gene041124:CDS |
| GGTGTTACTTAGGGATGTGA+TGG | 0.495687 | 5.2:-10018622 | MS.gene041124:intron |
| CCAAGACTATTCGACTTTGG+TGG | 0.503120 | 5.2:-10017857 | MS.gene041124:CDS |
| CCACCAAAGTCGAATAGTCT+TGG | 0.511471 | 5.2:+10017857 | None:intergenic |
| AAGGATGTAGCAGTGCTCTC+AGG | 0.511701 | 5.2:-10018136 | MS.gene041124:intron |
| TGCCGTCACCTAATAGAGCT+TGG | 0.533146 | 5.2:+10017657 | None:intergenic |
| GTACCTCTTGGTCGTAGAGA+TGG | 0.545618 | 5.2:-10018256 | MS.gene041124:CDS |
| TCTAGAGGTTCAAAGGGTGA+TGG | 0.550333 | 5.2:+10018199 | None:intergenic |
| ACGGCCAAGTTCATTTCCAA+AGG | 0.572086 | 5.2:-10018169 | MS.gene041124:CDS |
| TGGTTAACTATTATAGCAAG+TGG | 0.574333 | 5.2:-10017622 | MS.gene041124:CDS |
| TAGAGTTGAGAGCACACAAG+TGG | 0.587545 | 5.2:+10018905 | None:intergenic |
| CAGCTATAGCCAATGACTCA+AGG | 0.590497 | 5.2:-10018820 | MS.gene041124:CDS |
| TTGCTTGTGACAGGATCCAA+TGG | 0.612319 | 5.2:+10017740 | None:intergenic |
| TGATTCAGACACACTAAAAG+GGG | 0.629420 | 5.2:-10018584 | MS.gene041124:CDS |
| GACCAAGCTCTATTAGGTGA+CGG | 0.632886 | 5.2:-10017659 | MS.gene041124:CDS |
| ATTTGCGTCGCTCTCACTCG+CGG | 0.635311 | 5.2:+10018228 | None:intergenic |
| AGAAGTGATGAATCAAGTGA+TGG | 0.657845 | 5.2:+10017818 | None:intergenic |
| GATGTTCTTACGGGACAACA+GGG | 0.658146 | 5.2:-10017545 | MS.gene041124:CDS |
| AAAGCATTGAGCAAAGCCAA+AGG | 0.681054 | 5.2:+10017889 | None:intergenic |
| GTGCCATCTCTACGACCAAG+AGG | 0.689151 | 5.2:+10018253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTATAAAATAATTGTGA+AGG | + | chr5.2:10018373-10018392 | None:intergenic | 15.0% |
| !!! | AATTTTAAGTAACAATATGT+TGG | + | chr5.2:10018157-10018176 | None:intergenic | 15.0% |
| !!! | GTTAATTTCTTATTTCATTT+TGG | - | chr5.2:10017833-10017852 | MS.gene041124:CDS | 15.0% |
| !! | AATGAAATATTAAGGATCTA+AGG | + | chr5.2:10018467-10018486 | None:intergenic | 20.0% |
| !! | TCAAATAAGGAAAAATTGTA+GGG | - | chr5.2:10018954-10018973 | MS.gene041124:CDS | 20.0% |
| !! | TCAGATTCAATGAAATATTA+AGG | + | chr5.2:10018475-10018494 | None:intergenic | 20.0% |
| ! | CCTAATAAGAATTCATTAAG+AGG | - | chr5.2:10017929-10017948 | MS.gene041124:intron | 25.0% |
| ! | CCTCTTAATGAATTCTTATT+AGG | + | chr5.2:10017932-10017951 | None:intergenic | 25.0% |
| ! | GTCAAATAAGGAAAAATTGT+AGG | - | chr5.2:10018953-10018972 | MS.gene041124:CDS | 25.0% |
| ! | TTAACTATTCTGTTCAGATT+TGG | + | chr5.2:10017622-10017641 | None:intergenic | 25.0% |
| !! | AAATCTCTGAAAAACAGAAT+AGG | + | chr5.2:10018880-10018899 | None:intergenic | 25.0% |
| !!! | AAAAATGTTTTGAGCAATTC+TGG | - | chr5.2:10018781-10018800 | MS.gene041124:CDS | 25.0% |
| !!! | ATTTCATTTTGGTGTTACTT+AGG | - | chr5.2:10017844-10017863 | MS.gene041124:CDS | 25.0% |
| !!! | TTTCATTTTGGTGTTACTTA+GGG | - | chr5.2:10017845-10017864 | MS.gene041124:CDS | 25.0% |
| ATGATTCAGACACACTAAAA+GGG | - | chr5.2:10017891-10017910 | MS.gene041124:CDS | 30.0% | |
| GTTTAAATCCTTAACTCCAA+AGG | - | chr5.2:10018416-10018435 | MS.gene041124:intron | 30.0% | |
| TGGTTAACTATTATAGCAAG+TGG | - | chr5.2:10018854-10018873 | MS.gene041124:CDS | 30.0% | |
| TTACATTGACGAAACAATCA+TGG | + | chr5.2:10017711-10017730 | None:intergenic | 30.0% | |
| TTCCAAAGGTCTTGAAAAAA+AGG | - | chr5.2:10018321-10018340 | MS.gene041124:intron | 30.0% | |
| ! | TGAACCTCTAGAAAACATTA+CGG | - | chr5.2:10018288-10018307 | MS.gene041124:intron | 30.0% |
| ! | TTTTTACATATGAGACCGAA+TGG | - | chr5.2:10018504-10018523 | MS.gene041124:CDS | 30.0% |
| !! | AATGTTTTCTAGAGGTTCAA+AGG | + | chr5.2:10018287-10018306 | None:intergenic | 30.0% |
| !! | ATGTTTTCTAGAGGTTCAAA+GGG | + | chr5.2:10018286-10018305 | None:intergenic | 30.0% |
| !!! | ATCCTTTTTTTCAAGACCTT+TGG | + | chr5.2:10018326-10018345 | None:intergenic | 30.0% |
| AAACCAAGACTATTCGACTT+TGG | - | chr5.2:10018616-10018635 | MS.gene041124:intron | 35.0% | |
| AATCCTTAACTCCAAAGGTT+TGG | - | chr5.2:10018421-10018440 | MS.gene041124:intron | 35.0% | |
| AGAAGTGATGAATCAAGTGA+TGG | + | chr5.2:10018661-10018680 | None:intergenic | 35.0% | |
| AGTCAATACACGTGTGAAAT+TGG | + | chr5.2:10018550-10018569 | None:intergenic | 35.0% | |
| ATGTCCAAATCAAGCTGTTT+CGG | - | chr5.2:10018699-10018718 | MS.gene041124:intron | 35.0% | |
| CGAAACAATCATGGAAATGA+AGG | + | chr5.2:10017702-10017721 | None:intergenic | 35.0% | |
| GATGATTCAGACACACTAAA+AGG | - | chr5.2:10017890-10017909 | MS.gene041124:CDS | 35.0% | |
| GCAGTTTCTGTTGAGAAAAT+GGG | - | chr5.2:10018901-10018920 | MS.gene041124:CDS | 35.0% | |
| TACTTGATATACAGCATCTC+TGG | + | chr5.2:10018041-10018060 | None:intergenic | 35.0% | |
| TGATTCAGACACACTAAAAG+GGG | - | chr5.2:10017892-10017911 | MS.gene041124:CDS | 35.0% | |
| TGCAGTTTCTGTTGAGAAAA+TGG | - | chr5.2:10018900-10018919 | MS.gene041124:CDS | 35.0% | |
| TTACTACTAGACCAAACCTT+TGG | + | chr5.2:10018435-10018454 | None:intergenic | 35.0% | |
| ! | AAGACCTTTGGAAATGAACT+TGG | + | chr5.2:10018314-10018333 | None:intergenic | 35.0% |
| ! | GGTTTGGTCTAGTAGTAAAA+AGG | - | chr5.2:10018437-10018456 | MS.gene041124:intron | 35.0% |
| !!! | TTTTTTCTTCCCAGAGTAGA+GGG | - | chr5.2:10018185-10018204 | MS.gene041124:CDS | 35.0% |
| !!! | TTTTTTTCTTCCCAGAGTAG+AGG | - | chr5.2:10018184-10018203 | MS.gene041124:CDS | 35.0% |
| CAATCAGACCAAGCTCTATT+AGG | - | chr5.2:10018811-10018830 | MS.gene041124:CDS | 40.0% | |
| CGACTAACTAGTACACCATT+CGG | + | chr5.2:10018522-10018541 | None:intergenic | 40.0% | |
| ! | TTGGCCGTAATGTTTTCTAG+AGG | + | chr5.2:10018295-10018314 | None:intergenic | 40.0% |
| !! | AAAGCATTGAGCAAAGCCAA+AGG | + | chr5.2:10018590-10018609 | None:intergenic | 40.0% |
| !! | AGACCAAACCTTTGGAGTTA+AGG | + | chr5.2:10018427-10018446 | None:intergenic | 40.0% |
| !! | CACGTGTATTGACTATATGC+AGG | - | chr5.2:10018556-10018575 | MS.gene041124:CDS | 40.0% |
| !! | TCAAATGTGTTGCTTGTGAC+AGG | + | chr5.2:10018748-10018767 | None:intergenic | 40.0% |
| ACGGCCAAGTTCATTTCCAA+AGG | - | chr5.2:10018307-10018326 | MS.gene041124:intron | 45.0% | |
| AGCAGCAATCCTTGAGTCAT+TGG | + | chr5.2:10017668-10017687 | None:intergenic | 45.0% | |
| AGGATCCAATGGAGCCAAAT+TGG | + | chr5.2:10018728-10018747 | None:intergenic | 45.0% | |
| CAGCTATAGCCAATGACTCA+AGG | - | chr5.2:10017656-10017675 | MS.gene041124:CDS | 45.0% | |
| CCAAGACTATTCGACTTTGG+TGG | - | chr5.2:10018619-10018638 | MS.gene041124:intron | 45.0% | |
| CCACCAAAGTCGAATAGTCT+TGG | + | chr5.2:10018622-10018641 | None:intergenic | 45.0% | |
| GACCAAGCTCTATTAGGTGA+CGG | - | chr5.2:10018817-10018836 | MS.gene041124:CDS | 45.0% | |
| GATGTTCTTACGGGACAACA+GGG | - | chr5.2:10018931-10018950 | MS.gene041124:CDS | 45.0% | |
| GTGTCCGAAACAGCTTGATT+TGG | + | chr5.2:10018706-10018725 | None:intergenic | 45.0% | |
| TCAGCACATGACACTGTGTT+AGG | + | chr5.2:10018001-10018020 | None:intergenic | 45.0% | |
| TCTAGAGGTTCAAAGGGTGA+TGG | + | chr5.2:10018280-10018299 | None:intergenic | 45.0% | |
| TGATGTTCTTACGGGACAAC+AGG | - | chr5.2:10018930-10018949 | MS.gene041124:CDS | 45.0% | |
| TTGCTTGTGACAGGATCCAA+TGG | + | chr5.2:10018739-10018758 | None:intergenic | 45.0% | |
| ! | AGCTGTTTCGGACACCAATT+TGG | - | chr5.2:10018711-10018730 | MS.gene041124:intron | 45.0% |
| ! | GGGTCGCATTGATGTTCTTA+CGG | - | chr5.2:10018921-10018940 | MS.gene041124:CDS | 45.0% |
| ! | GGTCGCATTGATGTTCTTAC+GGG | - | chr5.2:10018922-10018941 | MS.gene041124:CDS | 45.0% |
| ! | TAGAGTTGAGAGCACACAAG+TGG | + | chr5.2:10017574-10017593 | None:intergenic | 45.0% |
| !! | ATGTGATGGATCTGTGCTAC+TGG | - | chr5.2:10017868-10017887 | MS.gene041124:CDS | 45.0% |
| !! | GGTGTTACTTAGGGATGTGA+TGG | - | chr5.2:10017854-10017873 | MS.gene041124:CDS | 45.0% |
| AAGGATGTAGCAGTGCTCTC+AGG | - | chr5.2:10018340-10018359 | MS.gene041124:intron | 50.0% | |
| CCAAAATGGCCCTCTACTCT+GGG | + | chr5.2:10018197-10018216 | None:intergenic | 50.0% | |
| CGGGACAACAGGGTCAAATA+AGG | - | chr5.2:10018941-10018960 | MS.gene041124:CDS | 50.0% | |
| GTACCTCTTGGTCGTAGAGA+TGG | - | chr5.2:10018220-10018239 | MS.gene041124:CDS | 50.0% | |
| TATGCAGGTGCACACACCTT+TGG | - | chr5.2:10018571-10018590 | MS.gene041124:CDS | 50.0% | |
| TGACGGCACAACTGCTTCAT+TGG | - | chr5.2:10018834-10018853 | MS.gene041124:CDS | 50.0% | |
| TGCCGTCACCTAATAGAGCT+TGG | + | chr5.2:10018822-10018841 | None:intergenic | 50.0% | |
| ! | CCAAGAGGTACAGCCCAAAA+TGG | + | chr5.2:10018211-10018230 | None:intergenic | 50.0% |
| ! | CCATTTTGGGCTGTACCTCT+TGG | - | chr5.2:10018208-10018227 | MS.gene041124:CDS | 50.0% |
| ! | CTATTCGACTTTGGTGGCTC+TGG | - | chr5.2:10018625-10018644 | MS.gene041124:intron | 50.0% |
| ! | GGACACCAATTTGGCTCCAT+TGG | - | chr5.2:10018720-10018739 | MS.gene041124:intron | 50.0% |
| !! | CCAGAGTAGAGGGCCATTTT+GGG | - | chr5.2:10018195-10018214 | MS.gene041124:CDS | 50.0% |
| ATTTGCGTCGCTCTCACTCG+CGG | + | chr5.2:10018251-10018270 | None:intergenic | 55.0% | |
| CCCAAAATGGCCCTCTACTC+TGG | + | chr5.2:10018198-10018217 | None:intergenic | 55.0% | |
| GTGCCATCTCTACGACCAAG+AGG | + | chr5.2:10018226-10018245 | None:intergenic | 55.0% | |
| ! | CCCAGAGTAGAGGGCCATTT+TGG | - | chr5.2:10018194-10018213 | MS.gene041124:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 10017511 | 10018987 | 10017511 | ID=MS.gene041124 |
| chr5.2 | mRNA | 10017511 | 10018987 | 10017511 | ID=MS.gene041124.t1;Parent=MS.gene041124 |
| chr5.2 | exon | 10018772 | 10018987 | 10018772 | ID=MS.gene041124.t1.exon1;Parent=MS.gene041124.t1 |
| chr5.2 | CDS | 10018772 | 10018987 | 10018772 | ID=cds.MS.gene041124.t1;Parent=MS.gene041124.t1 |
| chr5.2 | exon | 10018441 | 10018632 | 10018441 | ID=MS.gene041124.t1.exon2;Parent=MS.gene041124.t1 |
| chr5.2 | CDS | 10018441 | 10018632 | 10018441 | ID=cds.MS.gene041124.t1;Parent=MS.gene041124.t1 |
| chr5.2 | exon | 10018137 | 10018299 | 10018137 | ID=MS.gene041124.t1.exon3;Parent=MS.gene041124.t1 |
| chr5.2 | CDS | 10018137 | 10018299 | 10018137 | ID=cds.MS.gene041124.t1;Parent=MS.gene041124.t1 |
| chr5.2 | exon | 10017511 | 10017920 | 10017511 | ID=MS.gene041124.t1.exon4;Parent=MS.gene041124.t1 |
| chr5.2 | CDS | 10017511 | 10017920 | 10017511 | ID=cds.MS.gene041124.t1;Parent=MS.gene041124.t1 |
| Gene Sequence |
| Protein sequence |
