AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043562

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043562.t1 MTR_2g093280 98.542 1166 16 1 1 1165 1 1166 0.0 2361
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043562.t1 AT1G29900 82.192 1095 194 1 66 1159 83 1177 0.0 1889

Find 298 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTCAATTGCGATTATT+AGG 0.175440 2.2:-7533562 MS.gene043562:CDS
TAAGTTCTATCAGCGGTTTC+TGG 0.196685 2.2:+7534187 None:intergenic
CTCCTAGCAATTCCTCCTTT+TGG 0.212299 2.2:+7531510 None:intergenic
AAACAAGCTATGAAGAATAT+TGG 0.217288 2.2:-7533962 MS.gene043562:CDS
CGGCCAAACCGCGCTTAATT+TGG 0.219596 2.2:-7534086 MS.gene043562:CDS
TATCAAAATGATTGCTCTTC+AGG 0.220584 2.2:-7530386 MS.gene043562:CDS
CTTGCCATTGCAGCAGAAAT+TGG 0.225301 2.2:-7531474 MS.gene043562:CDS
CCTATTGTGACAACAGTTAA+TGG 0.233763 2.2:-7530454 MS.gene043562:CDS
AGAACTTGTTCGACTAATTC+AGG 0.248152 2.2:+7534148 None:intergenic
TGAGTTAATTGGTGCTAAAT+TGG 0.256074 2.2:-7534020 MS.gene043562:CDS
CTTCATTGTTGATGAACTTC+AGG 0.271493 2.2:-7530362 MS.gene043562:CDS
GTGGAAATGGAGAGTGGTTT+TGG 0.273902 2.2:+7534451 None:intergenic
AGCTGCTAGTTTAACTAATC+AGG 0.277135 2.2:-7533771 MS.gene043562:CDS
GGATGGTCATGTTCGCATTT+GGG 0.278484 2.2:-7531613 MS.gene043562:CDS
GTTGTCTGTTGGATATTCTT+TGG 0.279076 2.2:-7533384 MS.gene043562:CDS
GGATCTGTCATGATTGTTGC+TGG 0.289292 2.2:+7534208 None:intergenic
GGCAGTGGGGCGAACCTTCC+AGG 0.296835 2.2:-7532835 MS.gene043562:CDS
TGTTCGCCCTTCTTATGTTT+TGG 0.298144 2.2:-7531439 MS.gene043562:CDS
TTCATCTGTGTTGTCAATAT+TGG 0.303830 2.2:+7532876 None:intergenic
GGCTCTGAGGAGGATGGCTT+TGG 0.304035 2.2:-7530488 MS.gene043562:CDS
AAATATGGAGTTGAGTTAAT+TGG 0.305515 2.2:-7534031 MS.gene043562:CDS
GGGATGGTCATGTTCGCATT+TGG 0.307207 2.2:-7531614 MS.gene043562:CDS
AGATGAATCCTAGAGTTTCT+AGG 0.309575 2.2:-7533463 MS.gene043562:CDS
CGAGGAATGGGAGAGAAAAT+TGG 0.313742 2.2:+7534526 None:intergenic
ATCCCTTGACCGATTCTATT+TGG 0.320169 2.2:+7532288 None:intergenic
AACAAGCTATGAAGAATATT+GGG 0.325638 2.2:-7533961 MS.gene043562:CDS
GAGAAGGGCGTCGGGGCGTT+CGG 0.332379 2.2:+7534120 None:intergenic
ACTTCGGACTTCTTTCTCAT+TGG 0.335657 2.2:+7532467 None:intergenic
GCATGGATGCGCTCCGGATT+AGG 0.347666 2.2:+7532699 None:intergenic
TGTAGTTATCGGTGGGATAA+TGG 0.349275 2.2:-7531259 MS.gene043562:CDS
TCAATAAGAACAGGGCGTTC+TGG 0.358659 2.2:+7531342 None:intergenic
CAAAACCTTCTTTCTTGTAG+TGG 0.360316 2.2:+7532326 None:intergenic
TCATAAGAGGAGTACATATA+AGG 0.362671 2.2:+7532369 None:intergenic
AACTGTTTCATCTTCTTCCT+TGG 0.363379 2.2:-7531178 MS.gene043562:CDS
GCTTAATTTGGCCGTCGCTT+TGG 0.368653 2.2:-7534074 MS.gene043562:CDS
GGTTGTTGTGTTGGTGGTGG+TGG 0.370541 2.2:+7534397 None:intergenic
TCCTTGACTGACACGTGTTT+AGG 0.371156 2.2:+7530919 None:intergenic
CAAAGGAAACTCAATTTCAT+TGG 0.371921 2.2:+7533883 None:intergenic
GTCTTCTGCTCTTGCTAGTA+AGG 0.376294 2.2:-7533441 MS.gene043562:CDS
ACGCTGGGAGGAACCGGTGG+TGG 0.377866 2.2:-7533842 MS.gene043562:CDS
AGCGGTGCGTTGGAGAAATA+TGG 0.378030 2.2:-7534046 MS.gene043562:CDS
ATGGTCGGGAGAAGGGCGTC+GGG 0.378226 2.2:+7534112 None:intergenic
GGAGTGGAAGTTTGTTGAAA+TGG 0.379187 2.2:+7534557 None:intergenic
TGTTGTGTTGGTGGTGGTGG+TGG 0.381677 2.2:+7534400 None:intergenic
GACTTCTTTCTCATTGGACT+TGG 0.382458 2.2:+7532473 None:intergenic
ATTGCGATTATTAGGGAGAT+TGG 0.384298 2.2:-7533554 MS.gene043562:CDS
TGTTGCGACGGCGGCGGTGG+TGG 0.385534 2.2:+7534432 None:intergenic
TATTGAGAATATTGATCCTA+TGG 0.386336 2.2:-7533660 MS.gene043562:CDS
TAAGAAGGGCGAACAACAAC+CGG 0.387302 2.2:+7531447 None:intergenic
CAGCCTGGAAACTTTGAAAA+AGG 0.389889 2.2:+7530886 None:intergenic
GAATGGGAGGGAAAGATTAG+AGG 0.389900 2.2:+7534498 None:intergenic
GTATAATCGCGAAGATTTGA+TGG 0.391649 2.2:-7533813 MS.gene043562:CDS
CTTCTTCCTTGGAAACAATC+AGG 0.395796 2.2:-7531167 MS.gene043562:CDS
TTAGAGGGAAAGCGAGGAAT+GGG 0.397947 2.2:+7534514 None:intergenic
CCATTAACTGTTGTCACAAT+AGG 0.399078 2.2:+7530454 None:intergenic
TGTTGAGAAGGGAGTGGAAT+GGG 0.399811 2.2:+7534482 None:intergenic
TAACCTCCGGGTTCCTAATC+CGG 0.400577 2.2:-7532712 MS.gene043562:CDS
CTTCAAGCTCTTTATTGCTT+CGG 0.403091 2.2:+7530417 None:intergenic
GGCCAGAAGTTACCACTATC+TGG 0.404326 2.2:-7530766 MS.gene043562:CDS
TTTCAGATTGTTGCTACTGC+TGG 0.406666 2.2:-7530667 MS.gene043562:CDS
TTATTCAATTGCGATTATTA+GGG 0.407138 2.2:-7533561 MS.gene043562:CDS
GGAAGAAGATGAAACAGTTC+TGG 0.410454 2.2:+7531182 None:intergenic
TGTTCAATTTGCTGTTAATC+CGG 0.411291 2.2:-7533510 MS.gene043562:CDS
TGAGTTTGTGGTTGTTGTGT+TGG 0.413365 2.2:+7534388 None:intergenic
TATGCTTCACTTGTCATGTC+TGG 0.413474 2.2:-7530982 MS.gene043562:CDS
TTTGATTGAGAAATCATTGT+TGG 0.413885 2.2:-7533747 MS.gene043562:CDS
TAATCTGTGGATACGGTCTC+GGG 0.416283 2.2:+7531810 None:intergenic
TGGAGAGGATTTGTTGAGAA+GGG 0.420028 2.2:+7534471 None:intergenic
TGATATAAAGTTTACAAAAG+AGG 0.423392 2.2:-7530947 MS.gene043562:CDS
TGTCAATATTGGCTGAGAAC+CGG 0.424326 2.2:+7532887 None:intergenic
TCATACTGGTGATTCGATTA+CGG 0.428772 2.2:-7533633 MS.gene043562:CDS
TTGATGGAGATTTGTAAAGC+TGG 0.429233 2.2:-7533797 MS.gene043562:CDS
AAATACTTGTCAATAAGAAC+AGG 0.430408 2.2:+7531333 None:intergenic
CGGCCAAATTAAGCGCGGTT+TGG 0.432456 2.2:+7534083 None:intergenic
GATGGTATCATCGTACAGTT+TGG 0.434955 2.2:-7531711 MS.gene043562:CDS
GTAATCTGTGGATACGGTCT+CGG 0.435692 2.2:+7531809 None:intergenic
GGTTGTTGCGACGGCGGCGG+TGG 0.437748 2.2:+7534429 None:intergenic
TGAGCCTTCTATTGATTATG+TGG 0.439885 2.2:-7533318 MS.gene043562:CDS
AGCTTCAGCACTAGCACAGC+GGG 0.440226 2.2:+7530613 None:intergenic
CAGTATGCAATAACTCCATC+GGG 0.441045 2.2:-7531090 MS.gene043562:CDS
GATGCACTTGATCGTATAGA+TGG 0.443600 2.2:-7530514 MS.gene043562:CDS
CGGTTTGGCCGCCCATGGTC+GGG 0.444003 2.2:+7534098 None:intergenic
TCCGGTGGATGGTGAGGTTA+TGG 0.444674 2.2:-7533492 MS.gene043562:CDS
GTAACCACATAATCAATAGA+AGG 0.445130 2.2:+7533314 None:intergenic
CCATTTGTATCAAAAGCAAT+TGG 0.445535 2.2:-7531021 MS.gene043562:CDS
GACGGCGGCGGTGGTGGAAA+TGG 0.450210 2.2:+7534438 None:intergenic
GCGGTTTGGCCGCCCATGGT+CGG 0.450442 2.2:+7534097 None:intergenic
GAAATCATTGTTGGGTTGGA+AGG 0.450789 2.2:-7533738 MS.gene043562:CDS
GGCCGCCCATGGTCGGGAGA+AGG 0.453517 2.2:+7534104 None:intergenic
GCGTAGTACTGGTGAGGTCA+TGG 0.456307 2.2:-7530839 MS.gene043562:CDS
GGCGCAGGACCAATCGTTAT+AGG 0.456599 2.2:-7534319 MS.gene043562:CDS
GTCAATATTGGCTGAGAACC+GGG 0.457938 2.2:+7532888 None:intergenic
CGAAGTAGGCGGCTATCTCT+TGG 0.458628 2.2:-7532450 MS.gene043562:CDS
TGATGGAGATTTGTAAAGCT+GGG 0.459388 2.2:-7533796 MS.gene043562:CDS
GCAAATGCAATGTTATATGA+AGG 0.459395 2.2:+7530808 None:intergenic
TTGATTGAGAAATCATTGTT+GGG 0.460734 2.2:-7533746 MS.gene043562:CDS
GCTCTTGCTAGTAAGGCTAC+TGG 0.462424 2.2:-7533434 MS.gene043562:CDS
TTCGCAGCCATCTTCGCTAT+AGG 0.463830 2.2:+7533407 None:intergenic
GGCCACGCTGGATGGGGTTG+TGG 0.464790 2.2:-7532777 MS.gene043562:CDS
GATCCTATGGGTGTTCATAC+TGG 0.465400 2.2:-7533647 MS.gene043562:CDS
GGTTATACTTCAATTGTTCC+CGG 0.468514 2.2:+7532730 None:intergenic
GTTTCCTTTGATTGTTAGAC+CGG 0.468746 2.2:-7533870 MS.gene043562:CDS
TCAGCAACATCAATAGAATC+AGG 0.468822 2.2:+7531582 None:intergenic
CATGGTCGGGAGAAGGGCGT+CGG 0.469059 2.2:+7534111 None:intergenic
TTCACACTCAAAATCATAAG+AGG 0.471299 2.2:+7532356 None:intergenic
GTTTGTGGTTGTTGTGTTGG+TGG 0.472655 2.2:+7534391 None:intergenic
ATTAGAGGGAAAGCGAGGAA+TGG 0.473657 2.2:+7534513 None:intergenic
AGTTCTGGTGGGAATAGAAC+AGG 0.473806 2.2:+7531197 None:intergenic
TACCAGATAGTGGTAACTTC+TGG 0.475438 2.2:+7530764 None:intergenic
GCTAAGGCTCAAATTGCTGC+TGG 0.475911 2.2:-7530787 MS.gene043562:CDS
TAGAACACGGCCACGCTGGA+TGG 0.476128 2.2:-7532785 MS.gene043562:CDS
TCACAAGGCAATGTAGTTAT+CGG 0.476514 2.2:-7531270 MS.gene043562:CDS
CGACCACCCAAAACATAAGA+AGG 0.477178 2.2:+7531432 None:intergenic
GCTGGTGACATGATAGCTAA+TGG 0.478052 2.2:-7530571 MS.gene043562:CDS
AAAACCTTCTTTCTTGTAGT+GGG 0.478098 2.2:+7532327 None:intergenic
GGCTTCAAATTCTGCAGCAC+AGG 0.483459 2.2:+7532398 None:intergenic
AGCGCAGACTTTGACTGATA+AGG 0.484081 2.2:-7533603 MS.gene043562:CDS
AGAACACGGCCACGCTGGAT+GGG 0.484446 2.2:-7532784 MS.gene043562:CDS
ATGGGGTTGTGGAGCGGTGA+AGG 0.484539 2.2:-7532766 MS.gene043562:CDS
CAAAACATCTTCAACAGTCA+AGG 0.488392 2.2:+7531758 None:intergenic
TGAAGGAGTTGGACTATGAC+CGG 0.489940 2.2:-7532749 MS.gene043562:CDS
AGGATTTGTTGAGAAGGGAG+TGG 0.492034 2.2:+7534476 None:intergenic
CCATGACCTGATTGTTTCCA+AGG 0.492568 2.2:+7531161 None:intergenic
ATGGTTTCTGAGGCAGTTGA+AGG 0.492737 2.2:-7532610 MS.gene043562:CDS
ACTTGATCGTATAGATGGTC+TGG 0.493177 2.2:-7530509 MS.gene043562:CDS
TGGTGCGGCGGTTGTTGCGA+CGG 0.493929 2.2:+7534420 None:intergenic
TGTGGTTGTTGTGTTGGTGG+TGG 0.494089 2.2:+7534394 None:intergenic
TTCGACTAATTCAGGAGTCA+TGG 0.494460 2.2:+7534156 None:intergenic
CGCTGGGAGGAACCGGTGGT+GGG 0.496942 2.2:-7533841 MS.gene043562:CDS
CCACCTCAACAGCAGTTTCA+AGG 0.497201 2.2:+7531367 None:intergenic
GGAGTACATATAAGGAGTAT+TGG 0.497655 2.2:+7532377 None:intergenic
GCCGCCCATGGTCGGGAGAA+GGG 0.497923 2.2:+7534105 None:intergenic
TTGGTCCTGCGCCGAGGATG+AGG 0.498563 2.2:+7534329 None:intergenic
GAGTGGAAGTTTGTTGAAAT+GGG 0.498648 2.2:+7534558 None:intergenic
CGACGCCCTTCTCCCGACCA+TGG 0.498967 2.2:-7534110 MS.gene043562:CDS
TTCAAGCCAGCATGTGCCAG+TGG 0.499793 2.2:-7531636 MS.gene043562:CDS
AACAATTGAAGTATAACCTC+CGG 0.499890 2.2:-7532725 MS.gene043562:CDS
ATATAACATTGCATTTGCTA+AGG 0.501943 2.2:-7530803 MS.gene043562:CDS
GGCGGTTGTTGCGACGGCGG+CGG 0.502006 2.2:+7534426 None:intergenic
ATGCTGGCTTGAATTCATCT+AGG 0.504036 2.2:+7531646 None:intergenic
GACGCCCTTCTCCCGACCAT+GGG 0.504383 2.2:-7534109 MS.gene043562:CDS
AGTCCTGAGATGCGTAGTAC+TGG 0.506073 2.2:-7530850 MS.gene043562:CDS
ATGGAGCACATTGAACAGGC+TGG 0.506369 2.2:-7531240 MS.gene043562:CDS
GAGGATGGCTTTGGATTACA+AGG 0.506425 2.2:-7530479 MS.gene043562:CDS
CCAGCATGTGCCAGTGGGGA+TGG 0.507513 2.2:-7531630 MS.gene043562:CDS
GACAGATCTCGATTTCTATG+AGG 0.508946 2.2:-7532538 MS.gene043562:CDS
GAACAGGCTGGGATACATTC+CGG 0.509123 2.2:-7531228 MS.gene043562:CDS
CCATCCCCACTGGCACATGC+TGG 0.510340 2.2:+7531630 None:intergenic
TCACCAGTACTACGCATCTC+AGG 0.510948 2.2:+7530847 None:intergenic
GAAATCAGTTGGAGAGTCAA+TGG 0.511421 2.2:-7532856 MS.gene043562:CDS
GATAATGGAGCACATTGAAC+AGG 0.513380 2.2:-7531244 MS.gene043562:CDS
TGGATTTCCTATAGCGAAGA+TGG 0.515248 2.2:-7533414 MS.gene043562:CDS
TTGGAGAGGATTTGTTGAGA+AGG 0.516295 2.2:+7534470 None:intergenic
TTGTGGAGCGGTGAAGGAGT+TGG 0.517524 2.2:-7532760 MS.gene043562:CDS
TGAACATTATTGATTTGGAA+AGG 0.518572 2.2:-7531737 MS.gene043562:CDS
TTGAGTTTATGAGAATAACT+TGG 0.519945 2.2:+7534233 None:intergenic
GAGAGAAAATTGGAGAGGAA+TGG 0.520552 2.2:+7534536 None:intergenic
ATAACGAACCTGGAGAGAAA+AGG 0.521879 2.2:+7532236 None:intergenic
TTATCAGTCAAAGTCTGCGC+TGG 0.523995 2.2:+7533605 None:intergenic
GTATCAACTCGCTTATATGC+TGG 0.524359 2.2:+7532420 None:intergenic
TCGTTAAGTCATTCAAGCTA+AGG 0.527720 2.2:+7530734 None:intergenic
TTGAGAAATCATTGTTGGGT+TGG 0.529330 2.2:-7533742 MS.gene043562:CDS
ATTGAGAATATTGATCCTAT+GGG 0.531129 2.2:-7533659 MS.gene043562:CDS
AGCTCCCACTACAAGAAAGA+AGG 0.532140 2.2:-7532331 MS.gene043562:CDS
TGAGATTGATATTGATGCGC+TGG 0.532440 2.2:-7531298 MS.gene043562:CDS
CGCTGGATGGGGTTGTGGAG+CGG 0.533647 2.2:-7532772 MS.gene043562:CDS
CCACAAACTCAACCAAAACA+CGG 0.534377 2.2:-7534376 MS.gene043562:CDS
AAACCCCTTCACAATGTCAA+TGG 0.534564 2.2:-7534593 None:intergenic
TGCGCTCCGGATTAGGAACC+CGG 0.534748 2.2:+7532706 None:intergenic
AAGATCCTCATCCTCGGCGC+AGG 0.536017 2.2:-7534334 MS.gene043562:CDS
AGGGAGATTGGTGTTGAGTG+TGG 0.536375 2.2:-7533542 MS.gene043562:CDS
TCAGTATGCAATAACTCCAT+CGG 0.538810 2.2:-7531091 MS.gene043562:CDS
TGCAAAGCATTACGCGAAGA+AGG 0.539104 2.2:-7534259 MS.gene043562:CDS
ATAGAAGGCTCAAAACTAGC+AGG 0.542135 2.2:+7533329 None:intergenic
CAAGAGATAGCCGCCTACTT+CGG 0.542167 2.2:+7532451 None:intergenic
TGAGAAGGGAGTGGAATGGG+AGG 0.542409 2.2:+7534485 None:intergenic
AGTTGGAGAGTCAATGGCAG+TGG 0.544402 2.2:-7532850 MS.gene043562:CDS
CTACAGATTGAACACCCAAA+AGG 0.545240 2.2:-7531525 MS.gene043562:CDS
GTATCCAATTTCTGCTGCAA+TGG 0.545810 2.2:+7531470 None:intergenic
GCCCTTCTCCCGACCATGGG+CGG 0.546598 2.2:-7534106 MS.gene043562:CDS
GACAACAGTTAATGGTGCTC+TGG 0.547025 2.2:-7530446 MS.gene043562:CDS
CGCATCAATATCAATCTCAC+AGG 0.547083 2.2:+7531302 None:intergenic
TGCAGCAGAAATTGGATACC+CGG 0.548701 2.2:-7531466 MS.gene043562:CDS
AAAAGCAATTGGCCACCCCT+TGG 0.548968 2.2:-7531010 MS.gene043562:CDS
CGTAGTACTGGTGAGGTCAT+GGG 0.549210 2.2:-7530838 MS.gene043562:CDS
AATAGAACAGGCAGAGTCAC+CGG 0.550789 2.2:+7531209 None:intergenic
GCAGAAGACCTAGAAACTCT+AGG 0.551044 2.2:+7533455 None:intergenic
TTTGGCTGAGAGCGGTGCGT+TGG 0.551101 2.2:-7534056 MS.gene043562:CDS
AACTGTACGATGATACCATC+AGG 0.552076 2.2:+7531714 None:intergenic
TATTGATTATGTGGTTACAA+AGG 0.552229 2.2:-7533309 MS.gene043562:intron
TATACAGCATGGATGCGCTC+CGG 0.553067 2.2:+7532693 None:intergenic
CGAGATCTGTCAAATCAGAC+AGG 0.554187 2.2:+7532550 None:intergenic
AAGCGCGGTTTGGCCGCCCA+TGG 0.554235 2.2:+7534093 None:intergenic
TGGTCTGGCTCTGAGGAGGA+TGG 0.554545 2.2:-7530494 MS.gene043562:CDS
GGTGGAGGACCAAATAGAAT+CGG 0.554915 2.2:-7532297 MS.gene043562:CDS
AGGAACACACTACCAGATAG+TGG 0.556241 2.2:+7530754 None:intergenic
TTTACGCTGGGAGGAACCGG+TGG 0.557633 2.2:-7533845 MS.gene043562:CDS
CATGCTTGACCTATAACGAT+TGG 0.558927 2.2:+7534310 None:intergenic
AAAACATCTTCAACAGTCAA+GGG 0.559743 2.2:+7531759 None:intergenic
GTATATGCTGCAATGAAGAA+AGG 0.560232 2.2:-7532675 MS.gene043562:CDS
TTCGCAATCTTCTCAAGGTG+AGG 0.561095 2.2:+7530709 None:intergenic
TTGTTGAGAAGGGAGTGGAA+TGG 0.562419 2.2:+7534481 None:intergenic
AGAGGGAGAGCTAGTTTCAG+TGG 0.565705 2.2:+7531678 None:intergenic
AGTGTCGTAATCTGTGGATA+CGG 0.566122 2.2:+7531803 None:intergenic
GAACACGGCCACGCTGGATG+GGG 0.566643 2.2:-7532783 MS.gene043562:CDS
GTTGGAGAGTCAATGGCAGT+GGG 0.567131 2.2:-7532849 MS.gene043562:CDS
AAGTTTGTTGAAATGGGTGA+TGG 0.568332 2.2:+7534564 None:intergenic
CCTTGAAACTGCTGTTGAGG+TGG 0.569088 2.2:-7531367 MS.gene043562:CDS
ATGAGAAAGAAGTCCGAAGT+AGG 0.570638 2.2:-7532464 MS.gene043562:CDS
TCATCTAGGTATCGTTGTAG+AGG 0.571545 2.2:+7531660 None:intergenic
TCCTAAACACGTGTCAGTCA+AGG 0.572098 2.2:-7530920 MS.gene043562:CDS
TATATGCTGCAATGAAGAAA+GGG 0.573576 2.2:-7532674 MS.gene043562:CDS
CAAGGCAATGTAGTTATCGG+TGG 0.573816 2.2:-7531267 MS.gene043562:CDS
ACAACACAGATGAAATCAGT+TGG 0.575107 2.2:-7532867 MS.gene043562:CDS
GATGGTCATGTTCGCATTTG+GGG 0.576194 2.2:-7531612 MS.gene043562:CDS
AAAGCCGGTCTAACAATCAA+AGG 0.576381 2.2:+7533866 None:intergenic
CTTAGAAAGATGTCACAGCC+TGG 0.576790 2.2:+7530871 None:intergenic
TCGACTAATTCAGGAGTCAT+GGG 0.577794 2.2:+7534157 None:intergenic
ACCGCTCTCAGCCAAAGCGA+CGG 0.578342 2.2:+7534063 None:intergenic
GTTCCTCCCAGCGTAAAAGC+CGG 0.578793 2.2:+7533851 None:intergenic
AAAATTGGAGAGGAATGGAG+TGG 0.579166 2.2:+7534541 None:intergenic
CAAATGCAATGTTATATGAA+GGG 0.579235 2.2:+7530809 None:intergenic
TGGAGCACATTGAACAGGCT+GGG 0.579620 2.2:-7531239 MS.gene043562:CDS
GCGAACATGACCATCCCCAC+TGG 0.579895 2.2:+7531620 None:intergenic
GGTATCATCGTACAGTTTGG+AGG 0.584221 2.2:-7531708 MS.gene043562:CDS
GCCGTCGCTTTGGCTGAGAG+CGG 0.584273 2.2:-7534064 MS.gene043562:CDS
TAATGGAGACATTCAGCTGA+TGG 0.584692 2.2:-7530554 MS.gene043562:CDS
CCTTGGAAACAATCAGGTCA+TGG 0.585196 2.2:-7531161 MS.gene043562:CDS
AGAAGATGAAACAGTTCTGG+TGG 0.585872 2.2:+7531185 None:intergenic
TCAAGCCAGCATGTGCCAGT+GGG 0.587571 2.2:-7531635 MS.gene043562:CDS
GTATAGATGGTCTGGCTCTG+AGG 0.588072 2.2:-7530501 MS.gene043562:CDS
CATCTAGGTATCGTTGTAGA+GGG 0.588113 2.2:+7531661 None:intergenic
ATTGATTTGGAAAGGCCTGA+TGG 0.588713 2.2:-7531729 MS.gene043562:CDS
TAACGATTGGTCCTGCGCCG+AGG 0.589932 2.2:+7534323 None:intergenic
AAGAAGGGCGAACAACAACC+GGG 0.593391 2.2:+7531448 None:intergenic
CATGAAGGAAGGCCTCATGC+TGG 0.594472 2.2:-7530589 MS.gene043562:CDS
ATGGCTGCGAAGTTGTCTGT+TGG 0.597318 2.2:-7533395 MS.gene043562:CDS
TCATTGCAGCATATACAGCA+TGG 0.597950 2.2:+7532682 None:intergenic
TGCTGAAGCTACATGAAGGA+AGG 0.598243 2.2:-7530600 MS.gene043562:CDS
TGCGGCGGTTGTTGCGACGG+CGG 0.599638 2.2:+7534423 None:intergenic
AAGTGAAGCATATTTAGCCA+AGG 0.600008 2.2:+7530993 None:intergenic
ACCATAACCTCACCATCCAC+CGG 0.602326 2.2:+7533491 None:intergenic
GAAAGATTAGAGGGAAAGCG+AGG 0.602505 2.2:+7534508 None:intergenic
TTGGAAGGAATATGAGCTTG+AGG 0.603231 2.2:-7533723 MS.gene043562:CDS
ATCACTAGTGTCGTAATCTG+TGG 0.603233 2.2:+7531797 None:intergenic
GAGATTGGTGTTGAGTGTGG+TGG 0.606034 2.2:-7533539 MS.gene043562:CDS
AAGCCTTCGCAATCTTCTCA+AGG 0.608346 2.2:+7530704 None:intergenic
GGACCAAATAGAATCGGTCA+AGG 0.609020 2.2:-7532291 MS.gene043562:CDS
ACAATTGAAGTATAACCTCC+GGG 0.609810 2.2:-7532724 MS.gene043562:CDS
AATGGGAGGGAAAGATTAGA+GGG 0.611717 2.2:+7534499 None:intergenic
GAGAAGGGAGTGGAATGGGA+GGG 0.613081 2.2:+7534486 None:intergenic
AGCAGGATATGAGACAATCA+TGG 0.614648 2.2:-7531844 MS.gene043562:CDS
TCACCTTGAGAAGATTGCGA+AGG 0.620682 2.2:-7530707 MS.gene043562:CDS
TCTCTAGAACACGGCCACGC+TGG 0.621158 2.2:-7532789 MS.gene043562:CDS
TACAAATGGCACGGTACGAG+AGG 0.621469 2.2:+7531035 None:intergenic
GATGCGCTGGCTGACTCACA+AGG 0.624372 2.2:-7531285 MS.gene043562:CDS
AAGGCAATGTAGTTATCGGT+GGG 0.624695 2.2:-7531266 MS.gene043562:CDS
GCGGTGGTGGAAATGGAGAG+TGG 0.625154 2.2:+7534445 None:intergenic
ACCCAAAAGGAGGAATTGCT+AGG 0.625507 2.2:-7531512 MS.gene043562:CDS
AGTGAAGCATATTTAGCCAA+GGG 0.625941 2.2:+7530994 None:intergenic
GGCACGGTACGAGAGGCTCG+AGG 0.630809 2.2:+7531042 None:intergenic
TTTGCTGTTAATCCGGTGGA+TGG 0.632908 2.2:-7533503 MS.gene043562:CDS
CAGATTGAACACCCAAAAGG+AGG 0.633462 2.2:-7531522 MS.gene043562:CDS
TCACCAGTATGAACACCCAT+AGG 0.634172 2.2:+7533644 None:intergenic
TTATTGATAGATGGTTTCTG+AGG 0.635908 2.2:-7532620 MS.gene043562:CDS
AATGGGAGAGAAAATTGGAG+AGG 0.636157 2.2:+7534531 None:intergenic
TGGTCGGGAGAAGGGCGTCG+GGG 0.640007 2.2:+7534113 None:intergenic
GCATGCGAATTCGATTACTC+AGG 0.640010 2.2:-7534292 MS.gene043562:CDS
ATTATACGCAATCCCACCAC+CGG 0.641135 2.2:+7533829 None:intergenic
GACCACCCAAAACATAAGAA+GGG 0.643469 2.2:+7531433 None:intergenic
TAGATGGTCTGGCTCTGAGG+AGG 0.646311 2.2:-7530498 MS.gene043562:CDS
GCACGGTACGAGAGGCTCGA+GGG 0.647096 2.2:+7531043 None:intergenic
ATGTTGCTGAAGACAGAGAG+AGG 0.649274 2.2:-7531569 MS.gene043562:CDS
GAAGATGAAACAGTTCTGGT+GGG 0.651907 2.2:+7531186 None:intergenic
ATACCTTGAAACTGCTGTTG+AGG 0.651957 2.2:-7531370 MS.gene043562:CDS
TCAATTTGCTGTTAATCCGG+TGG 0.652369 2.2:-7533507 MS.gene043562:CDS
AAGCATATTTAGCCAAGGGG+TGG 0.655154 2.2:+7530998 None:intergenic
TGTTAATCCGGTGGATGGTG+AGG 0.655243 2.2:-7533498 MS.gene043562:CDS
GACCAAATAGAATCGGTCAA+GGG 0.655910 2.2:-7532290 MS.gene043562:CDS
GCTATCATGTCACCAGCATG+AGG 0.656100 2.2:+7530577 None:intergenic
AGAAAGAAGTCCGAAGTAGG+CGG 0.656160 2.2:-7532461 MS.gene043562:CDS
GAAGGAGTTGGACTATGACC+GGG 0.657634 2.2:-7532748 MS.gene043562:CDS
TGAGATGCGTAGTACTGGTG+AGG 0.661449 2.2:-7530845 MS.gene043562:CDS
CAAGCCAGCATGTGCCAGTG+GGG 0.676593 2.2:-7531634 MS.gene043562:CDS
AGCGACGGCCAAATTAAGCG+CGG 0.681349 2.2:+7534078 None:intergenic
TGTGATATAAGTTCTATCAG+CGG 0.682319 2.2:+7534180 None:intergenic
AATGTACTACAAGTACCAGA+AGG 0.693558 2.2:+7533926 None:intergenic
GCTGTTCGCTCTCTAGAACA+CGG 0.696408 2.2:-7532798 MS.gene043562:CDS
GTGAAGCATATTTAGCCAAG+GGG 0.696786 2.2:+7530995 None:intergenic
CTCCACAACCCCATCCAGCG+TGG 0.701482 2.2:+7532775 None:intergenic
CTAGTGCTGAAGCTACATGA+AGG 0.708914 2.2:-7530604 MS.gene043562:CDS
GTACTACAAGTACCAGAAGG+TGG 0.710212 2.2:+7533929 None:intergenic
TTGGAGAGTCAATGGCAGTG+GGG 0.725290 2.2:-7532848 MS.gene043562:CDS
AATACTTGTCAATAAGAACA+GGG 0.727740 2.2:+7531334 None:intergenic
TAGCTTCAGCACTAGCACAG+CGG 0.731809 2.2:+7530612 None:intergenic
GCTCCGGATTAGGAACCCGG+AGG 0.772534 2.2:+7532709 None:intergenic
GCTTCAGCACTAGCACAGCG+GGG 0.774049 2.2:+7530614 None:intergenic
AGTATGCAATAACTCCATCG+GGG 0.784298 2.2:-7531089 MS.gene043562:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAAATATCAATTTCA+AGG + chr2.2:7531800-7531819 None:intergenic 15.0%
!! AATAAAATATACGATTTATC+AGG + chr2.2:7533021-7533040 None:intergenic 15.0%
!! TATTATGTTCATTTGTTTAT+TGG + chr2.2:7532802-7532821 None:intergenic 15.0%
!!! ATAAACTAATTTTTATGCTA+TGG - chr2.2:7531892-7531911 MS.gene043562:intron 15.0%
!!! ATTTGATGTTTTTCAATATA+AGG + chr2.2:7531768-7531787 None:intergenic 15.0%
!!! TTTGATGTTTTTCAATATAA+GGG + chr2.2:7531767-7531786 None:intergenic 15.0%
!! ATTATTCAATTGCGATTATT+AGG - chr2.2:7531375-7531394 MS.gene043562:CDS 20.0%
!! TGATATAAAGTTTACAAAAG+AGG - chr2.2:7533990-7534009 MS.gene043562:CDS 20.0%
!! TTATTCAATTGCGATTATTA+GGG - chr2.2:7531376-7531395 MS.gene043562:CDS 20.0%
!!! GTCTTTTTAGTTATATCATT+CGG + chr2.2:7531587-7531606 None:intergenic 20.0%
!!! TGTTTTGAACATTATTGATT+TGG - chr2.2:7533195-7533214 MS.gene043562:intron 20.0%
! AAACAAGCTATGAAGAATAT+TGG - chr2.2:7530975-7530994 MS.gene043562:CDS 25.0%
! AAATACTTGTCAATAAGAAC+AGG + chr2.2:7533607-7533626 None:intergenic 25.0%
! AAATATGGAGTTGAGTTAAT+TGG - chr2.2:7530906-7530925 MS.gene043562:CDS 25.0%
! AACAAGCTATGAAGAATATT+GGG - chr2.2:7530976-7530995 MS.gene043562:CDS 25.0%
! AATACTTGTCAATAAGAACA+GGG + chr2.2:7533606-7533625 None:intergenic 25.0%
! ATTGAGAATATTGATCCTAT+GGG - chr2.2:7531278-7531297 MS.gene043562:CDS 25.0%
! CAAATGCAATGTTATATGAA+GGG + chr2.2:7534131-7534150 None:intergenic 25.0%
! TATTGAGAATATTGATCCTA+TGG - chr2.2:7531277-7531296 MS.gene043562:CDS 25.0%
! TGGAATCTAGTTAATAGAAA+GGG + chr2.2:7532731-7532750 None:intergenic 25.0%
! TTGAGTTTATGAGAATAACT+TGG + chr2.2:7530707-7530726 None:intergenic 25.0%
! TTGATTGAGAAATCATTGTT+GGG - chr2.2:7531191-7531210 MS.gene043562:CDS 25.0%
! TTTGATTGAGAAATCATTGT+TGG - chr2.2:7531190-7531209 MS.gene043562:CDS 25.0%
!! ATATAACATTGCATTTGCTA+AGG - chr2.2:7534134-7534153 MS.gene043562:CDS 25.0%
!! TATTGATTATGTGGTTACAA+AGG - chr2.2:7531628-7531647 MS.gene043562:CDS 25.0%
!!! AAGAAAGAAGGTTTTGATTT+TGG - chr2.2:7532618-7532637 MS.gene043562:CDS 25.0%
!!! AGAAAGAAGGTTTTGATTTT+GGG - chr2.2:7532619-7532638 MS.gene043562:CDS 25.0%
!!! AGCAATCATTTTGATAGAAT+TGG + chr2.2:7534547-7534566 None:intergenic 25.0%
!!! TGAACATTATTGATTTGGAA+AGG - chr2.2:7533200-7533219 MS.gene043562:intron 25.0%
!!! TTTGCTTTTGAAAAATTTCC+CGG - chr2.2:7532031-7532050 MS.gene043562:intron 25.0%
AAAACATCTTCAACAGTCAA+GGG + chr2.2:7533181-7533200 None:intergenic 30.0%
AAAACCTTCTTTCTTGTAGT+GGG + chr2.2:7532613-7532632 None:intergenic 30.0%
AACAATTGAAGTATAACCTC+CGG - chr2.2:7532212-7532231 MS.gene043562:intron 30.0%
ACAAATAAACACACAACTAG+TGG + chr2.2:7532774-7532793 None:intergenic 30.0%
ACATTGCACTTTGAGTAAAT+AGG - chr2.2:7531701-7531720 MS.gene043562:CDS 30.0%
ACTAGTTGTGTGTTTATTTG+TGG - chr2.2:7532773-7532792 MS.gene043562:CDS 30.0%
AGCATGAATACTTGAATATC+TGG + chr2.2:7532751-7532770 None:intergenic 30.0%
ATAAAAAAGATCCTCATCCT+CGG - chr2.2:7530597-7530616 MS.gene043562:CDS 30.0%
CAAAGGAAACTCAATTTCAT+TGG + chr2.2:7531057-7531076 None:intergenic 30.0%
CCATTTGTATCAAAAGCAAT+TGG - chr2.2:7533916-7533935 MS.gene043562:CDS 30.0%
CTGGAATCTAGTTAATAGAA+AGG + chr2.2:7532732-7532751 None:intergenic 30.0%
GCAAATGCAATGTTATATGA+AGG + chr2.2:7534132-7534151 None:intergenic 30.0%
GTAACCACATAATCAATAGA+AGG + chr2.2:7531626-7531645 None:intergenic 30.0%
TATATGCTGCAATGAAGAAA+GGG - chr2.2:7532263-7532282 MS.gene043562:CDS 30.0%
TATCAAAATGATTGCTCTTC+AGG - chr2.2:7534551-7534570 MS.gene043562:CDS 30.0%
TGTGATATAAGTTCTATCAG+CGG + chr2.2:7530760-7530779 None:intergenic 30.0%
TTATTGATAGATGGTTTCTG+AGG - chr2.2:7532317-7532336 MS.gene043562:CDS 30.0%
TTCACACTCAAAATCATAAG+AGG + chr2.2:7532584-7532603 None:intergenic 30.0%
TTCATCTGTGTTGTCAATAT+TGG + chr2.2:7532064-7532083 None:intergenic 30.0%
TTCTATGAGGTAAAAAGAAG+AGG - chr2.2:7532412-7532431 MS.gene043562:CDS 30.0%
! TCATAAGAGGAGTACATATA+AGG + chr2.2:7532571-7532590 None:intergenic 30.0%
!! AATTTTTCAAAAGCAAACCG+AGG + chr2.2:7532028-7532047 None:intergenic 30.0%
!! CCAATTGCTTTTGATACAAA+TGG + chr2.2:7533919-7533938 None:intergenic 30.0%
!! TGAGTTAATTGGTGCTAAAT+TGG - chr2.2:7530917-7530936 MS.gene043562:CDS 30.0%
!! TGTTCAATTTGCTGTTAATC+CGG - chr2.2:7531427-7531446 MS.gene043562:CDS 30.0%
!! TTTAGTTCTTGAAATCGCAA+GGG - chr2.2:7531727-7531746 MS.gene043562:CDS 30.0%
!!! AGCTGAGTTTTATTGATAGA+TGG - chr2.2:7532308-7532327 MS.gene043562:CDS 30.0%
!!! GATGAGGATCTTTTTTATGT+CGG + chr2.2:7530595-7530614 None:intergenic 30.0%
!!! TTTTAGTTCTTGAAATCGCA+AGG - chr2.2:7531726-7531745 MS.gene043562:CDS 30.0%
!!! TTTTGTGCTTCAAGTTGAAT+AGG - chr2.2:7532966-7532985 MS.gene043562:intron 30.0%
AACTGTTTCATCTTCTTCCT+TGG - chr2.2:7533759-7533778 MS.gene043562:CDS 35.0%
AAGTGAAGCATATTTAGCCA+AGG + chr2.2:7533947-7533966 None:intergenic 35.0%
AATGTACTACAAGTACCAGA+AGG + chr2.2:7531014-7531033 None:intergenic 35.0%
ACAACACAGATGAAATCAGT+TGG - chr2.2:7532070-7532089 MS.gene043562:intron 35.0%
ACAATTGAAGTATAACCTCC+GGG - chr2.2:7532213-7532232 MS.gene043562:intron 35.0%
AGATGAATCCTAGAGTTTCT+AGG - chr2.2:7531474-7531493 MS.gene043562:CDS 35.0%
AGTACATAGCACTAAACTGA+TGG + chr2.2:7532918-7532937 None:intergenic 35.0%
AGTGAAGCATATTTAGCCAA+GGG + chr2.2:7533946-7533965 None:intergenic 35.0%
ATCACTGAAAGCTAAAGTCA+TGG + chr2.2:7532865-7532884 None:intergenic 35.0%
ATTGCGATTATTAGGGAGAT+TGG - chr2.2:7531383-7531402 MS.gene043562:CDS 35.0%
ATTGGCCAAAAAACTGAATG+TGG - chr2.2:7533807-7533826 MS.gene043562:CDS 35.0%
CAAAACATCTTCAACAGTCA+AGG + chr2.2:7533182-7533201 None:intergenic 35.0%
CAAAACCTTCTTTCTTGTAG+TGG + chr2.2:7532614-7532633 None:intergenic 35.0%
CCAAAAAACTGAATGTGGTT+GGG - chr2.2:7533812-7533831 MS.gene043562:CDS 35.0%
CCATTAACTGTTGTCACAAT+AGG + chr2.2:7534486-7534505 None:intergenic 35.0%
CCTATTGTGACAACAGTTAA+TGG - chr2.2:7534483-7534502 MS.gene043562:CDS 35.0%
CTTCAAGCTCTTTATTGCTT+CGG + chr2.2:7534523-7534542 None:intergenic 35.0%
GGTTATACTTCAATTGTTCC+CGG + chr2.2:7532210-7532229 None:intergenic 35.0%
GTATAATCGCGAAGATTTGA+TGG - chr2.2:7531124-7531143 MS.gene043562:CDS 35.0%
GTATATGCTGCAATGAAGAA+AGG - chr2.2:7532262-7532281 MS.gene043562:CDS 35.0%
GTTGTCTGTTGGATATTCTT+TGG - chr2.2:7531553-7531572 MS.gene043562:CDS 35.0%
GTTTCCTTTGATTGTTAGAC+CGG - chr2.2:7531067-7531086 MS.gene043562:CDS 35.0%
TCACAAGGCAATGTAGTTAT+CGG - chr2.2:7533667-7533686 MS.gene043562:CDS 35.0%
TCAGCAACATCAATAGAATC+AGG + chr2.2:7533358-7533377 None:intergenic 35.0%
TCAGTATGCAATAACTCCAT+CGG - chr2.2:7533846-7533865 MS.gene043562:CDS 35.0%
TCATACTGGTGATTCGATTA+CGG - chr2.2:7531304-7531323 MS.gene043562:CDS 35.0%
TCGTTAAGTCATTCAAGCTA+AGG + chr2.2:7534206-7534225 None:intergenic 35.0%
TGATGGAGATTTGTAAAGCT+GGG - chr2.2:7531141-7531160 MS.gene043562:CDS 35.0%
TTGAGAAATCATTGTTGGGT+TGG - chr2.2:7531195-7531214 MS.gene043562:CDS 35.0%
TTGATGGAGATTTGTAAAGC+TGG - chr2.2:7531140-7531159 MS.gene043562:CDS 35.0%
! AGAACTTGTTCGACTAATTC+AGG + chr2.2:7530792-7530811 None:intergenic 35.0%
! AGCTGCTAGTTTAACTAATC+AGG - chr2.2:7531166-7531185 MS.gene043562:CDS 35.0%
! CTTCATTGTTGATGAACTTC+AGG - chr2.2:7534575-7534594 MS.gene043562:CDS 35.0%
! GGAGTACATATAAGGAGTAT+TGG + chr2.2:7532563-7532582 None:intergenic 35.0%
! TGAGCCTTCTATTGATTATG+TGG - chr2.2:7531619-7531638 MS.gene043562:CDS 35.0%
! TGCTTTTGATACAAATGGCA+CGG + chr2.2:7533914-7533933 None:intergenic 35.0%
!! AAGTTTGTTGAAATGGGTGA+TGG + chr2.2:7530376-7530395 None:intergenic 35.0%
!! GAGTGGAAGTTTGTTGAAAT+GGG + chr2.2:7530382-7530401 None:intergenic 35.0%
!! TGTGACTGCATATGTCATTT+TGG - chr2.2:7531846-7531865 MS.gene043562:CDS 35.0%
!! TTTTTGAAAAGACTCCTGGA+AGG + chr2.2:7532119-7532138 None:intergenic 35.0%
!!! AAGAAGGTTTTGATTTTGGG+TGG - chr2.2:7532622-7532641 MS.gene043562:CDS 35.0%
!!! CTTCCTTTTTCAAAGTTTCC+AGG - chr2.2:7534048-7534067 MS.gene043562:CDS 35.0%
!!! TTTTTGACTTGCAGATTCCT+CGG - chr2.2:7532008-7532027 MS.gene043562:intron 35.0%
AAAATTGGAGAGGAATGGAG+TGG + chr2.2:7530399-7530418 None:intergenic 40.0%
AAAGCCGGTCTAACAATCAA+AGG + chr2.2:7531074-7531093 None:intergenic 40.0%
AAAGGGAAAGATAACGAACC+TGG + chr2.2:7532714-7532733 None:intergenic 40.0%
AACTGTACGATGATACCATC+AGG + chr2.2:7533226-7533245 None:intergenic 40.0%
AAGGCAATGTAGTTATCGGT+GGG - chr2.2:7533671-7533690 MS.gene043562:CDS 40.0%
AATGGGAGAGAAAATTGGAG+AGG + chr2.2:7530409-7530428 None:intergenic 40.0%
AATGGGAGGGAAAGATTAGA+GGG + chr2.2:7530441-7530460 None:intergenic 40.0%
ACTTCGGACTTCTTTCTCAT+TGG + chr2.2:7532473-7532492 None:intergenic 40.0%
ACTTGATCGTATAGATGGTC+TGG - chr2.2:7534428-7534447 MS.gene043562:CDS 40.0%
AGCAAAAATACATTCCCCGA+TGG + chr2.2:7533865-7533884 None:intergenic 40.0%
AGCAGGATATGAGACAATCA+TGG - chr2.2:7533093-7533112 MS.gene043562:intron 40.0%
AGTATGCAATAACTCCATCG+GGG - chr2.2:7533848-7533867 MS.gene043562:CDS 40.0%
AGTGTCGTAATCTGTGGATA+CGG + chr2.2:7533137-7533156 None:intergenic 40.0%
ATAACGAACCTGGAGAGAAA+AGG + chr2.2:7532704-7532723 None:intergenic 40.0%
ATACCTTGAAACTGCTGTTG+AGG - chr2.2:7533567-7533586 MS.gene043562:CDS 40.0%
ATAGAAGGCTCAAAACTAGC+AGG + chr2.2:7531611-7531630 None:intergenic 40.0%
ATCACTAGTGTCGTAATCTG+TGG + chr2.2:7533143-7533162 None:intergenic 40.0%
ATCTCGCTCATCTCGATATT+TGG - chr2.2:7532995-7533014 MS.gene043562:intron 40.0%
ATGAGAAAGAAGTCCGAAGT+AGG - chr2.2:7532473-7532492 MS.gene043562:CDS 40.0%
CAGTATGCAATAACTCCATC+GGG - chr2.2:7533847-7533866 MS.gene043562:CDS 40.0%
CATGCTTGACCTATAACGAT+TGG + chr2.2:7530630-7530649 None:intergenic 40.0%
CCACAAACTCAACCAAAACA+CGG - chr2.2:7530561-7530580 MS.gene043562:CDS 40.0%
CGCATCAATATCAATCTCAC+AGG + chr2.2:7533638-7533657 None:intergenic 40.0%
CTACAGATTGAACACCCAAA+AGG - chr2.2:7533412-7533431 MS.gene043562:CDS 40.0%
CTGAAAGCTAAAGTCATGGT+AGG + chr2.2:7532861-7532880 None:intergenic 40.0%
CTTCTTCCTTGGAAACAATC+AGG - chr2.2:7533770-7533789 MS.gene043562:CDS 40.0%
GAAATCAGTTGGAGAGTCAA+TGG - chr2.2:7532081-7532100 MS.gene043562:intron 40.0%
GACAGATCTCGATTTCTATG+AGG - chr2.2:7532399-7532418 MS.gene043562:CDS 40.0%
GACCAAATAGAATCGGTCAA+GGG - chr2.2:7532647-7532666 MS.gene043562:CDS 40.0%
GACCACCCAAAACATAAGAA+GGG + chr2.2:7533507-7533526 None:intergenic 40.0%
GACTTCTTTCTCATTGGACT+TGG + chr2.2:7532467-7532486 None:intergenic 40.0%
GAGAGAAAATTGGAGAGGAA+TGG + chr2.2:7530404-7530423 None:intergenic 40.0%
GATGCACTTGATCGTATAGA+TGG - chr2.2:7534423-7534442 MS.gene043562:CDS 40.0%
GATGGTATCATCGTACAGTT+TGG - chr2.2:7533226-7533245 MS.gene043562:intron 40.0%
GCCAAAAAACTGAATGTGGT+TGG - chr2.2:7533811-7533830 MS.gene043562:CDS 40.0%
GGAAGAAGATGAAACAGTTC+TGG + chr2.2:7533758-7533777 None:intergenic 40.0%
GTATCAACTCGCTTATATGC+TGG + chr2.2:7532520-7532539 None:intergenic 40.0%
GTATCCAATTTCTGCTGCAA+TGG + chr2.2:7533470-7533489 None:intergenic 40.0%
GTGAAGCATATTTAGCCAAG+GGG + chr2.2:7533945-7533964 None:intergenic 40.0%
TAAGTTCTATCAGCGGTTTC+TGG + chr2.2:7530753-7530772 None:intergenic 40.0%
TAATGGAGACATTCAGCTGA+TGG - chr2.2:7534383-7534402 MS.gene043562:CDS 40.0%
TACTCAAAGTGCAATGTAGC+AGG + chr2.2:7531698-7531717 None:intergenic 40.0%
TATGCTTCACTTGTCATGTC+TGG - chr2.2:7533955-7533974 MS.gene043562:CDS 40.0%
TCATTGCAGCATATACAGCA+TGG + chr2.2:7532258-7532277 None:intergenic 40.0%
TCGACTAATTCAGGAGTCAT+GGG + chr2.2:7530783-7530802 None:intergenic 40.0%
TGAGATTGATATTGATGCGC+TGG - chr2.2:7533639-7533658 MS.gene043562:CDS 40.0%
TGAGTTTGTGGTTGTTGTGT+TGG + chr2.2:7530552-7530571 None:intergenic 40.0%
TGGATTTCCTATAGCGAAGA+TGG - chr2.2:7531523-7531542 MS.gene043562:CDS 40.0%
TGTAGTTATCGGTGGGATAA+TGG - chr2.2:7533678-7533697 MS.gene043562:CDS 40.0%
TTCGACTAATTCAGGAGTCA+TGG + chr2.2:7530784-7530803 None:intergenic 40.0%
TTGATGAACTTCAGGAGTGA+AGG - chr2.2:7534583-7534602 MS.gene043562:CDS 40.0%
TTGGAAGGAATATGAGCTTG+AGG - chr2.2:7531214-7531233 MS.gene043562:CDS 40.0%
TTTCAGATTGTTGCTACTGC+TGG - chr2.2:7534270-7534289 MS.gene043562:CDS 40.0%
! AGAAGATGAAACAGTTCTGG+TGG + chr2.2:7533755-7533774 None:intergenic 40.0%
! ATCCCTTGACCGATTCTATT+TGG + chr2.2:7532652-7532671 None:intergenic 40.0%
! CAGCCTGGAAACTTTGAAAA+AGG + chr2.2:7534054-7534073 None:intergenic 40.0%
! CAGGTCATGGACTGAAAAAT+TGG - chr2.2:7533789-7533808 MS.gene043562:CDS 40.0%
! CATCTAGGTATCGTTGTAGA+GGG + chr2.2:7533279-7533298 None:intergenic 40.0%
! GAAGATGAAACAGTTCTGGT+GGG + chr2.2:7533754-7533773 None:intergenic 40.0%
! GCGAAGGCTTTTATTGACAT+TGG - chr2.2:7534246-7534265 MS.gene043562:CDS 40.0%
! GTTCGCCCTTCTTATGTTTT+GGG - chr2.2:7533499-7533518 MS.gene043562:CDS 40.0%
! TACCAGATAGTGGTAACTTC+TGG + chr2.2:7534176-7534195 None:intergenic 40.0%
! TCATCTAGGTATCGTTGTAG+AGG + chr2.2:7533280-7533299 None:intergenic 40.0%
! TCCTAGCAATTCCTCCTTTT+GGG + chr2.2:7533429-7533448 None:intergenic 40.0%
! TGTCAATATTGGCTGAGAAC+CGG + chr2.2:7532053-7532072 None:intergenic 40.0%
! TGTTCGCCCTTCTTATGTTT+TGG - chr2.2:7533498-7533517 MS.gene043562:CDS 40.0%
!! ATGCTGGCTTGAATTCATCT+AGG + chr2.2:7533294-7533313 None:intergenic 40.0%
!! ATTGATTTGGAAAGGCCTGA+TGG - chr2.2:7533208-7533227 MS.gene043562:intron 40.0%
!! CAGCTTTTTGAAAAGACTCC+TGG + chr2.2:7532123-7532142 None:intergenic 40.0%
!! GAAATCATTGTTGGGTTGGA+AGG - chr2.2:7531199-7531218 MS.gene043562:CDS 40.0%
!! GATAATGGAGCACATTGAAC+AGG - chr2.2:7533693-7533712 MS.gene043562:CDS 40.0%
!! GCTTCAAGTTGAATAGGATC+TGG - chr2.2:7532972-7532991 MS.gene043562:intron 40.0%
!! GGAGTGGAAGTTTGTTGAAA+TGG + chr2.2:7530383-7530402 None:intergenic 40.0%
!! GGGGAATGTATTTTTGCTTG+AGG - chr2.2:7533867-7533886 MS.gene043562:CDS 40.0%
!! TCAATTTGCTGTTAATCCGG+TGG - chr2.2:7531430-7531449 MS.gene043562:CDS 40.0%
!! TCATTGTCCATTGCTTTTGC+AGG - chr2.2:7533069-7533088 MS.gene043562:intron 40.0%
!! TGGAGAGGATTTGTTGAGAA+GGG + chr2.2:7530469-7530488 None:intergenic 40.0%
!! TTGGAGAGGATTTGTTGAGA+AGG + chr2.2:7530470-7530489 None:intergenic 40.0%
!!! AAGGTTTTGATTTTGGGTGG+AGG - chr2.2:7532625-7532644 MS.gene043562:CDS 40.0%
!!! CCCAACCACATTCAGTTTTT+TGG + chr2.2:7533815-7533834 None:intergenic 40.0%
AAGCATATTTAGCCAAGGGG+TGG + chr2.2:7533942-7533961 None:intergenic 45.0%
AAGCCTTCGCAATCTTCTCA+AGG + chr2.2:7534236-7534255 None:intergenic 45.0%
AATAGAACAGGCAGAGTCAC+CGG + chr2.2:7533731-7533750 None:intergenic 45.0%
ACCCAAAAGGAGGAATTGCT+AGG - chr2.2:7533425-7533444 MS.gene043562:CDS 45.0%
AGAAAGAAGTCCGAAGTAGG+CGG - chr2.2:7532476-7532495 MS.gene043562:CDS 45.0%
AGCGCAGACTTTGACTGATA+AGG - chr2.2:7531334-7531353 MS.gene043562:CDS 45.0%
AGCTCCCACTACAAGAAAGA+AGG - chr2.2:7532606-7532625 MS.gene043562:CDS 45.0%
AGGAACACACTACCAGATAG+TGG + chr2.2:7534186-7534205 None:intergenic 45.0%
ATGTTGCTGAAGACAGAGAG+AGG - chr2.2:7533368-7533387 MS.gene043562:CDS 45.0%
ATTAGAGGGAAAGCGAGGAA+TGG + chr2.2:7530427-7530446 None:intergenic 45.0%
ATTATACGCAATCCCACCAC+CGG + chr2.2:7531111-7531130 None:intergenic 45.0%
CAAGGCAATGTAGTTATCGG+TGG - chr2.2:7533670-7533689 MS.gene043562:CDS 45.0%
CAGATTGAACACCCAAAAGG+AGG - chr2.2:7533415-7533434 MS.gene043562:CDS 45.0%
CCATGACCTGATTGTTTCCA+AGG + chr2.2:7533779-7533798 None:intergenic 45.0%
CCTTGGAAACAATCAGGTCA+TGG - chr2.2:7533776-7533795 MS.gene043562:CDS 45.0%
CGACCACCCAAAACATAAGA+AGG + chr2.2:7533508-7533527 None:intergenic 45.0%
CGAGATCTGTCAAATCAGAC+AGG + chr2.2:7532390-7532409 None:intergenic 45.0%
CGAGGAATGGGAGAGAAAAT+TGG + chr2.2:7530414-7530433 None:intergenic 45.0%
CTTAGAAAGATGTCACAGCC+TGG + chr2.2:7534069-7534088 None:intergenic 45.0%
CTTGCCATTGCAGCAGAAAT+TGG - chr2.2:7533463-7533482 MS.gene043562:CDS 45.0%
GAAAGATTAGAGGGAAAGCG+AGG + chr2.2:7530432-7530451 None:intergenic 45.0%
GAATGGGAGGGAAAGATTAG+AGG + chr2.2:7530442-7530461 None:intergenic 45.0%
GACAACAGTTAATGGTGCTC+TGG - chr2.2:7534491-7534510 MS.gene043562:CDS 45.0%
GATCCTATGGGTGTTCATAC+TGG - chr2.2:7531290-7531309 MS.gene043562:CDS 45.0%
GATGGTCATGTTCGCATTTG+GGG - chr2.2:7533325-7533344 MS.gene043562:CDS 45.0%
GCAGAAGACCTAGAAACTCT+AGG + chr2.2:7531485-7531504 None:intergenic 45.0%
GCATGCGAATTCGATTACTC+AGG - chr2.2:7530645-7530664 MS.gene043562:CDS 45.0%
GCTGGTGACATGATAGCTAA+TGG - chr2.2:7534366-7534385 MS.gene043562:CDS 45.0%
GGACCAAATAGAATCGGTCA+AGG - chr2.2:7532646-7532665 MS.gene043562:CDS 45.0%
GGATCTGTCATGATTGTTGC+TGG + chr2.2:7530732-7530751 None:intergenic 45.0%
GGATGGTCATGTTCGCATTT+GGG - chr2.2:7533324-7533343 MS.gene043562:CDS 45.0%
GGGATAAAAACACCACCTTC+TGG - chr2.2:7530996-7531015 MS.gene043562:CDS 45.0%
GGTATCATCGTACAGTTTGG+AGG - chr2.2:7533229-7533248 MS.gene043562:intron 45.0%
GGTGGAGGACCAAATAGAAT+CGG - chr2.2:7532640-7532659 MS.gene043562:CDS 45.0%
GTAATCTGTGGATACGGTCT+CGG + chr2.2:7533131-7533150 None:intergenic 45.0%
GTACTACAAGTACCAGAAGG+TGG + chr2.2:7531011-7531030 None:intergenic 45.0%
GTCTTCTGCTCTTGCTAGTA+AGG - chr2.2:7531496-7531515 MS.gene043562:CDS 45.0%
GTTCTTGAAATCGCAAGGGT+CGG - chr2.2:7531731-7531750 MS.gene043562:CDS 45.0%
GTTTGTGGTTGTTGTGTTGG+TGG + chr2.2:7530549-7530568 None:intergenic 45.0%
TAAGAAGGGCGAACAACAAC+CGG + chr2.2:7533493-7533512 None:intergenic 45.0%
TAATCTGTGGATACGGTCTC+GGG + chr2.2:7533130-7533149 None:intergenic 45.0%
TCACCAGTATGAACACCCAT+AGG + chr2.2:7531296-7531315 None:intergenic 45.0%
TCACCTTGAGAAGATTGCGA+AGG - chr2.2:7534230-7534249 MS.gene043562:CDS 45.0%
TCCTAAACACGTGTCAGTCA+AGG - chr2.2:7534017-7534036 MS.gene043562:CDS 45.0%
TCCTTGACTGACACGTGTTT+AGG + chr2.2:7534021-7534040 None:intergenic 45.0%
TGAAGGAGTTGGACTATGAC+CGG - chr2.2:7532188-7532207 MS.gene043562:intron 45.0%
TGCAGCAGAAATTGGATACC+CGG - chr2.2:7533471-7533490 MS.gene043562:CDS 45.0%
TGTTGAGAAGGGAGTGGAAT+GGG + chr2.2:7530458-7530477 None:intergenic 45.0%
TTAGAGGGAAAGCGAGGAAT+GGG + chr2.2:7530426-7530445 None:intergenic 45.0%
TTATCAGTCAAAGTCTGCGC+TGG + chr2.2:7531335-7531354 None:intergenic 45.0%
TTCGCAATCTTCTCAAGGTG+AGG + chr2.2:7534231-7534250 None:intergenic 45.0%
TTGTTGAGAAGGGAGTGGAA+TGG + chr2.2:7530459-7530478 None:intergenic 45.0%
! AGTTCTGGTGGGAATAGAAC+AGG + chr2.2:7533743-7533762 None:intergenic 45.0%
! CTAGTGCTGAAGCTACATGA+AGG - chr2.2:7534333-7534352 MS.gene043562:CDS 45.0%
! CTCCTAGCAATTCCTCCTTT+TGG + chr2.2:7533430-7533449 None:intergenic 45.0%
! GTCAATATTGGCTGAGAACC+GGG + chr2.2:7532052-7532071 None:intergenic 45.0%
! GTGGAAATGGAGAGTGGTTT+TGG + chr2.2:7530489-7530508 None:intergenic 45.0%
! TCAATAAGAACAGGGCGTTC+TGG + chr2.2:7533598-7533617 None:intergenic 45.0%
! TCATGCATCCTTTTCTCTCC+AGG - chr2.2:7532693-7532712 MS.gene043562:CDS 45.0%
! TCGGTTCTTTTGCCGTGTTT+TGG + chr2.2:7530576-7530595 None:intergenic 45.0%
! TGCAAAGCATTACGCGAAGA+AGG - chr2.2:7530678-7530697 MS.gene043562:CDS 45.0%
!! AGGATTTGTTGAGAAGGGAG+TGG + chr2.2:7530464-7530483 None:intergenic 45.0%
!! ATGGTTTCTGAGGCAGTTGA+AGG - chr2.2:7532327-7532346 MS.gene043562:CDS 45.0%
!! GAGGATGGCTTTGGATTACA+AGG - chr2.2:7534458-7534477 MS.gene043562:CDS 45.0%
!! TTTGCTGTTAATCCGGTGGA+TGG - chr2.2:7531434-7531453 MS.gene043562:CDS 45.0%
!!! AATGGAGAGTGGTTTTGGAG+AGG + chr2.2:7530484-7530503 None:intergenic 45.0%
!!! CCGTGTTTTGGTTGAGTTTG+TGG + chr2.2:7530564-7530583 None:intergenic 45.0%
AAAAGCAATTGGCCACCCCT+TGG - chr2.2:7533927-7533946 MS.gene043562:CDS 50.0%
AAGAAGGGCGAACAACAACC+GGG + chr2.2:7533492-7533511 None:intergenic 50.0%
ACCATAACCTCACCATCCAC+CGG + chr2.2:7531449-7531468 None:intergenic 50.0%
AGCGGTGCGTTGGAGAAATA+TGG - chr2.2:7530891-7530910 MS.gene043562:CDS 50.0%
AGTCCTGAGATGCGTAGTAC+TGG - chr2.2:7534087-7534106 MS.gene043562:CDS 50.0%
AGTTGGAGAGTCAATGGCAG+TGG - chr2.2:7532087-7532106 MS.gene043562:intron 50.0%
ATGGAGCACATTGAACAGGC+TGG - chr2.2:7533697-7533716 MS.gene043562:CDS 50.0%
ATGGCTGCGAAGTTGTCTGT+TGG - chr2.2:7531542-7531561 MS.gene043562:CDS 50.0%
CAAGAGATAGCCGCCTACTT+CGG + chr2.2:7532489-7532508 None:intergenic 50.0%
CCACCTCAACAGCAGTTTCA+AGG + chr2.2:7533573-7533592 None:intergenic 50.0%
CCTTGAAACTGCTGTTGAGG+TGG - chr2.2:7533570-7533589 MS.gene043562:CDS 50.0%
GAACAGGCTGGGATACATTC+CGG - chr2.2:7533709-7533728 MS.gene043562:CDS 50.0%
GAAGGAGTTGGACTATGACC+GGG - chr2.2:7532189-7532208 MS.gene043562:intron 50.0%
GCTAAGGCTCAAATTGCTGC+TGG - chr2.2:7534150-7534169 MS.gene043562:CDS 50.0%
GCTATCATGTCACCAGCATG+AGG + chr2.2:7534363-7534382 None:intergenic 50.0%
GCTCTTGCTAGTAAGGCTAC+TGG - chr2.2:7531503-7531522 MS.gene043562:CDS 50.0%
GGCCAGAAGTTACCACTATC+TGG - chr2.2:7534171-7534190 MS.gene043562:CDS 50.0%
GGCTTCAAATTCTGCAGCAC+AGG + chr2.2:7532542-7532561 None:intergenic 50.0%
GGGATGGTCATGTTCGCATT+TGG - chr2.2:7533323-7533342 MS.gene043562:CDS 50.0%
GTTGGAGAGTCAATGGCAGT+GGG - chr2.2:7532088-7532107 MS.gene043562:intron 50.0%
TAACCTCCGGGTTCCTAATC+CGG - chr2.2:7532225-7532244 MS.gene043562:intron 50.0%
TACAAATGGCACGGTACGAG+AGG + chr2.2:7533905-7533924 None:intergenic 50.0%
TAGCTTCAGCACTAGCACAG+CGG + chr2.2:7534328-7534347 None:intergenic 50.0%
TATACAGCATGGATGCGCTC+CGG + chr2.2:7532247-7532266 None:intergenic 50.0%
TCACCAGTACTACGCATCTC+AGG + chr2.2:7534093-7534112 None:intergenic 50.0%
TGGAGCACATTGAACAGGCT+GGG - chr2.2:7533698-7533717 MS.gene043562:CDS 50.0%
TGTTAATCCGGTGGATGGTG+AGG - chr2.2:7531439-7531458 MS.gene043562:CDS 50.0%
TTCGCAGCCATCTTCGCTAT+AGG + chr2.2:7531533-7531552 None:intergenic 50.0%
TTGGAGAGTCAATGGCAGTG+GGG - chr2.2:7532089-7532108 MS.gene043562:intron 50.0%
! AGAGGGAGAGCTAGTTTCAG+TGG + chr2.2:7533262-7533281 None:intergenic 50.0%
! GCTTAATTTGGCCGTCGCTT+TGG - chr2.2:7530863-7530882 MS.gene043562:CDS 50.0%
! TGTGGTTGTTGTGTTGGTGG+TGG + chr2.2:7530546-7530565 None:intergenic 50.0%
!! AGGGAGATTGGTGTTGAGTG+TGG - chr2.2:7531395-7531414 MS.gene043562:CDS 50.0%
!! CGCCCTTCTTATGTTTTGGG+TGG - chr2.2:7533502-7533521 MS.gene043562:CDS 50.0%
!! CGTAGTACTGGTGAGGTCAT+GGG - chr2.2:7534099-7534118 MS.gene043562:CDS 50.0%
!! GAGATTGGTGTTGAGTGTGG+TGG - chr2.2:7531398-7531417 MS.gene043562:CDS 50.0%
!! GCTGTTCGCTCTCTAGAACA+CGG - chr2.2:7532139-7532158 MS.gene043562:intron 50.0%
!! GTATAGATGGTCTGGCTCTG+AGG - chr2.2:7534436-7534455 MS.gene043562:CDS 50.0%
!! GTTAGACCGGCTTTTACGCT+GGG - chr2.2:7531080-7531099 MS.gene043562:CDS 50.0%
!! TGAGATGCGTAGTACTGGTG+AGG - chr2.2:7534092-7534111 MS.gene043562:CDS 50.0%
!! TGTTAGACCGGCTTTTACGC+TGG - chr2.2:7531079-7531098 MS.gene043562:CDS 50.0%
!! TGTTTTGGGTGGTCGAGCAA+TGG - chr2.2:7533513-7533532 MS.gene043562:CDS 50.0%
AGCGACGGCCAAATTAAGCG+CGG + chr2.2:7530862-7530881 None:intergenic 55.0%
AGCTTCAGCACTAGCACAGC+GGG + chr2.2:7534327-7534346 None:intergenic 55.0%
CCTGCTGCCTGCAAAAGCAA+TGG + chr2.2:7533079-7533098 None:intergenic 55.0%
CGAAGTAGGCGGCTATCTCT+TGG - chr2.2:7532487-7532506 MS.gene043562:CDS 55.0%
CGGCCAAACCGCGCTTAATT+TGG - chr2.2:7530851-7530870 MS.gene043562:CDS 55.0%
CGGCCAAATTAAGCGCGGTT+TGG + chr2.2:7530857-7530876 None:intergenic 55.0%
GAGAAGGGAGTGGAATGGGA+GGG + chr2.2:7530454-7530473 None:intergenic 55.0%
GGCGCAGGACCAATCGTTAT+AGG - chr2.2:7530618-7530637 MS.gene043562:CDS 55.0%
GTTCCTCCCAGCGTAAAAGC+CGG + chr2.2:7531089-7531108 None:intergenic 55.0%
TCAAGCCAGCATGTGCCAGT+GGG - chr2.2:7533302-7533321 MS.gene043562:intron 55.0%
TCCGGTGGATGGTGAGGTTA+TGG - chr2.2:7531445-7531464 MS.gene043562:CDS 55.0%
TGAGAAGGGAGTGGAATGGG+AGG + chr2.2:7530455-7530474 None:intergenic 55.0%
TTCAAGCCAGCATGTGCCAG+TGG - chr2.2:7533301-7533320 MS.gene043562:intron 55.0%
TTGTGGAGCGGTGAAGGAGT+TGG - chr2.2:7532177-7532196 MS.gene043562:intron 55.0%
! GCTTTTACGCTGGGAGGAAC+CGG - chr2.2:7531089-7531108 MS.gene043562:CDS 55.0%
!! CCATTGCTTTTGCAGGCAGC+AGG - chr2.2:7533076-7533095 MS.gene043562:intron 55.0%
!! GCGTAGTACTGGTGAGGTCA+TGG - chr2.2:7534098-7534117 MS.gene043562:CDS 55.0%
!! GGTTGTTGTGTTGGTGGTGG+TGG + chr2.2:7530543-7530562 None:intergenic 55.0%
!! TAGATGGTCTGGCTCTGAGG+AGG - chr2.2:7534439-7534458 MS.gene043562:CDS 55.0%
!! TGTTGTGTTGGTGGTGGTGG+TGG + chr2.2:7530540-7530559 None:intergenic 55.0%
AAGATCCTCATCCTCGGCGC+AGG - chr2.2:7530603-7530622 MS.gene043562:CDS 60.0%
ACCGCTCTCAGCCAAAGCGA+CGG + chr2.2:7530877-7530896 None:intergenic 60.0%
AGAACACGGCCACGCTGGAT+GGG - chr2.2:7532153-7532172 MS.gene043562:intron 60.0%
ATGGGGTTGTGGAGCGGTGA+AGG - chr2.2:7532171-7532190 MS.gene043562:intron 60.0%
CAAGCCAGCATGTGCCAGTG+GGG - chr2.2:7533303-7533322 MS.gene043562:intron 60.0%
GCATGGATGCGCTCCGGATT+AGG + chr2.2:7532241-7532260 None:intergenic 60.0%
GCGAACATGACCATCCCCAC+TGG + chr2.2:7533320-7533339 None:intergenic 60.0%
GCTTCAGCACTAGCACAGCG+GGG + chr2.2:7534326-7534345 None:intergenic 60.0%
TAGAACACGGCCACGCTGGA+TGG - chr2.2:7532152-7532171 MS.gene043562:intron 60.0%
TTTACGCTGGGAGGAACCGG+TGG - chr2.2:7531092-7531111 MS.gene043562:CDS 60.0%
TTTGGCTGAGAGCGGTGCGT+TGG - chr2.2:7530881-7530900 MS.gene043562:CDS 60.0%
! TAACGATTGGTCCTGCGCCG+AGG + chr2.2:7530617-7530636 None:intergenic 60.0%
! TGCGCTCCGGATTAGGAACC+CGG + chr2.2:7532234-7532253 None:intergenic 60.0%
!! AGACCGGCTTTTACGCTGGG+AGG - chr2.2:7531083-7531102 MS.gene043562:CDS 60.0%
!! GATGCGCTGGCTGACTCACA+AGG - chr2.2:7533652-7533671 MS.gene043562:CDS 60.0%
!! GCGGTGGTGGAAATGGAGAG+TGG + chr2.2:7530495-7530514 None:intergenic 60.0%
!! GGCTCTGAGGAGGATGGCTT+TGG - chr2.2:7534449-7534468 MS.gene043562:CDS 60.0%
!! TCTCTAGAACACGGCCACGC+TGG - chr2.2:7532148-7532167 MS.gene043562:intron 60.0%
!! TGGTCTGGCTCTGAGGAGGA+TGG - chr2.2:7534443-7534462 MS.gene043562:CDS 60.0%
!! TGTTGGTGGTGGTGGTGGTG+CGG + chr2.2:7530535-7530554 None:intergenic 60.0%
CCAGCATGTGCCAGTGGGGA+TGG - chr2.2:7533307-7533326 MS.gene043562:intron 65.0%
CCATCCCCACTGGCACATGC+TGG + chr2.2:7533310-7533329 None:intergenic 65.0%
CGCTGGATGGGGTTGTGGAG+CGG - chr2.2:7532165-7532184 MS.gene043562:intron 65.0%
CTCCACAACCCCATCCAGCG+TGG + chr2.2:7532165-7532184 None:intergenic 65.0%
GAACACGGCCACGCTGGATG+GGG - chr2.2:7532154-7532173 MS.gene043562:intron 65.0%
GACGCCCTTCTCCCGACCAT+GGG - chr2.2:7530828-7530847 MS.gene043562:CDS 65.0%
GCACGGTACGAGAGGCTCGA+GGG + chr2.2:7533897-7533916 None:intergenic 65.0%
TGGTGCGGCGGTTGTTGCGA+CGG + chr2.2:7530520-7530539 None:intergenic 65.0%
TTGGTCCTGCGCCGAGGATG+AGG + chr2.2:7530611-7530630 None:intergenic 65.0%
! CATGGTCGGGAGAAGGGCGT+CGG + chr2.2:7530829-7530848 None:intergenic 65.0%
! GCCGTCGCTTTGGCTGAGAG+CGG - chr2.2:7530873-7530892 MS.gene043562:CDS 65.0%
! GCTCCGGATTAGGAACCCGG+AGG + chr2.2:7532231-7532250 None:intergenic 65.0%
!! ATGGTCGGGAGAAGGGCGTC+GGG + chr2.2:7530828-7530847 None:intergenic 65.0%
ACGCTGGGAGGAACCGGTGG+TGG - chr2.2:7531095-7531114 MS.gene043562:CDS 70.0%
CGACGCCCTTCTCCCGACCA+TGG - chr2.2:7530827-7530846 MS.gene043562:CDS 70.0%
CGCTGGGAGGAACCGGTGGT+GGG - chr2.2:7531096-7531115 MS.gene043562:CDS 70.0%
GCCCTTCTCCCGACCATGGG+CGG - chr2.2:7530831-7530850 MS.gene043562:CDS 70.0%
GCCGCCCATGGTCGGGAGAA+GGG + chr2.2:7530835-7530854 None:intergenic 70.0%
GGCACGGTACGAGAGGCTCG+AGG + chr2.2:7533898-7533917 None:intergenic 70.0%
GGCAGTGGGGCGAACCTTCC+AGG - chr2.2:7532102-7532121 MS.gene043562:intron 70.0%
GGCCACGCTGGATGGGGTTG+TGG - chr2.2:7532160-7532179 MS.gene043562:intron 70.0%
TGCGGCGGTTGTTGCGACGG+CGG + chr2.2:7530517-7530536 None:intergenic 70.0%
! AAGCGCGGTTTGGCCGCCCA+TGG + chr2.2:7530847-7530866 None:intergenic 70.0%
! CGGTTTGGCCGCCCATGGTC+GGG + chr2.2:7530842-7530861 None:intergenic 70.0%
! GCGGTTTGGCCGCCCATGGT+CGG + chr2.2:7530843-7530862 None:intergenic 70.0%
!! GACGGCGGCGGTGGTGGAAA+TGG + chr2.2:7530502-7530521 None:intergenic 70.0%
!! GAGAAGGGCGTCGGGGCGTT+CGG + chr2.2:7530820-7530839 None:intergenic 70.0%
!! TGGTCGGGAGAAGGGCGTCG+GGG + chr2.2:7530827-7530846 None:intergenic 70.0%
!! TGGTGGTGGTGGTGGTGCGG+CGG + chr2.2:7530532-7530551 None:intergenic 70.0%
GGCCGCCCATGGTCGGGAGA+AGG + chr2.2:7530836-7530855 None:intergenic 75.0%
GGCGGTTGTTGCGACGGCGG+CGG + chr2.2:7530514-7530533 None:intergenic 75.0%
GGTTGTTGCGACGGCGGCGG+TGG + chr2.2:7530511-7530530 None:intergenic 75.0%
TGTTGCGACGGCGGCGGTGG+TGG + chr2.2:7530508-7530527 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 7530357 7534602 7530357 ID=MS.gene043562
chr2.2 mRNA 7530357 7534602 7530357 ID=MS.gene043562.t1;Parent=MS.gene043562
chr2.2 exon 7533310 7534602 7533310 ID=MS.gene043562.t1.exon1;Parent=MS.gene043562.t1
chr2.2 CDS 7533310 7534602 7533310 ID=cds.MS.gene043562.t1;Parent=MS.gene043562.t1
chr2.2 exon 7532245 7532937 7532245 ID=MS.gene043562.t1.exon2;Parent=MS.gene043562.t1
chr2.2 CDS 7532245 7532937 7532245 ID=cds.MS.gene043562.t1;Parent=MS.gene043562.t1
chr2.2 exon 7530357 7531868 7530357 ID=MS.gene043562.t1.exon3;Parent=MS.gene043562.t1
chr2.2 CDS 7530357 7531868 7530357 ID=cds.MS.gene043562.t1;Parent=MS.gene043562.t1
Gene Sequence

>MS.gene043562

ATGTCAATGGCTTATTCCATCACCCATTTCAACAAACTTCCACTCCATTCCTCTCCAATTTTCTCTCCCATTCCTCGCTTTCCCTCTAATCTTTCCCTCCCATTCCACTCCCTTCTCAACAAATCCTCTCCAAAACCACTCTCCATTTCCACCACCGCCGCCGTCGCAACAACCGCCGCACCACCACCACCACCAACACAACAACCACAAACTCAACCAAAACACGGCAAAAGAACCGACATAAAAAAGATCCTCATCCTCGGCGCAGGACCAATCGTTATAGGTCAAGCATGCGAATTCGATTACTCAGGAACACAAGCATGCAAAGCATTACGCGAAGAAGGTTACCAAGTTATTCTCATAAACTCAAATCCAGCAACAATCATGACAGATCCAGAAACCGCTGATAGAACTTATATCACACCCATGACTCCTGAATTAGTCGAACAAGTTCTCGAATCCGAACGCCCCGACGCCCTTCTCCCGACCATGGGCGGCCAAACCGCGCTTAATTTGGCCGTCGCTTTGGCTGAGAGCGGTGCGTTGGAGAAATATGGAGTTGAGTTAATTGGTGCTAAATTGGAAGCTATTAAAAAAGCTGAAGATAGAGAGCTTTTTAAACAAGCTATGAAGAATATTGGGATAAAAACACCACCTTCTGGTACTTGTAGTACATTAGAAGAGTGTATGCAAATTGCCAATGAAATTGAGTTTCCTTTGATTGTTAGACCGGCTTTTACGCTGGGAGGAACCGGTGGTGGGATTGCGTATAATCGCGAAGATTTGATGGAGATTTGTAAAGCTGGGATAGCTGCTAGTTTAACTAATCAGGTTTTGATTGAGAAATCATTGTTGGGTTGGAAGGAATATGAGCTTGAGGTTATGAGAGATTTAGCTGATAATGTTGTGATTATTTGTTCTATTGAGAATATTGATCCTATGGGTGTTCATACTGGTGATTCGATTACGGTTGCTCCAGCGCAGACTTTGACTGATAAGGAGTATCAGCGATTGAGAGATTATTCAATTGCGATTATTAGGGAGATTGGTGTTGAGTGTGGTGGTTCAAATGTTCAATTTGCTGTTAATCCGGTGGATGGTGAGGTTATGGTGATTGAGATGAATCCTAGAGTTTCTAGGTCTTCTGCTCTTGCTAGTAAGGCTACTGGATTTCCTATAGCGAAGATGGCTGCGAAGTTGTCTGTTGGATATTCTTTGGATCAAATTCCGAATGATATAACTAAAAAGACACCTGCTAGTTTTGAGCCTTCTATTGATTATGTGGTTACAAAGGTATAATTCATGTCATGTTATCTTTTTTTGTTTAAAAAGTTTAATCCTGCTACATTGCACTTTGAGTAAATAGGCATTTTAGTTCTTGAAATCGCAAGGGTCGGTAAATTTAGTCCCTTATATTGAAAAACATCAAATCAATTTAGTCCTTGAAATTGATATTTTTCTTTTTAAGTTGTGTGTAATTATACTAGTATGTGACTGCATATGTCATTTTGGTTATCTAGTTTGTAATCTGATTAATAAACTAATTTTTATGCTATGGAGCAAGACATGTGAATACTCTCACAGTTAATCGATATTTGTTATTGTTTGTTGCTTTTAATTCAATTCTGTGTTTTCTAACTTGTGTTTACTCTTTTTGACTTGCAGATTCCTCGGTTTGCTTTTGAAAAATTTCCCGGTTCTCAGCCAATATTGACAACACAGATGAAATCAGTTGGAGAGTCAATGGCAGTGGGGCGAACCTTCCAGGAGTCTTTTCAAAAAGCTGTTCGCTCTCTAGAACACGGCCACGCTGGATGGGGTTGTGGAGCGGTGAAGGAGTTGGACTATGACCGGGAACAATTGAAGTATAACCTCCGGGTTCCTAATCCGGAGCGCATCCATGCTGTATATGCTGCAATGAAGAAAGGGATGCAAATTGATGAAATCTTAGAGCTGAGTTTTATTGATAGATGGTTTCTGAGGCAGTTGAAGGAGCTAGTTGATGTCGAAAATTTCTTGATGTCGAATAACCTGTCTGATTTGACAGATCTCGATTTCTATGAGGTAAAAAGAAGAGGATTTAGTGATAAACAGATAGCATTTGCAACCAAGTCCAATGAGAAAGAAGTCCGAAGTAGGCGGCTATCTCTTGGTGTTGTTCCAGCATATAAGCGAGTTGATACCTGTGCTGCAGAATTTGAAGCCAATACTCCTTATATGTACTCCTCTTATGATTTTGAGTGTGAATCAGCTCCCACTACAAGAAAGAAGGTTTTGATTTTGGGTGGAGGACCAAATAGAATCGGTCAAGGGATTGAGTTTGACTATTGTTGCTGTCATGCATCCTTTTCTCTCCAGGTTCGTTATCTTTCCCTTTCTATTAACTAGATTCCAGATATTCAAGTATTCATGCTCCACTAGTTGTGTGTTTATTTGTGGATACCAATAAACAAATGAACATAATATGTTATTGATCTTTTTCATCTATCTATGATAGTGTGCCTACCATGACTTTAGCTTTCAGTGATTAAGTATTATATTTGAATTTCATGCACTGTCCATCAGTTTAGTGCTATGTACTTAAACGTGATGAATTTGTCAGTGTTCTGTTTTGTGCTTCAAGTTGAATAGGATCTGGATCTCGCTCATCTCGATATTTGGCCTGATAAATCGTATATTTTATTGCTGTGCTACTACTTTTATTAAATGTCATCATTGTCCATTGCTTTTGCAGGCAGCAGGATATGAGACAATCATGGTGAATTCAAATCCCGAGACCGTATCCACAGATTACGACACTAGTGATCGTCTCTACTTTGAACCCTTGACTGTTGAAGATGTTTTGAACATTATTGATTTGGAAAGGCCTGATGGTATCATCGTACAGTTTGGAGGTCAAACACCACTGAAACTAGCTCTCCCTCTACAACGATACCTAGATGAATTCAAGCCAGCATGTGCCAGTGGGGATGGTCATGTTCGCATTTGGGGAACATCTCCTGATTCTATTGATGTTGCTGAAGACAGAGAGAGGTTCAATGTGATGCTTCATGAACTACAGATTGAACACCCAAAAGGAGGAATTGCTAGGAGTGAAGCTGATGCACTTGCCATTGCAGCAGAAATTGGATACCCGGTTGTTGTTCGCCCTTCTTATGTTTTGGGTGGTCGAGCAATGGAGATTGTATATAGCGATGAAAGACTTGTGACATACCTTGAAACTGCTGTTGAGGTGGATCCAGAACGCCCTGTTCTTATTGACAAGTATTTGTCTGATGCCTGTGAGATTGATATTGATGCGCTGGCTGACTCACAAGGCAATGTAGTTATCGGTGGGATAATGGAGCACATTGAACAGGCTGGGATACATTCCGGTGACTCTGCCTGTTCTATTCCCACCAGAACTGTTTCATCTTCTTCCTTGGAAACAATCAGGTCATGGACTGAAAAATTGGCCAAAAAACTGAATGTGGTTGGGCTCATGAATTGTCAGTATGCAATAACTCCATCGGGGAATGTATTTTTGCTTGAGGCTAACCCTCGAGCCTCTCGTACCGTGCCATTTGTATCAAAAGCAATTGGCCACCCCTTGGCTAAATATGCTTCACTTGTCATGTCTGGAAAGTCTCTTCATGATATAAAGTTTACAAAAGAGGTTATTCCTAAACACGTGTCAGTCAAGGAAGCAGTTCTTCCTTTTTCAAAGTTTCCAGGCTGTGACATCTTTCTAAGTCCTGAGATGCGTAGTACTGGTGAGGTCATGGGTATTGACCCTTCATATAACATTGCATTTGCTAAGGCTCAAATTGCTGCTGGCCAGAAGTTACCACTATCTGGTAGTGTGTTCCTTAGCTTGAATGACTTAACGAAGCCTCACCTTGAGAAGATTGCGAAGGCTTTTATTGACATTGGATTTCAGATTGTTGCTACTGCTGGAACAGCTCTTGCTCTTAAATTCTGCAATATCCCCGCTGTGCTAGTGCTGAAGCTACATGAAGGAAGGCCTCATGCTGGTGACATGATAGCTAATGGAGACATTCAGCTGATGGTTGTAACTAGTTCAGATGATGCACTTGATCGTATAGATGGTCTGGCTCTGAGGAGGATGGCTTTGGATTACAAGGTTCCTATTGTGACAACAGTTAATGGTGCTCTGGCAACTGCCGAAGCAATAAAGAGCTTGAAGTCCAATTCTATCAAAATGATTGCTCTTCAGGACTTCATTGTTGATGAACTTCAGGAGTGA
Protein sequence

>MS.gene043562.t1

MSMAYSITHFNKLPLHSSPIFSPIPRFPSNLSLPFHSLLNKSSPKPLSISTTAAVATTAAPPPPPTQQPQTQPKHGKRTDIKKILILGAGPIVIGQACEFDYSGTQACKALREEGYQVILINSNPATIMTDPETADRTYITPMTPELVEQVLESERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLEAIKKAEDRELFKQAMKNIGIKTPPSGTCSTLEECMQIANEIEFPLIVRPAFTLGGTGGGIAYNREDLMEICKAGIAASLTNQVLIEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGESMAVGRTFQESFQKAVRSLEHGHAGWGCGAVKELDYDREQLKYNLRVPNPERIHAVYAAMKKGMQIDEILELSFIDRWFLRQLKELVDVENFLMSNNLSDLTDLDFYEVKRRGFSDKQIAFATKSNEKEVRSRRLSLGVVPAYKRVDTCAAEFEANTPYMYSSYDFECESAPTTRKKVLILGGGPNRIGQGIEFDYCCCHASFSLQAAGYETIMVNSNPETVSTDYDTSDRLYFEPLTVEDVLNIIDLERPDGIIVQFGGQTPLKLALPLQRYLDEFKPACASGDGHVRIWGTSPDSIDVAEDRERFNVMLHELQIEHPKGGIARSEADALAIAAEIGYPVVVRPSYVLGGRAMEIVYSDERLVTYLETAVEVDPERPVLIDKYLSDACEIDIDALADSQGNVVIGGIMEHIEQAGIHSGDSACSIPTRTVSSSSLETIRSWTEKLAKKLNVVGLMNCQYAITPSGNVFLLEANPRASRTVPFVSKAIGHPLAKYASLVMSGKSLHDIKFTKEVIPKHVSVKEAVLPFSKFPGCDIFLSPEMRSTGEVMGIDPSYNIAFAKAQIAAGQKLPLSGSVFLSLNDLTKPHLEKIAKAFIDIGFQIVATAGTALALKFCNIPAVLVLKLHEGRPHAGDMIANGDIQLMVVTSSDDALDRIDGLALRRMALDYKVPIVTTVNGALATAEAIKSLKSNSIKMIALQDFIVDELQE