AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08738

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08738.t1 MTR_4g057970 99.148 587 5 0 1 587 1 587 0.0 1148
MS.gene08738.t1 MTR_4g084130 64.991 537 185 1 42 575 34 570 0.0 703
MS.gene08738.t1 MTR_4g084130 64.989 457 157 1 122 575 2 458 0.0 599
MS.gene08738.t1 MTR_1g017380 52.952 542 250 4 45 582 43 583 0.0 541
MS.gene08738.t1 MTR_1g017390 52.768 542 251 4 45 582 43 583 0.0 540
MS.gene08738.t1 MTR_1g090140 44.956 565 304 5 22 582 6 567 5.70e-160 469
MS.gene08738.t1 MTR_1g090130 45.405 555 296 5 22 572 6 557 4.45e-156 459
MS.gene08738.t1 MTR_8g017080 42.750 531 296 4 50 574 36 564 4.02e-140 419
MS.gene08738.t1 MTR_0991s0010 54.545 143 62 2 45 184 43 185 4.23e-43 152
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08738.t1 AT2G28000 85.971 556 77 1 33 587 31 586 0.0 936
MS.gene08738.t1 AT5G18820 60.105 574 214 5 15 583 5 568 0.0 653
MS.gene08738.t1 AT5G56500 51.438 591 276 7 1 584 1 587 0.0 550
MS.gene08738.t1 AT5G56500 51.438 591 276 7 1 584 1 587 0.0 550
MS.gene08738.t1 AT5G18820 61.159 466 172 3 122 583 2 462 0.0 545
MS.gene08738.t1 AT1G55490 50.256 587 278 7 1 574 1 586 0.0 541
MS.gene08738.t1 AT1G55490 50.256 587 278 7 1 574 1 586 0.0 541
MS.gene08738.t1 AT1G55490 50.256 587 278 7 1 574 1 586 0.0 541
MS.gene08738.t1 AT1G55490 50.256 587 278 7 1 574 1 586 0.0 541
MS.gene08738.t1 AT1G55490 50.256 587 278 7 1 574 1 586 0.0 541
MS.gene08738.t1 AT3G13470 51.083 554 266 4 33 582 36 588 0.0 537
MS.gene08738.t1 AT1G26230 45.353 538 285 5 45 574 36 572 5.39e-162 476
MS.gene08738.t1 AT5G18820 59.564 413 161 2 15 426 5 412 1.09e-158 461
MS.gene08738.t1 AT1G26230 45.665 519 275 4 62 574 3 520 1.12e-157 463
MS.gene08738.t1 AT1G26230 45.703 512 271 4 69 574 2 512 1.14e-155 457
MS.gene08738.t1 AT3G23990 44.751 543 294 4 35 573 17 557 3.51e-154 455
MS.gene08738.t1 AT2G33210 43.608 571 301 4 4 572 6 557 6.91e-154 454
MS.gene08738.t1 AT2G33210 45.574 531 280 4 44 572 29 552 7.08e-151 446
MS.gene08738.t1 AT1G26230 45.263 475 256 3 45 516 36 509 2.72e-142 424
MS.gene08738.t1 AT3G13860 43.916 526 291 3 48 571 32 555 2.97e-141 422
MS.gene08738.t1 AT1G26230 44.226 407 223 3 45 448 36 441 4.32e-117 356

Find 169 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAAGATTTGTAACAAAT+TGG 0.150058 4.2:-45104435 None:intergenic
GGCAGCAAAAGTTGCATTCT+TGG 0.207810 4.2:-45105328 None:intergenic
GACTACAACGGCTTCGATTT+TGG 0.214195 4.2:+45103891 MS.gene08738:CDS
ATGCTGGTGCAGCTCTAATT+AGG 0.223973 4.2:+45103686 MS.gene08738:CDS
GCACACCTTGTTACCTTTGC+AGG 0.271719 4.2:-45106174 None:intergenic
GAGTTCCAGGCCAGTGATTT+GGG 0.275875 4.2:+45105027 MS.gene08738:CDS
CTCAAGATTTGTAACAAATT+GGG 0.277700 4.2:-45104434 None:intergenic
GGCAGCAGCCACACCTGCCC+TGG 0.281465 4.2:-45106268 None:intergenic
TGAGTTCCAGGCCAGTGATT+TGG 0.282182 4.2:+45105026 MS.gene08738:CDS
TCTAGTGTTTCCTTGATTGC+TGG 0.293279 4.2:-45105411 None:intergenic
CAGAATGCTGCTTCAGTGGC+TGG 0.296833 4.2:+45106201 MS.gene08738:CDS
ACTGCTAGGTGCTGAGTTCC+AGG 0.304928 4.2:+45105014 MS.gene08738:intron
AAGTAGTTGTGGAGAAAATT+AGG 0.307056 4.2:+45106076 MS.gene08738:CDS
ATATCATCTCCACCTTTAAC+AGG 0.315746 4.2:-45104036 None:intergenic
CAAAGGATGAGTTGCAATCT+AGG 0.316293 4.2:+45105145 MS.gene08738:CDS
CTTTGATGGCAGCCACATTA+AGG 0.329763 4.2:-45104639 None:intergenic
AAAGGTGGAGATGATATAAA+AGG 0.339200 4.2:+45104042 MS.gene08738:CDS
GCCATCAAAGCTCCAGGATT+TGG 0.350317 4.2:+45104652 MS.gene08738:CDS
TGATAAAACAGTAGCGGCTT+TGG 0.352770 4.2:+45103987 MS.gene08738:CDS
AAGTTGGCTAGGCCTGTTAA+AGG 0.361241 4.2:+45104024 MS.gene08738:CDS
TGAAGGGAGGAATGTTGTTT+TGG 0.363805 4.2:+45103585 MS.gene08738:intron
ACCAAATCCTGGAGCTTTGA+TGG 0.365679 4.2:-45104653 None:intergenic
ATTGAGGAAGGTATTGTTCC+TGG 0.374607 4.2:+45105351 MS.gene08738:CDS
AGTTTACGATTCGGAGAAAC+TGG 0.376609 4.2:+45105206 MS.gene08738:CDS
CTCAATTGAACAACTCGGTT+TGG 0.387934 4.2:+45105068 MS.gene08738:CDS
AGATATCACTGGTGAGGCTT+TGG 0.395603 4.2:+45104585 MS.gene08738:CDS
AAACGAGGAGGAAGACTCTA+TGG 0.398802 4.2:-45104243 None:intergenic
TTTCTTCTCTCACCAAATCC+TGG 0.401579 4.2:-45104664 None:intergenic
GCTCAAAATGCTGGAATAGA+AGG 0.412779 4.2:+45106051 MS.gene08738:CDS
GCCACACCTGCCCTGGGCTT+AGG 0.417490 4.2:-45106261 None:intergenic
GCTGTTGCTTCTATTTCTGC+TGG 0.418816 4.2:+45104152 MS.gene08738:intron
GCAGCAGCCACACCTGCCCT+GGG 0.419494 4.2:-45106267 None:intergenic
CTTAAACGGTAAGGCCTTGT+GGG 0.430025 4.2:-45106290 None:intergenic
TCAATATTGCAATGTCTTGA+AGG 0.436075 4.2:-45104693 None:intergenic
TGCTGGTGCAGCTCTAATTA+GGG 0.437513 4.2:+45103687 MS.gene08738:CDS
GGTGGAAGAGCTTGAGAAGT+TGG 0.438321 4.2:+45104008 MS.gene08738:CDS
GCTGGAAATGATGAGTTGAT+TGG 0.440283 4.2:+45104170 MS.gene08738:CDS
AACAAGAAGGCCCAAATCAC+TGG 0.445601 4.2:-45105037 None:intergenic
TACCTCGGGGTCCGAGAGTA+AGG 0.449271 4.2:-45102912 None:intergenic
GCATAGCACGGCGTGAATCT+TGG 0.451358 4.2:-45102855 None:intergenic
AGGAGTGGTGAATGGGAGGT+TGG 0.455590 4.2:+45106096 MS.gene08738:CDS
AGAACGGAGAATTGAGGTTG+AGG 0.455957 4.2:-45102613 None:intergenic
GACAGACTCAGTTTACGATT+CGG 0.456644 4.2:+45105197 MS.gene08738:CDS
GGACTTCTCAGTGTGACATC+AGG 0.457635 4.2:+45103934 MS.gene08738:CDS
AGAAAATTAGGAGTGGTGAA+TGG 0.459333 4.2:+45106088 MS.gene08738:CDS
GCTGAAGCAATTGGCAAGGT+TGG 0.460825 4.2:+45104203 MS.gene08738:CDS
GGATGAGTTTGGCAGTCCTA+AGG 0.461802 4.2:+45103606 MS.gene08738:CDS
AAAAGATATAATTCCTCTGT+TGG 0.463003 4.2:+45104519 MS.gene08738:CDS
TGCTTATGTTCCAGCAATCA+AGG 0.463871 4.2:+45105401 MS.gene08738:CDS
TAATTAATCTAAAACTTAAA+CGG 0.464303 4.2:-45106304 None:intergenic
AGATTCACGCCGTGCTATGC+AGG 0.464712 4.2:+45102858 MS.gene08738:CDS
CATTCCTTCTTCGACTTCGA+CGG 0.464884 4.2:-45104273 None:intergenic
GAAAATTAGGAGTGGTGAAT+GGG 0.464921 4.2:+45106089 MS.gene08738:CDS
ACACCATCGTTTACAACCTT+AGG 0.465120 4.2:-45103622 None:intergenic
GCTCGGGAAATCATTAAGCT+TGG 0.465886 4.2:+45103913 MS.gene08738:CDS
TGCTGCTTCAGTGGCTGGGA+TGG 0.468314 4.2:+45106206 MS.gene08738:CDS
AATAATAGTGGTAGAATCCT+TGG 0.468846 4.2:-45105109 None:intergenic
AGGAGCTGACATTGTTCAAA+AGG 0.472940 4.2:+45105452 MS.gene08738:CDS
TCAAGATTTGTAACAAATTG+GGG 0.473091 4.2:-45104433 None:intergenic
GCCTAAGCCCAGGGCAGGTG+TGG 0.478150 4.2:+45106260 MS.gene08738:CDS
CAAGACATTGCAATATTGAC+AGG 0.482708 4.2:+45104697 MS.gene08738:CDS
AAGTTTACGATCCTCAAGTT+CGG 0.483262 4.2:-45105292 None:intergenic
GAGAGGATCGCTAAATTGTC+TGG 0.483357 4.2:+45105231 MS.gene08738:CDS
GGTGTGGCTGCTGCCCCACA+AGG 0.483680 4.2:+45106276 MS.gene08738:CDS
TCACGCCGTGCTATGCAGGC+TGG 0.498346 4.2:+45102862 MS.gene08738:CDS
TAAAACAGTAGCGGCTTTGG+TGG 0.499019 4.2:+45103990 MS.gene08738:CDS
CTTTGCAGGGTCGATGACTC+CGG 0.499315 4.2:-45106160 None:intergenic
GATGCTGTTGGCCTTACTCT+CGG 0.499566 4.2:+45102901 MS.gene08738:CDS
CACTTGCTTTAACAGTAAAA+CGG 0.503145 4.2:-45102813 None:intergenic
GAAGGCCCAAATCACTGGCC+TGG 0.503715 4.2:-45105032 None:intergenic
AATAGAAGGTGAAGTAGTTG+TGG 0.504535 4.2:+45106065 MS.gene08738:CDS
TGTAATTAACCCTCCCATGT+TGG 0.504603 4.2:-45102777 None:intergenic
TGGTTAGTTACCTGGTTGGT+AGG 0.506460 4.2:-45102636 None:intergenic
ACTAATGACTCAGCTGGAGA+TGG 0.509296 4.2:+45103868 MS.gene08738:CDS
TTGAGGTGCTTTCAACAAGA+AGG 0.515520 4.2:-45105050 None:intergenic
TCATTGATTGCTCAAAATGC+TGG 0.518366 4.2:+45106042 MS.gene08738:CDS
TCTATGGATAAAACACCATC+AGG 0.519843 4.2:-45104227 None:intergenic
AGAATGCTGCTTCAGTGGCT+GGG 0.520388 4.2:+45106202 MS.gene08738:CDS
TATGAGAATTTAATTGACTC+CGG 0.523884 4.2:+45106141 MS.gene08738:CDS
ACAACCGTCGAAGTCGAAGA+AGG 0.524172 4.2:+45104269 MS.gene08738:CDS
TCCTGGAGGAGGTACTGCAT+TGG 0.524231 4.2:+45105368 MS.gene08738:CDS
CTTCGGCAATGATAAGCAAA+GGG 0.527412 4.2:-45104564 None:intergenic
TATTGAGTTACCTGATGCTA+TGG 0.527504 4.2:+45103660 MS.gene08738:CDS
TCTGCAGAATGCTGCTTCAG+TGG 0.527899 4.2:+45106197 MS.gene08738:CDS
AGCCTCACCAGTGATATCTT+CGG 0.529074 4.2:-45104581 None:intergenic
CAAACCGAGTTGTTCAATTG+AGG 0.529199 4.2:-45105067 None:intergenic
AATCTAAAACTTAAACGGTA+AGG 0.533828 4.2:-45106299 None:intergenic
AATCCTGTGTCAATCAAGAA+AGG 0.534087 4.2:+45103961 MS.gene08738:CDS
AGTAAAACTAATGACTCAGC+TGG 0.535745 4.2:+45103862 MS.gene08738:CDS
GGATCGTAAACTTAGAATTG+AGG 0.536649 4.2:+45105302 MS.gene08738:CDS
GGTAGGAGAACGGAGAATTG+AGG 0.536812 4.2:-45102619 None:intergenic
GTGGCTGCCATCAAAGCTCC+AGG 0.538427 4.2:+45104646 MS.gene08738:CDS
AGCAGGAAGGCGAACCAACA+TGG 0.541019 4.2:+45102763 MS.gene08738:CDS
ATTCCTTTCTTGATTGACAC+AGG 0.542961 4.2:-45103964 None:intergenic
ACAATGATTGCTGAAGCAAT+TGG 0.546352 4.2:+45104194 MS.gene08738:CDS
AGGCACAAACGAGTTTAAGC+AGG 0.547883 4.2:+45102746 MS.gene08738:intron
GAAAAGCCTAAGCCCAGGGC+AGG 0.551086 4.2:+45106255 MS.gene08738:CDS
TGAGGTTGAGGATAGAGCGT+TGG 0.551901 4.2:-45102601 None:intergenic
TATTGCTGATGCTGCATCAA+AGG 0.553754 4.2:+45105128 MS.gene08738:CDS
ACTTAAACGGTAAGGCCTTG+TGG 0.553935 4.2:-45106291 None:intergenic
GAAGGTATTGTTCCTGGAGG+AGG 0.556257 4.2:+45105357 MS.gene08738:CDS
GATAAACTTGCTGATGCTGT+TGG 0.556730 4.2:+45102889 MS.gene08738:CDS
AAAGGATGAGTTGCAATCTA+GGG 0.556934 4.2:+45105146 MS.gene08738:CDS
TTGTCGAAAAGCCTAAGCCC+AGG 0.559479 4.2:+45106250 MS.gene08738:CDS
CGTCGAAGTCGAAGAAGGAA+TGG 0.560458 4.2:+45104274 MS.gene08738:CDS
CAATTCCAGCCTGCATAGCA+CGG 0.564119 4.2:-45102867 None:intergenic
AGGATTTGGTGAGAGAAGAA+AGG 0.566687 4.2:+45104666 MS.gene08738:CDS
CACACCTTGTTACCTTTGCA+GGG 0.568256 4.2:-45106173 None:intergenic
CTAATGACTCAGCTGGAGAT+GGG 0.568805 4.2:+45103869 MS.gene08738:CDS
TGCAGCATCAGCAATAATAG+TGG 0.578409 4.2:-45105121 None:intergenic
ACCAATGCAGTACCTCCTCC+AGG 0.579777 4.2:-45105369 None:intergenic
GCAGGAAGGCGAACCAACAT+GGG 0.584017 4.2:+45102764 MS.gene08738:CDS
ATTGGCAAGGTTGGACCTGA+TGG 0.586040 4.2:+45104212 MS.gene08738:CDS
CACGCAGCTTGTTCACAACA+AGG 0.586245 4.2:-45104612 None:intergenic
AGGAACAATACCTTCCTCAA+TGG 0.588410 4.2:-45105349 None:intergenic
AATTAGGAGTGGTGAATGGG+AGG 0.589015 4.2:+45106092 MS.gene08738:CDS
TGGTGGAGTTGCAGTCATCA+AGG 0.589967 4.2:+45105251 MS.gene08738:CDS
CACTAGAAGACGCAGATGAG+AGG 0.592181 4.2:+45105427 MS.gene08738:CDS
AGTGGTAGAATCCTTGGAGA+TGG 0.595972 4.2:-45105103 None:intergenic
ATCATTGCCGAAGATATCAC+TGG 0.598076 4.2:+45104574 MS.gene08738:CDS
TCTTCGGCAATGATAAGCAA+AGG 0.598336 4.2:-45104565 None:intergenic
CCTGATGCTATGGAAAATGC+TGG 0.601164 4.2:+45103670 MS.gene08738:CDS
ATGACTTGTAGATTGACAGA+GGG 0.604162 4.2:+45104401 MS.gene08738:intron
TGCTACAGAGACCGAACTTG+AGG 0.605909 4.2:+45105281 MS.gene08738:CDS
CGGAGTCATCGACCCTGCAA+AGG 0.605948 4.2:+45106161 MS.gene08738:CDS
GAAATGGTTAGTTACCTGGT+TGG 0.606997 4.2:-45102640 None:intergenic
TCGACCCTGCAAAGGTAACA+AGG 0.607538 4.2:+45106169 MS.gene08738:CDS
ACGGCGTGAATCTTGGTCAA+AGG 0.607568 4.2:-45102848 None:intergenic
AAGAGCTTGAGAAGTTGGCT+AGG 0.608935 4.2:+45104013 MS.gene08738:CDS
TATTGCAATGTCTTGAAGGA+GGG 0.612191 4.2:-45104689 None:intergenic
GAAGACGCAGATGAGAGGCT+AGG 0.612286 4.2:+45105432 MS.gene08738:CDS
CAAGATTTGTAACAAATTGG+GGG 0.614790 4.2:-45104432 None:intergenic
TTGGCTAGGCCTGTTAAAGG+TGG 0.615079 4.2:+45104027 MS.gene08738:CDS
TCTCCGTTCTCCTACCAACC+AGG 0.616314 4.2:+45102626 MS.gene08738:CDS
AGACAATTTAGCGATCCTCT+CGG 0.616828 4.2:-45105229 None:intergenic
TTACCTGGTTGGTAGGAGAA+CGG 0.618698 4.2:-45102629 None:intergenic
GGAGTTGCAGTCATCAAGGT+CGG 0.619796 4.2:+45105255 MS.gene08738:CDS
CAAAGGGGCTCTCAATTGAG+TGG 0.620297 4.2:-45104548 None:intergenic
ATTCTCATAAGTGTCTGTCA+TGG 0.622423 4.2:-45106127 None:intergenic
AAGATTTGTAACAAATTGGG+GGG 0.629058 4.2:-45104431 None:intergenic
TTCGACAACAATGGCCTGTG+TGG 0.630520 4.2:-45106235 None:intergenic
GGAAGGCGAACCAACATGGG+AGG 0.631849 4.2:+45102767 MS.gene08738:CDS
GTTGTGGAGAAAATTAGGAG+TGG 0.632624 4.2:+45106081 MS.gene08738:CDS
ATATTGCAATGTCTTGAAGG+AGG 0.635052 4.2:-45104690 None:intergenic
TGCCGAAGATATCACTGGTG+AGG 0.639474 4.2:+45104579 MS.gene08738:CDS
AGGATCGCTAAATTGTCTGG+TGG 0.640845 4.2:+45105234 MS.gene08738:CDS
ATTCGGAGAAACTGGCCGAG+AGG 0.643581 4.2:+45105214 MS.gene08738:CDS
TCGAAAAGTGACCATCTCCA+AGG 0.643733 4.2:+45105092 MS.gene08738:CDS
AGCACCTCAATTGAACAACT+CGG 0.644633 4.2:+45105063 MS.gene08738:CDS
TATGACTTGTAGATTGACAG+AGG 0.649175 4.2:+45104400 MS.gene08738:intron
GGCCTTACTCTCGGACCCCG+AGG 0.649612 4.2:+45102910 MS.gene08738:CDS
TGTCGAAAAGCCTAAGCCCA+GGG 0.650837 4.2:+45106251 MS.gene08738:CDS
AGGAATTGATAAAACAGTAG+CGG 0.654535 4.2:+45103981 MS.gene08738:CDS
GAAGGCGAACCAACATGGGA+GGG 0.655547 4.2:+45102768 MS.gene08738:CDS
ACAAACGAGTTTAAGCAGGA+AGG 0.666712 4.2:+45102750 MS.gene08738:CDS
GATTGCTGAAGCAATTGGCA+AGG 0.668567 4.2:+45104199 MS.gene08738:CDS
AGTCCTAAGGTTGTAAACGA+TGG 0.671771 4.2:+45103619 MS.gene08738:CDS
GCTGCGTGGTATCCTTAATG+TGG 0.674392 4.2:+45104627 MS.gene08738:CDS
TTAAACGGTAAGGCCTTGTG+GGG 0.676362 4.2:-45106289 None:intergenic
GACGGTTGTCTCAAACGAGG+AGG 0.683850 4.2:-45104255 None:intergenic
CGAAGTCGAAGAAGGAATGG+AGG 0.684643 4.2:+45104277 MS.gene08738:CDS
AGCTGGAGATGGGACTACAA+CGG 0.691077 4.2:+45103879 MS.gene08738:CDS
TGGTGCAGCTCTAATTAGGG+AGG 0.702507 4.2:+45103690 MS.gene08738:CDS
ACGCAGCTTGTTCACAACAA+GGG 0.703024 4.2:-45104611 None:intergenic
GAGGAAGGTATTGTTCCTGG+AGG 0.714595 4.2:+45105354 MS.gene08738:CDS
TGGGATGGTCTTGACCACAC+AGG 0.718657 4.2:+45106221 MS.gene08738:CDS
TTCGGCAATGATAAGCAAAG+GGG 0.721019 4.2:-45104563 None:intergenic
CTTGTTGTGAACAAGCTGCG+TGG 0.747846 4.2:+45104613 MS.gene08738:CDS
TTCGACGGTTGTCTCAAACG+AGG 0.759858 4.2:-45104258 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATGAAAATGAATGA+AGG - chr4.2:45102667-45102686 None:intergenic 15.0%
!! ATTAAATGAAAATGAATGAA+GGG - chr4.2:45102666-45102685 None:intergenic 15.0%
!! TGTTTAATCATGTTAAATAA+TGG + chr4.2:45104814-45104833 MS.gene08738:intron 15.0%
!!! TAGTATTATTGCTATTATAT+GGG + chr4.2:45103526-45103545 MS.gene08738:intron 15.0%
!!! TATTCTTTTTTTGTTTGAAT+CGG + chr4.2:45103788-45103807 MS.gene08738:intron 15.0%
!!! TTAGTATTATTGCTATTATA+TGG + chr4.2:45103525-45103544 MS.gene08738:intron 15.0%
!! AAAAAGGGATGAAAAATAAA+TGG - chr4.2:45105914-45105933 None:intergenic 20.0%
!! AAAAGCAATAAAATTAGAAG+TGG - chr4.2:45104381-45104400 None:intergenic 20.0%
!! AAATAATATCAACATTTCCA+GGG + chr4.2:45105666-45105685 MS.gene08738:intron 20.0%
!! ATTGTTGTAAATTGTAATCA+TGG - chr4.2:45105546-45105565 None:intergenic 20.0%
!! GCTTGAAACATTAATTTATA+AGG - chr4.2:45105704-45105723 None:intergenic 20.0%
!! TACATTTCAAAAAGATACAT+GGG - chr4.2:45103409-45103428 None:intergenic 20.0%
!! TACTATAAGAACATTTGATT+TGG + chr4.2:45104074-45104093 MS.gene08738:intron 20.0%
!! TTAAATGAAAATGAATGAAG+GGG - chr4.2:45102665-45102684 None:intergenic 20.0%
!! TTGAATGTAATTATATGTGT+TGG + chr4.2:45102952-45102971 MS.gene08738:intron 20.0%
!!! AAAGTAATATCAACATTTTC+AGG + chr4.2:45105747-45105766 MS.gene08738:intron 20.0%
!!! AGGAATTATATCTTTTATTG+CGG - chr4.2:45104515-45104534 None:intergenic 20.0%
!!! ATATTGATGAAGTTTTGATA+GGG - chr4.2:45105940-45105959 None:intergenic 20.0%
!!! CATAAACTAAATTTTTGAAC+AGG - chr4.2:45104845-45104864 None:intergenic 20.0%
!!! GTTGTTTTAATAAACTATAC+CGG + chr4.2:45103256-45103275 MS.gene08738:intron 20.0%
!!! TGAATCTGAATGTATTTTTT+CGG + chr4.2:45103108-45103127 MS.gene08738:intron 20.0%
!!! TTAATGATAATCGATTTTGT+AGG - chr4.2:45102707-45102726 None:intergenic 20.0%
!!! TTTGAAGATTTTTGTGTATA+TGG + chr4.2:45103757-45103776 MS.gene08738:intron 20.0%
!!! TTTTTTTTTTTTTTGAAGGG+AGG + chr4.2:45103572-45103591 MS.gene08738:intron 20.0%
! AAAAGATATAATTCCTCTGT+TGG + chr4.2:45104519-45104538 MS.gene08738:CDS 25.0%
! AAACAATAATCATAGCATAC+TGG - chr4.2:45105511-45105530 None:intergenic 25.0%
! ACTCAAATTATCATATACCT+CGG - chr4.2:45102930-45102949 None:intergenic 25.0%
! ATAAGCTCAAATAAGCTAAT+CGG + chr4.2:45103377-45103396 MS.gene08738:intron 25.0%
! CAAATAATATCAACATTTCC+AGG + chr4.2:45105665-45105684 MS.gene08738:intron 25.0%
! CTCAAGATTTGTAACAAATT+GGG - chr4.2:45104437-45104456 None:intergenic 25.0%
! GAGAGTTTATGTAAATAATC+TGG + chr4.2:45103278-45103297 MS.gene08738:intron 25.0%
! GATTATTTACATAAACTCTC+CGG - chr4.2:45103278-45103297 None:intergenic 25.0%
! GTACATTTCAAAAAGATACA+TGG - chr4.2:45103410-45103429 None:intergenic 25.0%
! TCAAGATTTGTAACAAATTG+GGG - chr4.2:45104436-45104455 None:intergenic 25.0%
! TCTCAAGATTTGTAACAAAT+TGG - chr4.2:45104438-45104457 None:intergenic 25.0%
! TTCCAATTATAAACATTCAC+CGG - chr4.2:45104339-45104358 None:intergenic 25.0%
!! ATTTTCCGATTATTTGTTTC+AGG + chr4.2:45102726-45102745 MS.gene08738:intron 25.0%
!! TATGAGAATTTAATTGACTC+CGG + chr4.2:45106141-45106160 MS.gene08738:CDS 25.0%
!! TTTTCCTTTTGTCAATGTAT+AGG + chr4.2:45106002-45106021 MS.gene08738:intron 25.0%
!!! AAATGGATTTTCTTGAAAAC+TGG - chr4.2:45105897-45105916 None:intergenic 25.0%
!!! AGTTTTGATAGGGAAAAAAA+AGG - chr4.2:45105930-45105949 None:intergenic 25.0%
!!! ATTTTTTTAGAAATGTGAGG+TGG + chr4.2:45103445-45103464 MS.gene08738:intron 25.0%
!!! GATATTGATGAAGTTTTGAT+AGG - chr4.2:45105941-45105960 None:intergenic 25.0%
!!! GTTTTGATAGGGAAAAAAAA+GGG - chr4.2:45105929-45105948 None:intergenic 25.0%
!!! TAGACGTATTCATTGTTTTT+TGG + chr4.2:45104731-45104750 MS.gene08738:intron 25.0%
!!! TGATGTTGATTTAAAACTGA+AGG + chr4.2:45103834-45103853 MS.gene08738:intron 25.0%
!!! TGGATTTTTTTAGAAATGTG+AGG + chr4.2:45103442-45103461 MS.gene08738:intron 25.0%
AAAGGTGGAGATGATATAAA+AGG + chr4.2:45104042-45104061 MS.gene08738:CDS 30.0%
AAGATTTGTAACAAATTGGG+GGG - chr4.2:45104434-45104453 None:intergenic 30.0%
AAGTAGTTGTGGAGAAAATT+AGG + chr4.2:45106076-45106095 MS.gene08738:CDS 30.0%
AATAATAGTGGTAGAATCCT+TGG - chr4.2:45105112-45105131 None:intergenic 30.0%
AATGCCTATACATTGACAAA+AGG - chr4.2:45106009-45106028 None:intergenic 30.0%
AGGAATTGATAAAACAGTAG+CGG + chr4.2:45103981-45104000 MS.gene08738:CDS 30.0%
CAAACAAAGAAACAGAGTAT+GGG - chr4.2:45105794-45105813 None:intergenic 30.0%
CAAGATTTGTAACAAATTGG+GGG - chr4.2:45104435-45104454 None:intergenic 30.0%
CACTTGCTTTAACAGTAAAA+CGG - chr4.2:45102816-45102835 None:intergenic 30.0%
CTCAAATTATCATATACCTC+GGG - chr4.2:45102929-45102948 None:intergenic 30.0%
TCAAATTATCATATACCTCG+GGG - chr4.2:45102928-45102947 None:intergenic 30.0%
TCAATATTGCAATGTCTTGA+AGG - chr4.2:45104696-45104715 None:intergenic 30.0%
TCCAATTATAAACATTCACC+GGG - chr4.2:45104338-45104357 None:intergenic 30.0%
TGACTTTGGATTTGCATAAA+TGG + chr4.2:45103064-45103083 MS.gene08738:intron 30.0%
TGCAAGCATCATAATATATG+TGG + chr4.2:45104758-45104777 MS.gene08738:intron 30.0%
TTATATGTGTTGTCTCATAC+TGG + chr4.2:45103001-45103020 MS.gene08738:intron 30.0%
TTGTGCCTGAAACAAATAAT+CGG - chr4.2:45102734-45102753 None:intergenic 30.0%
! AAATGTACTTCTAGAAAGTG+TGG + chr4.2:45103422-45103441 MS.gene08738:intron 30.0%
! ATTTGACATCTTTTCTTTCC+CGG + chr4.2:45104317-45104336 MS.gene08738:intron 30.0%
! ATTTTGTAGGTAAGTGCTTT+TGG - chr4.2:45102694-45102713 None:intergenic 30.0%
! ATTTTGTGCATTTAACTGCT+AGG + chr4.2:45105000-45105019 MS.gene08738:intron 30.0%
! CATACTCTGTTTCTTTGTTT+GGG + chr4.2:45105793-45105812 MS.gene08738:intron 30.0%
! CTTTTATTGCGGAAATCTTT+TGG - chr4.2:45104504-45104523 None:intergenic 30.0%
! GGAGATGATATAAAAGGTAT+TGG + chr4.2:45104048-45104067 MS.gene08738:intron 30.0%
! TTTCTTTGTTTGGGTCAAAA+GGG + chr4.2:45105802-45105821 MS.gene08738:intron 30.0%
! TTTTGTAGGTAAGTGCTTTT+GGG - chr4.2:45102693-45102712 None:intergenic 30.0%
! TTTTGTCAATGTATAGGCAT+TGG + chr4.2:45106008-45106027 MS.gene08738:intron 30.0%
!!! AATGTTGTTTTGGATGAGTT+TGG + chr4.2:45103595-45103614 MS.gene08738:CDS 30.0%
!!! TCAACATTTTCAGGTTATTC+TGG + chr4.2:45105756-45105775 MS.gene08738:intron 30.0%
!!! TCTTTTTTTGTTTGAATCGG+TGG + chr4.2:45103791-45103810 MS.gene08738:intron 30.0%
AAACCTACATAGTACATGAC+TGG - chr4.2:45104790-45104809 None:intergenic 35.0%
AAAGGATGAGTTGCAATCTA+GGG + chr4.2:45105146-45105165 MS.gene08738:CDS 35.0%
AAGTTTACGATCCTCAAGTT+CGG - chr4.2:45105295-45105314 None:intergenic 35.0%
AATAAGCTCTCTTTCCAAAC+AGG - chr4.2:45103146-45103165 None:intergenic 35.0%
AATAGAAGGTGAAGTAGTTG+TGG + chr4.2:45106065-45106084 MS.gene08738:CDS 35.0%
AATCCTGTGTCAATCAAGAA+AGG + chr4.2:45103961-45103980 MS.gene08738:CDS 35.0%
ACAATGATTGCTGAAGCAAT+TGG + chr4.2:45104194-45104213 MS.gene08738:CDS 35.0%
AGAAAATTAGGAGTGGTGAA+TGG + chr4.2:45106088-45106107 MS.gene08738:CDS 35.0%
AGTAAAACTAATGACTCAGC+TGG + chr4.2:45103862-45103881 MS.gene08738:CDS 35.0%
ATAAGCTCTCTTTCCAAACA+GGG - chr4.2:45103145-45103164 None:intergenic 35.0%
ATATCATCTCCACCTTTAAC+AGG - chr4.2:45104039-45104058 None:intergenic 35.0%
ATATTGCAATGTCTTGAAGG+AGG - chr4.2:45104693-45104712 None:intergenic 35.0%
ATGATACAACAAAGAACCGA+TGG + chr4.2:45104932-45104951 MS.gene08738:intron 35.0%
ATTCCTTTCTTGATTGACAC+AGG - chr4.2:45103967-45103986 None:intergenic 35.0%
ATTCTCATAAGTGTCTGTCA+TGG - chr4.2:45106130-45106149 None:intergenic 35.0%
CAAGACATTGCAATATTGAC+AGG + chr4.2:45104697-45104716 MS.gene08738:CDS 35.0%
CCAAACAAAGAAACAGAGTA+TGG - chr4.2:45105795-45105814 None:intergenic 35.0%
GAAAACATGGAATGTGACTT+TGG + chr4.2:45103050-45103069 MS.gene08738:intron 35.0%
GAAAATGAATGAAGGGGAAA+TGG - chr4.2:45102659-45102678 None:intergenic 35.0%
GAAAATTAGGAGTGGTGAAT+GGG + chr4.2:45106089-45106108 MS.gene08738:CDS 35.0%
GGATCGTAAACTTAGAATTG+AGG + chr4.2:45105302-45105321 MS.gene08738:CDS 35.0%
GTGCTTACAGTGTAAATTTG+TGG - chr4.2:45105646-45105665 None:intergenic 35.0%
TAGCATGACATTACAACAAC+TGG - chr4.2:45104111-45104130 None:intergenic 35.0%
TATTGAGTTACCTGATGCTA+TGG + chr4.2:45103660-45103679 MS.gene08738:CDS 35.0%
TATTGCAATGTCTTGAAGGA+GGG - chr4.2:45104692-45104711 None:intergenic 35.0%
TCCCGGTGAATGTTTATAAT+TGG + chr4.2:45104334-45104353 MS.gene08738:intron 35.0%
TCTATGGATAAAACACCATC+AGG - chr4.2:45104230-45104249 None:intergenic 35.0%
TTCAAGCATCATATAACTCG+TGG + chr4.2:45105717-45105736 MS.gene08738:intron 35.0%
TTCTCTCAAATAGTGTCAGA+TGG + chr4.2:45103339-45103358 MS.gene08738:intron 35.0%
! ATCGGTTCTTTGTTGTATCA+TGG - chr4.2:45104933-45104952 None:intergenic 35.0%
! ATGACTTGTAGATTGACAGA+GGG + chr4.2:45104401-45104420 MS.gene08738:intron 35.0%
! CCATACTCTGTTTCTTTGTT+TGG + chr4.2:45105792-45105811 MS.gene08738:intron 35.0%
! GTTTCTTTGTTTGGGTCAAA+AGG + chr4.2:45105801-45105820 MS.gene08738:intron 35.0%
! TATGACTTGTAGATTGACAG+AGG + chr4.2:45104400-45104419 MS.gene08738:intron 35.0%
! TATTGCGGAAATCTTTTGGT+CGG - chr4.2:45104500-45104519 None:intergenic 35.0%
! TCATTGATTGCTCAAAATGC+TGG + chr4.2:45106042-45106061 MS.gene08738:CDS 35.0%
! TTCTTTGTTTGGGTCAAAAG+GGG + chr4.2:45105803-45105822 MS.gene08738:intron 35.0%
! TTGTTTGAATCGGTGGTTTT+TGG + chr4.2:45103798-45103817 MS.gene08738:intron 35.0%
! TTTTGAGCAATCAATGATGC+AGG - chr4.2:45106039-45106058 None:intergenic 35.0%
!!! GGAAAGAGAGCTTATTTTGT+AGG + chr4.2:45103150-45103169 MS.gene08738:intron 35.0%
AACTTGTGTTTCCTTGCCAT+CGG - chr4.2:45104951-45104970 None:intergenic 40.0%
ACAAACGAGTTTAAGCAGGA+AGG + chr4.2:45102750-45102769 MS.gene08738:CDS 40.0%
ACACCATCGTTTACAACCTT+AGG - chr4.2:45103625-45103644 None:intergenic 40.0%
AGACAATTTAGCGATCCTCT+CGG - chr4.2:45105232-45105251 None:intergenic 40.0%
AGCACCTCAATTGAACAACT+CGG + chr4.2:45105063-45105082 MS.gene08738:CDS 40.0%
AGGAACAATACCTTCCTCAA+TGG - chr4.2:45105352-45105371 None:intergenic 40.0%
AGGAGCTGACATTGTTCAAA+AGG + chr4.2:45105452-45105471 MS.gene08738:CDS 40.0%
AGTCCTAAGGTTGTAAACGA+TGG + chr4.2:45103619-45103638 MS.gene08738:CDS 40.0%
ATCATTGCCGAAGATATCAC+TGG + chr4.2:45104574-45104593 MS.gene08738:CDS 40.0%
CAAACCGAGTTGTTCAATTG+AGG - chr4.2:45105070-45105089 None:intergenic 40.0%
CAAAGGATGAGTTGCAATCT+AGG + chr4.2:45105145-45105164 MS.gene08738:CDS 40.0%
CTCAATTGAACAACTCGGTT+TGG + chr4.2:45105068-45105087 MS.gene08738:CDS 40.0%
CTGATGCGTTAGTGAAAACA+TGG + chr4.2:45103037-45103056 MS.gene08738:intron 40.0%
CTTCGGCAATGATAAGCAAA+GGG - chr4.2:45104567-45104586 None:intergenic 40.0%
GACAGACTCAGTTTACGATT+CGG + chr4.2:45105197-45105216 MS.gene08738:CDS 40.0%
GCTCAAAATGCTGGAATAGA+AGG + chr4.2:45106051-45106070 MS.gene08738:CDS 40.0%
GGATAAAATGTTGCCCTGTT+TGG + chr4.2:45103129-45103148 MS.gene08738:intron 40.0%
GTTGTGGAGAAAATTAGGAG+TGG + chr4.2:45106081-45106100 MS.gene08738:CDS 40.0%
TAAGGTAAACCAGAATACCC+TGG - chr4.2:45105686-45105705 None:intergenic 40.0%
TATTGCTGATGCTGCATCAA+AGG + chr4.2:45105128-45105147 MS.gene08738:CDS 40.0%
TCTAGTGTTTCCTTGATTGC+TGG - chr4.2:45105414-45105433 None:intergenic 40.0%
TCTTCGGCAATGATAAGCAA+AGG - chr4.2:45104568-45104587 None:intergenic 40.0%
TGATAAAACAGTAGCGGCTT+TGG + chr4.2:45103987-45104006 MS.gene08738:CDS 40.0%
TGCAGCATCAGCAATAATAG+TGG - chr4.2:45105124-45105143 None:intergenic 40.0%
TGCTTATGTTCCAGCAATCA+AGG + chr4.2:45105401-45105420 MS.gene08738:CDS 40.0%
TGTAATTAACCCTCCCATGT+TGG - chr4.2:45102780-45102799 None:intergenic 40.0%
TGTCCAGTCATGTACTATGT+AGG + chr4.2:45104784-45104803 MS.gene08738:intron 40.0%
TTCGGCAATGATAAGCAAAG+GGG - chr4.2:45104566-45104585 None:intergenic 40.0%
TTTCTTCTCTCACCAAATCC+TGG - chr4.2:45104667-45104686 None:intergenic 40.0%
! AGTTTACGATTCGGAGAAAC+TGG + chr4.2:45105206-45105225 MS.gene08738:CDS 40.0%
! CTTAGGCTTTTCGACAACAA+TGG - chr4.2:45106247-45106266 None:intergenic 40.0%
! GAAATGGTTAGTTACCTGGT+TGG - chr4.2:45102643-45102662 None:intergenic 40.0%
! TCAACATTTCCAGGGTATTC+TGG + chr4.2:45105674-45105693 MS.gene08738:intron 40.0%
! TTGAGGTGCTTTCAACAAGA+AGG - chr4.2:45105053-45105072 None:intergenic 40.0%
!! AGGATTTGGTGAGAGAAGAA+AGG + chr4.2:45104666-45104685 MS.gene08738:CDS 40.0%
!! ATTGAGGAAGGTATTGTTCC+TGG + chr4.2:45105351-45105370 MS.gene08738:CDS 40.0%
!! GATAAACTTGCTGATGCTGT+TGG + chr4.2:45102889-45102908 MS.gene08738:CDS 40.0%
!! GCTGGAAATGATGAGTTGAT+TGG + chr4.2:45104170-45104189 MS.gene08738:CDS 40.0%
!! TGAAGGGAGGAATGTTGTTT+TGG + chr4.2:45103585-45103604 MS.gene08738:intron 40.0%
AAACGAGGAGGAAGACTCTA+TGG - chr4.2:45104246-45104265 None:intergenic 45.0%
AACAAGAAGGCCCAAATCAC+TGG - chr4.2:45105040-45105059 None:intergenic 45.0%
AAGAGCTTGAGAAGTTGGCT+AGG + chr4.2:45104013-45104032 MS.gene08738:CDS 45.0%
AAGTTGGCTAGGCCTGTTAA+AGG + chr4.2:45104024-45104043 MS.gene08738:CDS 45.0%
AATTAGGAGTGGTGAATGGG+AGG + chr4.2:45106092-45106111 MS.gene08738:CDS 45.0%
ACAACAAAGAACCGATGGCA+AGG + chr4.2:45104937-45104956 MS.gene08738:intron 45.0%
ACTAATGACTCAGCTGGAGA+TGG + chr4.2:45103868-45103887 MS.gene08738:CDS 45.0%
AGAACGGAGAATTGAGGTTG+AGG - chr4.2:45102616-45102635 None:intergenic 45.0%
AGATATCACTGGTGAGGCTT+TGG + chr4.2:45104585-45104604 MS.gene08738:CDS 45.0%
AGCCTCACCAGTGATATCTT+CGG - chr4.2:45104584-45104603 None:intergenic 45.0%
AGGATCGCTAAATTGTCTGG+TGG + chr4.2:45105234-45105253 MS.gene08738:CDS 45.0%
AGGCACAAACGAGTTTAAGC+AGG + chr4.2:45102746-45102765 MS.gene08738:intron 45.0%
AGTGGTAGAATCCTTGGAGA+TGG - chr4.2:45105106-45105125 None:intergenic 45.0%
CACACCTTGTTACCTTTGCA+GGG - chr4.2:45106176-45106195 None:intergenic 45.0%
CATTCCTTCTTCGACTTCGA+CGG - chr4.2:45104276-45104295 None:intergenic 45.0%
CCTGATGCTATGGAAAATGC+TGG + chr4.2:45103670-45103689 MS.gene08738:CDS 45.0%
CTAATGACTCAGCTGGAGAT+GGG + chr4.2:45103869-45103888 MS.gene08738:CDS 45.0%
GAGAGGATCGCTAAATTGTC+TGG + chr4.2:45105231-45105250 MS.gene08738:CDS 45.0%
GATTGCTGAAGCAATTGGCA+AGG + chr4.2:45104199-45104218 MS.gene08738:CDS 45.0%
GCTCGGGAAATCATTAAGCT+TGG + chr4.2:45103913-45103932 MS.gene08738:CDS 45.0%
GGCAGCAAAAGTTGCATTCT+TGG - chr4.2:45105331-45105350 None:intergenic 45.0%
TCGAAAAGTGACCATCTCCA+AGG + chr4.2:45105092-45105111 MS.gene08738:CDS 45.0%
TGGCAAGGAAACACAAGTTG+TGG + chr4.2:45104952-45104971 MS.gene08738:intron 45.0%
! ACCAAATCCTGGAGCTTTGA+TGG - chr4.2:45104656-45104675 None:intergenic 45.0%
! ACGCAGCTTGTTCACAACAA+GGG - chr4.2:45104614-45104633 None:intergenic 45.0%
! ACTTTTGCTGCCATTGAGGA+AGG + chr4.2:45105339-45105358 MS.gene08738:CDS 45.0%
! AGGGGAAATGGTTAGTTACC+TGG - chr4.2:45102647-45102666 None:intergenic 45.0%
! ATGCTGGTGCAGCTCTAATT+AGG + chr4.2:45103686-45103705 MS.gene08738:CDS 45.0%
! CCAGCATTTTCCATAGCATC+AGG - chr4.2:45103673-45103692 None:intergenic 45.0%
! CTTTGATGGCAGCCACATTA+AGG - chr4.2:45104642-45104661 None:intergenic 45.0%
! GACTACAACGGCTTCGATTT+TGG + chr4.2:45103891-45103910 MS.gene08738:CDS 45.0%
! GTGTCAGATGGTGTTTCTGT+CGG + chr4.2:45103351-45103370 MS.gene08738:intron 45.0%
! TAAAACAGTAGCGGCTTTGG+TGG + chr4.2:45103990-45104009 MS.gene08738:CDS 45.0%
! TGAGTGGTTTTCTCCAACAG+AGG - chr4.2:45104535-45104554 None:intergenic 45.0%
! TGCAACTTTTGCTGCCATTG+AGG + chr4.2:45105335-45105354 MS.gene08738:CDS 45.0%
! TGCTGGTGCAGCTCTAATTA+GGG + chr4.2:45103687-45103706 MS.gene08738:CDS 45.0%
! TGGAGGTATGAACTCTTTGC+TGG + chr4.2:45104294-45104313 MS.gene08738:intron 45.0%
! TGGTTAGTTACCTGGTTGGT+AGG - chr4.2:45102639-45102658 None:intergenic 45.0%
! TTAAACGGTAAGGCCTTGTG+GGG - chr4.2:45106292-45106311 None:intergenic 45.0%
!! GCTGTTGCTTCTATTTCTGC+TGG + chr4.2:45104152-45104171 MS.gene08738:intron 45.0%
!! TTACCTGGTTGGTAGGAGAA+CGG - chr4.2:45102632-45102651 None:intergenic 45.0%
!! ATTTATTTATTTATATAAAG+AGG - chr4.2:45103481-45103500 None:intergenic 5.0%
!! TTTATTTATTTATATAAAGA+GGG - chr4.2:45103480-45103499 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+GGG + chr4.2:45103569-45103588 MS.gene08738:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+AGG + chr4.2:45103568-45103587 MS.gene08738:intron 5.0%
ACAACCGTCGAAGTCGAAGA+AGG + chr4.2:45104269-45104288 MS.gene08738:CDS 50.0%
ACGGCGTGAATCTTGGTCAA+AGG - chr4.2:45102851-45102870 None:intergenic 50.0%
AGCTGGAGATGGGACTACAA+CGG + chr4.2:45103879-45103898 MS.gene08738:CDS 50.0%
ATTGGCAAGGTTGGACCTGA+TGG + chr4.2:45104212-45104231 MS.gene08738:CDS 50.0%
CAAAGGGGCTCTCAATTGAG+TGG - chr4.2:45104551-45104570 None:intergenic 50.0%
CAATTCCAGCCTGCATAGCA+CGG - chr4.2:45102870-45102889 None:intergenic 50.0%
CACTAGAAGACGCAGATGAG+AGG + chr4.2:45105427-45105446 MS.gene08738:CDS 50.0%
CGAAGTCGAAGAAGGAATGG+AGG + chr4.2:45104277-45104296 MS.gene08738:CDS 50.0%
CGTCGAAGTCGAAGAAGGAA+TGG + chr4.2:45104274-45104293 MS.gene08738:CDS 50.0%
GAGTTCCAGGCCAGTGATTT+GGG + chr4.2:45105027-45105046 MS.gene08738:CDS 50.0%
GCACACCTTGTTACCTTTGC+AGG - chr4.2:45106177-45106196 None:intergenic 50.0%
GCCATCAAAGCTCCAGGATT+TGG + chr4.2:45104652-45104671 MS.gene08738:CDS 50.0%
GCTGAAGCAATTGGCAAGGT+TGG + chr4.2:45104203-45104222 MS.gene08738:CDS 50.0%
GCTGCGTGGTATCCTTAATG+TGG + chr4.2:45104627-45104646 MS.gene08738:CDS 50.0%
GGACTTCTCAGTGTGACATC+AGG + chr4.2:45103934-45103953 MS.gene08738:CDS 50.0%
GGAGTTGCAGTCATCAAGGT+CGG + chr4.2:45105255-45105274 MS.gene08738:CDS 50.0%
GGATGAGTTTGGCAGTCCTA+AGG + chr4.2:45103606-45103625 MS.gene08738:CDS 50.0%
GGTAGGAGAACGGAGAATTG+AGG - chr4.2:45102622-45102641 None:intergenic 50.0%
GGTGGAAGAGCTTGAGAAGT+TGG + chr4.2:45104008-45104027 MS.gene08738:CDS 50.0%
TCGACCCTGCAAAGGTAACA+AGG + chr4.2:45106169-45106188 MS.gene08738:CDS 50.0%
TGAGGTTGAGGATAGAGCGT+TGG - chr4.2:45102604-45102623 None:intergenic 50.0%
TGAGTTCCAGGCCAGTGATT+TGG + chr4.2:45105026-45105045 MS.gene08738:CDS 50.0%
TGCCGAAGATATCACTGGTG+AGG + chr4.2:45104579-45104598 MS.gene08738:CDS 50.0%
TGCTACAGAGACCGAACTTG+AGG + chr4.2:45105281-45105300 MS.gene08738:CDS 50.0%
TGGTGGAGTTGCAGTCATCA+AGG + chr4.2:45105251-45105270 MS.gene08738:CDS 50.0%
TGTCGAAAAGCCTAAGCCCA+GGG + chr4.2:45106251-45106270 MS.gene08738:CDS 50.0%
TTCGACAACAATGGCCTGTG+TGG - chr4.2:45106238-45106257 None:intergenic 50.0%
TTCGACGGTTGTCTCAAACG+AGG - chr4.2:45104261-45104280 None:intergenic 50.0%
TTGGCTAGGCCTGTTAAAGG+TGG + chr4.2:45104027-45104046 MS.gene08738:CDS 50.0%
TTGTCGAAAAGCCTAAGCCC+AGG + chr4.2:45106250-45106269 MS.gene08738:CDS 50.0%
! AGAATGCTGCTTCAGTGGCT+GGG + chr4.2:45106202-45106221 MS.gene08738:CDS 50.0%
! CACGCAGCTTGTTCACAACA+AGG - chr4.2:45104615-45104634 None:intergenic 50.0%
! CTTGTTGTGAACAAGCTGCG+TGG + chr4.2:45104613-45104632 MS.gene08738:CDS 50.0%
! TCTGCAGAATGCTGCTTCAG+TGG + chr4.2:45106197-45106216 MS.gene08738:CDS 50.0%
! TGGTGCAGCTCTAATTAGGG+AGG + chr4.2:45103690-45103709 MS.gene08738:CDS 50.0%
!! GAAGGTATTGTTCCTGGAGG+AGG + chr4.2:45105357-45105376 MS.gene08738:CDS 50.0%
!! GAGGAAGGTATTGTTCCTGG+AGG + chr4.2:45105354-45105373 MS.gene08738:CDS 50.0%
!! GATGCTGTTGGCCTTACTCT+CGG + chr4.2:45102901-45102920 MS.gene08738:CDS 50.0%
!!! AACGGCTTCGATTTTGGCTC+GGG + chr4.2:45103897-45103916 MS.gene08738:CDS 50.0%
!!! CAACGGCTTCGATTTTGGCT+CGG + chr4.2:45103896-45103915 MS.gene08738:CDS 50.0%
ACCAATGCAGTACCTCCTCC+AGG - chr4.2:45105372-45105391 None:intergenic 55.0%
AGATTCACGCCGTGCTATGC+AGG + chr4.2:45102858-45102877 MS.gene08738:CDS 55.0%
AGCAGGAAGGCGAACCAACA+TGG + chr4.2:45102763-45102782 MS.gene08738:CDS 55.0%
AGGAGTGGTGAATGGGAGGT+TGG + chr4.2:45106096-45106115 MS.gene08738:CDS 55.0%
ATTCGGAGAAACTGGCCGAG+AGG + chr4.2:45105214-45105233 MS.gene08738:CDS 55.0%
CTTTGCAGGGTCGATGACTC+CGG - chr4.2:45106163-45106182 None:intergenic 55.0%
GAAGACGCAGATGAGAGGCT+AGG + chr4.2:45105432-45105451 MS.gene08738:CDS 55.0%
GAAGGCGAACCAACATGGGA+GGG + chr4.2:45102768-45102787 MS.gene08738:CDS 55.0%
GACGGTTGTCTCAAACGAGG+AGG - chr4.2:45104258-45104277 None:intergenic 55.0%
GCAGGAAGGCGAACCAACAT+GGG + chr4.2:45102764-45102783 MS.gene08738:CDS 55.0%
GCATAGCACGGCGTGAATCT+TGG - chr4.2:45102858-45102877 None:intergenic 55.0%
TCTCCGTTCTCCTACCAACC+AGG + chr4.2:45102626-45102645 MS.gene08738:CDS 55.0%
! CAGAATGCTGCTTCAGTGGC+TGG + chr4.2:45106201-45106220 MS.gene08738:CDS 55.0%
! TGGGATGGTCTTGACCACAC+AGG + chr4.2:45106221-45106240 MS.gene08738:CDS 55.0%
!! ACTGCTAGGTGCTGAGTTCC+AGG + chr4.2:45105014-45105033 MS.gene08738:intron 55.0%
!! TCCTGGAGGAGGTACTGCAT+TGG + chr4.2:45105368-45105387 MS.gene08738:CDS 55.0%
CGGAGTCATCGACCCTGCAA+AGG + chr4.2:45106161-45106180 MS.gene08738:CDS 60.0%
GAAAAGCCTAAGCCCAGGGC+AGG + chr4.2:45106255-45106274 MS.gene08738:CDS 60.0%
GAAGGCCCAAATCACTGGCC+TGG - chr4.2:45105035-45105054 None:intergenic 60.0%
GGAAGGCGAACCAACATGGG+AGG + chr4.2:45102767-45102786 MS.gene08738:CDS 60.0%
GTGGCTGCCATCAAAGCTCC+AGG + chr4.2:45104646-45104665 MS.gene08738:CDS 60.0%
TACCTCGGGGTCCGAGAGTA+AGG - chr4.2:45102915-45102934 None:intergenic 60.0%
! TGCTGCTTCAGTGGCTGGGA+TGG + chr4.2:45106206-45106225 MS.gene08738:CDS 60.0%
TCACGCCGTGCTATGCAGGC+TGG + chr4.2:45102862-45102881 MS.gene08738:CDS 65.0%
GCAGCAGCCACACCTGCCCT+GGG - chr4.2:45106270-45106289 None:intergenic 70.0%
GCCACACCTGCCCTGGGCTT+AGG - chr4.2:45106264-45106283 None:intergenic 70.0%
GCCTAAGCCCAGGGCAGGTG+TGG + chr4.2:45106260-45106279 MS.gene08738:CDS 70.0%
GGCCTTACTCTCGGACCCCG+AGG + chr4.2:45102910-45102929 MS.gene08738:CDS 70.0%
GGTGTGGCTGCTGCCCCACA+AGG + chr4.2:45106276-45106295 MS.gene08738:CDS 70.0%
GGCAGCAGCCACACCTGCCC+TGG - chr4.2:45106271-45106290 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 45102591 45106311 45102591 ID=MS.gene08738
chr4.2 mRNA 45102591 45106311 45102591 ID=MS.gene08738.t1;Parent=MS.gene08738
chr4.2 exon 45102591 45102647 45102591 ID=MS.gene08738.t1.exon1;Parent=MS.gene08738.t1
chr4.2 CDS 45102591 45102647 45102591 ID=cds.MS.gene08738.t1;Parent=MS.gene08738.t1
chr4.2 exon 45102748 45102931 45102748 ID=MS.gene08738.t1.exon2;Parent=MS.gene08738.t1
chr4.2 CDS 45102748 45102931 45102748 ID=cds.MS.gene08738.t1;Parent=MS.gene08738.t1
chr4.2 exon 45103590 45103711 45103590 ID=MS.gene08738.t1.exon3;Parent=MS.gene08738.t1
chr4.2 CDS 45103590 45103711 45103590 ID=cds.MS.gene08738.t1;Parent=MS.gene08738.t1
chr4.2 exon 45103856 45104063 45103856 ID=MS.gene08738.t1.exon4;Parent=MS.gene08738.t1
chr4.2 CDS 45103856 45104063 45103856 ID=cds.MS.gene08738.t1;Parent=MS.gene08738.t1
chr4.2 exon 45104153 45104298 45104153 ID=MS.gene08738.t1.exon5;Parent=MS.gene08738.t1
chr4.2 CDS 45104153 45104298 45104153 ID=cds.MS.gene08738.t1;Parent=MS.gene08738.t1
chr4.2 exon 45104412 45104718 45104412 ID=MS.gene08738.t1.exon6;Parent=MS.gene08738.t1
chr4.2 CDS 45104412 45104718 45104412 ID=cds.MS.gene08738.t1;Parent=MS.gene08738.t1
chr4.2 exon 45105022 45105473 45105022 ID=MS.gene08738.t1.exon7;Parent=MS.gene08738.t1
chr4.2 CDS 45105022 45105473 45105022 ID=cds.MS.gene08738.t1;Parent=MS.gene08738.t1
chr4.2 exon 45106024 45106311 45106024 ID=MS.gene08738.t1.exon8;Parent=MS.gene08738.t1
chr4.2 CDS 45106024 45106311 45106024 ID=cds.MS.gene08738.t1;Parent=MS.gene08738.t1
Gene Sequence

>MS.gene08738

ATGGCTTCAACCAACGCTCTATCCTCAACCTCAATTCTCCGTTCTCCTACCAACCAGGTAACTAACCATTTCCCCTTCATTCATTTTCATTTAATTTCTCCCAAAAGCACTTACCTACAAAATCGATTATCATTAATTTTCCGATTATTTGTTTCAGGCACAAACGAGTTTAAGCAGGAAGGCGAACCAACATGGGAGGGTTAATTACAGACAGAAAGTTAACCGTTTTACTGTTAAAGCAAGTGCTAAAGATATTGCCTTTGACCAAGATTCACGCCGTGCTATGCAGGCTGGAATTGATAAACTTGCTGATGCTGTTGGCCTTACTCTCGGACCCCGAGGTATATGATAATTTGAGTAATTGAATGTAATTATATGTGTTGGTGTCGTGTTCGAGTAATTGAGTGTAATTATATGTGTTGTCTCATACTGGACATGTCTTCAATCTGATGCGTTAGTGAAAACATGGAATGTGACTTTGGATTTGCATAAATGGAAAAACTCAAATTTGTGTGTATGAATCTGAATGTATTTTTTCGGATAAAATGTTGCCCTGTTTGGAAAGAGAGCTTATTTTGTAGGTTATAGCACATAAGCGCTTATGAATAAGCTATTTATGTGACACAAGATAAAATTGAGTCAAATTGTTTTCGTCTAATCTATAAGTTGTTTTAATAAACTATACCGGAGAGTTTATGTAAATAATCTGGAAATAGCTCATGAACATTTCATTAGCTGTTTTTGTAAGTTCTCTCAAATAGTGTCAGATGGTGTTTCTGTCGGTAGATAAGCTCAAATAAGCTAATCGGAACAGACCCATGTATCTTTTTGAAATGTACTTCTAGAAAGTGTGGATTTTTTTAGAAATGTGAGGTGGAAAATGTTTCCCTCTTTATATAAATAAATAAATAAATTGTCTTTTTATTCTGAAATTTTAGTATTATTGCTATTATATGGGTTAGCAATGTGAAACATTGTTTTTTTTTTTTTTTTTTGAAGGGAGGAATGTTGTTTTGGATGAGTTTGGCAGTCCTAAGGTTGTAAACGATGGTGTGACAATTGCAAGAGCTATTGAGTTACCTGATGCTATGGAAAATGCTGGTGCAGCTCTAATTAGGGAGGTATGTGATAATTGATAAATAAAGAGTTTAAATTATTTTGTTGCTTTTGAAGATTTTTGTGTATATGGTTTTTGATTATTCTTTTTTTGTTTGAATCGGTGGTTTTTGGTTACTTATGACGATGATGTTGATTTAAAACTGAAGGTTGCTAGTAAAACTAATGACTCAGCTGGAGATGGGACTACAACGGCTTCGATTTTGGCTCGGGAAATCATTAAGCTTGGACTTCTCAGTGTGACATCAGGTGCTAATCCTGTGTCAATCAAGAAAGGAATTGATAAAACAGTAGCGGCTTTGGTGGAAGAGCTTGAGAAGTTGGCTAGGCCTGTTAAAGGTGGAGATGATATAAAAGGTATTGGTATTACTATAAGAACATTTGATTTGGTTTCATTTTGACCAGTTGTTGTAATGTCATGCTAATGAGTTTTGATGTTGTATCAGCTGTTGCTTCTATTTCTGCTGGAAATGATGAGTTGATTGGAACAATGATTGCTGAAGCAATTGGCAAGGTTGGACCTGATGGTGTTTTATCCATAGAGTCTTCCTCCTCGTTTGAGACAACCGTCGAAGTCGAAGAAGGAATGGAGGTATGAACTCTTTGCTGGATTTGACATCTTTTCTTTCCCGGTGAATGTTTATAATTGGAAGAAAAGAGTTTTAAAGCTTCCACTTCTAATTTTATTGCTTTTATGACTTGTAGATTGACAGAGGGTATATCTCCCCCCAATTTGTTACAAATCTTGAGAAATCAATTGTTGAATTTGAGAATGCAAGAGTCTTGATTACCGACCAAAAGATTTCCGCAATAAAAGATATAATTCCTCTGTTGGAGAAAACCACTCAATTGAGAGCCCCTTTGCTTATCATTGCCGAAGATATCACTGGTGAGGCTTTGGCTACCCTTGTTGTGAACAAGCTGCGTGGTATCCTTAATGTGGCTGCCATCAAAGCTCCAGGATTTGGTGAGAGAAGAAAGGCCCTCCTTCAAGACATTGCAATATTGACAGGTATGTTAAATTTAGACGTATTCATTGTTTTTTGGATACTGCAAGCATCATAATATATGTGGTGATGTCCAGTCATGTACTATGTAGGTTTTTACTGTTTAATCATGTTAAATAATGGTTAATCCTGTTCAAAAATTTAGTTTATGTAAAAGAAGATATAGTCATTGTTTAGTTACTTTTGATATTTGTTTCAACTGTTTAAGTTATTCTGCCATGATACAACAAAGAACCGATGGCAAGGAAACACAAGTTGTGGAATTATCATAGACATTTCTTTGACAATTTTGTGCATTTAACTGCTAGGTGCTGAGTTCCAGGCCAGTGATTTGGGCCTTCTTGTTGAAAGCACCTCAATTGAACAACTCGGTTTGGCTCGAAAAGTGACCATCTCCAAGGATTCTACCACTATTATTGCTGATGCTGCATCAAAGGATGAGTTGCAATCTAGGGTTGCACAACTGAAGAAAGAGTTGTTTGAGACAGACTCAGTTTACGATTCGGAGAAACTGGCCGAGAGGATCGCTAAATTGTCTGGTGGAGTTGCAGTCATCAAGGTCGGTGCTGCTACAGAGACCGAACTTGAGGATCGTAAACTTAGAATTGAGGATGCCAAGAATGCAACTTTTGCTGCCATTGAGGAAGGTATTGTTCCTGGAGGAGGTACTGCATTGGTTCATCTCTCTGCTTATGTTCCAGCAATCAAGGAAACACTAGAAGACGCAGATGAGAGGCTAGGAGCTGACATTGTTCAAAAGGTGAGAATGCTGATCAAATTTGCACATATTTTGACCAGTATGCTATGATTATTGTTTTCATGTCATGTTCCATGATTACAATTTACAACAATCTGAAAAAACACAAATTTACACTATAAGCACAAATAATATCAACATTTTTCTTTACAATTTACAACAATCTGAAAAACCACAAATTTACACTGTAAGCACAAATAATATCAACATTTCCAGGGTATTCTGGTTTACCTTATAAATTAATGTTTCAAGCATCATATAACTCGTGGAAAAAATAAAGTAATATCAACATTTTCAGGTTATTCTGGTATATTGTTTATCCCATACTCTGTTTCTTTGTTTGGGTCAAAAGGGGAAAGAATAATTTTAAGATTTTATGAGTGTCACATTAGCAAAACAATTAAGTCAAAATGACTGTTATTTCCAGTTTTCAAGAAAATCCATTTATTTTTCATCCCTTTTTTTTCCCTATCAAAACTTCATCAATATCTGATATTTGATACGACTAAAAAATATTACTGATGAGTTGTTTTTTCCTTTTGTCAATGTATAGGCATTGGTAGCACCTGCATCATTGATTGCTCAAAATGCTGGAATAGAAGGTGAAGTAGTTGTGGAGAAAATTAGGAGTGGTGAATGGGAGGTTGGTTACAATGCCATGACAGACACTTATGAGAATTTAATTGACTCCGGAGTCATCGACCCTGCAAAGGTAACAAGGTGTGCTCTGCAGAATGCTGCTTCAGTGGCTGGGATGGTCTTGACCACACAGGCCATTGTTGTCGAAAAGCCTAAGCCCAGGGCAGGTGTGGCTGCTGCCCCACAAGGCCTTACCGTTTAA
Protein sequence

>MS.gene08738.t1

MASTNALSSTSILRSPTNQAQTSLSRKANQHGRVNYRQKVNRFTVKASAKDIAFDQDSRRAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVAALVEELEKLARPVKGGDDIKAVASISAGNDELIGTMIAEAIGKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNLEKSIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDITGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVESTSIEQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVPAIKETLEDADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKIRSGEWEVGYNAMTDTYENLIDSGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPRAGVAAAPQGLTV