Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08674.t1 | XP_013455979.1 | 99.8 | 587 | 1 | 0 | 1 | 587 | 1 | 587 | 8.3e-309 | 1068.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08674.t1 | P08926 | 95.4 | 587 | 27 | 0 | 1 | 587 | 1 | 587 | 3.0e-299 | 1028.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08674.t1 | I3SKN7 | 99.8 | 587 | 1 | 0 | 1 | 587 | 1 | 587 | 5.9e-309 | 1068.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene08674 | 0.872616 | 2.77E-67 | -1.69E-46 |
| MS.gene049351 | MS.gene08674 | 0.835159 | 1.97E-56 | -1.69E-46 |
| MS.gene049389 | MS.gene08674 | 0.803007 | 4.28E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene08674 | 0.838695 | 2.47E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene08674 | 0.840173 | 1.02E-57 | -1.69E-46 |
| MS.gene050076 | MS.gene08674 | 0.809084 | 2.25E-50 | -1.69E-46 |
| MS.gene050099 | MS.gene08674 | 0.932494 | 7.82E-95 | -1.69E-46 |
| MS.gene050301 | MS.gene08674 | 0.879309 | 1.38E-69 | -1.69E-46 |
| MS.gene050464 | MS.gene08674 | 0.802128 | 6.50E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene08674 | 0.842573 | 2.38E-58 | -1.69E-46 |
| MS.gene050642 | MS.gene08674 | 0.820577 | 6.37E-53 | -1.69E-46 |
| MS.gene050812 | MS.gene08674 | 0.810774 | 9.75E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene08674 | 0.863561 | 2.28E-64 | -1.69E-46 |
| MS.gene051240 | MS.gene08674 | 0.806844 | 6.75E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene08674 | 0.851015 | 1.17E-60 | -1.69E-46 |
| MS.gene051662 | MS.gene08674 | 0.879474 | 1.21E-69 | -1.69E-46 |
| MS.gene051663 | MS.gene08674 | 0.884869 | 1.33E-71 | -1.69E-46 |
| MS.gene051860 | MS.gene08674 | 0.808589 | 2.88E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene08674 | 0.843845 | 1.09E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene08674 | 0.825259 | 5.17E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene08674 | 0.811728 | 6.06E-51 | -1.69E-46 |
| MS.gene052207 | MS.gene08674 | 0.821597 | 3.71E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene08674 | 0.817086 | 3.96E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene08674 | 0.840267 | 9.64E-58 | -1.69E-46 |
| MS.gene052600 | MS.gene08674 | 0.849314 | 3.50E-60 | -1.69E-46 |
| MS.gene052789 | MS.gene08674 | 0.872312 | 3.50E-67 | -1.69E-46 |
| MS.gene053557 | MS.gene08674 | 0.821502 | 3.90E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene08674 | 0.879245 | 1.46E-69 | -1.69E-46 |
| MS.gene053907 | MS.gene08674 | 0.819768 | 9.77E-53 | -1.69E-46 |
| MS.gene053971 | MS.gene08674 | 0.812721 | 3.68E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene08674 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene08674 | 0.861492 | 9.87E-64 | -1.69E-46 |
| MS.gene054942 | MS.gene08674 | 0.872653 | 2.70E-67 | -1.69E-46 |
| MS.gene055277 | MS.gene08674 | 0.843907 | 1.05E-58 | -1.69E-46 |
| MS.gene055303 | MS.gene08674 | 0.808661 | 2.77E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene08674 | 0.875185 | 3.76E-68 | -1.69E-46 |
| MS.gene055422 | MS.gene08674 | 0.888774 | 4.38E-73 | -1.69E-46 |
| MS.gene055428 | MS.gene08674 | 0.863393 | 2.57E-64 | -1.69E-46 |
| MS.gene055971 | MS.gene08674 | 0.820148 | 7.99E-53 | -1.69E-46 |
| MS.gene056451 | MS.gene08674 | 0.818174 | 2.25E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene08674 | 0.844758 | 6.20E-59 | -1.69E-46 |
| MS.gene057121 | MS.gene08674 | 0.887373 | 1.51E-72 | -1.69E-46 |
| MS.gene057245 | MS.gene08674 | 0.831357 | 1.75E-55 | -1.69E-46 |
| MS.gene057260 | MS.gene08674 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene08674 | 0.802794 | 4.74E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene08674 | 0.861379 | 1.07E-63 | -1.69E-46 |
| MS.gene057450 | MS.gene08674 | 0.801398 | 9.18E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene08674 | 0.890654 | 8.11E-74 | -1.69E-46 |
| MS.gene05811 | MS.gene08674 | 0.903368 | 3.73E-79 | -1.69E-46 |
| MS.gene058142 | MS.gene08674 | 0.839269 | 1.75E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene08674 | 0.803115 | 4.07E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene08674 | 0.852189 | 5.44E-61 | -1.69E-46 |
| MS.gene058293 | MS.gene08674 | 0.818928 | 1.52E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene08674 | 0.848026 | 7.96E-60 | -1.69E-46 |
| MS.gene058749 | MS.gene08674 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene058833 | MS.gene08674 | 0.862363 | 5.34E-64 | -1.69E-46 |
| MS.gene058845 | MS.gene08674 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene08674 | 0.800819 | 1.20E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene08674 | 0.860376 | 2.16E-63 | -1.69E-46 |
| MS.gene059326 | MS.gene08674 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene08674 | 0.877094 | 8.27E-69 | -1.69E-46 |
| MS.gene059597 | MS.gene08674 | 0.841694 | 4.07E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene08674 | 0.825036 | 5.83E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene08674 | 0.803065 | 4.16E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene08674 | 0.850897 | 1.26E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene08674 | 0.854995 | 8.49E-62 | -1.69E-46 |
| MS.gene06037 | MS.gene08674 | 0.806138 | 9.51E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene08674 | 0.840725 | 7.31E-58 | -1.69E-46 |
| MS.gene060476 | MS.gene08674 | 0.822003 | 2.99E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene08674 | 0.808168 | 3.54E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene08674 | 0.828821 | 7.26E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011205 | MS.gene08674 | PPI |
| MS.gene24509 | MS.gene08674 | PPI |
| MS.gene051662 | MS.gene08674 | PPI |
| MS.gene21357 | MS.gene08674 | PPI |
| MS.gene78778 | MS.gene08674 | PPI |
| MS.gene051663 | MS.gene08674 | PPI |
| MS.gene07775 | MS.gene08674 | PPI |
| MS.gene005697 | MS.gene08674 | PPI |
| MS.gene006906 | MS.gene08674 | PPI |
| MS.gene067554 | MS.gene08674 | PPI |
| MS.gene00537 | MS.gene08674 | PPI |
| MS.gene21581 | MS.gene08674 | PPI |
| MS.gene24508 | MS.gene08674 | PPI |
| MS.gene08674 | MS.gene00537 | PPI |
| MS.gene08674 | MS.gene00538 | PPI |
| MS.gene66498 | MS.gene08674 | PPI |
| MS.gene005698 | MS.gene08674 | PPI |
| MS.gene045864 | MS.gene08674 | PPI |
| MS.gene21583 | MS.gene08674 | PPI |
| MS.gene37341 | MS.gene08674 | PPI |
| MS.gene00538 | MS.gene08674 | PPI |
| MS.gene66497 | MS.gene08674 | PPI |
| MS.gene21355 | MS.gene08674 | PPI |
| MS.gene053971 | MS.gene08674 | PPI |
| MS.gene56417 | MS.gene08674 | PPI |
| MS.gene071148 | MS.gene08674 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08674.t1 | MTR_4g057970 | 99.830 | 587 | 1 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1156 |
| MS.gene08674.t1 | MTR_4g084130 | 64.991 | 537 | 185 | 1 | 42 | 575 | 34 | 570 | 0.0 | 702 |
| MS.gene08674.t1 | MTR_4g084130 | 64.989 | 457 | 157 | 1 | 122 | 575 | 2 | 458 | 0.0 | 597 |
| MS.gene08674.t1 | MTR_1g017380 | 52.952 | 542 | 250 | 4 | 45 | 582 | 43 | 583 | 0.0 | 541 |
| MS.gene08674.t1 | MTR_1g017390 | 52.768 | 542 | 251 | 4 | 45 | 582 | 43 | 583 | 0.0 | 540 |
| MS.gene08674.t1 | MTR_1g090140 | 45.341 | 558 | 293 | 5 | 28 | 582 | 19 | 567 | 2.09e-159 | 468 |
| MS.gene08674.t1 | MTR_1g090130 | 45.422 | 557 | 293 | 5 | 22 | 572 | 6 | 557 | 3.86e-156 | 460 |
| MS.gene08674.t1 | MTR_8g017080 | 42.938 | 531 | 295 | 4 | 50 | 574 | 36 | 564 | 2.61e-141 | 422 |
| MS.gene08674.t1 | MTR_0991s0010 | 54.545 | 143 | 62 | 2 | 45 | 184 | 43 | 185 | 4.28e-43 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08674.t1 | AT2G28000 | 85.971 | 556 | 77 | 1 | 33 | 587 | 31 | 586 | 0.0 | 934 |
| MS.gene08674.t1 | AT5G18820 | 60.420 | 571 | 218 | 4 | 15 | 582 | 5 | 570 | 0.0 | 654 |
| MS.gene08674.t1 | AT5G56500 | 51.269 | 591 | 277 | 7 | 1 | 584 | 1 | 587 | 0.0 | 546 |
| MS.gene08674.t1 | AT5G56500 | 51.269 | 591 | 277 | 7 | 1 | 584 | 1 | 587 | 0.0 | 546 |
| MS.gene08674.t1 | AT5G18820 | 61.339 | 463 | 177 | 2 | 122 | 582 | 2 | 464 | 0.0 | 546 |
| MS.gene08674.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene08674.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene08674.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene08674.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene08674.t1 | AT1G55490 | 49.578 | 593 | 287 | 6 | 1 | 582 | 1 | 592 | 0.0 | 539 |
| MS.gene08674.t1 | AT3G13470 | 50.903 | 554 | 267 | 4 | 33 | 582 | 36 | 588 | 0.0 | 536 |
| MS.gene08674.t1 | AT1G26230 | 45.167 | 538 | 286 | 5 | 45 | 574 | 36 | 572 | 2.95e-161 | 474 |
| MS.gene08674.t1 | AT5G18820 | 59.806 | 413 | 160 | 2 | 15 | 426 | 5 | 412 | 3.04e-159 | 463 |
| MS.gene08674.t1 | AT1G26230 | 45.472 | 519 | 276 | 4 | 62 | 574 | 3 | 520 | 7.66e-157 | 461 |
| MS.gene08674.t1 | AT3G23990 | 44.523 | 566 | 301 | 6 | 12 | 573 | 1 | 557 | 4.39e-155 | 457 |
| MS.gene08674.t1 | AT1G26230 | 45.508 | 512 | 272 | 4 | 69 | 574 | 2 | 512 | 6.32e-155 | 456 |
| MS.gene08674.t1 | AT2G33210 | 43.772 | 578 | 300 | 5 | 4 | 577 | 6 | 562 | 9.95e-155 | 456 |
| MS.gene08674.t1 | AT2G33210 | 43.772 | 578 | 295 | 6 | 4 | 577 | 6 | 557 | 6.07e-152 | 449 |
| MS.gene08674.t1 | AT3G13860 | 43.916 | 526 | 291 | 3 | 48 | 571 | 32 | 555 | 1.60e-141 | 422 |
| MS.gene08674.t1 | AT1G26230 | 45.053 | 475 | 257 | 3 | 45 | 516 | 36 | 509 | 2.24e-141 | 421 |
| MS.gene08674.t1 | AT1G26230 | 44.226 | 407 | 223 | 3 | 45 | 448 | 36 | 441 | 3.23e-117 | 356 |
Find 168 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAAGATTTGTAACAAAT+TGG | 0.150058 | 4.4:-45293069 | None:intergenic |
| GGCAGCAAAAGTTGCATTCT+TGG | 0.207810 | 4.4:-45293962 | None:intergenic |
| GACTACAACGGCTTCGATTT+TGG | 0.214195 | 4.4:+45292525 | MS.gene08674:CDS |
| ATGCTGGTGCAGCTCTAATT+AGG | 0.223973 | 4.4:+45292320 | MS.gene08674:CDS |
| GGCAGCAGCCACAGCTGCCC+TGG | 0.235751 | 4.4:-45294843 | None:intergenic |
| GAGTTCCAGGCCAGTGATTT+GGG | 0.275875 | 4.4:+45293661 | MS.gene08674:CDS |
| CTCAAGATTTGTAACAAATT+GGG | 0.277700 | 4.4:-45293068 | None:intergenic |
| TGAGTTCCAGGCCAGTGATT+TGG | 0.282182 | 4.4:+45293660 | MS.gene08674:CDS |
| CAGAATGCTGCTTCAGTGGC+TGG | 0.296833 | 4.4:+45294776 | MS.gene08674:CDS |
| ACTGCTAGGTGCTGAGTTCC+AGG | 0.304928 | 4.4:+45293648 | MS.gene08674:intron |
| ATATCATCTCCACCTTTAAC+AGG | 0.315746 | 4.4:-45292670 | None:intergenic |
| TTCAATTGAACAACTTGGTT+TGG | 0.329096 | 4.4:+45293702 | MS.gene08674:CDS |
| CTTTGATGGCAGCCACATTA+AGG | 0.329763 | 4.4:-45293273 | None:intergenic |
| AAAGGTGGAGATGATATAAA+AGG | 0.339200 | 4.4:+45292676 | MS.gene08674:CDS |
| AGTTTACGACTCGGAGAAAC+TGG | 0.348292 | 4.4:+45293840 | MS.gene08674:CDS |
| TATGAGAATTTAATTGAGTC+TGG | 0.349270 | 4.4:+45294716 | MS.gene08674:CDS |
| GCCATCAAAGCTCCAGGATT+TGG | 0.350317 | 4.4:+45293286 | MS.gene08674:CDS |
| TGATAAAACAGTAGCGGCTT+TGG | 0.352770 | 4.4:+45292621 | MS.gene08674:CDS |
| AAGTTGGCTAGGCCTGTTAA+AGG | 0.361241 | 4.4:+45292658 | MS.gene08674:CDS |
| GCCACAGCTGCCCTGGGCTT+AGG | 0.362312 | 4.4:-45294836 | None:intergenic |
| TGAAGGGAGGAATGTTGTTT+TGG | 0.363805 | 4.4:+45292219 | MS.gene08674:intron |
| GCAGCAGCCACAGCTGCCCT+GGG | 0.364316 | 4.4:-45294842 | None:intergenic |
| ACCAAATCCTGGAGCTTTGA+TGG | 0.365679 | 4.4:-45293287 | None:intergenic |
| ATTGAGGAAGGTATTGTTCC+TGG | 0.376386 | 4.4:+45293985 | MS.gene08674:CDS |
| CAAAGGATGAGTTGCAATCC+AGG | 0.386193 | 4.4:+45293779 | MS.gene08674:CDS |
| GAGAGGATTGCTAAATTATC+TGG | 0.395315 | 4.4:+45293865 | MS.gene08674:CDS |
| AGATATCACTGGTGAGGCTT+TGG | 0.395603 | 4.4:+45293219 | MS.gene08674:CDS |
| AAACGAGGAGGAAGACTCTA+TGG | 0.398802 | 4.4:-45292877 | None:intergenic |
| TTTCTTCTCTCACCAAATCC+TGG | 0.401579 | 4.4:-45293298 | None:intergenic |
| TGATGCAGCATCAGCAATAA+TGG | 0.409954 | 4.4:-45293758 | None:intergenic |
| AGAAGTGGTGAATGGGAGGT+TGG | 0.412726 | 4.4:+45294671 | MS.gene08674:CDS |
| GCTCAAAATGCTGGAATAGA+AGG | 0.412779 | 4.4:+45294626 | MS.gene08674:CDS |
| GCTGTTGCTTCTATTTCTGC+TGG | 0.418816 | 4.4:+45292786 | MS.gene08674:intron |
| CTTAAACGGTAAGGCCTTGT+GGG | 0.430025 | 4.4:-45294865 | None:intergenic |
| TCAATATTGCAATGTCTTGA+AGG | 0.436075 | 4.4:-45293327 | None:intergenic |
| TGCTGGTGCAGCTCTAATTA+GGG | 0.437513 | 4.4:+45292321 | MS.gene08674:CDS |
| GGTGGAAGAGCTTGAGAAGT+TGG | 0.438321 | 4.4:+45292642 | MS.gene08674:CDS |
| GCTGGAAATGATGAGTTGAT+TGG | 0.440283 | 4.4:+45292804 | MS.gene08674:CDS |
| TTTCTTCAGTTGTGCAACCC+TGG | 0.441852 | 4.4:-45293797 | None:intergenic |
| GCTGTGGCTGCTGCCCCACA+AGG | 0.444657 | 4.4:+45294851 | MS.gene08674:CDS |
| AACAAGAAGGCCCAAATCAC+TGG | 0.445601 | 4.4:-45293671 | None:intergenic |
| TACCTCGGGGTCCGAGAGTA+AGG | 0.449271 | 4.4:-45291565 | None:intergenic |
| GCATAGCACGGCGTGAATCT+TGG | 0.451358 | 4.4:-45291508 | None:intergenic |
| AGAACGGAGAATTGAGGTTG+AGG | 0.455957 | 4.4:-45291266 | None:intergenic |
| GGACTTCTCAGTGTGACATC+AGG | 0.457635 | 4.4:+45292568 | MS.gene08674:CDS |
| GAAAATTAGAAGTGGTGAAT+GGG | 0.459259 | 4.4:+45294664 | MS.gene08674:CDS |
| GCTGAAGCAATTGGCAAGGT+TGG | 0.460825 | 4.4:+45292837 | MS.gene08674:CDS |
| GGATGAGTTTGGCAGTCCTA+AGG | 0.461802 | 4.4:+45292240 | MS.gene08674:CDS |
| AAAAGATATAATTCCTCTGT+TGG | 0.463003 | 4.4:+45293153 | MS.gene08674:CDS |
| TGCTTATGTTCCAGCAATCA+AGG | 0.463871 | 4.4:+45294035 | MS.gene08674:CDS |
| TAATTAATCTAAAACTTAAA+CGG | 0.464303 | 4.4:-45294879 | None:intergenic |
| AGATTCACGCCGTGCTATGC+AGG | 0.464712 | 4.4:+45291511 | MS.gene08674:CDS |
| CATTCCTTCTTCGACTTCGA+CGG | 0.464884 | 4.4:-45292907 | None:intergenic |
| ACACCATCGTTTACAACCTT+AGG | 0.465120 | 4.4:-45292256 | None:intergenic |
| GCTCGGGAAATCATTAAGCT+TGG | 0.465886 | 4.4:+45292547 | MS.gene08674:CDS |
| GCACACCTTGTTACCTTCGC+AGG | 0.466595 | 4.4:-45294749 | None:intergenic |
| TGCTGCTTCAGTGGCTGGGA+TGG | 0.468314 | 4.4:+45294781 | MS.gene08674:CDS |
| GCCTAAGCCCAGGGCAGCTG+TGG | 0.469153 | 4.4:+45294835 | MS.gene08674:CDS |
| TCAAGATTTGTAACAAATTG+GGG | 0.473091 | 4.4:-45293067 | None:intergenic |
| AGAAAATTAGAAGTGGTGAA+TGG | 0.475205 | 4.4:+45294663 | MS.gene08674:CDS |
| CAAGACATTGCAATATTGAC+AGG | 0.482708 | 4.4:+45293331 | MS.gene08674:CDS |
| AAGTTTACGATCCTCAAGTT+CGG | 0.483262 | 4.4:-45293926 | None:intergenic |
| AATAATGGTGGTAGAATCCT+TGG | 0.484524 | 4.4:-45293743 | None:intergenic |
| AGGCACAAACGAGTCTTAGC+AGG | 0.488076 | 4.4:+45291399 | MS.gene08674:intron |
| GATGCTGTTGGCCTTACTCT+CGG | 0.491933 | 4.4:+45291554 | MS.gene08674:CDS |
| TCACGCCGTGCTATGCAGGC+TGG | 0.498346 | 4.4:+45291515 | MS.gene08674:CDS |
| TAAAACAGTAGCGGCTTTGG+TGG | 0.499019 | 4.4:+45292624 | MS.gene08674:CDS |
| GAAGGCCCAAATCACTGGCC+TGG | 0.503715 | 4.4:-45293666 | None:intergenic |
| AATAGAAGGTGAAGTAGTTG+TGG | 0.504535 | 4.4:+45294640 | MS.gene08674:CDS |
| TGTAATTAACCCTCCCATGT+TGG | 0.504603 | 4.4:-45291430 | None:intergenic |
| TGGTTAGTTACCTGGTTGGT+AGG | 0.506460 | 4.4:-45291289 | None:intergenic |
| AGGAGCTGACATCGTTCAAA+AGG | 0.507340 | 4.4:+45294086 | MS.gene08674:CDS |
| TTGAAGTGCTTTCAACAAGA+AGG | 0.508700 | 4.4:-45293684 | None:intergenic |
| ACTAATGACTCAGCTGGAGA+TGG | 0.509296 | 4.4:+45292502 | MS.gene08674:CDS |
| AGCACTTCAATTGAACAACT+TGG | 0.512887 | 4.4:+45293697 | MS.gene08674:CDS |
| TCATTGATTGCTCAAAATGC+TGG | 0.518366 | 4.4:+45294617 | MS.gene08674:CDS |
| TCTATGGATAAAACACCATC+AGG | 0.519843 | 4.4:-45292861 | None:intergenic |
| AGAATGCTGCTTCAGTGGCT+GGG | 0.520388 | 4.4:+45294777 | MS.gene08674:CDS |
| ACAACCGTCGAAGTCGAAGA+AGG | 0.524172 | 4.4:+45292903 | MS.gene08674:CDS |
| CACTTGCTTTAACCACAAAA+CGG | 0.526937 | 4.4:-45291466 | None:intergenic |
| CTTCGGCAATGATAAGCAAA+GGG | 0.527412 | 4.4:-45293198 | None:intergenic |
| TATTGAGTTACCTGATGCTA+TGG | 0.527504 | 4.4:+45292294 | MS.gene08674:CDS |
| TCTGCAGAATGCTGCTTCAG+TGG | 0.527899 | 4.4:+45294772 | MS.gene08674:CDS |
| AGCCTCACCAGTGATATCTT+CGG | 0.529074 | 4.4:-45293215 | None:intergenic |
| AATCTAAAACTTAAACGGTA+AGG | 0.533828 | 4.4:-45294874 | None:intergenic |
| AATCCTGTGTCAATCAAGAA+AGG | 0.534087 | 4.4:+45292595 | MS.gene08674:CDS |
| AGTAAAACTAATGACTCAGC+TGG | 0.535745 | 4.4:+45292496 | MS.gene08674:CDS |
| GGATCGTAAACTTAGAATTG+AGG | 0.536649 | 4.4:+45293936 | MS.gene08674:CDS |
| GGTAGGAGAACGGAGAATTG+AGG | 0.536812 | 4.4:-45291272 | None:intergenic |
| GTGGCTGCCATCAAAGCTCC+AGG | 0.538427 | 4.4:+45293280 | MS.gene08674:CDS |
| AGCAGGAAGGCGAACCAACA+TGG | 0.541019 | 4.4:+45291416 | MS.gene08674:CDS |
| TGGTGGAGTGGCAGTCATCA+AGG | 0.542101 | 4.4:+45293885 | MS.gene08674:CDS |
| ATTCCTTTCTTGATTGACAC+AGG | 0.542961 | 4.4:-45292598 | None:intergenic |
| GAGAGTAAGGCCAACAGCAT+CGG | 0.544516 | 4.4:-45291552 | None:intergenic |
| ACAATGATTGCTGAAGCAAT+TGG | 0.546352 | 4.4:+45292828 | MS.gene08674:CDS |
| TGAGGTTGAGGATAGAGCGT+TGG | 0.551901 | 4.4:-45291254 | None:intergenic |
| ACTTAAACGGTAAGGCCTTG+TGG | 0.553935 | 4.4:-45294866 | None:intergenic |
| GAAGGTATTGTTCCTGGCGG+AGG | 0.554238 | 4.4:+45293991 | MS.gene08674:CDS |
| TTGTTGAAAAGCCTAAGCCC+AGG | 0.555169 | 4.4:+45294825 | MS.gene08674:CDS |
| TCCTGGCGGAGGTACAGCAT+TGG | 0.556861 | 4.4:+45294002 | MS.gene08674:CDS |
| CGTCGAAGTCGAAGAAGGAA+TGG | 0.560458 | 4.4:+45292908 | MS.gene08674:CDS |
| GATAAACTTGCCGATGCTGT+TGG | 0.563462 | 4.4:+45291542 | MS.gene08674:CDS |
| CAATTCCAGCCTGCATAGCA+CGG | 0.564119 | 4.4:-45291520 | None:intergenic |
| AGGAACAATACCTTCCTCAA+TGG | 0.564642 | 4.4:-45293983 | None:intergenic |
| AGGATTTGGTGAGAGAAGAA+AGG | 0.566687 | 4.4:+45293300 | MS.gene08674:CDS |
| CTAATGACTCAGCTGGAGAT+GGG | 0.568805 | 4.4:+45292503 | MS.gene08674:CDS |
| GACAGACTCAGTTTACGACT+CGG | 0.569507 | 4.4:+45293831 | MS.gene08674:CDS |
| ACCAATGCTGTACCTCCGCC+AGG | 0.569522 | 4.4:-45294003 | None:intergenic |
| AACTAGAAGACGCAGATGAG+AGG | 0.576895 | 4.4:+45294061 | MS.gene08674:CDS |
| TGCTAAATTATCTGGTGGAG+TGG | 0.578652 | 4.4:+45293873 | MS.gene08674:CDS |
| TATTGCTGATGCTGCATCAA+AGG | 0.580565 | 4.4:+45293762 | MS.gene08674:CDS |
| GCAGGAAGGCGAACCAACAT+GGG | 0.584017 | 4.4:+45291417 | MS.gene08674:CDS |
| ATTGGCAAGGTTGGACCTGA+TGG | 0.586040 | 4.4:+45292846 | MS.gene08674:CDS |
| CACGCAGCTTGTTCACAACA+AGG | 0.586245 | 4.4:-45293246 | None:intergenic |
| TCGACCCTGCGAAGGTAACA+AGG | 0.586880 | 4.4:+45294744 | MS.gene08674:CDS |
| ATCATTGCCGAAGATATCAC+TGG | 0.598076 | 4.4:+45293208 | MS.gene08674:CDS |
| TCTTCGGCAATGATAAGCAA+AGG | 0.598336 | 4.4:-45293199 | None:intergenic |
| CCTGATGCTATGGAAAATGC+TGG | 0.601164 | 4.4:+45292304 | MS.gene08674:CDS |
| ATGACTTGTAGATTGACAGA+GGG | 0.604162 | 4.4:+45293035 | MS.gene08674:intron |
| GGTGGTAGAATCCTTGGAGA+TGG | 0.604265 | 4.4:-45293737 | None:intergenic |
| TGCTACAGAGACCGAACTTG+AGG | 0.605909 | 4.4:+45293915 | MS.gene08674:CDS |
| GAAATGGTTAGTTACCTGGT+TGG | 0.606997 | 4.4:-45291293 | None:intergenic |
| GTTGTGGAGAAAATTAGAAG+TGG | 0.607273 | 4.4:+45294656 | MS.gene08674:CDS |
| ACGGCGTGAATCTTGGTCAA+AGG | 0.607568 | 4.4:-45291501 | None:intergenic |
| CACACCTTGTTACCTTCGCA+GGG | 0.607881 | 4.4:-45294748 | None:intergenic |
| AAGAGCTTGAGAAGTTGGCT+AGG | 0.608935 | 4.4:+45292647 | MS.gene08674:CDS |
| TATTGCAATGTCTTGAAGGA+GGG | 0.612191 | 4.4:-45293323 | None:intergenic |
| GAAGACGCAGATGAGAGGCT+AGG | 0.612286 | 4.4:+45294066 | MS.gene08674:CDS |
| CAAGATTTGTAACAAATTGG+GGG | 0.614790 | 4.4:-45293066 | None:intergenic |
| TTGGCTAGGCCTGTTAAAGG+TGG | 0.615079 | 4.4:+45292661 | MS.gene08674:CDS |
| TCTCCGTTCTCCTACCAACC+AGG | 0.616314 | 4.4:+45291279 | MS.gene08674:CDS |
| AGGATTGCTAAATTATCTGG+TGG | 0.617517 | 4.4:+45293868 | MS.gene08674:CDS |
| AAAGGATGAGTTGCAATCCA+GGG | 0.618406 | 4.4:+45293780 | MS.gene08674:CDS |
| TTACCTGGTTGGTAGGAGAA+CGG | 0.618698 | 4.4:-45291282 | None:intergenic |
| AATTAGAAGTGGTGAATGGG+AGG | 0.619643 | 4.4:+45294667 | MS.gene08674:CDS |
| TGGAGTCATCGACCCTGCGA+AGG | 0.619723 | 4.4:+45294736 | MS.gene08674:CDS |
| CAAAGGGGCTCTCAATTGAG+TGG | 0.620297 | 4.4:-45293182 | None:intergenic |
| TTCAACAACAATGGCCTGTG+TGG | 0.620761 | 4.4:-45294810 | None:intergenic |
| ATTCTCATAAGTGTCTGTCA+TGG | 0.622423 | 4.4:-45294702 | None:intergenic |
| TGTTGAAAAGCCTAAGCCCA+GGG | 0.625995 | 4.4:+45294826 | MS.gene08674:CDS |
| AGATAATTTAGCAATCCTCT+CGG | 0.626680 | 4.4:-45293863 | None:intergenic |
| AAGATTTGTAACAAATTGGG+GGG | 0.629058 | 4.4:-45293065 | None:intergenic |
| GGAAGGCGAACCAACATGGG+AGG | 0.631849 | 4.4:+45291420 | MS.gene08674:CDS |
| ATATTGCAATGTCTTGAAGG+AGG | 0.635052 | 4.4:-45293324 | None:intergenic |
| GGAGTGGCAGTCATCAAGGT+CGG | 0.637367 | 4.4:+45293889 | MS.gene08674:CDS |
| TGCCGAAGATATCACTGGTG+AGG | 0.639474 | 4.4:+45293213 | MS.gene08674:CDS |
| TCGAAAAGTGACCATCTCCA+AGG | 0.643733 | 4.4:+45293726 | MS.gene08674:CDS |
| TATGACTTGTAGATTGACAG+AGG | 0.649175 | 4.4:+45293034 | MS.gene08674:intron |
| GGCCTTACTCTCGGACCCCG+AGG | 0.649612 | 4.4:+45291563 | MS.gene08674:CDS |
| ACTCGGAGAAACTGGCCGAG+AGG | 0.649780 | 4.4:+45293848 | MS.gene08674:CDS |
| AGGAATTGATAAAACAGTAG+CGG | 0.654535 | 4.4:+45292615 | MS.gene08674:CDS |
| GAAGGCGAACCAACATGGGA+GGG | 0.655547 | 4.4:+45291421 | MS.gene08674:CDS |
| GATTGCTGAAGCAATTGGCA+AGG | 0.668567 | 4.4:+45292833 | MS.gene08674:CDS |
| AGTCCTAAGGTTGTAAACGA+TGG | 0.671771 | 4.4:+45292253 | MS.gene08674:CDS |
| ACAAACGAGTCTTAGCAGGA+AGG | 0.673717 | 4.4:+45291403 | MS.gene08674:CDS |
| GCTGCGTGGTATCCTTAATG+TGG | 0.674392 | 4.4:+45293261 | MS.gene08674:CDS |
| TTAAACGGTAAGGCCTTGTG+GGG | 0.676362 | 4.4:-45294864 | None:intergenic |
| GACGGTTGTCTCAAACGAGG+AGG | 0.683850 | 4.4:-45292889 | None:intergenic |
| CGAAGTCGAAGAAGGAATGG+AGG | 0.684643 | 4.4:+45292911 | MS.gene08674:CDS |
| AGCTGGAGATGGGACTACAA+CGG | 0.691077 | 4.4:+45292513 | MS.gene08674:CDS |
| TGCAGCATCAGCAATAATGG+TGG | 0.697793 | 4.4:-45293755 | None:intergenic |
| TGGTGCAGCTCTAATTAGGG+AGG | 0.702507 | 4.4:+45292324 | MS.gene08674:CDS |
| ACGCAGCTTGTTCACAACAA+GGG | 0.703024 | 4.4:-45293245 | None:intergenic |
| TGGGATGGTCTTGACCACAC+AGG | 0.718657 | 4.4:+45294796 | MS.gene08674:CDS |
| GAGGAAGGTATTGTTCCTGG+CGG | 0.718906 | 4.4:+45293988 | MS.gene08674:CDS |
| TTCGGCAATGATAAGCAAAG+GGG | 0.721019 | 4.4:-45293197 | None:intergenic |
| CTTGTTGTGAACAAGCTGCG+TGG | 0.747846 | 4.4:+45293247 | MS.gene08674:CDS |
| TTCGACGGTTGTCTCAAACG+AGG | 0.759858 | 4.4:-45292892 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTTTTTTTTTTTTTGA+AGG | + | chr4.4:45292202-45292221 | MS.gene08674:intron | 10.0% |
| !! | AATTAAATGAAAATGAATGA+AGG | - | chr4.4:45291320-45291339 | None:intergenic | 15.0% |
| !! | ATTAAATGAAAATGAATGAA+GGG | - | chr4.4:45291319-45291338 | None:intergenic | 15.0% |
| !! | TGTTTAATCATGTTAAATAA+TGG | + | chr4.4:45293448-45293467 | MS.gene08674:intron | 15.0% |
| !!! | AAATAATATCAACATTTTCA+GGG | + | chr4.4:45294228-45294247 | MS.gene08674:intron | 15.0% |
| !!! | ATAAATCTGAATGTATTTTT+CGG | + | chr4.4:45291760-45291779 | MS.gene08674:intron | 15.0% |
| !!! | GTTGTTTTTATAAACTATAT+TGG | + | chr4.4:45291902-45291921 | MS.gene08674:intron | 15.0% |
| !!! | TAATATTGTTGCTATTATAT+GGG | + | chr4.4:45292161-45292180 | MS.gene08674:intron | 15.0% |
| !!! | TATATGTATTCATTGTTTTT+TGG | + | chr4.4:45293365-45293384 | MS.gene08674:intron | 15.0% |
| !!! | TATTCTTTTTTTGTTTGAAT+CGG | + | chr4.4:45292422-45292441 | MS.gene08674:intron | 15.0% |
| !!! | TTAATATTGTTGCTATTATA+TGG | + | chr4.4:45292160-45292179 | MS.gene08674:intron | 15.0% |
| !! | AAAAAGGGATGAAAAATAAA+TGG | - | chr4.4:45294484-45294503 | None:intergenic | 20.0% |
| !! | GCTTGAAACATTAATTTATA+AGG | - | chr4.4:45294266-45294285 | None:intergenic | 20.0% |
| !! | TACATTTCAAAAAGATACAT+GGG | - | chr4.4:45292045-45292064 | None:intergenic | 20.0% |
| !! | TACTATAAGAACATTTGATT+TGG | + | chr4.4:45292708-45292727 | MS.gene08674:intron | 20.0% |
| !! | TTAAATGAAAATGAATGAAG+GGG | - | chr4.4:45291318-45291337 | None:intergenic | 20.0% |
| !! | TTGAATGTAATTATATGTGT+TGG | + | chr4.4:45291605-45291624 | MS.gene08674:intron | 20.0% |
| !!! | AGGAATTATATCTTTTATTG+CGG | - | chr4.4:45293149-45293168 | None:intergenic | 20.0% |
| !!! | ATATTTGATGAAGTTTTGAT+TGG | - | chr4.4:45294515-45294534 | None:intergenic | 20.0% |
| !!! | CAAATAATATCAACATTTTC+AGG | + | chr4.4:45294227-45294246 | MS.gene08674:intron | 20.0% |
| !!! | CATAAACTAAATTTTTGAAC+AGG | - | chr4.4:45293479-45293498 | None:intergenic | 20.0% |
| !!! | TATTTGATGAAGTTTTGATT+GGG | - | chr4.4:45294514-45294533 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTTGAAGGG+AGG | + | chr4.4:45292206-45292225 | MS.gene08674:intron | 20.0% |
| ! | AAAAGATATAATTCCTCTGT+TGG | + | chr4.4:45293153-45293172 | MS.gene08674:CDS | 25.0% |
| ! | AAAAGCAATAGAAATAGAAG+TGG | - | chr4.4:45293015-45293034 | None:intergenic | 25.0% |
| ! | AAACAATAATCATAGCATAC+TGG | - | chr4.4:45294145-45294164 | None:intergenic | 25.0% |
| ! | ACTCAAATTATCATATACCT+CGG | - | chr4.4:45291583-45291602 | None:intergenic | 25.0% |
| ! | ATAAGCTCAAATAAGCTAAA+TGG | + | chr4.4:45292013-45292032 | MS.gene08674:intron | 25.0% |
| ! | CAGATTGTAAATTGTAATCA+TGG | - | chr4.4:45294180-45294199 | None:intergenic | 25.0% |
| ! | CTCAAGATTTGTAACAAATT+GGG | - | chr4.4:45293071-45293090 | None:intergenic | 25.0% |
| ! | GTACATTTCAAAAAGATACA+TGG | - | chr4.4:45292046-45292065 | None:intergenic | 25.0% |
| ! | GTTGATATTATTTGTGCTTA+CGG | - | chr4.4:45294221-45294240 | None:intergenic | 25.0% |
| ! | TATGAGAATTTAATTGAGTC+TGG | + | chr4.4:45294716-45294735 | MS.gene08674:CDS | 25.0% |
| ! | TCAAGATTTGTAACAAATTG+GGG | - | chr4.4:45293070-45293089 | None:intergenic | 25.0% |
| ! | TCTCAAGATTTGTAACAAAT+TGG | - | chr4.4:45293072-45293091 | None:intergenic | 25.0% |
| ! | TGATTGGGGAAAAATAAAAA+GGG | - | chr4.4:45294499-45294518 | None:intergenic | 25.0% |
| ! | TTCCAATTATAAACATTCAC+CGG | - | chr4.4:45292973-45292992 | None:intergenic | 25.0% |
| ! | TTGATATTATTTGTGCTTAC+GGG | - | chr4.4:45294220-45294239 | None:intergenic | 25.0% |
| ! | TTGATTGGGGAAAAATAAAA+AGG | - | chr4.4:45294500-45294519 | None:intergenic | 25.0% |
| !! | ATTTTCCGATTATTTGTTTC+AGG | + | chr4.4:45291379-45291398 | MS.gene08674:intron | 25.0% |
| !! | ATTTTGTAGTTAAGTGCTTT+TGG | - | chr4.4:45291347-45291366 | None:intergenic | 25.0% |
| !! | TATCAAGTATCAACATTTTC+AGG | + | chr4.4:45294316-45294335 | MS.gene08674:intron | 25.0% |
| !! | TTTGAAGATTTTTGTGTACA+TGG | + | chr4.4:45292391-45292410 | MS.gene08674:intron | 25.0% |
| !! | TTTTCCTTTTGTCTATGTAT+AGG | + | chr4.4:45294577-45294596 | MS.gene08674:intron | 25.0% |
| !! | TTTTGTAGTTAAGTGCTTTT+GGG | - | chr4.4:45291346-45291365 | None:intergenic | 25.0% |
| !!! | AAATGGATTTTCTTGAAAAC+TGG | - | chr4.4:45294467-45294486 | None:intergenic | 25.0% |
| !!! | ATTTGATGAAGTTTTGATTG+GGG | - | chr4.4:45294513-45294532 | None:intergenic | 25.0% |
| !!! | ATTTTTTTAGAAATGTGAGG+TGG | + | chr4.4:45292084-45292103 | MS.gene08674:intron | 25.0% |
| !!! | TGATGTTGATTTAAAACTGA+AGG | + | chr4.4:45292468-45292487 | MS.gene08674:intron | 25.0% |
| !!! | TGGATTTTTTTAGAAATGTG+AGG | + | chr4.4:45292081-45292100 | MS.gene08674:intron | 25.0% |
| !!! | TGTATTTTTCGGATAAAATG+CGG | + | chr4.4:45291771-45291790 | MS.gene08674:intron | 25.0% |
| AAACCTACATTGTACATGAT+TGG | - | chr4.4:45293424-45293443 | None:intergenic | 30.0% | |
| AAAGGTGGAGATGATATAAA+AGG | + | chr4.4:45292676-45292695 | MS.gene08674:CDS | 30.0% | |
| AAGATTTGTAACAAATTGGG+GGG | - | chr4.4:45293068-45293087 | None:intergenic | 30.0% | |
| AATGCCTATACATAGACAAA+AGG | - | chr4.4:45294584-45294603 | None:intergenic | 30.0% | |
| AGAAAATTAGAAGTGGTGAA+TGG | + | chr4.4:45294663-45294682 | MS.gene08674:CDS | 30.0% | |
| AGATAATTTAGCAATCCTCT+CGG | - | chr4.4:45293866-45293885 | None:intergenic | 30.0% | |
| AGGAATTGATAAAACAGTAG+CGG | + | chr4.4:45292615-45292634 | MS.gene08674:CDS | 30.0% | |
| CAAACAAGGAAACAGAATAT+GGG | - | chr4.4:45294363-45294382 | None:intergenic | 30.0% | |
| CAAGATTTGTAACAAATTGG+GGG | - | chr4.4:45293069-45293088 | None:intergenic | 30.0% | |
| CTCAAATTATCATATACCTC+GGG | - | chr4.4:45291582-45291601 | None:intergenic | 30.0% | |
| GAAAATTAGAAGTGGTGAAT+GGG | + | chr4.4:45294664-45294683 | MS.gene08674:CDS | 30.0% | |
| TCAAATTATCATATACCTCG+GGG | - | chr4.4:45291581-45291600 | None:intergenic | 30.0% | |
| TCAATATTGCAATGTCTTGA+AGG | - | chr4.4:45293330-45293349 | None:intergenic | 30.0% | |
| TCCAATTATAAACATTCACC+GGG | - | chr4.4:45292972-45292991 | None:intergenic | 30.0% | |
| TGACTTTGGATTTGCATAAA+TGG | + | chr4.4:45291717-45291736 | MS.gene08674:intron | 30.0% | |
| TGATATTATTTGTGCTTACG+GGG | - | chr4.4:45294219-45294238 | None:intergenic | 30.0% | |
| TGTACTTATAGAAACATGTG+TGG | + | chr4.4:45292061-45292080 | MS.gene08674:intron | 30.0% | |
| TTATATGTGTTGTCTCATAC+TGG | + | chr4.4:45291654-45291673 | MS.gene08674:intron | 30.0% | |
| TTCAATTGAACAACTTGGTT+TGG | + | chr4.4:45293702-45293721 | MS.gene08674:CDS | 30.0% | |
| TTGTGCCTGAAACAAATAAT+CGG | - | chr4.4:45291387-45291406 | None:intergenic | 30.0% | |
| ! | AATAAGCTCTTTTACCAAAC+AGG | - | chr4.4:45291798-45291817 | None:intergenic | 30.0% |
| ! | ATAAGCTCTTTTACCAAACA+GGG | - | chr4.4:45291797-45291816 | None:intergenic | 30.0% |
| ! | ATTTGACATCTTTTCTTTCC+CGG | + | chr4.4:45292951-45292970 | MS.gene08674:intron | 30.0% |
| ! | ATTTTGTGCATTTAACTGCT+AGG | + | chr4.4:45293634-45293653 | MS.gene08674:intron | 30.0% |
| ! | CATATTCTGTTTCCTTGTTT+GGG | + | chr4.4:45294362-45294381 | MS.gene08674:intron | 30.0% |
| ! | CTTTTATTGCGGAAATCTTT+TGG | - | chr4.4:45293138-45293157 | None:intergenic | 30.0% |
| ! | GGAGATGATATAAAAGGTAT+TGG | + | chr4.4:45292682-45292701 | MS.gene08674:intron | 30.0% |
| ! | TTTTGTCTATGTATAGGCAT+TGG | + | chr4.4:45294583-45294602 | MS.gene08674:intron | 30.0% |
| !!! | AATGTTGTTTTGGATGAGTT+TGG | + | chr4.4:45292229-45292248 | MS.gene08674:CDS | 30.0% |
| !!! | TCTTTTTTTGTTTGAATCGG+TGG | + | chr4.4:45292425-45292444 | MS.gene08674:intron | 30.0% |
| AACTTGTGTTTCCTTGTCAT+CGG | - | chr4.4:45293585-45293604 | None:intergenic | 35.0% | |
| AAGTTTACGATCCTCAAGTT+CGG | - | chr4.4:45293929-45293948 | None:intergenic | 35.0% | |
| AATAATGGTGGTAGAATCCT+TGG | - | chr4.4:45293746-45293765 | None:intergenic | 35.0% | |
| AATAGAAGGTGAAGTAGTTG+TGG | + | chr4.4:45294640-45294659 | MS.gene08674:CDS | 35.0% | |
| AATCCTGTGTCAATCAAGAA+AGG | + | chr4.4:45292595-45292614 | MS.gene08674:CDS | 35.0% | |
| ACAATGATTGCTGAAGCAAT+TGG | + | chr4.4:45292828-45292847 | MS.gene08674:CDS | 35.0% | |
| ACACTCATAATAGCACAACA+AGG | - | chr4.4:45294419-45294438 | None:intergenic | 35.0% | |
| AGCACTTCAATTGAACAACT+TGG | + | chr4.4:45293697-45293716 | MS.gene08674:CDS | 35.0% | |
| AGGATTGCTAAATTATCTGG+TGG | + | chr4.4:45293868-45293887 | MS.gene08674:CDS | 35.0% | |
| AGTAAAACTAATGACTCAGC+TGG | + | chr4.4:45292496-45292515 | MS.gene08674:CDS | 35.0% | |
| ATATCATCTCCACCTTTAAC+AGG | - | chr4.4:45292673-45292692 | None:intergenic | 35.0% | |
| ATATTGCAATGTCTTGAAGG+AGG | - | chr4.4:45293327-45293346 | None:intergenic | 35.0% | |
| ATTCCTTTCTTGATTGACAC+AGG | - | chr4.4:45292601-45292620 | None:intergenic | 35.0% | |
| ATTCTCATAAGTGTCTGTCA+TGG | - | chr4.4:45294705-45294724 | None:intergenic | 35.0% | |
| CAAGACATTGCAATATTGAC+AGG | + | chr4.4:45293331-45293350 | MS.gene08674:CDS | 35.0% | |
| CACTTGCTTTAACCACAAAA+CGG | - | chr4.4:45291469-45291488 | None:intergenic | 35.0% | |
| CCAAACAAGGAAACAGAATA+TGG | - | chr4.4:45294364-45294383 | None:intergenic | 35.0% | |
| CCATATTCTGTTTCCTTGTT+TGG | + | chr4.4:45294361-45294380 | MS.gene08674:intron | 35.0% | |
| GAAAACATGGAATGTGACTT+TGG | + | chr4.4:45291703-45291722 | MS.gene08674:intron | 35.0% | |
| GAAAATGAATGAAGGGGAAA+TGG | - | chr4.4:45291312-45291331 | None:intergenic | 35.0% | |
| GAGAGGATTGCTAAATTATC+TGG | + | chr4.4:45293865-45293884 | MS.gene08674:CDS | 35.0% | |
| GGATCGTAAACTTAGAATTG+AGG | + | chr4.4:45293936-45293955 | MS.gene08674:CDS | 35.0% | |
| GTTGTGGAGAAAATTAGAAG+TGG | + | chr4.4:45294656-45294675 | MS.gene08674:CDS | 35.0% | |
| TAGCATGACATTACAACAAC+TGG | - | chr4.4:45292745-45292764 | None:intergenic | 35.0% | |
| TATTGAGTTACCTGATGCTA+TGG | + | chr4.4:45292294-45292313 | MS.gene08674:CDS | 35.0% | |
| TATTGCAATGTCTTGAAGGA+GGG | - | chr4.4:45293326-45293345 | None:intergenic | 35.0% | |
| TCCCGGTGAATGTTTATAAT+TGG | + | chr4.4:45292968-45292987 | MS.gene08674:intron | 35.0% | |
| TCTATGGATAAAACACCATC+AGG | - | chr4.4:45292864-45292883 | None:intergenic | 35.0% | |
| TGTCCAATCATGTACAATGT+AGG | + | chr4.4:45293418-45293437 | MS.gene08674:intron | 35.0% | |
| TTCAAGCGTCATATAACTCA+TGG | + | chr4.4:45294279-45294298 | MS.gene08674:intron | 35.0% | |
| ! | ACAGAAAGTTAACCGTTTTG+TGG | + | chr4.4:45291454-45291473 | MS.gene08674:CDS | 35.0% |
| ! | ATCGGTTCTTTGTTGTATCA+TGG | - | chr4.4:45293567-45293586 | None:intergenic | 35.0% |
| ! | ATGACTTGTAGATTGACAGA+GGG | + | chr4.4:45293035-45293054 | MS.gene08674:intron | 35.0% |
| ! | CTTAGGCTTTTCAACAACAA+TGG | - | chr4.4:45294822-45294841 | None:intergenic | 35.0% |
| ! | TATGACTTGTAGATTGACAG+AGG | + | chr4.4:45293034-45293053 | MS.gene08674:intron | 35.0% |
| ! | TATTGCGGAAATCTTTTGGT+CGG | - | chr4.4:45293134-45293153 | None:intergenic | 35.0% |
| ! | TCATTGATTGCTCAAAATGC+TGG | + | chr4.4:45294617-45294636 | MS.gene08674:CDS | 35.0% |
| ! | TTGAAGTGCTTTCAACAAGA+AGG | - | chr4.4:45293687-45293706 | None:intergenic | 35.0% |
| ! | TTGTTTGAATCGGTGGTTTT+TGG | + | chr4.4:45292432-45292451 | MS.gene08674:intron | 35.0% |
| ! | TTTTGAGCAATCAATGATGC+AGG | - | chr4.4:45294614-45294633 | None:intergenic | 35.0% |
| !! | TCAACATTTTCAGGGTATTC+TGG | + | chr4.4:45294236-45294255 | MS.gene08674:intron | 35.0% |
| !!! | TCTAGTTTTTCCTTGATTGC+TGG | - | chr4.4:45294048-45294067 | None:intergenic | 35.0% |
| AAAGGATGAGTTGCAATCCA+GGG | + | chr4.4:45293780-45293799 | MS.gene08674:CDS | 40.0% | |
| AATTAGAAGTGGTGAATGGG+AGG | + | chr4.4:45294667-45294686 | MS.gene08674:CDS | 40.0% | |
| ACAACAAAGAACCGATGACA+AGG | + | chr4.4:45293571-45293590 | MS.gene08674:intron | 40.0% | |
| ACACCATCGTTTACAACCTT+AGG | - | chr4.4:45292259-45292278 | None:intergenic | 40.0% | |
| AGGAACAATACCTTCCTCAA+TGG | - | chr4.4:45293986-45294005 | None:intergenic | 40.0% | |
| AGTCCTAAGGTTGTAAACGA+TGG | + | chr4.4:45292253-45292272 | MS.gene08674:CDS | 40.0% | |
| ATCATTGCCGAAGATATCAC+TGG | + | chr4.4:45293208-45293227 | MS.gene08674:CDS | 40.0% | |
| CTGATGCGTTAGTGAAAACA+TGG | + | chr4.4:45291690-45291709 | MS.gene08674:intron | 40.0% | |
| CTTCGGCAATGATAAGCAAA+GGG | - | chr4.4:45293201-45293220 | None:intergenic | 40.0% | |
| GCTCAAAATGCTGGAATAGA+AGG | + | chr4.4:45294626-45294645 | MS.gene08674:CDS | 40.0% | |
| TATTGCTGATGCTGCATCAA+AGG | + | chr4.4:45293762-45293781 | MS.gene08674:CDS | 40.0% | |
| TCTTCGGCAATGATAAGCAA+AGG | - | chr4.4:45293202-45293221 | None:intergenic | 40.0% | |
| TGACAAGGAAACACAAGTTG+TGG | + | chr4.4:45293586-45293605 | MS.gene08674:intron | 40.0% | |
| TGATAAAACAGTAGCGGCTT+TGG | + | chr4.4:45292621-45292640 | MS.gene08674:CDS | 40.0% | |
| TGATGCAGCATCAGCAATAA+TGG | - | chr4.4:45293761-45293780 | None:intergenic | 40.0% | |
| TGCTAAATTATCTGGTGGAG+TGG | + | chr4.4:45293873-45293892 | MS.gene08674:CDS | 40.0% | |
| TGCTTATGTTCCAGCAATCA+AGG | + | chr4.4:45294035-45294054 | MS.gene08674:CDS | 40.0% | |
| TGTAATTAACCCTCCCATGT+TGG | - | chr4.4:45291433-45291452 | None:intergenic | 40.0% | |
| TTCGGCAATGATAAGCAAAG+GGG | - | chr4.4:45293200-45293219 | None:intergenic | 40.0% | |
| TTTCTTCTCTCACCAAATCC+TGG | - | chr4.4:45293301-45293320 | None:intergenic | 40.0% | |
| ! | CTGTTTCCTTGTTTGGGTAA+GGG | + | chr4.4:45294368-45294387 | MS.gene08674:intron | 40.0% |
| ! | GAAATGGTTAGTTACCTGGT+TGG | - | chr4.4:45291296-45291315 | None:intergenic | 40.0% |
| ! | TCTGTTTCCTTGTTTGGGTA+AGG | + | chr4.4:45294367-45294386 | MS.gene08674:intron | 40.0% |
| ! | TGTTTCCTTGTTTGGGTAAG+GGG | + | chr4.4:45294369-45294388 | MS.gene08674:intron | 40.0% |
| !! | AGGATTTGGTGAGAGAAGAA+AGG | + | chr4.4:45293300-45293319 | MS.gene08674:CDS | 40.0% |
| !! | ATTGAGGAAGGTATTGTTCC+TGG | + | chr4.4:45293985-45294004 | MS.gene08674:CDS | 40.0% |
| !! | GCTGGAAATGATGAGTTGAT+TGG | + | chr4.4:45292804-45292823 | MS.gene08674:CDS | 40.0% |
| !! | TGAAGGGAGGAATGTTGTTT+TGG | + | chr4.4:45292219-45292238 | MS.gene08674:intron | 40.0% |
| AAACGAGGAGGAAGACTCTA+TGG | - | chr4.4:45292880-45292899 | None:intergenic | 45.0% | |
| AACAAGAAGGCCCAAATCAC+TGG | - | chr4.4:45293674-45293693 | None:intergenic | 45.0% | |
| AACTAGAAGACGCAGATGAG+AGG | + | chr4.4:45294061-45294080 | MS.gene08674:CDS | 45.0% | |
| AAGAGCTTGAGAAGTTGGCT+AGG | + | chr4.4:45292647-45292666 | MS.gene08674:CDS | 45.0% | |
| AAGTTGGCTAGGCCTGTTAA+AGG | + | chr4.4:45292658-45292677 | MS.gene08674:CDS | 45.0% | |
| ACAAACGAGTCTTAGCAGGA+AGG | + | chr4.4:45291403-45291422 | MS.gene08674:CDS | 45.0% | |
| ACTAATGACTCAGCTGGAGA+TGG | + | chr4.4:45292502-45292521 | MS.gene08674:CDS | 45.0% | |
| AGAACGGAGAATTGAGGTTG+AGG | - | chr4.4:45291269-45291288 | None:intergenic | 45.0% | |
| AGATATCACTGGTGAGGCTT+TGG | + | chr4.4:45293219-45293238 | MS.gene08674:CDS | 45.0% | |
| AGCCTCACCAGTGATATCTT+CGG | - | chr4.4:45293218-45293237 | None:intergenic | 45.0% | |
| AGGAGCTGACATCGTTCAAA+AGG | + | chr4.4:45294086-45294105 | MS.gene08674:CDS | 45.0% | |
| CAAAGGATGAGTTGCAATCC+AGG | + | chr4.4:45293779-45293798 | MS.gene08674:CDS | 45.0% | |
| CATTCCTTCTTCGACTTCGA+CGG | - | chr4.4:45292910-45292929 | None:intergenic | 45.0% | |
| CCTGATGCTATGGAAAATGC+TGG | + | chr4.4:45292304-45292323 | MS.gene08674:CDS | 45.0% | |
| CTAATGACTCAGCTGGAGAT+GGG | + | chr4.4:45292503-45292522 | MS.gene08674:CDS | 45.0% | |
| GACAGACTCAGTTTACGACT+CGG | + | chr4.4:45293831-45293850 | MS.gene08674:CDS | 45.0% | |
| GATAAACTTGCCGATGCTGT+TGG | + | chr4.4:45291542-45291561 | MS.gene08674:CDS | 45.0% | |
| GATTGCTGAAGCAATTGGCA+AGG | + | chr4.4:45292833-45292852 | MS.gene08674:CDS | 45.0% | |
| GCTCGGGAAATCATTAAGCT+TGG | + | chr4.4:45292547-45292566 | MS.gene08674:CDS | 45.0% | |
| GGCAGCAAAAGTTGCATTCT+TGG | - | chr4.4:45293965-45293984 | None:intergenic | 45.0% | |
| TCGAAAAGTGACCATCTCCA+AGG | + | chr4.4:45293726-45293745 | MS.gene08674:CDS | 45.0% | |
| TGCAGCATCAGCAATAATGG+TGG | - | chr4.4:45293758-45293777 | None:intergenic | 45.0% | |
| TGTTGAAAAGCCTAAGCCCA+GGG | + | chr4.4:45294826-45294845 | MS.gene08674:CDS | 45.0% | |
| TTCAACAACAATGGCCTGTG+TGG | - | chr4.4:45294813-45294832 | None:intergenic | 45.0% | |
| TTGTTGAAAAGCCTAAGCCC+AGG | + | chr4.4:45294825-45294844 | MS.gene08674:CDS | 45.0% | |
| TTTCTTCAGTTGTGCAACCC+TGG | - | chr4.4:45293800-45293819 | None:intergenic | 45.0% | |
| ! | ACCAAATCCTGGAGCTTTGA+TGG | - | chr4.4:45293290-45293309 | None:intergenic | 45.0% |
| ! | ACGCAGCTTGTTCACAACAA+GGG | - | chr4.4:45293248-45293267 | None:intergenic | 45.0% |
| ! | ACTTTTGCTGCCATTGAGGA+AGG | + | chr4.4:45293973-45293992 | MS.gene08674:CDS | 45.0% |
| ! | AGGGGAAATGGTTAGTTACC+TGG | - | chr4.4:45291300-45291319 | None:intergenic | 45.0% |
| ! | AGTTTACGACTCGGAGAAAC+TGG | + | chr4.4:45293840-45293859 | MS.gene08674:CDS | 45.0% |
| ! | ATGCTGGTGCAGCTCTAATT+AGG | + | chr4.4:45292320-45292339 | MS.gene08674:CDS | 45.0% |
| ! | CCAGCATTTTCCATAGCATC+AGG | - | chr4.4:45292307-45292326 | None:intergenic | 45.0% |
| ! | CTTTGATGGCAGCCACATTA+AGG | - | chr4.4:45293276-45293295 | None:intergenic | 45.0% |
| ! | GACTACAACGGCTTCGATTT+TGG | + | chr4.4:45292525-45292544 | MS.gene08674:CDS | 45.0% |
| ! | TAAAACAGTAGCGGCTTTGG+TGG | + | chr4.4:45292624-45292643 | MS.gene08674:CDS | 45.0% |
| ! | TGAGTGGTTTTCTCCAACAG+AGG | - | chr4.4:45293169-45293188 | None:intergenic | 45.0% |
| ! | TGCAACTTTTGCTGCCATTG+AGG | + | chr4.4:45293969-45293988 | MS.gene08674:CDS | 45.0% |
| ! | TGCTGGTGCAGCTCTAATTA+GGG | + | chr4.4:45292321-45292340 | MS.gene08674:CDS | 45.0% |
| ! | TGGAGGTATGAACTCTTTGC+TGG | + | chr4.4:45292928-45292947 | MS.gene08674:intron | 45.0% |
| ! | TGGTTAGTTACCTGGTTGGT+AGG | - | chr4.4:45291292-45291311 | None:intergenic | 45.0% |
| ! | TTAAACGGTAAGGCCTTGTG+GGG | - | chr4.4:45294867-45294886 | None:intergenic | 45.0% |
| !! | GCTGTTGCTTCTATTTCTGC+TGG | + | chr4.4:45292786-45292805 | MS.gene08674:intron | 45.0% |
| !! | TTACCTGGTTGGTAGGAGAA+CGG | - | chr4.4:45291285-45291304 | None:intergenic | 45.0% |
| !! | ATTTATTTATTTATATAAAG+AGG | - | chr4.4:45292120-45292139 | None:intergenic | 5.0% |
| !! | TTTATTTATTTATATAAAGA+GGG | - | chr4.4:45292119-45292138 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTGAA+GGG | + | chr4.4:45292203-45292222 | MS.gene08674:intron | 5.0% |
| ACAACCGTCGAAGTCGAAGA+AGG | + | chr4.4:45292903-45292922 | MS.gene08674:CDS | 50.0% | |
| ACGGCGTGAATCTTGGTCAA+AGG | - | chr4.4:45291504-45291523 | None:intergenic | 50.0% | |
| AGAAGTGGTGAATGGGAGGT+TGG | + | chr4.4:45294671-45294690 | MS.gene08674:CDS | 50.0% | |
| AGCTGGAGATGGGACTACAA+CGG | + | chr4.4:45292513-45292532 | MS.gene08674:CDS | 50.0% | |
| AGGCACAAACGAGTCTTAGC+AGG | + | chr4.4:45291399-45291418 | MS.gene08674:intron | 50.0% | |
| ATTGGCAAGGTTGGACCTGA+TGG | + | chr4.4:45292846-45292865 | MS.gene08674:CDS | 50.0% | |
| CAAAGGGGCTCTCAATTGAG+TGG | - | chr4.4:45293185-45293204 | None:intergenic | 50.0% | |
| CAATTCCAGCCTGCATAGCA+CGG | - | chr4.4:45291523-45291542 | None:intergenic | 50.0% | |
| CACACCTTGTTACCTTCGCA+GGG | - | chr4.4:45294751-45294770 | None:intergenic | 50.0% | |
| CCTTTCCCCTTACCCAAACA+AGG | - | chr4.4:45294377-45294396 | None:intergenic | 50.0% | |
| CGAAGTCGAAGAAGGAATGG+AGG | + | chr4.4:45292911-45292930 | MS.gene08674:CDS | 50.0% | |
| CGTCGAAGTCGAAGAAGGAA+TGG | + | chr4.4:45292908-45292927 | MS.gene08674:CDS | 50.0% | |
| GAGAGTAAGGCCAACAGCAT+CGG | - | chr4.4:45291555-45291574 | None:intergenic | 50.0% | |
| GAGTTCCAGGCCAGTGATTT+GGG | + | chr4.4:45293661-45293680 | MS.gene08674:CDS | 50.0% | |
| GCCATCAAAGCTCCAGGATT+TGG | + | chr4.4:45293286-45293305 | MS.gene08674:CDS | 50.0% | |
| GCTGAAGCAATTGGCAAGGT+TGG | + | chr4.4:45292837-45292856 | MS.gene08674:CDS | 50.0% | |
| GCTGCGTGGTATCCTTAATG+TGG | + | chr4.4:45293261-45293280 | MS.gene08674:CDS | 50.0% | |
| GGACTTCTCAGTGTGACATC+AGG | + | chr4.4:45292568-45292587 | MS.gene08674:CDS | 50.0% | |
| GGATAAAATGCGGCCCTGTT+TGG | + | chr4.4:45291781-45291800 | MS.gene08674:intron | 50.0% | |
| GGATGAGTTTGGCAGTCCTA+AGG | + | chr4.4:45292240-45292259 | MS.gene08674:CDS | 50.0% | |
| GGTAGGAGAACGGAGAATTG+AGG | - | chr4.4:45291275-45291294 | None:intergenic | 50.0% | |
| GGTGGAAGAGCTTGAGAAGT+TGG | + | chr4.4:45292642-45292661 | MS.gene08674:CDS | 50.0% | |
| GGTGGTAGAATCCTTGGAGA+TGG | - | chr4.4:45293740-45293759 | None:intergenic | 50.0% | |
| TGAGGTTGAGGATAGAGCGT+TGG | - | chr4.4:45291257-45291276 | None:intergenic | 50.0% | |
| TGAGTTCCAGGCCAGTGATT+TGG | + | chr4.4:45293660-45293679 | MS.gene08674:CDS | 50.0% | |
| TGCCGAAGATATCACTGGTG+AGG | + | chr4.4:45293213-45293232 | MS.gene08674:CDS | 50.0% | |
| TGCTACAGAGACCGAACTTG+AGG | + | chr4.4:45293915-45293934 | MS.gene08674:CDS | 50.0% | |
| TTCGACGGTTGTCTCAAACG+AGG | - | chr4.4:45292895-45292914 | None:intergenic | 50.0% | |
| TTGGCTAGGCCTGTTAAAGG+TGG | + | chr4.4:45292661-45292680 | MS.gene08674:CDS | 50.0% | |
| ! | AGAATGCTGCTTCAGTGGCT+GGG | + | chr4.4:45294777-45294796 | MS.gene08674:CDS | 50.0% |
| ! | CACGCAGCTTGTTCACAACA+AGG | - | chr4.4:45293249-45293268 | None:intergenic | 50.0% |
| ! | CCTTGTTTGGGTAAGGGGAA+AGG | + | chr4.4:45294374-45294393 | MS.gene08674:intron | 50.0% |
| ! | CTTGTTGTGAACAAGCTGCG+TGG | + | chr4.4:45293247-45293266 | MS.gene08674:CDS | 50.0% |
| ! | TCTGCAGAATGCTGCTTCAG+TGG | + | chr4.4:45294772-45294791 | MS.gene08674:CDS | 50.0% |
| ! | TGGTGCAGCTCTAATTAGGG+AGG | + | chr4.4:45292324-45292343 | MS.gene08674:CDS | 50.0% |
| !! | GAGGAAGGTATTGTTCCTGG+CGG | + | chr4.4:45293988-45294007 | MS.gene08674:CDS | 50.0% |
| !! | GATGCTGTTGGCCTTACTCT+CGG | + | chr4.4:45291554-45291573 | MS.gene08674:CDS | 50.0% |
| !!! | AACGGCTTCGATTTTGGCTC+GGG | + | chr4.4:45292531-45292550 | MS.gene08674:CDS | 50.0% |
| !!! | CAACGGCTTCGATTTTGGCT+CGG | + | chr4.4:45292530-45292549 | MS.gene08674:CDS | 50.0% |
| AGATTCACGCCGTGCTATGC+AGG | + | chr4.4:45291511-45291530 | MS.gene08674:CDS | 55.0% | |
| AGCAGGAAGGCGAACCAACA+TGG | + | chr4.4:45291416-45291435 | MS.gene08674:CDS | 55.0% | |
| GAAGACGCAGATGAGAGGCT+AGG | + | chr4.4:45294066-45294085 | MS.gene08674:CDS | 55.0% | |
| GAAGGCGAACCAACATGGGA+GGG | + | chr4.4:45291421-45291440 | MS.gene08674:CDS | 55.0% | |
| GACGGTTGTCTCAAACGAGG+AGG | - | chr4.4:45292892-45292911 | None:intergenic | 55.0% | |
| GCACACCTTGTTACCTTCGC+AGG | - | chr4.4:45294752-45294771 | None:intergenic | 55.0% | |
| GCAGGAAGGCGAACCAACAT+GGG | + | chr4.4:45291417-45291436 | MS.gene08674:CDS | 55.0% | |
| GCATAGCACGGCGTGAATCT+TGG | - | chr4.4:45291511-45291530 | None:intergenic | 55.0% | |
| GGAGTGGCAGTCATCAAGGT+CGG | + | chr4.4:45293889-45293908 | MS.gene08674:CDS | 55.0% | |
| TCGACCCTGCGAAGGTAACA+AGG | + | chr4.4:45294744-45294763 | MS.gene08674:CDS | 55.0% | |
| TCTCCGTTCTCCTACCAACC+AGG | + | chr4.4:45291279-45291298 | MS.gene08674:CDS | 55.0% | |
| TGGTGGAGTGGCAGTCATCA+AGG | + | chr4.4:45293885-45293904 | MS.gene08674:CDS | 55.0% | |
| ! | CAGAATGCTGCTTCAGTGGC+TGG | + | chr4.4:45294776-45294795 | MS.gene08674:CDS | 55.0% |
| ! | TGGGATGGTCTTGACCACAC+AGG | + | chr4.4:45294796-45294815 | MS.gene08674:CDS | 55.0% |
| !! | ACTGCTAGGTGCTGAGTTCC+AGG | + | chr4.4:45293648-45293667 | MS.gene08674:intron | 55.0% |
| !! | GAAGGTATTGTTCCTGGCGG+AGG | + | chr4.4:45293991-45294010 | MS.gene08674:CDS | 55.0% |
| ACCAATGCTGTACCTCCGCC+AGG | - | chr4.4:45294006-45294025 | None:intergenic | 60.0% | |
| ACTCGGAGAAACTGGCCGAG+AGG | + | chr4.4:45293848-45293867 | MS.gene08674:CDS | 60.0% | |
| GAAGGCCCAAATCACTGGCC+TGG | - | chr4.4:45293669-45293688 | None:intergenic | 60.0% | |
| GGAAGGCGAACCAACATGGG+AGG | + | chr4.4:45291420-45291439 | MS.gene08674:CDS | 60.0% | |
| GTGGCTGCCATCAAAGCTCC+AGG | + | chr4.4:45293280-45293299 | MS.gene08674:CDS | 60.0% | |
| TACCTCGGGGTCCGAGAGTA+AGG | - | chr4.4:45291568-45291587 | None:intergenic | 60.0% | |
| TGGAGTCATCGACCCTGCGA+AGG | + | chr4.4:45294736-45294755 | MS.gene08674:CDS | 60.0% | |
| ! | TCCTGGCGGAGGTACAGCAT+TGG | + | chr4.4:45294002-45294021 | MS.gene08674:CDS | 60.0% |
| ! | TGCTGCTTCAGTGGCTGGGA+TGG | + | chr4.4:45294781-45294800 | MS.gene08674:CDS | 60.0% |
| TCACGCCGTGCTATGCAGGC+TGG | + | chr4.4:45291515-45291534 | MS.gene08674:CDS | 65.0% | |
| GCAGCAGCCACAGCTGCCCT+GGG | - | chr4.4:45294845-45294864 | None:intergenic | 70.0% | |
| GCCACAGCTGCCCTGGGCTT+AGG | - | chr4.4:45294839-45294858 | None:intergenic | 70.0% | |
| GCCTAAGCCCAGGGCAGCTG+TGG | + | chr4.4:45294835-45294854 | MS.gene08674:CDS | 70.0% | |
| GCTGTGGCTGCTGCCCCACA+AGG | + | chr4.4:45294851-45294870 | MS.gene08674:CDS | 70.0% | |
| GGCCTTACTCTCGGACCCCG+AGG | + | chr4.4:45291563-45291582 | MS.gene08674:CDS | 70.0% | |
| GGCAGCAGCCACAGCTGCCC+TGG | - | chr4.4:45294846-45294865 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 45291244 | 45294886 | 45291244 | ID=MS.gene08674 |
| chr4.4 | mRNA | 45291244 | 45294886 | 45291244 | ID=MS.gene08674.t1;Parent=MS.gene08674 |
| chr4.4 | exon | 45291244 | 45291300 | 45291244 | ID=MS.gene08674.t1.exon1;Parent=MS.gene08674.t1 |
| chr4.4 | CDS | 45291244 | 45291300 | 45291244 | ID=cds.MS.gene08674.t1;Parent=MS.gene08674.t1 |
| chr4.4 | exon | 45291401 | 45291584 | 45291401 | ID=MS.gene08674.t1.exon2;Parent=MS.gene08674.t1 |
| chr4.4 | CDS | 45291401 | 45291584 | 45291401 | ID=cds.MS.gene08674.t1;Parent=MS.gene08674.t1 |
| chr4.4 | exon | 45292224 | 45292345 | 45292224 | ID=MS.gene08674.t1.exon3;Parent=MS.gene08674.t1 |
| chr4.4 | CDS | 45292224 | 45292345 | 45292224 | ID=cds.MS.gene08674.t1;Parent=MS.gene08674.t1 |
| chr4.4 | exon | 45292490 | 45292697 | 45292490 | ID=MS.gene08674.t1.exon4;Parent=MS.gene08674.t1 |
| chr4.4 | CDS | 45292490 | 45292697 | 45292490 | ID=cds.MS.gene08674.t1;Parent=MS.gene08674.t1 |
| chr4.4 | exon | 45292787 | 45292932 | 45292787 | ID=MS.gene08674.t1.exon5;Parent=MS.gene08674.t1 |
| chr4.4 | CDS | 45292787 | 45292932 | 45292787 | ID=cds.MS.gene08674.t1;Parent=MS.gene08674.t1 |
| chr4.4 | exon | 45293046 | 45293352 | 45293046 | ID=MS.gene08674.t1.exon6;Parent=MS.gene08674.t1 |
| chr4.4 | CDS | 45293046 | 45293352 | 45293046 | ID=cds.MS.gene08674.t1;Parent=MS.gene08674.t1 |
| chr4.4 | exon | 45293656 | 45294107 | 45293656 | ID=MS.gene08674.t1.exon7;Parent=MS.gene08674.t1 |
| chr4.4 | CDS | 45293656 | 45294107 | 45293656 | ID=cds.MS.gene08674.t1;Parent=MS.gene08674.t1 |
| chr4.4 | exon | 45294599 | 45294886 | 45294599 | ID=MS.gene08674.t1.exon8;Parent=MS.gene08674.t1 |
| chr4.4 | CDS | 45294599 | 45294886 | 45294599 | ID=cds.MS.gene08674.t1;Parent=MS.gene08674.t1 |
| Gene Sequence |
| Protein sequence |
