Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04711.t1 | XP_013449710.1 | 100 | 100 | 0 | 0 | 1 | 100 | 1 | 100 | 1.90E-47 | 198.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04711.t1 | Q9SY09 | 92.0 | 100 | 8 | 0 | 1 | 100 | 1 | 100 | 5.1e-46 | 184.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04711.t1 | I3SQE6 | 100.0 | 100 | 0 | 0 | 1 | 100 | 1 | 100 | 1.3e-47 | 198.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04711 | MS.gene013607 | PPI |
| MS.gene04711 | MS.gene70292 | PPI |
| MS.gene82776 | MS.gene04711 | PPI |
| MS.gene04711 | MS.gene030697 | PPI |
| MS.gene24692 | MS.gene04711 | PPI |
| MS.gene053099 | MS.gene04711 | PPI |
| MS.gene06729 | MS.gene04711 | PPI |
| MS.gene032681 | MS.gene04711 | PPI |
| MS.gene04711 | MS.gene28172 | PPI |
| MS.gene04711 | MS.gene062632 | PPI |
| MS.gene06946 | MS.gene04711 | PPI |
| MS.gene04711 | MS.gene007200 | PPI |
| MS.gene04711 | MS.gene050303 | PPI |
| MS.gene58148 | MS.gene04711 | PPI |
| MS.gene069779 | MS.gene04711 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04711.t1 | MTR_7g094680 | 100.000 | 115 | 0 | 0 | 1 | 115 | 1 | 115 | 8.92e-78 | 224 |
| MS.gene04711.t1 | MTR_1g072370 | 99.130 | 115 | 0 | 1 | 1 | 115 | 1 | 114 | 2.49e-75 | 218 |
| MS.gene04711.t1 | MTR_8g092200 | 28.070 | 114 | 76 | 2 | 4 | 114 | 9 | 119 | 8.94e-12 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04711.t1 | AT4G02840 | 92.857 | 98 | 7 | 0 | 1 | 98 | 1 | 98 | 1.80e-61 | 184 |
| MS.gene04711.t1 | AT3G07590 | 91.579 | 95 | 8 | 0 | 1 | 95 | 1 | 95 | 8.02e-60 | 179 |
| MS.gene04711.t1 | AT3G07590 | 91.579 | 95 | 8 | 0 | 1 | 95 | 1 | 95 | 8.02e-60 | 179 |
| MS.gene04711.t1 | AT4G02840 | 84.259 | 108 | 7 | 1 | 1 | 98 | 1 | 108 | 3.15e-58 | 176 |
| MS.gene04711.t1 | AT3G07590 | 87.879 | 66 | 8 | 0 | 30 | 95 | 4 | 69 | 4.39e-38 | 124 |
| MS.gene04711.t1 | AT1G20580 | 29.245 | 106 | 72 | 1 | 4 | 109 | 9 | 111 | 3.11e-12 | 59.3 |
Find 31 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCTTTGGGGCGAGGACG+GGG | 0.284771 | 7.4:-14502948 | MS.gene04711:CDS |
| GTACCAGCAGTTGGCTTCTT+AGG | 0.317812 | 7.4:+14503087 | None:intergenic |
| CCCCTTTAGAGTTAGCTTAA+CGG | 0.355184 | 7.4:+14503227 | None:intergenic |
| ACCGTTAAGCTAACTCTAAA+GGG | 0.355730 | 7.4:-14503228 | MS.gene04711:CDS |
| CTTCAACAAGTAAAGTTTCA+AGG | 0.362204 | 7.4:+14503127 | None:intergenic |
| CTGAGATGATCCAAAGTAAC+TGG | 0.363042 | 7.4:+14503198 | None:intergenic |
| ATTGCAGGAGGAAAGCCTTT+GGG | 0.380608 | 7.4:-14502960 | MS.gene04711:intron |
| AAAGCCTTTGGGGCGAGGAC+GGG | 0.388156 | 7.4:-14502949 | MS.gene04711:CDS |
| AAGAATGGTACTATTGTTCA+TGG | 0.396668 | 7.4:-14505210 | MS.gene04711:CDS |
| CGCGGTCGTGGACGCGGTCG+TGG | 0.399250 | 7.4:-14502918 | MS.gene04711:CDS |
| GTTTCAAGGTTCAAGCTGTC+AGG | 0.435597 | 7.4:+14503141 | None:intergenic |
| AATTGCAGGAGGAAAGCCTT+TGG | 0.442871 | 7.4:-14502961 | MS.gene04711:intron |
| GAAAGCCTTTGGGGCGAGGA+CGG | 0.445123 | 7.4:-14502950 | MS.gene04711:CDS |
| CGAGGACGCGGTCGTGGACG+CGG | 0.450923 | 7.4:-14502924 | MS.gene04711:CDS |
| AACCGTTAAGCTAACTCTAA+AGG | 0.451979 | 7.4:-14503229 | MS.gene04711:CDS |
| GTGATACCTAACGAGCTTCA+TGG | 0.454978 | 7.4:+14505355 | None:intergenic |
| CCACCACCATGAAGCTCGTT+AGG | 0.465256 | 7.4:-14505361 | None:intergenic |
| AGCCTTTGGGGCGAGGACGG+GGG | 0.474600 | 7.4:-14502947 | MS.gene04711:CDS |
| GGAGGAAAGCCTTTGGGGCG+AGG | 0.495880 | 7.4:-14502954 | MS.gene04711:CDS |
| TACTTGTTGAAGAAGCTCCT+AGG | 0.498295 | 7.4:-14503116 | MS.gene04711:CDS |
| ACTTGTTGAAGAAGCTCCTA+GGG | 0.502700 | 7.4:-14503115 | MS.gene04711:CDS |
| GGCTTCTTAGGCTTGACCCT+AGG | 0.525010 | 7.4:+14503099 | None:intergenic |
| GTCTCAATCGAGTTGAAGAA+TGG | 0.539433 | 7.4:-14505225 | MS.gene04711:CDS |
| ATTGTTCATGGCACTATCAC+AGG | 0.543560 | 7.4:-14505198 | MS.gene04711:intron |
| AAGCCTAAGAAGCCAACTGC+TGG | 0.548844 | 7.4:-14503090 | MS.gene04711:intron |
| TTGCAGGAGGAAAGCCTTTG+GGG | 0.577723 | 7.4:-14502959 | MS.gene04711:intron |
| ATTCTTCAACTCGATTGAGA+CGG | 0.606708 | 7.4:+14505227 | None:intergenic |
| TTGGATCATCTCAGTGTGAG+AGG | 0.610982 | 7.4:-14503189 | MS.gene04711:CDS |
| CAAGGTTCAAGCTGTCAGGA+AGG | 0.613711 | 7.4:+14503145 | None:intergenic |
| CCGTTAAGCTAACTCTAAAG+GGG | 0.635466 | 7.4:-14503227 | MS.gene04711:CDS |
| TCGTATACAGTACCAGCAGT+TGG | 0.655537 | 7.4:+14503078 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAATAATAATTA+GGG | + | chr7.4:14503173-14503192 | None:intergenic | 0.0% |
| !! | TAATAATAATAATAATAATT+AGG | + | chr7.4:14503174-14503193 | None:intergenic | 0.0% |
| !! | ATAATAATAATAGAGAAAAT+AGG | + | chr7.4:14503391-14503410 | None:intergenic | 10.0% |
| !! | AAGATTACCAAAAATATATA+CGG | + | chr7.4:14504375-14504394 | None:intergenic | 15.0% |
| !! | ACAATTAGTATACAAAAATA+TGG | + | chr7.4:14504450-14504469 | None:intergenic | 15.0% |
| !! | TATTATTATTACGAGTTTAA+TGG | - | chr7.4:14503210-14503229 | MS.gene04711:CDS | 15.0% |
| !! | TTTAAATACTTTCTTATTCT+TGG | - | chr7.4:14504181-14504200 | MS.gene04711:intron | 15.0% |
| !!! | TACAAATTATGTTTTGATTA+TGG | - | chr7.4:14504399-14504418 | MS.gene04711:intron | 15.0% |
| !! | ATTAAAAAGTGAATGCATAT+CGG | - | chr7.4:14504870-14504889 | MS.gene04711:intron | 20.0% |
| !! | TCATCAATTGTAAGTTTAAA+AGG | - | chr7.4:14504648-14504667 | MS.gene04711:intron | 20.0% |
| !!! | AAAGTTTTGATTTTAATTGC+AGG | - | chr7.4:14505289-14505308 | MS.gene04711:intron | 20.0% |
| ! | AAAAAATAAGCCAATCCAAT+TGG | - | chr7.4:14503891-14503910 | MS.gene04711:intron | 25.0% |
| ! | AAAAATAAGCCAATCCAATT+GGG | - | chr7.4:14503892-14503911 | MS.gene04711:intron | 25.0% |
| ! | AAAAATAAGTCAATCCAAAC+GGG | + | chr7.4:14503701-14503720 | None:intergenic | 25.0% |
| ! | AAATTAGGGTTTAAGAAAAG+CGG | + | chr7.4:14503115-14503134 | None:intergenic | 25.0% |
| ! | AACAGTAAACAAGAACAAAA+AGG | + | chr7.4:14502944-14502963 | None:intergenic | 25.0% |
| ! | AAGCATGTTTGATAAACTAA+TGG | - | chr7.4:14504473-14504492 | MS.gene04711:intron | 25.0% |
| ! | ACAGTAAACAAGAACAAAAA+GGG | + | chr7.4:14502943-14502962 | None:intergenic | 25.0% |
| ! | ACTGTCATATAGAAAATAAC+AGG | + | chr7.4:14503647-14503666 | None:intergenic | 25.0% |
| ! | ATTACTTGTACAACATATCT+AGG | - | chr7.4:14503674-14503693 | MS.gene04711:intron | 25.0% |
| ! | ATTAGGGTTTAACAAAAATG+TGG | + | chr7.4:14503157-14503176 | None:intergenic | 25.0% |
| ! | CAAAAATAAGTCAATCCAAA+CGG | + | chr7.4:14503702-14503721 | None:intergenic | 25.0% |
| ! | CCCACTAAATTAAGAAAAAA+GGG | + | chr7.4:14503938-14503957 | None:intergenic | 25.0% |
| ! | CTGTCATATAGAAAATAACA+GGG | + | chr7.4:14503646-14503665 | None:intergenic | 25.0% |
| ! | GAAGTTGTTCGTAATATTAT+AGG | + | chr7.4:14503583-14503602 | None:intergenic | 25.0% |
| ! | GATTGTTATCTATGTATTTC+TGG | - | chr7.4:14505261-14505280 | MS.gene04711:intron | 25.0% |
| ! | GTTTAAAAACAGATCTATTG+TGG | + | chr7.4:14503482-14503501 | None:intergenic | 25.0% |
| ! | TGAATCCTTGTATTCTAAAT+TGG | - | chr7.4:14504787-14504806 | MS.gene04711:intron | 25.0% |
| ! | TTACTTGTACAACATATCTA+GGG | - | chr7.4:14503675-14503694 | MS.gene04711:intron | 25.0% |
| ! | TTTAATACAAGGAAATTCCT+CGG | + | chr7.4:14504856-14504875 | None:intergenic | 25.0% |
| ! | TTTATTTCATAAGCTTGTCA+AGG | + | chr7.4:14503835-14503854 | None:intergenic | 25.0% |
| !! | ATTAGTTTATCAAACATGCT+TGG | + | chr7.4:14504474-14504493 | None:intergenic | 25.0% |
| !! | ATTTTAGACTGAGATTGAAA+AGG | + | chr7.4:14502969-14502988 | None:intergenic | 25.0% |
| !! | GTGCTTAATTTGATTGTATA+TGG | + | chr7.4:14504834-14504853 | None:intergenic | 25.0% |
| !! | TATTGCCAATTTAGAATACA+AGG | + | chr7.4:14504795-14504814 | None:intergenic | 25.0% |
| !!! | CAATAGATCTGTTTTTAAAC+TGG | - | chr7.4:14503482-14503501 | MS.gene04711:intron | 25.0% |
| !!! | CCCTTTTTTCTTAATTTAGT+GGG | - | chr7.4:14503935-14503954 | MS.gene04711:intron | 25.0% |
| !!! | TATTTTTCCTTGCTTTTCTT+TGG | - | chr7.4:14504102-14504121 | MS.gene04711:intron | 25.0% |
| !!! | TCCCTTTTTTCTTAATTTAG+TGG | - | chr7.4:14503934-14503953 | MS.gene04711:intron | 25.0% |
| !!! | TGCATTCACTTTTTAATACA+AGG | + | chr7.4:14504867-14504886 | None:intergenic | 25.0% |
| !!! | TTTTGATCTTGCTTTAGAAT+AGG | - | chr7.4:14504077-14504096 | MS.gene04711:intron | 25.0% |
| AACAATCCAACTAGACATAA+TGG | + | chr7.4:14505248-14505267 | None:intergenic | 30.0% | |
| AAGAATGGTACTATTGTTCA+TGG | - | chr7.4:14503054-14503073 | MS.gene04711:intron | 30.0% | |
| AAGGGAATCCATATTCTATT+AGG | + | chr7.4:14503920-14503939 | None:intergenic | 30.0% | |
| AATATCACATTTACCATGCA+AGG | + | chr7.4:14504211-14504230 | None:intergenic | 30.0% | |
| ACCAAAAATATATACGGCAA+AGG | + | chr7.4:14504369-14504388 | None:intergenic | 30.0% | |
| ACTTACTAATCCTAACTTTC+CGG | - | chr7.4:14504581-14504600 | MS.gene04711:intron | 30.0% | |
| AGGGAATCCATATTCTATTA+GGG | + | chr7.4:14503919-14503938 | None:intergenic | 30.0% | |
| ATTTGACATGAGCTGTTAAT+TGG | - | chr7.4:14503548-14503567 | MS.gene04711:intron | 30.0% | |
| CTTCAACAAGTAAAGTTTCA+AGG | + | chr7.4:14505140-14505159 | None:intergenic | 30.0% | |
| GCCCACTAAATTAAGAAAAA+AGG | + | chr7.4:14503939-14503958 | None:intergenic | 30.0% | |
| ! | AATTGATGACCACATAATTC+TGG | + | chr7.4:14504637-14504656 | None:intergenic | 30.0% |
| ! | ATTGATGACCACATAATTCT+GGG | + | chr7.4:14504636-14504655 | None:intergenic | 30.0% |
| ! | GAAAGTTAGGATTAGTAAGT+TGG | + | chr7.4:14504581-14504600 | None:intergenic | 30.0% |
| ! | TCCTTTGCCGTATATATTTT+TGG | - | chr7.4:14504365-14504384 | MS.gene04711:intron | 30.0% |
| !! | TCTTGCCTTTTATTTGTGAT+GGG | - | chr7.4:14504922-14504941 | MS.gene04711:intron | 30.0% |
| !! | TTCTTGCCTTTTATTTGTGA+TGG | - | chr7.4:14504921-14504940 | MS.gene04711:intron | 30.0% |
| !!! | GTTTTGATTTTAATTGCAGG+AGG | - | chr7.4:14505292-14505311 | MS.gene04711:intron | 30.0% |
| !!! | TACATACGAAGCATTGTTTT+GGG | - | chr7.4:14503452-14503471 | MS.gene04711:intron | 30.0% |
| !!! | TTACATACGAAGCATTGTTT+TGG | - | chr7.4:14503451-14503470 | MS.gene04711:intron | 30.0% |
| AAAATTTACCAGTAGACCCT+AGG | - | chr7.4:14504032-14504051 | MS.gene04711:intron | 35.0% | |
| AAACAAGAACAAAAAGGGAG+AGG | + | chr7.4:14502938-14502957 | None:intergenic | 35.0% | |
| AACCGTTAAGCTAACTCTAA+AGG | - | chr7.4:14505035-14505054 | MS.gene04711:intron | 35.0% | |
| AAGTTGGAAAGCTACACTAA+TGG | + | chr7.4:14504565-14504584 | None:intergenic | 35.0% | |
| AATCTAACAAGAAGCTACCT+AGG | + | chr7.4:14504052-14504071 | None:intergenic | 35.0% | |
| ACCGTTAAGCTAACTCTAAA+GGG | - | chr7.4:14505036-14505055 | MS.gene04711:intron | 35.0% | |
| AGAAAACAATGAGCTGACAA+CGG | + | chr7.4:14504340-14504359 | None:intergenic | 35.0% | |
| ATCTAACAAGAAGCTACCTA+GGG | + | chr7.4:14504051-14504070 | None:intergenic | 35.0% | |
| ATTCTTCAACTCGATTGAGA+CGG | + | chr7.4:14503040-14503059 | None:intergenic | 35.0% | |
| CAAAGCACAGAGCAAAATTA+GGG | + | chr7.4:14503129-14503148 | None:intergenic | 35.0% | |
| GGGAATCCATATTCTATTAG+GGG | + | chr7.4:14503918-14503937 | None:intergenic | 35.0% | |
| GTTTAAAAGGTCCAATGTGT+AGG | - | chr7.4:14504661-14504680 | MS.gene04711:intron | 35.0% | |
| TATTCTTGGTTATCCTTGCA+TGG | - | chr7.4:14504195-14504214 | MS.gene04711:intron | 35.0% | |
| TGTCAAATGTCGAAATCTTG+CGG | + | chr7.4:14503536-14503555 | None:intergenic | 35.0% | |
| ! | ATAATTCTGGGGGATTCAAT+TGG | + | chr7.4:14504624-14504643 | None:intergenic | 35.0% |
| ! | GGAATTCCAAGTAAGTTGAA+GGG | + | chr7.4:14503515-14503534 | None:intergenic | 35.0% |
| ! | GTGAACATGATTTGTGAGTA+TGG | - | chr7.4:14504764-14504783 | MS.gene04711:intron | 35.0% |
| ! | TACAATCAAATTAAGCACCG+AGG | - | chr7.4:14504836-14504855 | MS.gene04711:intron | 35.0% |
| ! | TACTAATTAGCTCTTCACCT+TGG | + | chr7.4:14503614-14503633 | None:intergenic | 35.0% |
| ! | TTGATGACCACATAATTCTG+GGG | + | chr7.4:14504635-14504654 | None:intergenic | 35.0% |
| !! | AGTTCTTGATTTGTCGTTTC+TGG | - | chr7.4:14504145-14504164 | MS.gene04711:intron | 35.0% |
| !! | CTTGCCTTTTATTTGTGATG+GGG | - | chr7.4:14504923-14504942 | MS.gene04711:intron | 35.0% |
| AAGAACAAAAAGGGAGAGGA+AGG | + | chr7.4:14502934-14502953 | None:intergenic | 40.0% | |
| AATGGAACAGGCATTAGAGA+TGG | + | chr7.4:14504547-14504566 | None:intergenic | 40.0% | |
| ACTGTCCGATTGTACAGATA+AGG | + | chr7.4:14504279-14504298 | None:intergenic | 40.0% | |
| ACTTCTCCCTTCAACTTACT+TGG | - | chr7.4:14503506-14503525 | MS.gene04711:intron | 40.0% | |
| ATCAAATCACCCCACTGTAA+TGG | + | chr7.4:14503306-14503325 | None:intergenic | 40.0% | |
| ATGGAACAGGCATTAGAGAT+GGG | + | chr7.4:14504546-14504565 | None:intergenic | 40.0% | |
| ATTACAGTGGGGTGATTTGA+TGG | - | chr7.4:14503305-14503324 | MS.gene04711:intron | 40.0% | |
| ATTGGGCCCCTAATAGAATA+TGG | - | chr7.4:14503909-14503928 | MS.gene04711:intron | 40.0% | |
| ATTGTTCATGGCACTATCAC+AGG | - | chr7.4:14503066-14503085 | MS.gene04711:intron | 40.0% | |
| CAGAACACCAAAGAAAAGCA+AGG | + | chr7.4:14504112-14504131 | None:intergenic | 40.0% | |
| CATATCATGCCATTACAGTG+GGG | - | chr7.4:14503294-14503313 | MS.gene04711:intron | 40.0% | |
| CCAAATGTTGATGTTCTGTC+TGG | - | chr7.4:14503958-14503977 | MS.gene04711:intron | 40.0% | |
| CCAGACAGAACATCAACATT+TGG | + | chr7.4:14503961-14503980 | None:intergenic | 40.0% | |
| CCATATCATGCCATTACAGT+GGG | - | chr7.4:14503293-14503312 | MS.gene04711:intron | 40.0% | |
| CTCACCCCATCACAAATAAA+AGG | + | chr7.4:14504930-14504949 | None:intergenic | 40.0% | |
| CTGAGATGATCCAAAGTAAC+TGG | + | chr7.4:14505069-14505088 | None:intergenic | 40.0% | |
| CTGTCCGATTGTACAGATAA+GGG | + | chr7.4:14504278-14504297 | None:intergenic | 40.0% | |
| GAAAGCTACACTAATGGAAC+AGG | + | chr7.4:14504559-14504578 | None:intergenic | 40.0% | |
| GCAAAGCACAGAGCAAAATT+AGG | + | chr7.4:14503130-14503149 | None:intergenic | 40.0% | |
| GCTGATGATATTGCAGCATA+TGG | + | chr7.4:14504428-14504447 | None:intergenic | 40.0% | |
| GGGGAAAAATCCAGTTACTT+TGG | - | chr7.4:14505056-14505075 | MS.gene04711:intron | 40.0% | |
| GTAACAAAGCAACAAGTCCA+AGG | + | chr7.4:14504982-14505001 | None:intergenic | 40.0% | |
| TAGTAGACACACCTACACAT+TGG | + | chr7.4:14504675-14504694 | None:intergenic | 40.0% | |
| TATCTGTACAATCGGACAGT+AGG | - | chr7.4:14504279-14504298 | MS.gene04711:intron | 40.0% | |
| TATTCTATTAGGGGCCCAAT+TGG | + | chr7.4:14503909-14503928 | None:intergenic | 40.0% | |
| TCAGAGCCATTATGTCTAGT+TGG | - | chr7.4:14505239-14505258 | MS.gene04711:CDS | 40.0% | |
| TCCATATCATGCCATTACAG+TGG | - | chr7.4:14503292-14503311 | MS.gene04711:intron | 40.0% | |
| TCTCCCCTTATCTGTACAAT+CGG | - | chr7.4:14504271-14504290 | MS.gene04711:intron | 40.0% | |
| TGACAACGGTTGAAGAGAAT+TGG | + | chr7.4:14504326-14504345 | None:intergenic | 40.0% | |
| TGAGAAATCTGCACGAGATT+TGG | + | chr7.4:14502999-14503018 | None:intergenic | 40.0% | |
| TGATGACCACATAATTCTGG+GGG | + | chr7.4:14504634-14504653 | None:intergenic | 40.0% | |
| TGTCCGATTGTACAGATAAG+GGG | + | chr7.4:14504277-14504296 | None:intergenic | 40.0% | |
| TTGAATCCCCCAGAATTATG+TGG | - | chr7.4:14504625-14504644 | MS.gene04711:intron | 40.0% | |
| ! | ACTTGTTGAAGAAGCTCCTA+GGG | - | chr7.4:14505149-14505168 | MS.gene04711:intron | 40.0% |
| ! | CCGTTAAGCTAACTCTAAAG+GGG | - | chr7.4:14505037-14505056 | MS.gene04711:intron | 40.0% |
| ! | CGGAATTCCAAGTAAGTTGA+AGG | + | chr7.4:14503516-14503535 | None:intergenic | 40.0% |
| ! | GAGAAACAGCTGACTTCAAT+TGG | + | chr7.4:14503274-14503293 | None:intergenic | 40.0% |
| ! | GCATTAGTTGTACTGATCCT+TGG | - | chr7.4:14504962-14504981 | MS.gene04711:intron | 40.0% |
| ! | TACTTGTTGAAGAAGCTCCT+AGG | - | chr7.4:14505148-14505167 | MS.gene04711:intron | 40.0% |
| !! | CCCCTTTAGAGTTAGCTTAA+CGG | + | chr7.4:14505040-14505059 | None:intergenic | 40.0% |
| !! | GTCTCAATCGAGTTGAAGAA+TGG | - | chr7.4:14503039-14503058 | MS.gene04711:intron | 40.0% |
| !! | TGGACTTGTTGCTTTGTTAC+AGG | - | chr7.4:14504982-14505001 | MS.gene04711:intron | 40.0% |
| !! | TTTCTTTGGTGTTCTGCTCT+GGG | - | chr7.4:14504116-14504135 | MS.gene04711:intron | 40.0% |
| !!! | TTTTCTTTGGTGTTCTGCTC+TGG | - | chr7.4:14504115-14504134 | MS.gene04711:intron | 40.0% |
| AACAACTTCCTGTCTTGCCA+AGG | - | chr7.4:14503594-14503613 | MS.gene04711:intron | 45.0% | |
| AATTGCAGGAGGAAAGCCTT+TGG | - | chr7.4:14505303-14505322 | MS.gene04711:intron | 45.0% | |
| ATGGAGTACACGGTTGCTAT+TGG | - | chr7.4:14503324-14503343 | MS.gene04711:intron | 45.0% | |
| ATTGCAGGAGGAAAGCCTTT+GGG | - | chr7.4:14505304-14505323 | MS.gene04711:intron | 45.0% | |
| CCCACTGTAATGGCATGATA+TGG | + | chr7.4:14503296-14503315 | None:intergenic | 45.0% | |
| GGGATTCAATTGGAGGAGAA+TGG | + | chr7.4:14504614-14504633 | None:intergenic | 45.0% | |
| GGGTGATTTGATGGAGTACA+CGG | - | chr7.4:14503314-14503333 | MS.gene04711:intron | 45.0% | |
| GTTTCAAGGTTCAAGCTGTC+AGG | + | chr7.4:14505126-14505145 | None:intergenic | 45.0% | |
| TATTAGGGGCCCAATTGGAT+TGG | + | chr7.4:14503904-14503923 | None:intergenic | 45.0% | |
| TCGTATACAGTACCAGCAGT+TGG | + | chr7.4:14505189-14505208 | None:intergenic | 45.0% | |
| TGGTGTGTTTCCGGAAAGTT+AGG | + | chr7.4:14504594-14504613 | None:intergenic | 45.0% | |
| TTGGATCATCTCAGTGTGAG+AGG | - | chr7.4:14505075-14505094 | MS.gene04711:intron | 45.0% | |
| ! | ATTCTGGGGGATTCAATTGG+AGG | + | chr7.4:14504621-14504640 | None:intergenic | 45.0% |
| ! | ATTTGTGATGGGGTGAGAAG+TGG | - | chr7.4:14504933-14504952 | MS.gene04711:intron | 45.0% |
| ! | GTTGATGTTCTGTCTGGAGT+TGG | - | chr7.4:14503964-14503983 | MS.gene04711:intron | 45.0% |
| AAGCCTAAGAAGCCAACTGC+TGG | - | chr7.4:14505174-14505193 | MS.gene04711:intron | 50.0% | |
| AGAAGCTACCTAGGGTCTAC+TGG | + | chr7.4:14504043-14504062 | None:intergenic | 50.0% | |
| CAAGGTTCAAGCTGTCAGGA+AGG | + | chr7.4:14505122-14505141 | None:intergenic | 50.0% | |
| CTGTACAATCGGACAGTAGG+AGG | - | chr7.4:14504282-14504301 | MS.gene04711:intron | 50.0% | |
| GGAGGAGAATGGTGTGTTTC+CGG | + | chr7.4:14504603-14504622 | None:intergenic | 50.0% | |
| TGATGGGGTGAGAAGTGGTT+TGG | - | chr7.4:14504938-14504957 | MS.gene04711:intron | 50.0% | |
| TTGCAGGAGGAAAGCCTTTG+GGG | - | chr7.4:14505305-14505324 | MS.gene04711:intron | 50.0% | |
| ! | CAACATATCTAGGGCCCGTT+TGG | - | chr7.4:14503684-14503703 | MS.gene04711:intron | 50.0% |
| ! | CAGATGCACTGACGCTGTAT+AGG | + | chr7.4:14504510-14504529 | None:intergenic | 50.0% |
| ! | GTACCAGCAGTTGGCTTCTT+AGG | + | chr7.4:14505180-14505199 | None:intergenic | 50.0% |
| GCTCTTCACCTTGGCAAGAC+AGG | + | chr7.4:14503605-14503624 | None:intergenic | 55.0% | |
| GGCTTCTTAGGCTTGACCCT+AGG | + | chr7.4:14505168-14505187 | None:intergenic | 55.0% | |
| !! | AAAGCCTTTGGGGCGAGGAC+GGG | - | chr7.4:14505315-14505334 | MS.gene04711:intron | 60.0% |
| !! | GAAAGCCTTTGGGGCGAGGA+CGG | - | chr7.4:14505314-14505333 | MS.gene04711:intron | 60.0% |
| !! | AAGCCTTTGGGGCGAGGACG+GGG | - | chr7.4:14505316-14505335 | MS.gene04711:intron | 65.0% |
| !! | GGAGGAAAGCCTTTGGGGCG+AGG | - | chr7.4:14505310-14505329 | MS.gene04711:intron | 65.0% |
| !! | AGCCTTTGGGGCGAGGACGG+GGG | - | chr7.4:14505317-14505336 | MS.gene04711:intron | 70.0% |
| CGAGGACGCGGTCGTGGACG+CGG | - | chr7.4:14505340-14505359 | MS.gene04711:intron | 75.0% | |
| ! | CGAGGACGGGGGCGAGGACG+CGG | - | chr7.4:14505328-14505347 | MS.gene04711:intron | 80.0% |
| ! | CGCCCCCGTCCTCGCCCCAA+AGG | + | chr7.4:14505322-14505341 | None:intergenic | 80.0% |
| ! | CGCGGTCGTGGACGCGGTCG+TGG | - | chr7.4:14505346-14505365 | MS.gene04711:intron | 80.0% |
| ! | TTGGGGCGAGGACGGGGGCG+AGG | - | chr7.4:14505322-14505341 | MS.gene04711:intron | 80.0% |
| ! | CGGGGGCGAGGACGCGGTCG+TGG | - | chr7.4:14505334-14505353 | MS.gene04711:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 14502911 | 14505375 | 14502911 | ID=MS.gene04711 |
| chr7.4 | mRNA | 14502911 | 14505375 | 14502911 | ID=MS.gene04711.t1;Parent=MS.gene04711 |
| chr7.4 | exon | 14505362 | 14505375 | 14505362 | ID=MS.gene04711.t1.exon1;Parent=MS.gene04711.t1 |
| chr7.4 | CDS | 14505362 | 14505375 | 14505362 | ID=cds.MS.gene04711.t1;Parent=MS.gene04711.t1 |
| chr7.4 | exon | 14505199 | 14505275 | 14505199 | ID=MS.gene04711.t1.exon2;Parent=MS.gene04711.t1 |
| chr7.4 | CDS | 14505199 | 14505275 | 14505199 | ID=cds.MS.gene04711.t1;Parent=MS.gene04711.t1 |
| chr7.4 | exon | 14503091 | 14503282 | 14503091 | ID=MS.gene04711.t1.exon3;Parent=MS.gene04711.t1 |
| chr7.4 | CDS | 14503091 | 14503282 | 14503091 | ID=cds.MS.gene04711.t1;Parent=MS.gene04711.t1 |
| chr7.4 | exon | 14502911 | 14502975 | 14502911 | ID=MS.gene04711.t1.exon4;Parent=MS.gene04711.t1 |
| chr7.4 | CDS | 14502911 | 14502975 | 14502911 | ID=cds.MS.gene04711.t1;Parent=MS.gene04711.t1 |
| Gene Sequence |
| Protein sequence |
