AlfalfaGEDB | MS.gene58148

M. sativa cultivar XinJiangDaYe / MS.gene58148

KEGG: K11088
GO: GO:0000387 GO:0005575 GO:0005681 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0022618 GO:0032991 GO:0034622 GO:0043933 GO:0065003 GO:0071826 GO:0071840 GO:1990904
PFAM: PF01423.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58148.t1	XP_003630137.1	100	131	0	0	1	131	1	131	7.00E-51	209.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58148.t1	Q9LM92	93.6	94	6	0	1	94	1	94	2.6e-46	186.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58148.t1	G7LBD3	100.0	131	0	0	1	131	1	131	5.1e-51	209.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050290	MS.gene58148	0.837198	5.99E-57	-1.69E-46
MS.gene050752	MS.gene58148	0.800789	1.22E-48	-1.69E-46
MS.gene051746	MS.gene58148	0.805879	1.08E-49	-1.69E-46
MS.gene051748	MS.gene58148	0.802215	6.24E-49	-1.69E-46
MS.gene051903	MS.gene58148	0.813405	2.60E-51	-1.69E-46
MS.gene054937	MS.gene58148	0.8851	1.09E-71	-1.69E-46
MS.gene056075	MS.gene58148	0.816046	6.77E-52	-1.69E-46
MS.gene057206	MS.gene58148	0.837648	4.59E-57	-1.69E-46
MS.gene057235	MS.gene58148	0.826303	2.92E-54	-1.69E-46
MS.gene058245	MS.gene58148	0.804366	2.24E-49	-1.69E-46
MS.gene060856	MS.gene58148	0.836494	9.06E-57	-1.69E-46
MS.gene061145	MS.gene58148	0.83453	2.84E-56	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene58148	MS.gene062632	PPI
MS.gene58148	MS.gene83565	PPI
MS.gene065862	MS.gene58148	PPI
MS.gene58148	MS.gene002376	PPI
MS.gene58148	MS.gene067444	PPI
MS.gene58148	MS.gene007200	PPI
MS.gene58148	MS.gene050303	PPI
MS.gene036800	MS.gene58148	PPI
MS.gene068867	MS.gene58148	PPI
MS.gene58148	MS.gene060774	PPI
MS.gene06729	MS.gene58148	PPI
MS.gene58148	MS.gene85931	PPI
MS.gene92231	MS.gene58148	PPI
MS.gene58148	MS.gene86968	PPI
MS.gene59047	MS.gene58148	PPI
MS.gene58148	MS.gene023131	PPI
MS.gene58148	MS.gene009798	PPI
MS.gene58148	MS.gene97334	PPI
MS.gene58148	MS.gene62660	PPI
MS.gene59503	MS.gene58148	PPI
MS.gene58148	MS.gene56983	PPI
MS.gene58148	MS.gene90813	PPI
MS.gene58148	MS.gene029082	PPI
MS.gene58148	MS.gene015624	PPI
MS.gene50211	MS.gene58148	PPI
MS.gene58148	MS.gene065853	PPI
MS.gene83322	MS.gene58148	PPI
MS.gene069779	MS.gene58148	PPI
MS.gene58148	MS.gene035486	PPI
MS.gene58148	MS.gene013607	PPI
MS.gene95848	MS.gene58148	PPI
MS.gene038837	MS.gene58148	PPI
MS.gene58148	MS.gene067362	PPI
MS.gene58148	MS.gene36469	PPI
MS.gene58148	MS.gene073888	PPI
MS.gene070248	MS.gene58148	PPI
MS.gene58148	MS.gene055778	PPI
MS.gene06946	MS.gene58148	PPI
MS.gene58148	MS.gene053443	PPI
MS.gene006712	MS.gene58148	PPI
MS.gene58148	MS.gene01351	PPI
MS.gene58148	MS.gene48652	PPI
MS.gene58148	MS.gene62426	PPI
MS.gene58148	MS.gene035725	PPI
MS.gene61498	MS.gene58148	PPI
MS.gene58148	MS.gene022597	PPI
MS.gene58148	MS.gene35064	PPI
MS.gene58148	MS.gene028322	PPI
MS.gene046119	MS.gene58148	PPI
MS.gene58148	MS.gene056601	PPI
MS.gene045843	MS.gene58148	PPI
MS.gene58148	MS.gene032681	PPI
MS.gene58148	MS.gene67483	PPI
MS.gene58148	MS.gene028393	PPI
MS.gene53517	MS.gene58148	PPI
MS.gene58148	MS.gene012386	PPI
MS.gene58148	MS.gene065857	PPI
MS.gene64804	MS.gene58148	PPI
MS.gene58148	MS.gene043867	PPI
MS.gene058567	MS.gene58148	PPI
MS.gene58148	MS.gene065836	PPI
MS.gene58148	MS.gene018076	PPI
MS.gene58148	MS.gene35136	PPI
MS.gene58148	MS.gene93333	PPI
MS.gene24692	MS.gene58148	PPI
MS.gene053099	MS.gene58148	PPI
MS.gene58148	MS.gene04711	PPI
MS.gene58148	MS.gene070731	PPI
MS.gene58148	MS.gene040757	PPI
MS.gene58148	MS.gene047509	PPI
MS.gene045470	MS.gene58148	PPI
MS.gene58148	MS.gene043455	PPI
MS.gene58148	MS.gene28762	PPI
MS.gene58148	MS.gene073734	PPI
MS.gene58148	MS.gene31434	PPI
MS.gene82776	MS.gene58148	PPI
MS.gene028868	MS.gene58148	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58148.t1	MTR_8g092200	100.000	131	0	0	1	131	1	131	5.23e-95	270
MS.gene58148.t1	MTR_8g058537	36.111	72	45	1	7	77	2	73	1.09e-12	61.2
MS.gene58148.t1	MTR_8g058420	36.111	72	45	1	7	77	2	73	1.09e-12	61.2
MS.gene58148.t1	MTR_8g091620	36.111	72	45	1	7	77	2	73	1.41e-12	61.2
MS.gene58148.t1	MTR_7g108700	36.111	72	45	1	7	77	2	73	1.60e-12	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58148.t1	AT1G20580	84.091	132	19	2	1	131	1	131	1.09e-71	211
MS.gene58148.t1	AT1G76300	77.863	131	26	2	1	131	1	128	7.54e-69	203
MS.gene58148.t1	AT5G27720	36.111	72	45	1	7	77	2	73	2.49e-12	60.1

Find 46 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTGGCCGTGGAGCTCCGCC+TGG	0.291361	4.2:+9942187	MS.gene58148:CDS
ATACTAATGTGACAGGTTTA+TGG	0.302035	4.2:+9941822	MS.gene58148:intron
AAAGAAGATGAGTCGTAGTT+TGG	0.344374	4.2:+9940445	None:intergenic
TGATTGAGTGTGAGGATAAC+TGG	0.357866	4.2:+9940552	MS.gene58148:CDS
GAGTCGTAGTTTGGGAATTC+CGG	0.364238	4.2:+9940454	MS.gene58148:CDS
CCGTGGAGCTCCGCCTGGGA+GGG	0.368506	4.2:+9942192	MS.gene58148:CDS
CGTGGAGCTCCGCCTGGGAG+GGG	0.398677	4.2:+9942193	MS.gene58148:CDS
TAGGCTCAAGCTGCTGGCCG+TGG	0.412883	4.2:+9942175	MS.gene58148:intron
AAGAAGATGAGTCGTAGTTT+GGG	0.420399	4.2:+9940446	None:intergenic
GCCGTGGAGCTCCGCCTGGG+AGG	0.444968	4.2:+9942191	MS.gene58148:CDS
CCTGTGTAGGCTCAAGCTGC+TGG	0.451467	4.2:+9942169	MS.gene58148:intron
CTTGAGCATGTATTTATTCG+AGG	0.458500	4.2:+9941686	MS.gene58148:CDS
GCCTCGTGGAGGAGCTTCAC+CGG	0.468346	4.2:-9940473	None:intergenic
CTGGCCGTGGAGCTCCGCCT+GGG	0.468800	4.2:+9942188	MS.gene58148:CDS
TTATTCGAGGTAGCAAAGTC+AGG	0.472481	4.2:+9941699	MS.gene58148:CDS
TGCATCTAAACGCTTGAACA+TGG	0.482856	4.2:-9941872	None:intergenic
GGAGCGTTCTTCAGCATGTC+GGG	0.484052	4.2:-9941850	None:intergenic
GCATCGCTTGGTGTTGGTAG+AGG	0.487013	4.2:+9941998	MS.gene58148:CDS
AAGCTCCTCCACGAGGCCTC+CGG	0.500533	4.2:+9940479	MS.gene58148:CDS
AAGGGCAAGGGTGCATCGCT+TGG	0.512282	4.2:+9941986	MS.gene58148:intron
CCCTCCCAGGCGGAGCTCCA+CGG	0.537318	4.2:-9942192	None:intergenic
AAGGGTGCATCGCTTGGTGT+TGG	0.544000	4.2:+9941992	MS.gene58148:CDS
AAGCATCACTTACACTGCTA+AGG	0.553810	4.2:+9940589	MS.gene58148:CDS
GCGTTTAGATGCAAGAATCA+AGG	0.557683	4.2:+9941882	MS.gene58148:CDS
CTGAATATCTTGAAGGGCAA+GGG	0.558094	4.2:+9941974	MS.gene58148:intron
AATGATGATCACCTCCTCAC+TGG	0.558350	4.2:-9942223	None:intergenic
CTCCACCGTGACGACGTGGC+CGG	0.561230	4.2:-9940498	None:intergenic
GCATCTAAACGCTTGAACAT+GGG	0.565911	4.2:-9941871	None:intergenic
ACTGGTGGTACACCCCTCCC+AGG	0.566465	4.2:-9942205	None:intergenic
AGCAGTTGCAATGCGAGCAA+AGG	0.568696	4.2:+9942024	MS.gene58148:CDS
GGGAGCGTTCTTCAGCATGT+CGG	0.573337	4.2:-9941851	None:intergenic
TGTAAGTGATGCTTTCGAGT+TGG	0.586493	4.2:-9940580	None:intergenic
GGCCTCCGGCCACGTCGTCA+CGG	0.591892	4.2:+9940493	MS.gene58148:CDS
CGACGTGGCCGGAGGCCTCG+TGG	0.593417	4.2:-9940487	None:intergenic
CACCGTGACGACGTGGCCGG+AGG	0.597159	4.2:-9940495	None:intergenic
AGGCAACATGATTGAGTGTG+AGG	0.608133	4.2:+9940544	MS.gene58148:CDS
GTCACGGTGGAGCTCAAGAG+CGG	0.621698	4.2:+9940509	MS.gene58148:CDS
GGGGTGTACCACCAGTGAGG+AGG	0.633056	4.2:+9942212	MS.gene58148:CDS
GGAGGGGTGTACCACCAGTG+AGG	0.654099	4.2:+9942209	MS.gene58148:CDS
GATGATCACCTCCTCACTGG+TGG	0.658723	4.2:-9942220	None:intergenic
TGAGCTCCACCGTGACGACG+TGG	0.674804	4.2:-9940502	None:intergenic
CGTGGCCGGAGGCCTCGTGG+AGG	0.675507	4.2:-9940484	None:intergenic
AAGAGCGGCGAACTCTACAG+AGG	0.686815	4.2:+9940524	MS.gene58148:CDS
TCCGGTGAAGCTCCTCCACG+AGG	0.694574	4.2:+9940472	MS.gene58148:CDS
GGTGGTACACCCCTCCCAGG+CGG	0.697960	4.2:-9942202	None:intergenic
CTCCGGCCACGTCGTCACGG+TGG	0.732137	4.2:+9940496	MS.gene58148:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAACTAGGAATAAAAAA+AGG	-	chr4.2:9942056-9942075	None:intergenic	15.0%
!!	TAGATGAAAATAAATAAACT+AGG	-	chr4.2:9942068-9942087	None:intergenic	15.0%
!!!	TTAATCACTTTTTAATAAGA+AGG	-	chr4.2:9941910-9941929	None:intergenic	15.0%
!!	AAGAAATTAACAAGTTTCAT+AGG	-	chr4.2:9941548-9941567	None:intergenic	20.0%
!!	AATAAATTAACAGTAAGACA+TGG	+	chr4.2:9941413-9941432	MS.gene58148:intron	20.0%
!!	ATATCATTAGAGAAAAAAGT+AGG	+	chr4.2:9940844-9940863	MS.gene58148:intron	20.0%
!!	GAAAAAAAAAGTTACAAAAC+AGG	-	chr4.2:9941026-9941045	None:intergenic	20.0%
!!	GTGATTAATTACTCTATATT+TGG	+	chr4.2:9941922-9941941	MS.gene58148:intron	20.0%
!!	TATCATTAGAGAAAAAAGTA+GGG	+	chr4.2:9940845-9940864	MS.gene58148:intron	20.0%
!!!	ACAAGTAATTTTGTTAAAGA+GGG	+	chr4.2:9940910-9940929	MS.gene58148:intron	20.0%
!!!	CATGTCAATTCTTATTTATA+AGG	+	chr4.2:9941249-9941268	MS.gene58148:intron	20.0%
!!!	CTTTCTAGTATTAACTAATT+TGG	+	chr4.2:9940807-9940826	MS.gene58148:intron	20.0%
!!!	TAACGTAATTATTTCAAGTA+AGG	+	chr4.2:9941754-9941773	MS.gene58148:intron	20.0%
!!!	TACTTTTTTCTCTAATGATA+TGG	-	chr4.2:9940845-9940864	None:intergenic	20.0%
!	TAATCCATTAAGAGAGATTT+GGG	+	chr4.2:9941362-9941381	MS.gene58148:intron	25.0%
!	TCTACAATAGTTGCTAATAA+TGG	+	chr4.2:9941630-9941649	MS.gene58148:intron	25.0%
!	TTAATCCATTAAGAGAGATT+TGG	+	chr4.2:9941361-9941380	MS.gene58148:intron	25.0%
!!	AGAAAAAAGTAGGGATTTTT+GGG	+	chr4.2:9940854-9940873	MS.gene58148:intron	25.0%
!!	AGGGTTTATGTTGTATTTTA+GGG	+	chr4.2:9940751-9940770	MS.gene58148:intron	25.0%
!!	CAAAATTACTTGTGCTTTTA+TGG	-	chr4.2:9940903-9940922	None:intergenic	25.0%
!!	CACAAGTAATTTTGTTAAAG+AGG	+	chr4.2:9940909-9940928	MS.gene58148:intron	25.0%
!!	TAGGGTTTATGTTGTATTTT+AGG	+	chr4.2:9940750-9940769	MS.gene58148:intron	25.0%
!!	TATAGCTTAAAGCTTTTGAT+AGG	+	chr4.2:9941120-9941139	MS.gene58148:intron	25.0%
!!	TTTTGTCTGAATATCTTGAA+GGG	+	chr4.2:9941968-9941987	MS.gene58148:intron	25.0%
!!	TTTTTGTCTGAATATCTTGA+AGG	+	chr4.2:9941967-9941986	MS.gene58148:intron	25.0%
!!!	AAATCTCTCTTAATGGATTA+AGG	-	chr4.2:9941362-9941381	None:intergenic	25.0%
!!!	ATCAAAAGCTTTAAGCTATA+TGG	-	chr4.2:9941120-9941139	None:intergenic	25.0%
!!!	ATTTATTTTCATCTAGCCTT+GGG	+	chr4.2:9942073-9942092	MS.gene58148:intron	25.0%
!!!	TATTTATTTTCATCTAGCCT+TGG	+	chr4.2:9942072-9942091	MS.gene58148:intron	25.0%
!!!	TTACTTTTTCCAAGATGAAA+GGG	-	chr4.2:9941206-9941225	None:intergenic	25.0%
!!!	TTTACTTTTTCCAAGATGAA+AGG	-	chr4.2:9941207-9941226	None:intergenic	25.0%
!!!	TTTTTTGTAGAATTGAGTTG+TGG	+	chr4.2:9940668-9940687	MS.gene58148:intron	25.0%
	ATACTAATGTGACAGGTTTA+TGG	+	chr4.2:9941822-9941841	MS.gene58148:intron	30.0%
	TAAATCGACCCATAAAAGTT+AGG	+	chr4.2:9940939-9940958	MS.gene58148:intron	30.0%
	TAGGGATCTTTGAATACTTA+TGG	+	chr4.2:9940769-9940788	MS.gene58148:intron	30.0%
	TATCAAACTAAGCAATAAGC+TGG	-	chr4.2:9941083-9941102	None:intergenic	30.0%
	TTACACCACATTTGTAACAA+CGG	-	chr4.2:9942137-9942156	None:intergenic	30.0%
!	AAACAGAGCCTAACTTTTAT+GGG	-	chr4.2:9940950-9940969	None:intergenic	30.0%
!	AGCATTGAATTTGTAGTGTT+TGG	-	chr4.2:9941295-9941314	None:intergenic	30.0%
!	ATTGAACAAACATTTTCCCA+AGG	-	chr4.2:9942092-9942111	None:intergenic	30.0%
!	GAGAAAAAAGTAGGGATTTT+TGG	+	chr4.2:9940853-9940872	MS.gene58148:intron	30.0%
!	TGTATATCGCATTTTCTGTA+AGG	+	chr4.2:9941783-9941802	MS.gene58148:intron	30.0%
!!	TAATGGATTAAGGCTTTGTT+TGG	-	chr4.2:9941352-9941371	None:intergenic	30.0%
!!!	ATACTTATGGTTTTGAACAC+TGG	+	chr4.2:9940782-9940801	MS.gene58148:intron	30.0%
!!!	GTTACAAAACAGGTCTTTTT+TGG	-	chr4.2:9941016-9941035	None:intergenic	30.0%
!!!	TACTTTTTCCAAGATGAAAG+GGG	-	chr4.2:9941205-9941224	None:intergenic	30.0%
	ACAACCCAAATCTCTCTTAA+TGG	-	chr4.2:9941369-9941388	None:intergenic	35.0%
	AGTTTCATAGGAGAGAAAGA+TGG	-	chr4.2:9941536-9941555	None:intergenic	35.0%
	ATAATGGCTAAATCTTCTGC+AGG	+	chr4.2:9941646-9941665	MS.gene58148:intron	35.0%
	CATAAAAGTTAGGCTCTGTT+TGG	+	chr4.2:9940949-9940968	MS.gene58148:intron	35.0%
	CGTTGTGATATTCGCAAATT+TGG	+	chr4.2:9940710-9940729	MS.gene58148:intron	35.0%
	CTTGAGCATGTATTTATTCG+AGG	+	chr4.2:9941686-9941705	MS.gene58148:CDS	35.0%
	GAAAAAGTCTTTGGTTGTTG+TGG	+	chr4.2:9941472-9941491	MS.gene58148:intron	35.0%
	TGAAGTGATACTAATGTGAC+AGG	+	chr4.2:9941815-9941834	MS.gene58148:intron	35.0%
!	CAAACAGAGCCTAACTTTTA+TGG	-	chr4.2:9940951-9940970	None:intergenic	35.0%
!!	AAAAAGTAGGGATTTTTGGG+TGG	+	chr4.2:9940857-9940876	MS.gene58148:intron	35.0%
!!	TAAGAGAGATTTGGGTTGTA+TGG	+	chr4.2:9941370-9941389	MS.gene58148:intron	35.0%
!!	TTCAATGACTTGCTAGTTGA+AGG	+	chr4.2:9942106-9942125	MS.gene58148:intron	35.0%
	AAGCATCACTTACACTGCTA+AGG	+	chr4.2:9940589-9940608	MS.gene58148:CDS	40.0%
	ACCACATTTGTAACAACGGT+AGG	-	chr4.2:9942133-9942152	None:intergenic	40.0%
	ACCTACCGTTGTTACAAATG+TGG	+	chr4.2:9942129-9942148	MS.gene58148:intron	40.0%
	ACCTCAAATGTTTCCTGTGT+AGG	+	chr4.2:9942156-9942175	MS.gene58148:intron	40.0%
	ATTCGCAAATTTGGCAGATG+TGG	+	chr4.2:9940719-9940738	MS.gene58148:intron	40.0%
	CAAAGTTACCCCTTTCATCT+TGG	+	chr4.2:9941194-9941213	MS.gene58148:intron	40.0%
	CTGAATATCTTGAAGGGCAA+GGG	+	chr4.2:9941974-9941993	MS.gene58148:intron	40.0%
	GCATCTAAACGCTTGAACAT+GGG	-	chr4.2:9941874-9941893	None:intergenic	40.0%
	GCGTTTAGATGCAAGAATCA+AGG	+	chr4.2:9941882-9941901	MS.gene58148:CDS	40.0%
	TCTGAATATCTTGAAGGGCA+AGG	+	chr4.2:9941973-9941992	MS.gene58148:intron	40.0%
	TCTTGGTGGGAAAAAGTCTT+TGG	+	chr4.2:9941463-9941482	MS.gene58148:intron	40.0%
	TGATTGAGTGTGAGGATAAC+TGG	+	chr4.2:9940552-9940571	MS.gene58148:CDS	40.0%
	TGCATCTAAACGCTTGAACA+TGG	-	chr4.2:9941875-9941894	None:intergenic	40.0%
	TTATTCGAGGTAGCAAAGTC+AGG	+	chr4.2:9941699-9941718	MS.gene58148:CDS	40.0%
!	CTTTTTCCCACCAAGATAGA+CGG	-	chr4.2:9941459-9941478	None:intergenic	40.0%
!	TGTAAGTGATGCTTTCGAGT+TGG	-	chr4.2:9940583-9940602	None:intergenic	40.0%
!	TTTTTCCCACCAAGATAGAC+GGG	-	chr4.2:9941458-9941477	None:intergenic	40.0%
!!!	TAGGGATTTTTGGGTGGTTT+CGG	+	chr4.2:9940863-9940882	MS.gene58148:intron	40.0%
	AAATTTGGCAGATGTGGAGC+GGG	+	chr4.2:9940725-9940744	MS.gene58148:intron	45.0%
	AGGCAACATGATTGAGTGTG+AGG	+	chr4.2:9940544-9940563	MS.gene58148:CDS	45.0%
	CAAATTTGGCAGATGTGGAG+CGG	+	chr4.2:9940724-9940743	MS.gene58148:intron	45.0%
	GAGTCGTAGTTTGGGAATTC+CGG	+	chr4.2:9940454-9940473	MS.gene58148:CDS	45.0%
	GCCTACACAGGAAACATTTG+AGG	-	chr4.2:9942160-9942179	None:intergenic	45.0%
	TGGCTAAATCTTCTGCAGGA+TGG	+	chr4.2:9941650-9941669	MS.gene58148:intron	45.0%
	AACGATAAACCCAGCCACGA+CGG	-	chr4.2:9940694-9940713	None:intergenic	50.0%
	AGCAGTTGCAATGCGAGCAA+AGG	+	chr4.2:9942024-9942043	MS.gene58148:CDS	50.0%
	ATGTAGCCCGTCTATCTTGG+TGG	+	chr4.2:9941449-9941468	MS.gene58148:intron	50.0%
	CTGATGTAGCCCGTCTATCT+TGG	+	chr4.2:9941446-9941465	MS.gene58148:intron	50.0%
	TGTAGCCCGTCTATCTTGGT+GGG	+	chr4.2:9941450-9941469	MS.gene58148:intron	50.0%
	AAGAGCGGCGAACTCTACAG+AGG	+	chr4.2:9940524-9940543	MS.gene58148:CDS	55.0%
	GCAGATGTGGAGCGGGATTA+GGG	+	chr4.2:9940732-9940751	MS.gene58148:intron	55.0%
!	GAATTGAGTTGTGGCCGTCG+TGG	+	chr4.2:9940677-9940696	MS.gene58148:intron	55.0%
!	GGAGCGTTCTTCAGCATGTC+GGG	-	chr4.2:9941853-9941872	None:intergenic	55.0%
!!	AAGGGTGCATCGCTTGGTGT+TGG	+	chr4.2:9941992-9942011	MS.gene58148:CDS	55.0%
!!	GCATCGCTTGGTGTTGGTAG+AGG	+	chr4.2:9941998-9942017	MS.gene58148:CDS	55.0%
!!	GGGAGCGTTCTTCAGCATGT+CGG	-	chr4.2:9941854-9941873	None:intergenic	55.0%
	CCAGCAGCTTGAGCCTACAC+AGG	-	chr4.2:9942172-9942191	None:intergenic	60.0%
	CCTGTGTAGGCTCAAGCTGC+TGG	+	chr4.2:9942169-9942188	MS.gene58148:intron	60.0%
	GGCAGATGTGGAGCGGGATT+AGG	+	chr4.2:9940731-9940750	MS.gene58148:intron	60.0%
	GTCACGGTGGAGCTCAAGAG+CGG	+	chr4.2:9940509-9940528	MS.gene58148:CDS	60.0%
!	AAGGGCAAGGGTGCATCGCT+TGG	+	chr4.2:9941986-9942005	MS.gene58148:intron	60.0%
	AAGCTCCTCCACGAGGCCTC+CGG	+	chr4.2:9940479-9940498	MS.gene58148:CDS	65.0%
	ACTGGTGGTACACCCCTCCC+AGG	-	chr4.2:9942208-9942227	None:intergenic	65.0%
	GAGTTGTGGCCGTCGTGGCT+GGG	+	chr4.2:9940682-9940701	MS.gene58148:intron	65.0%
	GCCTCGTGGAGGAGCTTCAC+CGG	-	chr4.2:9940476-9940495	None:intergenic	65.0%
	GGGGTGTACCACCAGTGAGG+AGG	+	chr4.2:9942212-9942231	MS.gene58148:CDS	65.0%
	TAGGCTCAAGCTGCTGGCCG+TGG	+	chr4.2:9942175-9942194	MS.gene58148:intron	65.0%
	TCCGGTGAAGCTCCTCCACG+AGG	+	chr4.2:9940472-9940491	MS.gene58148:CDS	65.0%
	TGAGCTCCACCGTGACGACG+TGG	-	chr4.2:9940505-9940524	None:intergenic	65.0%
	TGAGTTGTGGCCGTCGTGGC+TGG	+	chr4.2:9940681-9940700	MS.gene58148:intron	65.0%
!	GGAGGGGTGTACCACCAGTG+AGG	+	chr4.2:9942209-9942228	MS.gene58148:CDS	65.0%
	CTCCACCGTGACGACGTGGC+CGG	-	chr4.2:9940501-9940520	None:intergenic	70.0%
	GGTGGTACACCCCTCCCAGG+CGG	-	chr4.2:9942205-9942224	None:intergenic	70.0%
	CACCGTGACGACGTGGCCGG+AGG	-	chr4.2:9940498-9940517	None:intergenic	75.0%
	CCCTCCCAGGCGGAGCTCCA+CGG	-	chr4.2:9942195-9942214	None:intergenic	75.0%
	CCGTGGAGCTCCGCCTGGGA+GGG	+	chr4.2:9942192-9942211	MS.gene58148:CDS	75.0%
	CGTGGAGCTCCGCCTGGGAG+GGG	+	chr4.2:9942193-9942212	MS.gene58148:CDS	75.0%
	CTCCGGCCACGTCGTCACGG+TGG	+	chr4.2:9940496-9940515	MS.gene58148:CDS	75.0%
	CTGGCCGTGGAGCTCCGCCT+GGG	+	chr4.2:9942188-9942207	MS.gene58148:CDS	75.0%
	GGCCTCCGGCCACGTCGTCA+CGG	+	chr4.2:9940493-9940512	MS.gene58148:CDS	75.0%
!	CGACGTGGCCGGAGGCCTCG+TGG	-	chr4.2:9940490-9940509	None:intergenic	80.0%
!	CGTGGCCGGAGGCCTCGTGG+AGG	-	chr4.2:9940487-9940506	None:intergenic	80.0%
!	GCCGTGGAGCTCCGCCTGGG+AGG	+	chr4.2:9942191-9942210	MS.gene58148:CDS	80.0%
!	GCTGGCCGTGGAGCTCCGCC+TGG	+	chr4.2:9942187-9942206	MS.gene58148:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	9940452	9942237	9940452	ID=MS.gene58148
chr4.2	mRNA	9940452	9942237	9940452	ID=MS.gene58148.t1;Parent=MS.gene58148
chr4.2	exon	9940452	9940610	9940452	ID=MS.gene58148.t1.exon1;Parent=MS.gene58148.t1
chr4.2	CDS	9940452	9940610	9940452	ID=cds.MS.gene58148.t1;Parent=MS.gene58148.t1
chr4.2	exon	9941668	9941720	9941668	ID=MS.gene58148.t1.exon2;Parent=MS.gene58148.t1
chr4.2	CDS	9941668	9941720	9941668	ID=cds.MS.gene58148.t1;Parent=MS.gene58148.t1
chr4.2	exon	9941837	9941903	9941837	ID=MS.gene58148.t1.exon3;Parent=MS.gene58148.t1
chr4.2	CDS	9941837	9941903	9941837	ID=cds.MS.gene58148.t1;Parent=MS.gene58148.t1
chr4.2	exon	9941989	9942045	9941989	ID=MS.gene58148.t1.exon4;Parent=MS.gene58148.t1
chr4.2	CDS	9941989	9942045	9941989	ID=cds.MS.gene58148.t1;Parent=MS.gene58148.t1
chr4.2	exon	9942178	9942237	9942178	ID=MS.gene58148.t1.exon5;Parent=MS.gene58148.t1
chr4.2	CDS	9942178	9942237	9942178	ID=cds.MS.gene58148.t1;Parent=MS.gene58148.t1

Gene Sequence

>MS.gene58148

ATGAGTCGTAGTTTGGGAATTCCGGTGAAGCTCCTCCACGAGGCCTCCGGCCACGTCGTCACGGTGGAGCTCAAGAGCGGCGAACTCTACAGAGGCAACATGATTGAGTGTGAGGATAACTGGAACTGCCAACTCGAAAGCATCACTTACACTGCTAAGGTAAGTGCTTATTTTATTTAATCACTTCTCGTTCATTCATTCATACATTTTTCACAATTTTTTGTAGAATTGAGTTGTGGCCGTCGTGGCTGGGTTTATCGTTGTGATATTCGCAAATTTGGCAGATGTGGAGCGGGATTAGGGTTTATGTTGTATTTTAGGGATCTTTGAATACTTATGGTTTTGAACACTGGATCTTTCTAGTATTAACTAATTTGGTTTGATATCATACCATATCATTAGAGAAAAAAGTAGGGATTTTTGGGTGGTTTCGGACGATGTATATGATCCATAAAAGCACAAGTAATTTTGTTAAAGAGGGTCAGATTAAATCGACCCATAAAAGTTAGGCTCTGTTTGGAAATGTCATACTCTGAGCTTATAGCTTGTAAGTTCATATGACCAAAAAAGACCTGTTTTGTAACTTTTTTTTTCTTTCTTTTTCTCACGAGCTTATAGATTATTTTTGCCAGCTTATTGCTTAGTTTGATAAGCTAGTTCAATTACCATATAGCTTAAAGCTTTTGATAGGCTAGTTCAGTTAGCATATAGCTTACAGCTTATAGCTTATCATTTTCTCTCTCAAAGTTACCCCTTTCATCTTGGAAAAAGTAAACTATTATTTAAACACATTTTATCATGTCAATTCTTATTTATAAGGTAGTTCAACTGCTAATTTTACCAAACACTACAAATTCAATGCTATAAGCTAGCTTATAAGCTATTTGCTATTTTTTGCCAAACAAAGCCTTAATCCATTAAGAGAGATTTGGGTTGTATGGTCTATTTTTAAGATATGATTAATAAATTAACAGTAAGACATGGTTTTGTTTTTCTGATGTAGCCCGTCTATCTTGGTGGGAAAAAGTCTTTGGTTGTTGTGGTTGTATGTATGCTCAAATGTGATCATTGAATTTGCAGTCCATCTTTCTCTCCTATGAAACTTGTTAATTTCTTTATGCTGTGTTTAGACTTTAGTATCTTCATTTCAAGTGTATTTTGTTAAAATTCATAGTGTATCTACAATAGTTGCTAATAATGGCTAAATCTTCTGCAGGATGGAAAAACGTCACAACTTGAGCATGTATTTATTCGAGGTAGCAAAGTCAGGTATGAATCATCATATGTTGCTCAGTTACTATATAACGTAATTATTTCAAGTAAGGTTTTATTGTATATCGCATTTTCTGTAAGGACAGTTCTCTGAAGTGATACTAATGTGACAGGTTTATGGTCATACCCGACATGCTGAAGAACGCTCCCATGTTCAAGCGTTTAGATGCAAGAATCAAGGTACCTTCTTATTAAAAAGTGATTAATTACTCTATATTTGGTCTATTTTGATTCTGTATTCATTTTTTGTCTGAATATCTTGAAGGGCAAGGGTGCATCGCTTGGTGTTGGTAGAGGCAGAGCAGTTGCAATGCGAGCAAAGGTATTTACCTTTTTTTATTCCTAGTTTATTTATTTTCATCTAGCCTTGGGAAAATGTTTGTTCAATGACTTGCTAGTTGAAGGACCTACCGTTGTTACAAATGTGGTGTAACCTCAAATGTTTCCTGTGTAGGCTCAAGCTGCTGGCCGTGGAGCTCCGCCTGGGAGGGGTGTACCACCAGTGAGGAGGTGA

Protein sequence

>MS.gene58148.t1

MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGAPPGRGVPPVRR