AlfalfaGEDB | MS.gene70292

M. sativa cultivar XinJiangDaYe / MS.gene70292

KEGG: K11088
GO: GO:0000387 GO:0005575 GO:0005681 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0022618 GO:0032991 GO:0034622 GO:0043933 GO:0065003 GO:0071826 GO:0071840 GO:1990904
PFAM: PF01423.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70292.t1	XP_003630137.1	100	131	0	0	1	131	1	131	7.00E-51	209.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70292.t1	Q9LM92	93.6	94	6	0	1	94	1	94	2.6e-46	186.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70292.t1	G7LBD3	100.0	131	0	0	1	131	1	131	5.1e-51	209.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050290	MS.gene70292	0.833109	6.44E-56	-1.69E-46
MS.gene054937	MS.gene70292	0.881547	2.19E-70	-1.69E-46
MS.gene056075	MS.gene70292	0.808678	2.75E-50	-1.69E-46
MS.gene057206	MS.gene70292	0.825389	4.81E-54	-1.69E-46
MS.gene057235	MS.gene70292	0.837584	4.77E-57	-1.69E-46
MS.gene060856	MS.gene70292	0.837869	4.03E-57	-1.69E-46
MS.gene061145	MS.gene70292	0.806489	8.02E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene007200	MS.gene70292	PPI
MS.gene70292	MS.gene062632	PPI
MS.gene70292	MS.gene067444	PPI
MS.gene35136	MS.gene70292	PPI
MS.gene48652	MS.gene70292	PPI
MS.gene56983	MS.gene70292	PPI
MS.gene067362	MS.gene70292	PPI
MS.gene04711	MS.gene70292	PPI
MS.gene70292	MS.gene85931	PPI
MS.gene036800	MS.gene70292	PPI
MS.gene50211	MS.gene70292	PPI
MS.gene043455	MS.gene70292	PPI
MS.gene068867	MS.gene70292	PPI
MS.gene70292	MS.gene023131	PPI
MS.gene92231	MS.gene70292	PPI
MS.gene028393	MS.gene70292	PPI
MS.gene069779	MS.gene70292	PPI
MS.gene59047	MS.gene70292	PPI
MS.gene035486	MS.gene70292	PPI
MS.gene002376	MS.gene70292	PPI
MS.gene95848	MS.gene70292	PPI
MS.gene040757	MS.gene70292	PPI
MS.gene59503	MS.gene70292	PPI
MS.gene022597	MS.gene70292	PPI
MS.gene070248	MS.gene70292	PPI
MS.gene035725	MS.gene70292	PPI
MS.gene06946	MS.gene70292	PPI
MS.gene029082	MS.gene70292	PPI
MS.gene009798	MS.gene70292	PPI
MS.gene83565	MS.gene70292	PPI
MS.gene056601	MS.gene70292	PPI
MS.gene83322	MS.gene70292	PPI
MS.gene028322	MS.gene70292	PPI
MS.gene045843	MS.gene70292	PPI
MS.gene055778	MS.gene70292	PPI
MS.gene70292	MS.gene073888	PPI
MS.gene038837	MS.gene70292	PPI
MS.gene70292	MS.gene053443	PPI
MS.gene047509	MS.gene70292	PPI
MS.gene70292	MS.gene01351	PPI
MS.gene012386	MS.gene70292	PPI
MS.gene90813	MS.gene70292	PPI
MS.gene62660	MS.gene70292	PPI
MS.gene015624	MS.gene70292	PPI
MS.gene060774	MS.gene70292	PPI
MS.gene82776	MS.gene70292	PPI
MS.gene006712	MS.gene70292	PPI
MS.gene93333	MS.gene70292	PPI
MS.gene70292	MS.gene67483	PPI
MS.gene61498	MS.gene70292	PPI
MS.gene86968	MS.gene70292	PPI
MS.gene073734	MS.gene70292	PPI
MS.gene046119	MS.gene70292	PPI
MS.gene53517	MS.gene70292	PPI
MS.gene013607	MS.gene70292	PPI
MS.gene70292	MS.gene018076	PPI
MS.gene97334	MS.gene70292	PPI
MS.gene64804	MS.gene70292	PPI
MS.gene028868	MS.gene70292	PPI
MS.gene058567	MS.gene70292	PPI
MS.gene70292	MS.gene070731	PPI
MS.gene065857	MS.gene70292	PPI
MS.gene36469	MS.gene70292	PPI
MS.gene065862	MS.gene70292	PPI
MS.gene043867	MS.gene70292	PPI
MS.gene24692	MS.gene70292	PPI
MS.gene053099	MS.gene70292	PPI
MS.gene31434	MS.gene70292	PPI
MS.gene70292	MS.gene065836	PPI
MS.gene045470	MS.gene70292	PPI
MS.gene35064	MS.gene70292	PPI
MS.gene62426	MS.gene70292	PPI
MS.gene065853	MS.gene70292	PPI
MS.gene70292	MS.gene28762	PPI
MS.gene06729	MS.gene70292	PPI
MS.gene032681	MS.gene70292	PPI
MS.gene050303	MS.gene70292	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70292.t1	MTR_8g092200	100.000	131	0	0	1	131	1	131	5.23e-95	270
MS.gene70292.t1	MTR_8g058537	36.111	72	45	1	7	77	2	73	1.09e-12	61.2
MS.gene70292.t1	MTR_8g058420	36.111	72	45	1	7	77	2	73	1.09e-12	61.2
MS.gene70292.t1	MTR_8g091620	36.111	72	45	1	7	77	2	73	1.41e-12	61.2
MS.gene70292.t1	MTR_7g108700	36.111	72	45	1	7	77	2	73	1.60e-12	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70292.t1	AT1G20580	84.091	132	19	2	1	131	1	131	1.09e-71	211
MS.gene70292.t1	AT1G76300	77.863	131	26	2	1	131	1	128	7.54e-69	203
MS.gene70292.t1	AT5G27720	36.111	72	45	1	7	77	2	73	2.49e-12	60.1

Find 46 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTGGCCGTGGAGCTCCGCC+TGG	0.291361	4.1:+9223585	MS.gene70292:CDS
ATACTAATGTGACAGGTTTA+TGG	0.302035	4.1:+9223220	MS.gene70292:intron
AAAGAAGATGAGTCGTAGTT+TGG	0.344374	4.1:+9221829	None:intergenic
TGATTGAGTGTGAGGATAAC+TGG	0.357866	4.1:+9221936	MS.gene70292:CDS
GAGTCGTAGTTTGGGAATTC+CGG	0.364238	4.1:+9221838	MS.gene70292:CDS
CCGTGGAGCTCCGCCTGGGA+GGG	0.368506	4.1:+9223590	MS.gene70292:CDS
CGTGGAGCTCCGCCTGGGAG+GGG	0.398677	4.1:+9223591	MS.gene70292:CDS
TAGGCTCAAGCTGCTGGCCG+TGG	0.412883	4.1:+9223573	MS.gene70292:intron
AAGAAGATGAGTCGTAGTTT+GGG	0.420399	4.1:+9221830	None:intergenic
GCCGTGGAGCTCCGCCTGGG+AGG	0.444968	4.1:+9223589	MS.gene70292:CDS
CCTGTGTAGGCTCAAGCTGC+TGG	0.451467	4.1:+9223567	MS.gene70292:intron
CTTGAGCATGTATTTATTCG+AGG	0.458500	4.1:+9223084	MS.gene70292:CDS
GCCTCGTGGAGGAGCTTCAC+CGG	0.468346	4.1:-9221857	None:intergenic
CTGGCCGTGGAGCTCCGCCT+GGG	0.468800	4.1:+9223586	MS.gene70292:CDS
TTATTCGAGGTAGCAAAGTC+AGG	0.472481	4.1:+9223097	MS.gene70292:CDS
TGCATCTAAACGCTTGAACA+TGG	0.482856	4.1:-9223270	None:intergenic
GGAGCGTTCTTCAGCATGTC+GGG	0.484052	4.1:-9223248	None:intergenic
GCATCGCTTGGTGTTGGTAG+AGG	0.487013	4.1:+9223396	MS.gene70292:CDS
AAGCTCCTCCACGAGGCCTC+CGG	0.500533	4.1:+9221863	MS.gene70292:CDS
AAGGGCAAGGGTGCATCGCT+TGG	0.512282	4.1:+9223384	MS.gene70292:intron
CCCTCCCAGGCGGAGCTCCA+CGG	0.537318	4.1:-9223590	None:intergenic
AAGGGTGCATCGCTTGGTGT+TGG	0.544000	4.1:+9223390	MS.gene70292:CDS
AAGCATCACTTACACTGCTA+AGG	0.553810	4.1:+9221973	MS.gene70292:CDS
GCGTTTAGATGCAAGAATCA+AGG	0.557683	4.1:+9223280	MS.gene70292:CDS
CTGAATATCTTGAAGGGCAA+GGG	0.558094	4.1:+9223372	MS.gene70292:intron
AATGATGATCACCTCCTCAC+TGG	0.558350	4.1:-9223621	None:intergenic
CTCCACCGTGACGACGTGGC+CGG	0.561230	4.1:-9221882	None:intergenic
GCATCTAAACGCTTGAACAT+GGG	0.565911	4.1:-9223269	None:intergenic
ACTGGTGGTACACCCCTCCC+AGG	0.566465	4.1:-9223603	None:intergenic
AGCAGTTGCAATGCGAGCAA+AGG	0.568696	4.1:+9223422	MS.gene70292:CDS
GGGAGCGTTCTTCAGCATGT+CGG	0.573337	4.1:-9223249	None:intergenic
TGTAAGTGATGCTTTCGAGT+TGG	0.586493	4.1:-9221964	None:intergenic
GGCCTCCGGCCACGTCGTCA+CGG	0.591892	4.1:+9221877	MS.gene70292:CDS
CGACGTGGCCGGAGGCCTCG+TGG	0.593417	4.1:-9221871	None:intergenic
CACCGTGACGACGTGGCCGG+AGG	0.597159	4.1:-9221879	None:intergenic
AGGCAACATGATTGAGTGTG+AGG	0.608133	4.1:+9221928	MS.gene70292:CDS
GTCACGGTGGAGCTCAAGAG+CGG	0.621698	4.1:+9221893	MS.gene70292:CDS
GGGGTGTACCACCAGTGAGG+AGG	0.633056	4.1:+9223610	MS.gene70292:CDS
GGAGGGGTGTACCACCAGTG+AGG	0.654099	4.1:+9223607	MS.gene70292:CDS
GATGATCACCTCCTCACTGG+TGG	0.658723	4.1:-9223618	None:intergenic
TGAGCTCCACCGTGACGACG+TGG	0.674804	4.1:-9221886	None:intergenic
CGTGGCCGGAGGCCTCGTGG+AGG	0.675507	4.1:-9221868	None:intergenic
AAGAGCGGCGAACTCTACAG+AGG	0.686815	4.1:+9221908	MS.gene70292:CDS
TCCGGTGAAGCTCCTCCACG+AGG	0.694574	4.1:+9221856	MS.gene70292:CDS
GGTGGTACACCCCTCCCAGG+CGG	0.697960	4.1:-9223600	None:intergenic
CTCCGGCCACGTCGTCACGG+TGG	0.732137	4.1:+9221880	MS.gene70292:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAACTAGGAATAAAAAA+AGG	-	chr4.1:9223454-9223473	None:intergenic	15.0%
!!	TAGATGAAAATAAATAAACT+AGG	-	chr4.1:9223466-9223485	None:intergenic	15.0%
!!!	TTAATCACTTTTTAATAAGA+AGG	-	chr4.1:9223308-9223327	None:intergenic	15.0%
!!	AAGAAATTAACAAGTTTCAT+AGG	-	chr4.1:9222946-9222965	None:intergenic	20.0%
!!	AATAAATTAACAGTAAGACA+TGG	+	chr4.1:9222811-9222830	MS.gene70292:intron	20.0%
!!	ATATCATTAGAGAAAAAAGT+AGG	+	chr4.1:9222228-9222247	MS.gene70292:intron	20.0%
!!	GAAAAAAAAAGTTACAAAAC+AGG	-	chr4.1:9222410-9222429	None:intergenic	20.0%
!!	GTGATTAATTACTCTATATT+TGG	+	chr4.1:9223320-9223339	MS.gene70292:intron	20.0%
!!	TATCATTAGAGAAAAAAGTA+GGG	+	chr4.1:9222229-9222248	MS.gene70292:intron	20.0%
!!!	ACAAGTAATTTTGTTAAAGA+GGG	+	chr4.1:9222294-9222313	MS.gene70292:intron	20.0%
!!!	CATGTCAATTCTTATTTATA+AGG	+	chr4.1:9222633-9222652	MS.gene70292:intron	20.0%
!!!	CTTTCTAGTATTAACTAATT+TGG	+	chr4.1:9222191-9222210	MS.gene70292:intron	20.0%
!!!	TAACGTAATTATTTCAAGTA+AGG	+	chr4.1:9223152-9223171	MS.gene70292:intron	20.0%
!!!	TACTTTTTTCTCTAATGATA+TGG	-	chr4.1:9222229-9222248	None:intergenic	20.0%
!	TAATCCATTAAGAGAGATTT+GGG	+	chr4.1:9222760-9222779	MS.gene70292:intron	25.0%
!	TATCAAACTAAGAAATAAGC+TGG	-	chr4.1:9222467-9222486	None:intergenic	25.0%
!	TCTACAATAGTTGCTAATAA+TGG	+	chr4.1:9223028-9223047	MS.gene70292:intron	25.0%
!	TTAATCCATTAAGAGAGATT+TGG	+	chr4.1:9222759-9222778	MS.gene70292:intron	25.0%
!!	AGAAAAAAGTAGGGATTTTT+GGG	+	chr4.1:9222238-9222257	MS.gene70292:intron	25.0%
!!	AGGGTTTATGTTGTATTTTA+GGG	+	chr4.1:9222135-9222154	MS.gene70292:intron	25.0%
!!	CAAAATTACTTGTGCTTTTA+TGG	-	chr4.1:9222287-9222306	None:intergenic	25.0%
!!	CACAAGTAATTTTGTTAAAG+AGG	+	chr4.1:9222293-9222312	MS.gene70292:intron	25.0%
!!	TAGGGTTTATGTTGTATTTT+AGG	+	chr4.1:9222134-9222153	MS.gene70292:intron	25.0%
!!	TATAGCTTAAAGCTTTTGAT+AGG	+	chr4.1:9222504-9222523	MS.gene70292:intron	25.0%
!!	TTTTGTCTGAATATCTTGAA+GGG	+	chr4.1:9223366-9223385	MS.gene70292:intron	25.0%
!!	TTTTTGTCTGAATATCTTGA+AGG	+	chr4.1:9223365-9223384	MS.gene70292:intron	25.0%
!!!	AAATCTCTCTTAATGGATTA+AGG	-	chr4.1:9222760-9222779	None:intergenic	25.0%
!!!	ATCAAAAGCTTTAAGCTATA+TGG	-	chr4.1:9222504-9222523	None:intergenic	25.0%
!!!	ATTTATTTTCATCTAGCCTT+GGG	+	chr4.1:9223471-9223490	MS.gene70292:intron	25.0%
!!!	GTTACAAAACAGGTATTTTT+TGG	-	chr4.1:9222400-9222419	None:intergenic	25.0%
!!!	TATTTATTTTCATCTAGCCT+TGG	+	chr4.1:9223470-9223489	MS.gene70292:intron	25.0%
!!!	TTACTTTTTCCAAGATGAAA+GGG	-	chr4.1:9222590-9222609	None:intergenic	25.0%
!!!	TTTACTTTTTCCAAGATGAA+AGG	-	chr4.1:9222591-9222610	None:intergenic	25.0%
!!!	TTTTTTGTAGAATTGAGTTG+TGG	+	chr4.1:9222052-9222071	MS.gene70292:intron	25.0%
	ATACTAATGTGACAGGTTTA+TGG	+	chr4.1:9223220-9223239	MS.gene70292:intron	30.0%
	TAAATCGACCCATAAAAGTT+AGG	+	chr4.1:9222323-9222342	MS.gene70292:intron	30.0%
	TAGGGATCTTTGAATACTTA+TGG	+	chr4.1:9222153-9222172	MS.gene70292:intron	30.0%
	TGGATTGAATTTGTAGTGTT+TGG	-	chr4.1:9222679-9222698	None:intergenic	30.0%
	TTACACCACATTTGTAACAA+CGG	-	chr4.1:9223535-9223554	None:intergenic	30.0%
!	AAACAGAGCCTAACTTTTAT+GGG	-	chr4.1:9222334-9222353	None:intergenic	30.0%
!	ATTGAACAAACATTTTCCCA+AGG	-	chr4.1:9223490-9223509	None:intergenic	30.0%
!	GAGAAAAAAGTAGGGATTTT+TGG	+	chr4.1:9222237-9222256	MS.gene70292:intron	30.0%
!	TGTATATCGCATTTTCTGTA+AGG	+	chr4.1:9223181-9223200	MS.gene70292:intron	30.0%
!!	TAATGGATTAAGGCTTTGTT+TGG	-	chr4.1:9222750-9222769	None:intergenic	30.0%
!!!	ATACTTATGGTTTTGAACAC+TGG	+	chr4.1:9222166-9222185	MS.gene70292:intron	30.0%
!!!	TACTTTTTCCAAGATGAAAG+GGG	-	chr4.1:9222589-9222608	None:intergenic	30.0%
	ACAACCCAAATCTCTCTTAA+TGG	-	chr4.1:9222767-9222786	None:intergenic	35.0%
	AGTTTCATAGGAGAGAAAGA+TGG	-	chr4.1:9222934-9222953	None:intergenic	35.0%
	ATAATGGCTAAATCTTCTGC+AGG	+	chr4.1:9223044-9223063	MS.gene70292:intron	35.0%
	CATAAAAGTTAGGCTCTGTT+TGG	+	chr4.1:9222333-9222352	MS.gene70292:intron	35.0%
	CGTTGTGATATTCGCAAATT+TGG	+	chr4.1:9222094-9222113	MS.gene70292:intron	35.0%
	CTTGAGCATGTATTTATTCG+AGG	+	chr4.1:9223084-9223103	MS.gene70292:CDS	35.0%
	GAAAAAGTCTTTGGTTGTTG+TGG	+	chr4.1:9222870-9222889	MS.gene70292:intron	35.0%
	TGAAGTGATACTAATGTGAC+AGG	+	chr4.1:9223213-9223232	MS.gene70292:intron	35.0%
!	CAAACAGAGCCTAACTTTTA+TGG	-	chr4.1:9222335-9222354	None:intergenic	35.0%
!!	AAAAAGTAGGGATTTTTGGG+TGG	+	chr4.1:9222241-9222260	MS.gene70292:intron	35.0%
!!	TAAGAGAGATTTGGGTTGTA+TGG	+	chr4.1:9222768-9222787	MS.gene70292:intron	35.0%
!!	TTCAATGACTTGCTAGTTGA+AGG	+	chr4.1:9223504-9223523	MS.gene70292:intron	35.0%
	AAATTTGGCAGATGTGTAGC+GGG	+	chr4.1:9222109-9222128	MS.gene70292:intron	40.0%
	AAGCATCACTTACACTGCTA+AGG	+	chr4.1:9221973-9221992	MS.gene70292:CDS	40.0%
	ACCACATTTGTAACAACGGT+AGG	-	chr4.1:9223531-9223550	None:intergenic	40.0%
	ACCTACCGTTGTTACAAATG+TGG	+	chr4.1:9223527-9223546	MS.gene70292:intron	40.0%
	ACCTCAAATGTTTCCTGTGT+AGG	+	chr4.1:9223554-9223573	MS.gene70292:intron	40.0%
	CAAAGTTACCCCTTTCATCT+TGG	+	chr4.1:9222578-9222597	MS.gene70292:intron	40.0%
	CAAATTTGGCAGATGTGTAG+CGG	+	chr4.1:9222108-9222127	MS.gene70292:intron	40.0%
	CTAGCTTATAGCAGATAAGC+TGG	-	chr4.1:9222702-9222721	None:intergenic	40.0%
	CTGAATATCTTGAAGGGCAA+GGG	+	chr4.1:9223372-9223391	MS.gene70292:intron	40.0%
	GCATCTAAACGCTTGAACAT+GGG	-	chr4.1:9223272-9223291	None:intergenic	40.0%
	GCGTTTAGATGCAAGAATCA+AGG	+	chr4.1:9223280-9223299	MS.gene70292:CDS	40.0%
	TCTGAATATCTTGAAGGGCA+AGG	+	chr4.1:9223371-9223390	MS.gene70292:intron	40.0%
	TCTTGGTGGGAAAAAGTCTT+TGG	+	chr4.1:9222861-9222880	MS.gene70292:intron	40.0%
	TGATTGAGTGTGAGGATAAC+TGG	+	chr4.1:9221936-9221955	MS.gene70292:CDS	40.0%
	TGCATCTAAACGCTTGAACA+TGG	-	chr4.1:9223273-9223292	None:intergenic	40.0%
	TTATTCGAGGTAGCAAAGTC+AGG	+	chr4.1:9223097-9223116	MS.gene70292:CDS	40.0%
!	CTTTTTCCCACCAAGATAGA+CGG	-	chr4.1:9222857-9222876	None:intergenic	40.0%
!	TGTAAGTGATGCTTTCGAGT+TGG	-	chr4.1:9221967-9221986	None:intergenic	40.0%
!	TTTTTCCCACCAAGATAGAC+GGG	-	chr4.1:9222856-9222875	None:intergenic	40.0%
!!!	TAGGGATTTTTGGGTGGTTT+CGG	+	chr4.1:9222247-9222266	MS.gene70292:intron	40.0%
	AGGCAACATGATTGAGTGTG+AGG	+	chr4.1:9221928-9221947	MS.gene70292:CDS	45.0%
	GAGTCGTAGTTTGGGAATTC+CGG	+	chr4.1:9221838-9221857	MS.gene70292:CDS	45.0%
	GCCTACACAGGAAACATTTG+AGG	-	chr4.1:9223558-9223577	None:intergenic	45.0%
	GCTTATAGCAGATAAGCTGG+TGG	-	chr4.1:9222699-9222718	None:intergenic	45.0%
	TGGCTAAATCTTCTGCAGGA+TGG	+	chr4.1:9223048-9223067	MS.gene70292:intron	45.0%
	AACGATAAACCCAGCCACGA+CGG	-	chr4.1:9222078-9222097	None:intergenic	50.0%
	AGCAGTTGCAATGCGAGCAA+AGG	+	chr4.1:9223422-9223441	MS.gene70292:CDS	50.0%
	ATGTAGCCCGTCTATCTTGG+TGG	+	chr4.1:9222847-9222866	MS.gene70292:intron	50.0%
	CTGATGTAGCCCGTCTATCT+TGG	+	chr4.1:9222844-9222863	MS.gene70292:intron	50.0%
	TGTAGCCCGTCTATCTTGGT+GGG	+	chr4.1:9222848-9222867	MS.gene70292:intron	50.0%
!	GCAGATGTGTAGCGGGATTA+GGG	+	chr4.1:9222116-9222135	MS.gene70292:intron	50.0%
	AAGAGCGGCGAACTCTACAG+AGG	+	chr4.1:9221908-9221927	MS.gene70292:CDS	55.0%
!	GAATTGAGTTGTGGCCGTCG+TGG	+	chr4.1:9222061-9222080	MS.gene70292:intron	55.0%
!	GGAGCGTTCTTCAGCATGTC+GGG	-	chr4.1:9223251-9223270	None:intergenic	55.0%
!	GGCAGATGTGTAGCGGGATT+AGG	+	chr4.1:9222115-9222134	MS.gene70292:intron	55.0%
!!	AAGGGTGCATCGCTTGGTGT+TGG	+	chr4.1:9223390-9223409	MS.gene70292:CDS	55.0%
!!	GCATCGCTTGGTGTTGGTAG+AGG	+	chr4.1:9223396-9223415	MS.gene70292:CDS	55.0%
!!	GGGAGCGTTCTTCAGCATGT+CGG	-	chr4.1:9223252-9223271	None:intergenic	55.0%
	CCAGCAGCTTGAGCCTACAC+AGG	-	chr4.1:9223570-9223589	None:intergenic	60.0%
	CCTGTGTAGGCTCAAGCTGC+TGG	+	chr4.1:9223567-9223586	MS.gene70292:intron	60.0%
	GTCACGGTGGAGCTCAAGAG+CGG	+	chr4.1:9221893-9221912	MS.gene70292:CDS	60.0%
!	AAGGGCAAGGGTGCATCGCT+TGG	+	chr4.1:9223384-9223403	MS.gene70292:intron	60.0%
	AAGCTCCTCCACGAGGCCTC+CGG	+	chr4.1:9221863-9221882	MS.gene70292:CDS	65.0%
	ACTGGTGGTACACCCCTCCC+AGG	-	chr4.1:9223606-9223625	None:intergenic	65.0%
	GAGTTGTGGCCGTCGTGGCT+GGG	+	chr4.1:9222066-9222085	MS.gene70292:intron	65.0%
	GCCTCGTGGAGGAGCTTCAC+CGG	-	chr4.1:9221860-9221879	None:intergenic	65.0%
	GGGGTGTACCACCAGTGAGG+AGG	+	chr4.1:9223610-9223629	MS.gene70292:CDS	65.0%
	TAGGCTCAAGCTGCTGGCCG+TGG	+	chr4.1:9223573-9223592	MS.gene70292:intron	65.0%
	TCCGGTGAAGCTCCTCCACG+AGG	+	chr4.1:9221856-9221875	MS.gene70292:CDS	65.0%
	TGAGCTCCACCGTGACGACG+TGG	-	chr4.1:9221889-9221908	None:intergenic	65.0%
	TGAGTTGTGGCCGTCGTGGC+TGG	+	chr4.1:9222065-9222084	MS.gene70292:intron	65.0%
!	GGAGGGGTGTACCACCAGTG+AGG	+	chr4.1:9223607-9223626	MS.gene70292:CDS	65.0%
	CTCCACCGTGACGACGTGGC+CGG	-	chr4.1:9221885-9221904	None:intergenic	70.0%
	GGTGGTACACCCCTCCCAGG+CGG	-	chr4.1:9223603-9223622	None:intergenic	70.0%
	CACCGTGACGACGTGGCCGG+AGG	-	chr4.1:9221882-9221901	None:intergenic	75.0%
	CCCTCCCAGGCGGAGCTCCA+CGG	-	chr4.1:9223593-9223612	None:intergenic	75.0%
	CCGTGGAGCTCCGCCTGGGA+GGG	+	chr4.1:9223590-9223609	MS.gene70292:CDS	75.0%
	CGTGGAGCTCCGCCTGGGAG+GGG	+	chr4.1:9223591-9223610	MS.gene70292:CDS	75.0%
	CTCCGGCCACGTCGTCACGG+TGG	+	chr4.1:9221880-9221899	MS.gene70292:CDS	75.0%
	CTGGCCGTGGAGCTCCGCCT+GGG	+	chr4.1:9223586-9223605	MS.gene70292:CDS	75.0%
	GGCCTCCGGCCACGTCGTCA+CGG	+	chr4.1:9221877-9221896	MS.gene70292:CDS	75.0%
!	CGACGTGGCCGGAGGCCTCG+TGG	-	chr4.1:9221874-9221893	None:intergenic	80.0%
!	CGTGGCCGGAGGCCTCGTGG+AGG	-	chr4.1:9221871-9221890	None:intergenic	80.0%
!	GCCGTGGAGCTCCGCCTGGG+AGG	+	chr4.1:9223589-9223608	MS.gene70292:CDS	80.0%
!	GCTGGCCGTGGAGCTCCGCC+TGG	+	chr4.1:9223585-9223604	MS.gene70292:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	9221836	9223635	9221836	ID=MS.gene70292
chr4.1	mRNA	9221836	9223635	9221836	ID=MS.gene70292.t1;Parent=MS.gene70292
chr4.1	exon	9221836	9221994	9221836	ID=MS.gene70292.t1.exon1;Parent=MS.gene70292.t1
chr4.1	CDS	9221836	9221994	9221836	ID=cds.MS.gene70292.t1;Parent=MS.gene70292.t1
chr4.1	exon	9223066	9223118	9223066	ID=MS.gene70292.t1.exon2;Parent=MS.gene70292.t1
chr4.1	CDS	9223066	9223118	9223066	ID=cds.MS.gene70292.t1;Parent=MS.gene70292.t1
chr4.1	exon	9223235	9223301	9223235	ID=MS.gene70292.t1.exon3;Parent=MS.gene70292.t1
chr4.1	CDS	9223235	9223301	9223235	ID=cds.MS.gene70292.t1;Parent=MS.gene70292.t1
chr4.1	exon	9223387	9223443	9223387	ID=MS.gene70292.t1.exon4;Parent=MS.gene70292.t1
chr4.1	CDS	9223387	9223443	9223387	ID=cds.MS.gene70292.t1;Parent=MS.gene70292.t1
chr4.1	exon	9223576	9223635	9223576	ID=MS.gene70292.t1.exon5;Parent=MS.gene70292.t1
chr4.1	CDS	9223576	9223635	9223576	ID=cds.MS.gene70292.t1;Parent=MS.gene70292.t1

Gene Sequence

>MS.gene70292

ATGAGTCGTAGTTTGGGAATTCCGGTGAAGCTCCTCCACGAGGCCTCCGGCCACGTCGTCACGGTGGAGCTCAAGAGCGGCGAACTCTACAGAGGCAACATGATTGAGTGTGAGGATAACTGGAACTGCCAACTCGAAAGCATCACTTACACTGCTAAGGTAAGTGCTTATTTTATTTAATCACTTCTCGTTCATTCATTCATACATTTTTCACAATTTTTTGTAGAATTGAGTTGTGGCCGTCGTGGCTGGGTTTATCGTTGTGATATTCGCAAATTTGGCAGATGTGTAGCGGGATTAGGGTTTATGTTGTATTTTAGGGATCTTTGAATACTTATGGTTTTGAACACTGGATCTTTCTAGTATTAACTAATTTGGTTTGATATCATACCATATCATTAGAGAAAAAAGTAGGGATTTTTGGGTGGTTTCGGACGATGTATATGATCCATAAAAGCACAAGTAATTTTGTTAAAGAGGGTCAGATTAAATCGACCCATAAAAGTTAGGCTCTGTTTGGAAATGTCATACTCTGAGCTTATAGCTTGTAAGTTCATATGACCAAAAAATACCTGTTTTGTAACTTTTTTTTTCTTTCTTTTTCTCACGAGCTTATAGATTATTTTTGCCAGCTTATTTCTTAGTTTGATAAGCTAGTTCAATTACCATATAGCTTAAAGCTTTTGATAGGCTAGTTCAGTTAGCATATAGCTTACAACTTATAGCTTATCATTTTCTCTCTCAAAGTTACCCCTTTCATCTTGGAAAAAGTAAACTATTATTTAAACACATTTTATCATGTCAATTCTTATTTATAAGGTAGTTCAACTGCTAATTTTACCAAACACTACAAATTCAATCCACCAGCTTATCTGCTATAAGCTAGCTTATAAGCTATTTGCTATTTTTTGCCAAACAAAGCCTTAATCCATTAAGAGAGATTTGGGTTGTATGGTCTATTTTTAAGATATGATTAATAAATTAACAGTAAGACATGGTTTTGTTTTTCTGATGTAGCCCGTCTATCTTGGTGGGAAAAAGTCTTTGGTTGTTGTGGTTGTATGTATGCTCAAATGTGATCATTGAATTTGCAGTCCATCTTTCTCTCCTATGAAACTTGTTAATTTCTTTATGCTGTGTTTAGACTTTAGTATCTTCATTTCAAGTGTATTTTGTTAAAATTCATAGTGTATCTACAATAGTTGCTAATAATGGCTAAATCTTCTGCAGGATGGAAAAACGTCACAACTTGAGCATGTATTTATTCGAGGTAGCAAAGTCAGGTATGAATCATCATATGTTGCTCAGTTACTATATAACGTAATTATTTCAAGTAAGGTTTTATTGTATATCGCATTTTCTGTAAGGACAGTTCTCTGAAGTGATACTAATGTGACAGGTTTATGGTCATACCCGACATGCTGAAGAACGCTCCCATGTTCAAGCGTTTAGATGCAAGAATCAAGGTACCTTCTTATTAAAAAGTGATTAATTACTCTATATTTGGTCTATTTTGATTCTGTATTCATTTTTTGTCTGAATATCTTGAAGGGCAAGGGTGCATCGCTTGGTGTTGGTAGAGGCAGAGCAGTTGCAATGCGAGCAAAGGTATTTACCTTTTTTTATTCCTAGTTTATTTATTTTCATCTAGCCTTGGGAAAATGTTTGTTCAATGACTTGCTAGTTGAAGGACCTACCGTTGTTACAAATGTGGTGTAACCTCAAATGTTTCCTGTGTAGGCTCAAGCTGCTGGCCGTGGAGCTCCGCCTGGGAGGGGTGTACCACCAGTGAGGAGGTGA

Protein sequence

>MS.gene70292.t1

MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGAPPGRGVPPVRR