AlfalfaGEDB | MS.gene062632

M. sativa cultivar XinJiangDaYe / MS.gene062632

KEGG: K11099
GO: GO:0000387 GO:0005575 GO:0005681 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0022618 GO:0032991 GO:0034622 GO:0043933 GO:0065003 GO:0071826 GO:0071840 GO:1990904
PFAM: PF01423.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062632.t1	XP_024641255.1	100	81	0	0	1	81	1	81	8.80E-36	159.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062632.t1	P24715	95.1	81	4	0	1	81	1	81	1.7e-35	149.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062632.t1	A0A396HK16	100.0	81	0	0	1	81	1	81	6.4e-36	159.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene060429	MS.gene062632	0.805725	1.16E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene028322	MS.gene062632	PPI
MS.gene70292	MS.gene062632	PPI
MS.gene58148	MS.gene062632	PPI
MS.gene68906	MS.gene062632	PPI
MS.gene069779	MS.gene062632	PPI
MS.gene011973	MS.gene062632	PPI
MS.gene062632	MS.gene85931	PPI
MS.gene035486	MS.gene062632	PPI
MS.gene040757	MS.gene062632	PPI
MS.gene90813	MS.gene062632	PPI
MS.gene064051	MS.gene062632	PPI
MS.gene62660	MS.gene062632	PPI
MS.gene015624	MS.gene062632	PPI
MS.gene024669	MS.gene062632	PPI
MS.gene047872	MS.gene062632	PPI
MS.gene060774	MS.gene062632	PPI
MS.gene029082	MS.gene062632	PPI
MS.gene75072	MS.gene062632	PPI
MS.gene93333	MS.gene062632	PPI
MS.gene83565	MS.gene062632	PPI
MS.gene073734	MS.gene062632	PPI
MS.gene030285	MS.gene062632	PPI
MS.gene046119	MS.gene062632	PPI
MS.gene53517	MS.gene062632	PPI
MS.gene013607	MS.gene062632	PPI
MS.gene97334	MS.gene062632	PPI
MS.gene82776	MS.gene062632	PPI
MS.gene64804	MS.gene062632	PPI
MS.gene058567	MS.gene062632	PPI
MS.gene065862	MS.gene062632	PPI
MS.gene070731	MS.gene062632	PPI
MS.gene062632	MS.gene073888	PPI
MS.gene24692	MS.gene062632	PPI
MS.gene053099	MS.gene062632	PPI
MS.gene018076	MS.gene062632	PPI
MS.gene56983	MS.gene062632	PPI
MS.gene28172	MS.gene062632	PPI
MS.gene35064	MS.gene062632	PPI
MS.gene062632	MS.gene053443	PPI
MS.gene065853	MS.gene062632	PPI
MS.gene86968	MS.gene062632	PPI
MS.gene072740	MS.gene062632	PPI
MS.gene050303	MS.gene062632	PPI
MS.gene062632	MS.gene67483	PPI
MS.gene35136	MS.gene062632	PPI
MS.gene48652	MS.gene062632	PPI
MS.gene004548	MS.gene062632	PPI
MS.gene065857	MS.gene062632	PPI
MS.gene66329	MS.gene062632	PPI
MS.gene36469	MS.gene062632	PPI
MS.gene062632	MS.gene065836	PPI
MS.gene007200	MS.gene062632	PPI
MS.gene043867	MS.gene062632	PPI
MS.gene04711	MS.gene062632	PPI
MS.gene52398	MS.gene062632	PPI
MS.gene06729	MS.gene062632	PPI
MS.gene92231	MS.gene062632	PPI
MS.gene032681	MS.gene062632	PPI
MS.gene028393	MS.gene062632	PPI
MS.gene023131	MS.gene062632	PPI
MS.gene21651	MS.gene062632	PPI
MS.gene95848	MS.gene062632	PPI
MS.gene030697	MS.gene062632	PPI
MS.gene062632	MS.gene28762	PPI
MS.gene59503	MS.gene062632	PPI
MS.gene06946	MS.gene062632	PPI
MS.gene22321	MS.gene062632	PPI
MS.gene009798	MS.gene062632	PPI
MS.gene66321	MS.gene062632	PPI
MS.gene00289	MS.gene062632	PPI
MS.gene062632	MS.gene067444	PPI
MS.gene50211	MS.gene062632	PPI
MS.gene83322	MS.gene062632	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062632.t1	MTR_7g104930	100.000	76	0	0	1	76	1	76	1.93e-50	153
MS.gene062632.t1	MTR_6g066250	91.176	68	6	0	14	81	15	82	1.68e-38	123
MS.gene062632.t1	MTR_7g065100	37.500	72	36	1	9	71	10	81	1.24e-12	58.2
MS.gene062632.t1	MTR_8g036205	32.099	81	46	1	9	80	10	90	3.92e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062632.t1	AT2G23930	92.105	76	6	0	1	76	1	76	1.28e-47	146
MS.gene062632.t1	AT3G11500	92.105	76	6	0	1	76	1	76	1.51e-47	145
MS.gene062632.t1	AT3G11500	92.105	76	6	0	1	76	1	76	1.51e-47	145
MS.gene062632.t1	AT2G23930	90.000	50	5	0	27	76	1	50	7.24e-27	93.2
MS.gene062632.t1	AT2G03870	38.028	71	35	1	9	70	10	80	2.33e-12	57.4
MS.gene062632.t1	AT2G03870	38.028	71	35	1	9	70	10	80	2.33e-12	57.4

Find 16 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTCGACCAGTTTATGAATT+TGG	0.234210	6.4:+46926705	MS.gene062632:CDS
GTTTCTTACTTCTTCAAATC+TGG	0.300729	6.4:-46923990	None:intergenic
CAACAACCAAATTCATAAAC+TGG	0.396579	6.4:-46926711	None:intergenic
CATCTCACCATGAGCAGATC+AGG	0.435673	6.4:+46923960	None:intergenic
CACTTGAACCAGTAGTGAAC+AGG	0.448668	6.4:+46926922	MS.gene062632:CDS
GACAATACTGTGGAGGTAAA+CGG	0.449794	6.4:+46926733	MS.gene062632:CDS
CATCCGATCCTGTTCACTAC+TGG	0.472255	6.4:-46926930	None:intergenic
AATGCAAATCGCATGATTGT+TGG	0.496789	6.4:+46926670	MS.gene062632:CDS
TCTTACTTCTTCAAATCTGG+TGG	0.521770	6.4:-46923987	None:intergenic
TGGTTGTCCTGATCTGCTCA+TGG	0.532104	6.4:-46923967	None:intergenic
TCATAAACTGGTCGAAGCCA+CGG	0.561151	6.4:-46926699	None:intergenic
ATGATTGTTGGCACTCTCCG+TGG	0.606920	6.4:+46926682	MS.gene062632:CDS
AAATAGTGTTGTCACTGTAG+AGG	0.626056	6.4:+46926899	MS.gene062632:CDS
GAACCAGTAGTGAACAGGAT+CGG	0.644425	6.4:+46926927	MS.gene062632:CDS
TTTGGTTGTTGACAATACTG+TGG	0.664176	6.4:+46926723	MS.gene062632:CDS
GGTTGTTGACAATACTGTGG+AGG	0.670066	6.4:+46926726	MS.gene062632:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATAATTATATACTTTAG+GGG	+	chr6.4:46925028-46925047	MS.gene062632:intron	10.0%
!!!	ACTTTTTTTTTTTAACTTTA+TGG	+	chr6.4:46926130-46926149	MS.gene062632:intron	10.0%
!!!	CTTTTTTCTAATTTAATTTT+GGG	+	chr6.4:46926382-46926401	MS.gene062632:intron	10.0%
!!!	TACTATTTTACATAAATTTA+GGG	+	chr6.4:46925847-46925866	MS.gene062632:intron	10.0%
!!!	TCTTTTTTCTAATTTAATTT+TGG	+	chr6.4:46926381-46926400	MS.gene062632:intron	10.0%
!!!	TTTTTTTGTTTTAATTTTAC+AGG	+	chr6.4:46924112-46924131	MS.gene062632:intron	10.0%
!!	AACTATTAAAATCTACTAAA+AGG	-	chr6.4:46926234-46926253	None:intergenic	15.0%
!!	AAGAAAAGAAAAAAAGAATT+AGG	-	chr6.4:46924174-46924193	None:intergenic	15.0%
!!	ATTATTAACTCTAATATTAG+CGG	+	chr6.4:46926810-46926829	MS.gene062632:intron	15.0%
!!!	GTACTATTTTACATAAATTT+AGG	+	chr6.4:46925846-46925865	MS.gene062632:intron	15.0%
!!!	TAGTAGATTTTAATAGTTTA+GGG	+	chr6.4:46926236-46926255	MS.gene062632:intron	15.0%
!!!	TATTATTAATAAGCTTGTTA+AGG	+	chr6.4:46924629-46924648	MS.gene062632:intron	15.0%
!!!	TTAGTAGATTTTAATAGTTT+AGG	+	chr6.4:46926235-46926254	MS.gene062632:intron	15.0%
!!	AAAAACTAATCTAATCCAAA+CGG	+	chr6.4:46924761-46924780	MS.gene062632:intron	20.0%
!!	AAAGGAAATGAAGTTTAAAA+AGG	-	chr6.4:46925527-46925546	None:intergenic	20.0%
!!	AAGAATAAACCATCAATTTA+GGG	+	chr6.4:46924253-46924272	MS.gene062632:intron	20.0%
!!	AATTGAGGAATTTAACAATA+AGG	+	chr6.4:46926088-46926107	MS.gene062632:intron	20.0%
!!	TAATAATAATGCAGAATATG+AGG	-	chr6.4:46926797-46926816	None:intergenic	20.0%
!!	TTAAGGTAGTTATGAAAAAA+TGG	+	chr6.4:46924646-46924665	MS.gene062632:intron	20.0%
!!	TTTCCTATAGTATAAGATTA+GGG	+	chr6.4:46925065-46925084	MS.gene062632:intron	20.0%
!!!	ACTTCTTTTTTTAACGTTAT+TGG	+	chr6.4:46925329-46925348	MS.gene062632:intron	20.0%
!!!	AGAATTGATTCTAACAAATT+TGG	-	chr6.4:46924533-46924552	None:intergenic	20.0%
!!!	ATATTTGCAATTCTAAAGAA+TGG	-	chr6.4:46925715-46925734	None:intergenic	20.0%
!!!	ATTGATAGTTTAAAAGACTA+AGG	-	chr6.4:46924789-46924808	None:intergenic	20.0%
!!!	TTGATAGTTTAAAAGACTAA+GGG	-	chr6.4:46924788-46924807	None:intergenic	20.0%
!	AAAAATAAGACAATCCAAAC+AGG	-	chr6.4:46924279-46924298	None:intergenic	25.0%
!	AAAACTAATCTAATCCAAAC+GGG	+	chr6.4:46924762-46924781	MS.gene062632:intron	25.0%
!	ACCAATAATGTTCAAAAACA+TGG	+	chr6.4:46925823-46925842	MS.gene062632:intron	25.0%
!	AGCATAGTAGAAAATAAAAC+AGG	-	chr6.4:46924980-46924999	None:intergenic	25.0%
!	ATGAATCTCAAACTAAACAT+AGG	-	chr6.4:46925383-46925402	None:intergenic	25.0%
!	ATTCATATTCATAGCTCAAT+AGG	+	chr6.4:46926347-46926366	MS.gene062632:intron	25.0%
!	CCAATAATGTTCAAAAACAT+GGG	+	chr6.4:46925824-46925843	MS.gene062632:intron	25.0%
!	CTCTAACATCTTAATAACAT+AGG	-	chr6.4:46924887-46924906	None:intergenic	25.0%
!	CTTTCCTATAGTATAAGATT+AGG	+	chr6.4:46925064-46925083	MS.gene062632:intron	25.0%
!	GAAAATAAAACAGGAATGAA+AGG	-	chr6.4:46924971-46924990	None:intergenic	25.0%
!	GAAGAATAAACCATCAATTT+AGG	+	chr6.4:46924252-46924271	MS.gene062632:intron	25.0%
!	TAGAATGGCAAAAATATACT+TGG	+	chr6.4:46925903-46925922	MS.gene062632:intron	25.0%
!	TAGTTGCATAAGTGTATATT+TGG	-	chr6.4:46924595-46924614	None:intergenic	25.0%
!	TATCTCAATTCTCAGTAATA+TGG	-	chr6.4:46926524-46926543	None:intergenic	25.0%
!	TCCAAGAACGTTAAAAATTA+GGG	+	chr6.4:46925588-46925607	MS.gene062632:intron	25.0%
!	TGATGTACTTTCATAGTTTA+GGG	+	chr6.4:46926160-46926179	MS.gene062632:intron	25.0%
!	TTCATATTCATAGCTCAATA+GGG	+	chr6.4:46926348-46926367	MS.gene062632:intron	25.0%
!	TTGAGACTAAATTAAAGAGA+GGG	+	chr6.4:46925111-46925130	MS.gene062632:intron	25.0%
!	TTGATCAATAATGAACACAA+GGG	+	chr6.4:46926560-46926579	MS.gene062632:intron	25.0%
!	TTGATGTACTTTCATAGTTT+AGG	+	chr6.4:46926159-46926178	MS.gene062632:intron	25.0%
!!	TTTGAGACTAAATTAAAGAG+AGG	+	chr6.4:46925110-46925129	MS.gene062632:intron	25.0%
!!!	AATTTAATTTTGGGATGCAT+CGG	+	chr6.4:46926391-46926410	MS.gene062632:intron	25.0%
!!!	ACTATGCTTTATTTGCAAAT+TGG	+	chr6.4:46924992-46925011	MS.gene062632:intron	25.0%
!!!	ACTTCATTTTTTAACGTTCT+TGG	+	chr6.4:46925197-46925216	MS.gene062632:intron	25.0%
!!!	CTATGCTTTATTTGCAAATT+GGG	+	chr6.4:46924993-46925012	MS.gene062632:intron	25.0%
!!!	GTAGCTTTGTACATTAATTT+AGG	+	chr6.4:46925610-46925629	MS.gene062632:intron	25.0%
!!!	GTTTTAATTTTACAGGTACA+TGG	+	chr6.4:46924119-46924138	MS.gene062632:intron	25.0%
!!!	TGTTTGGATTGTCTTATTTT+TGG	+	chr6.4:46924278-46924297	MS.gene062632:intron	25.0%
!!!	TTTGCTATTTTGATTAGTTG+TGG	+	chr6.4:46925789-46925808	MS.gene062632:intron	25.0%
	AATGGAAGGATTGAGTATTT+GGG	+	chr6.4:46926189-46926208	MS.gene062632:intron	30.0%
	ACTCCACAAAACGTTAAAAA+AGG	-	chr6.4:46925750-46925769	None:intergenic	30.0%
	AGCAAAAGAGAAAACAACAA+AGG	-	chr6.4:46925545-46925564	None:intergenic	30.0%
	AGTCCCTAATCTTATACTAT+AGG	-	chr6.4:46925071-46925090	None:intergenic	30.0%
	CAACAACCAAATTCATAAAC+TGG	-	chr6.4:46926714-46926733	None:intergenic	30.0%
	CATAGTTTAGGGACTATTAA+TGG	+	chr6.4:46926171-46926190	MS.gene062632:intron	30.0%
	CTCCAAGAACGTTAAAAATT+AGG	+	chr6.4:46925587-46925606	MS.gene062632:intron	30.0%
	CTGCAATTTGAAAATGAAGT+TGG	+	chr6.4:46925436-46925455	MS.gene062632:intron	30.0%
	CTTGATCAATAATGAACACA+AGG	+	chr6.4:46926559-46926578	MS.gene062632:intron	30.0%
	GTAACAGAACTTGAAAAAGT+AGG	-	chr6.4:46924065-46924084	None:intergenic	30.0%
	GTCTTACATGTATCATAATC+TGG	+	chr6.4:46926490-46926509	MS.gene062632:intron	30.0%
	GTTTCTTACTTCTTCAAATC+TGG	-	chr6.4:46923993-46924012	None:intergenic	30.0%
	TAATGGAAGGATTGAGTATT+TGG	+	chr6.4:46926188-46926207	MS.gene062632:intron	30.0%
	TAGCTTAGTCAATGAGATTA+GGG	+	chr6.4:46925251-46925270	MS.gene062632:intron	30.0%
	TCAGCGATAAAACACAAATA+AGG	-	chr6.4:46926464-46926483	None:intergenic	30.0%
	TTAGCTTAGTCAATGAGATT+AGG	+	chr6.4:46925250-46925269	MS.gene062632:intron	30.0%
	TTCATAATTCATGTATCTCC+AGG	+	chr6.4:46925398-46925417	MS.gene062632:intron	30.0%
!	AATTGATTCTACTTGAAGCT+AGG	-	chr6.4:46924474-46924493	None:intergenic	30.0%
!	ACCCTAATTTTTAACGTTCT+TGG	-	chr6.4:46925592-46925611	None:intergenic	30.0%
!	ATTTTTAACGTTCTTGGAGT+TGG	-	chr6.4:46925586-46925605	None:intergenic	30.0%
!	CAAAATTTTGTCATCCAGAA+AGG	+	chr6.4:46924917-46924936	MS.gene062632:intron	30.0%
!	GACAATAAGTGATTTGTGTT+TGG	+	chr6.4:46924374-46924393	MS.gene062632:intron	30.0%
!	GTTTTTGCAAATTGAGAATG+AGG	+	chr6.4:46926031-46926050	MS.gene062632:intron	30.0%
!	TAATCTCATTGACTAAGCTA+AGG	-	chr6.4:46925251-46925270	None:intergenic	30.0%
!	TTTTTGAACATTATTGGTGC+TGG	-	chr6.4:46925821-46925840	None:intergenic	30.0%
!!	AACGTTCTTGGAATTTTAGT+TGG	+	chr6.4:46925209-46925228	MS.gene062632:intron	30.0%
!!	CCCATGTTTTTGAACATTAT+TGG	-	chr6.4:46925827-46925846	None:intergenic	30.0%
!!!	AACGTTATTGGAGTTTTAGA+TGG	+	chr6.4:46925341-46925360	MS.gene062632:intron	30.0%
!!!	AATTTCACTCACTTTTTTGC+AGG	+	chr6.4:46926866-46926885	MS.gene062632:intron	30.0%
!!!	ATTTAATTTTGGGATGCATC+GGG	+	chr6.4:46926392-46926411	MS.gene062632:intron	30.0%
!!!	CAATAAGGTTTTGAAAGTTC+AGG	+	chr6.4:46926103-46926122	MS.gene062632:intron	30.0%
!!!	CTTCGTTTTTTGAATGTTTG+TGG	+	chr6.4:46925930-46925949	MS.gene062632:intron	30.0%
	AAATAGTGTTGTCACTGTAG+AGG	+	chr6.4:46926899-46926918	MS.gene062632:CDS	35.0%
	AAGACAACTTAGTGTGTGTT+TGG	+	chr6.4:46924310-46924329	MS.gene062632:intron	35.0%
	AATGCAAATCGCATGATTGT+TGG	+	chr6.4:46926670-46926689	MS.gene062632:CDS	35.0%
	ACGTAACGAGAATTGAAAAG+TGG	-	chr6.4:46924035-46924054	None:intergenic	35.0%
	AGGATAGGTACACTAAATTG+AGG	+	chr6.4:46926073-46926092	MS.gene062632:intron	35.0%
	CGTAACGAGAATTGAAAAGT+GGG	-	chr6.4:46924034-46924053	None:intergenic	35.0%
	CTTCGACCAGTTTATGAATT+TGG	+	chr6.4:46926705-46926724	MS.gene062632:CDS	35.0%
	GAAGTTAGATAAAAGACGAG+AGG	+	chr6.4:46926053-46926072	MS.gene062632:intron	35.0%
	GAGATTGAAAGACTGAATTG+AGG	+	chr6.4:46925475-46925494	MS.gene062632:intron	35.0%
	GCAACGAGAAAAATGACATA+GGG	+	chr6.4:46926755-46926774	MS.gene062632:CDS	35.0%
	GCTTCAAGTAGAATCAATTC+TGG	+	chr6.4:46924475-46924494	MS.gene062632:intron	35.0%
	GTTTAGGGACTATTAATGGA+AGG	+	chr6.4:46926175-46926194	MS.gene062632:intron	35.0%
	TAGATAAAAGACGAGAGGAT+AGG	+	chr6.4:46926058-46926077	MS.gene062632:intron	35.0%
	TAGTCAATGAGATTAGGGAT+TGG	+	chr6.4:46925256-46925275	MS.gene062632:intron	35.0%
	TCTTACTTCTTCAAATCTGG+TGG	-	chr6.4:46923990-46924009	None:intergenic	35.0%
	TTTGGTTGTTGACAATACTG+TGG	+	chr6.4:46926723-46926742	MS.gene062632:CDS	35.0%
!	TTCGTTTGAAGATTGAGTTG+AGG	+	chr6.4:46925688-46925707	MS.gene062632:intron	35.0%
!	TTGGGTGGAGAGATATTTTA+GGG	+	chr6.4:46926207-46926226	MS.gene062632:intron	35.0%
!	TTTGGGTGGAGAGATATTTT+AGG	+	chr6.4:46926206-46926225	MS.gene062632:intron	35.0%
!!!	ACGTTTTGTGGAGTTTTAGA+TGG	+	chr6.4:46925756-46925775	MS.gene062632:intron	35.0%
!!!	ACTTTTTTGCAGGTAATCAG+AGG	+	chr6.4:46926876-46926895	MS.gene062632:intron	35.0%
!!!	CTGCCTTTTTTAACGTTTTG+TGG	+	chr6.4:46925744-46925763	MS.gene062632:intron	35.0%
!!!	GACTGGGTGTTTTTTTAGAA+TGG	+	chr6.4:46925888-46925907	MS.gene062632:intron	35.0%
	AAAGAGAGGGTGACAGTTTA+GGG	+	chr6.4:46925124-46925143	MS.gene062632:intron	40.0%
	AAGGAAAAAAGACCCGATGT+TGG	-	chr6.4:46926445-46926464	None:intergenic	40.0%
	AGGGATTGGAAGACTGAATT+GGG	+	chr6.4:46925270-46925289	MS.gene062632:intron	40.0%
	CGAGAAAAATGACATAGGGA+TGG	+	chr6.4:46926759-46926778	MS.gene062632:CDS	40.0%
	CGGCAAATACAGTTTAAGCA+TGG	+	chr6.4:46926830-46926849	MS.gene062632:intron	40.0%
	GAAAAATGACATAGGGATGG+TGG	+	chr6.4:46926762-46926781	MS.gene062632:CDS	40.0%
	GACAATACTGTGGAGGTAAA+CGG	+	chr6.4:46926733-46926752	MS.gene062632:CDS	40.0%
	GGCAACGAGAAAAATGACAT+AGG	+	chr6.4:46926754-46926773	MS.gene062632:CDS	40.0%
	TAAAGAGAGGGTGACAGTTT+AGG	+	chr6.4:46925123-46925142	MS.gene062632:intron	40.0%
	TACACCTCCAGAATCAATTC+TGG	+	chr6.4:46924552-46924571	MS.gene062632:intron	40.0%
	TAGCTCAATAGGGATGCATT+TGG	+	chr6.4:46926358-46926377	MS.gene062632:intron	40.0%
	TAGGGATTGGAAGACTGAAT+TGG	+	chr6.4:46925269-46925288	MS.gene062632:intron	40.0%
	TGTCATCCAGAAAGGTTTAG+CGG	+	chr6.4:46924925-46924944	MS.gene062632:intron	40.0%
	TTAGTGTGTGTTTGGTTGTG+CGG	+	chr6.4:46924318-46924337	MS.gene062632:intron	40.0%
!	AATTCTGGTCACTCTAGAAG+TGG	+	chr6.4:46924567-46924586	MS.gene062632:intron	40.0%
!	AGAGTGACCAGAATTGATTC+TGG	-	chr6.4:46924562-46924581	None:intergenic	40.0%
!	TTGTAGTTTGTGTGTGGACT+GGG	+	chr6.4:46925872-46925891	MS.gene062632:intron	40.0%
!	TTTGTAGTTTGTGTGTGGAC+TGG	+	chr6.4:46925871-46925890	MS.gene062632:intron	40.0%
!!	AGGGTTTTGTAGTTTGTGTG+TGG	+	chr6.4:46925866-46925885	MS.gene062632:intron	40.0%
	AACAGGAATGAAAGGCTAGC+AGG	-	chr6.4:46924963-46924982	None:intergenic	45.0%
	AACTCGACACACACCAACAT+CGG	+	chr6.4:46926429-46926448	MS.gene062632:intron	45.0%
	CACTTGAACCAGTAGTGAAC+AGG	+	chr6.4:46926922-46926941	MS.gene062632:CDS	45.0%
	CAGTAAGAATCGAACGTTCC+TGG	-	chr6.4:46925419-46925438	None:intergenic	45.0%
	CCAAACAGGCCCTAAATTGA+TGG	-	chr6.4:46924265-46924284	None:intergenic	45.0%
	GAACCAGTAGTGAACAGGAT+CGG	+	chr6.4:46926927-46926946	MS.gene062632:CDS	45.0%
	GGAAGGATTGAGTATTTGGG+TGG	+	chr6.4:46926192-46926211	MS.gene062632:intron	45.0%
	GGGATTGGAAGACTGAATTG+GGG	+	chr6.4:46925271-46925290	MS.gene062632:intron	45.0%
	GGTTGTTGACAATACTGTGG+AGG	+	chr6.4:46926726-46926745	MS.gene062632:CDS	45.0%
	TAAAAGACTAAGGGCCCGTT+TGG	-	chr6.4:46924779-46924798	None:intergenic	45.0%
	TCATAAACTGGTCGAAGCCA+CGG	-	chr6.4:46926702-46926721	None:intergenic	45.0%
	TTGCATTCAGCTTGACTGCA+AGG	-	chr6.4:46926657-46926676	None:intergenic	45.0%
!	CCATCAATTTAGGGCCTGTT+TGG	+	chr6.4:46924262-46924281	MS.gene062632:intron	45.0%
!	GTGACCAGAATTGATTCTGG+AGG	-	chr6.4:46924559-46924578	None:intergenic	45.0%
!!	GCGGTGGAGAGAATTGATTT+TGG	+	chr6.4:46924337-46924356	MS.gene062632:intron	45.0%
!!	AAATAATAATTATATACTTT+AGG	+	chr6.4:46925026-46925045	MS.gene062632:intron	5.0%
!!	AATAATAATTATATACTTTA+GGG	+	chr6.4:46925027-46925046	MS.gene062632:intron	5.0%
!!	TAAATAATGTAAATATAATA+TGG	+	chr6.4:46924828-46924847	MS.gene062632:intron	5.0%
!!!	ATTTTTTTTTATATCAATTT+AGG	+	chr6.4:46924213-46924232	MS.gene062632:intron	5.0%
	ACTCGACACACACCAACATC+GGG	+	chr6.4:46926430-46926449	MS.gene062632:intron	50.0%
	ATGATTGTTGGCACTCTCCG+TGG	+	chr6.4:46926682-46926701	MS.gene062632:CDS	50.0%
	CATCCGATCCTGTTCACTAC+TGG	-	chr6.4:46926933-46926952	None:intergenic	50.0%
	GTGTGTGTTTGGTTGTGCGG+TGG	+	chr6.4:46924321-46924340	MS.gene062632:intron	55.0%
	GCTGCGCCGCTAAACCTTTC+TGG	-	chr6.4:46924934-46924953	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.4	gene	46923969	46926953	46923969	ID=MS.gene062632
chr6.4	mRNA	46923969	46926953	46923969	ID=MS.gene062632.t1;Parent=MS.gene062632
chr6.4	exon	46923969	46924003	46923969	ID=MS.gene062632.t1.exon1;Parent=MS.gene062632.t1
chr6.4	CDS	46923969	46924003	46923969	ID=cds.MS.gene062632.t1;Parent=MS.gene062632.t1
chr6.4	exon	46924134	46924156	46924134	ID=MS.gene062632.t1.exon2;Parent=MS.gene062632.t1
chr6.4	CDS	46924134	46924156	46924134	ID=cds.MS.gene062632.t1;Parent=MS.gene062632.t1
chr6.4	exon	46926662	46926783	46926662	ID=MS.gene062632.t1.exon3;Parent=MS.gene062632.t1
chr6.4	CDS	46926662	46926783	46926662	ID=cds.MS.gene062632.t1;Parent=MS.gene062632.t1
chr6.4	exon	46926888	46926953	46926888	ID=MS.gene062632.t1.exon4;Parent=MS.gene062632.t1
chr6.4	CDS	46926888	46926953	46926888	ID=cds.MS.gene062632.t1;Parent=MS.gene062632.t1

Gene Sequence

>MS.gene062632

ATGAGCAGATCAGGACAACCACCAGATTTGAAGAAGTAAGAAACTAATTATCACTTTCACTACCCACTTTTCAATTCTCGTTACGTTTTTTTTCCTACTTTTTCAAGTTCTGTTACACTTAATCGATAGTATTAATATAATTTTTTTTTTGTTTTAATTTTACAGGTACATGGACAAACAGCTTCAGAGTAAGTTTCTTTGACCTAATTCTTTTTTTCTTTTCTTCTTTCTTAGTTTTATTTTTATTTTTTTTTATATCAATTTAGGTTTTTGAGTTTTTTTAGAAGAATAAACCATCAATTTAGGGCCTGTTTGGATTGTCTTATTTTTGGAGCTTATGCAAGACAACTTAGTGTGTGTTTGGTTGTGCGGTGGAGAGAATTGATTTTGGTTAAAAGTAATTCTGACAATAAGTGATTTGTGTTTGGATACATTTATGTAAAAGTAATTTTAACTATAAATATGTGTGTGAAAATCAATTCTAGAATCAAAAGCTACAAATCCTAGCTTCAAGTAGAATCAATTCTGGATGCAGAATTAATCAATTCTACTTGACAAAAACCAAATTTGTTAGAATCAATTCTACACCTCCAGAATCAATTCTGGTCACTCTAGAAGTGGAACCAAATATACACTTATGCAACTAAATAAGCTTTTATGTATTATTAATAAGCTTGTTAAGGTAGTTATGAAAAAATGGTTCATGAAGATACAATTTTCGTTAGTCAGAAGTGAGAACTTATGAATTAACATAAAAGTTCATTTGTTTGCATAAACTATTTTTCATAATCTAAAAACTAATCTAATCCAAACGGGCCCTTAGTCTTTTAAACTATCAATGTAACTTCAAGTTAATCTCTAAATAATGTAAATATAATATGGTGTCTTTAAAATATATATAATTTGTCAATTTAACCTATGTTATTAAGATGTTAGAGACTAAATTGACAAAATTTTGTCATCCAGAAAGGTTTAGCGGCGCAGCTTGTTGCCTGCTAGCCTTTCATTCCTGTTTTATTTTCTACTATGCTTTATTTGCAAATTGGGAATAAAATTCAAATAATAATTATATACTTTAGGGGTTTTAATTGACGACTTTCCTATAGTATAAGATTAGGGACTGATAATTATATTATATAGTTTTGAGACTAAATTAAAGAGAGGGTGACAGTTTAGGGATGAAATTGCTCGCTTATTCTTTTTAGATTCTCGAAAATATTCTTCTTAAACTTCATTTTTTAACGTTCTTGGAATTTTAGTTGGTGTTTCATTGTTTGCTCCTTAGCTTAGTCAATGAGATTAGGGATTGGAAGACTGAATTGGGGATTGTTTTCTAGAGTTGCAATAATATCATTCTTAAACTTCTTTTTTTAACGTTATTGGAGTTTTAGATGGTTTTTCATTGTTTACTCCTATGTTTAGTTTGAGATTCATAATTCATGTATCTCCAGGAACGTTCGATTCTTACTGCAATTTGAAAATGAAGTTGGAGAAAATGTGAAATTAGAGATTGAAAGACTGAATTGAGGATTATATTTTAAAATAGATAAAATATCCTTTTTAAACTTCATTTCCTTTGTTGTTTTCTCTTTTGCTTAGTTGATGTGATTCATGCCAACTCCAAGAACGTTAAAAATTAGGGTAGCTTTGTACATTAATTTAGGTTTTTGTTGTTAGTTTGTATCGCAAAATATGCTTCTTGAACTTCATCTTTGAACGTTCGTTTGAAGATTGAGTTGAGGACCATTCTTTAGAATTGCAAATATATCTTTAAACTGCCTTTTTTAACGTTTTGTGGAGTTTTAGATGGTACTTCATCGTTTGCTATTTTGATTAGTTGTGGTTTATGCCAGCACCAATAATGTTCAAAAACATGGGTACTATTTTACATAAATTTAGGGTTTTGTAGTTTGTGTGTGGACTGGGTGTTTTTTTAGAATGGCAAAAATATACTTGGTTAACTTCGTTTTTTGAATGTTTGTGGAGTTTTATATAGTACTTTATTTGTTTGCTCATTTGCTTAGTTAATGATATTCATGTCAAACATTCAAAAACTTGATTTGTTTTTGCAAATTGAGAATGAGGAAGTTAGATAAAAGACGAGAGGATAGGTACACTAAATTGAGGAATTTAACAATAAGGTTTTGAAAGTTCAGGACTAACTTTTTTTTTTTAACTTTATGGATTATATTGATGTACTTTCATAGTTTAGGGACTATTAATGGAAGGATTGAGTATTTGGGTGGAGAGATATTTTAGGGACCTTTTAGTAGATTTTAATAGTTTAGGGATCAATTTGATTGTTTATTTACAGTTTGTGTGAGTGATTGTGTCAACAATTCATATTTTTATAGTTTGTGTGAGTGATTGTGTCAACAATTCATATTCATAGCTCAATAGGGATGCATTTGGTCTTTTTTCTAATTTAATTTTGGGATGCATCGGGTCATACACACGCATAACTCGACACACACCAACATCGGGTCTTTTTTCCTTATTTGTGTTTTATCGCTGAAAACAAGTCTTACATGTATCATAATCTGGTTGTGATACCATATTACTGAGAATTGAGATACTCATTTATTGTTAACTTGATCAATAATGAACACAAGGGATCTAACTAACTCTCTTAGATAACTACTAACAAACTTTATCTCTAATAATACTTAAATGTACTTGATATTTCCTTGCAGTCAAGCTGAATGCAAATCGCATGATTGTTGGCACTCTCCGTGGCTTCGACCAGTTTATGAATTTGGTTGTTGACAATACTGTGGAGGTAAACGGCAACGAGAAAAATGACATAGGGATGGTGGTAAGTAACTCCTCATATTCTGCATTATTATTAACTCTAATATTAGCGGCAAATACAGTTTAAGCATGGTTTTTATTTTGTTAATTTCACTCACTTTTTTGCAGGTAATCAGAGGAAATAGTGTTGTCACTGTAGAGGCACTTGAACCAGTAGTGAACAGGATCGGATGA

Protein sequence

>MS.gene062632.t1

MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVVNRIG