AlfalfaGEDB | MS.gene069779

M. sativa cultivar XinJiangDaYe / MS.gene069779

KEGG: K11099
GO: GO:0000387 GO:0005575 GO:0005681 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0022618 GO:0032991 GO:0034622 GO:0043933 GO:0065003 GO:0071826 GO:0071840 GO:1990904
PFAM: PF01423.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069779.t1	XP_024641255.1	100	81	0	0	1	81	1	81	8.80E-36	159.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069779.t1	P24715	95.1	81	4	0	1	81	1	81	1.7e-35	149.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069779.t1	A0A396HK16	100.0	81	0	0	1	81	1	81	6.4e-36	159.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene069779	MS.gene024669	PPI
MS.gene75072	MS.gene069779	PPI
MS.gene069779	MS.gene062632	PPI
MS.gene069779	MS.gene66329	PPI
MS.gene069779	MS.gene058567	PPI
MS.gene069779	MS.gene047872	PPI
MS.gene069779	MS.gene90813	PPI
MS.gene030285	MS.gene069779	PPI
MS.gene046119	MS.gene069779	PPI
MS.gene53517	MS.gene069779	PPI
MS.gene069779	MS.gene060774	PPI
MS.gene82776	MS.gene069779	PPI
MS.gene069779	MS.gene035486	PPI
MS.gene069779	MS.gene013607	PPI
MS.gene058567	MS.gene069779	PPI
MS.gene069779	MS.gene023131	PPI
MS.gene069779	MS.gene011973	PPI
MS.gene069779	MS.gene70292	PPI
MS.gene069779	MS.gene36469	PPI
MS.gene065862	MS.gene069779	PPI
MS.gene069779	MS.gene97334	PPI
MS.gene24692	MS.gene069779	PPI
MS.gene053099	MS.gene069779	PPI
MS.gene069779	MS.gene62660	PPI
MS.gene52398	MS.gene069779	PPI
MS.gene069779	MS.gene053443	PPI
MS.gene069779	MS.gene030697	PPI
MS.gene06729	MS.gene069779	PPI
MS.gene069779	MS.gene66321	PPI
MS.gene069779	MS.gene48652	PPI
MS.gene069779	MS.gene029082	PPI
MS.gene069779	MS.gene015624	PPI
MS.gene072740	MS.gene069779	PPI
MS.gene069779	MS.gene065853	PPI
MS.gene069779	MS.gene35064	PPI
MS.gene069779	MS.gene004548	PPI
MS.gene069779	MS.gene028322	PPI
MS.gene069779	MS.gene58148	PPI
MS.gene069779	MS.gene92231	PPI
MS.gene069779	MS.gene032681	PPI
MS.gene069779	MS.gene67483	PPI
MS.gene069779	MS.gene64804	PPI
MS.gene069779	MS.gene043867	PPI
MS.gene069779	MS.gene065836	PPI
MS.gene069779	MS.gene018076	PPI
MS.gene069779	MS.gene35136	PPI
MS.gene50211	MS.gene069779	PPI
MS.gene069779	MS.gene073888	PPI
MS.gene069779	MS.gene93333	PPI
MS.gene069779	MS.gene040757	PPI
MS.gene21651	MS.gene069779	PPI
MS.gene95848	MS.gene069779	PPI
MS.gene069779	MS.gene028393	PPI
MS.gene069779	MS.gene56983	PPI
MS.gene069779	MS.gene28762	PPI
MS.gene069779	MS.gene073734	PPI
MS.gene069779	MS.gene064051	PPI
MS.gene59503	MS.gene069779	PPI
MS.gene069779	MS.gene95848	PPI
MS.gene069779	MS.gene065857	PPI
MS.gene069779	MS.gene28172	PPI
MS.gene06946	MS.gene069779	PPI
MS.gene069779	MS.gene83565	PPI
MS.gene069779	MS.gene067444	PPI
MS.gene069779	MS.gene007200	PPI
MS.gene83322	MS.gene069779	PPI
MS.gene069779	MS.gene050303	PPI
MS.gene069779	MS.gene04711	PPI
MS.gene069779	MS.gene68906	PPI
MS.gene069779	MS.gene070731	PPI
MS.gene069779	MS.gene85931	PPI
MS.gene069779	MS.gene86968	PPI
MS.gene069779	MS.gene22321	PPI
MS.gene069779	MS.gene00289	PPI
MS.gene069779	MS.gene009798	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069779.t1	MTR_7g104930	100.000	76	0	0	1	76	1	76	1.93e-50	153
MS.gene069779.t1	MTR_6g066250	91.176	68	6	0	14	81	15	82	1.68e-38	123
MS.gene069779.t1	MTR_7g065100	37.500	72	36	1	9	71	10	81	1.24e-12	58.2
MS.gene069779.t1	MTR_8g036205	32.099	81	46	1	9	80	10	90	3.92e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069779.t1	AT2G23930	92.105	76	6	0	1	76	1	76	1.28e-47	146
MS.gene069779.t1	AT3G11500	92.105	76	6	0	1	76	1	76	1.51e-47	145
MS.gene069779.t1	AT3G11500	92.105	76	6	0	1	76	1	76	1.51e-47	145
MS.gene069779.t1	AT2G23930	90.000	50	5	0	27	76	1	50	7.24e-27	93.2
MS.gene069779.t1	AT2G03870	38.028	71	35	1	9	70	10	80	2.33e-12	57.4
MS.gene069779.t1	AT2G03870	38.028	71	35	1	9	70	10	80	2.33e-12	57.4

Find 15 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTCGACCAGTTTATGAATT+TGG	0.234210	6.2:+71686808	MS.gene069779:CDS
GTTTCTTACTTCTTCAAATC+TGG	0.292204	6.2:-71684112	None:intergenic
CAACAACCAAATTCATAAAC+TGG	0.396579	6.2:-71686814	None:intergenic
CATCTCACCATGAGCAGATC+AGG	0.435673	6.2:+71684082	None:intergenic
CACTTGAACCAGTAGTGAAC+AGG	0.448668	6.2:+71687012	MS.gene069779:CDS
GACAATACTGTGGAAGTAAA+CGG	0.452872	6.2:+71686836	MS.gene069779:CDS
CATCCGATCCTGTTCACTAC+TGG	0.472255	6.2:-71687020	None:intergenic
AATGCAAATCGCATGATTGT+TGG	0.502115	6.2:+71686773	MS.gene069779:CDS
TCATAAACTGGTCGAAGCCA+CGG	0.561151	6.2:-71686802	None:intergenic
AGGTTGTCCTGATCTGCTCA+TGG	0.567566	6.2:-71684089	None:intergenic
TCTTACTTCTTCAAATCTGG+AGG	0.574005	6.2:-71684109	None:intergenic
AAATAGTGTTGTCACTGTAG+AGG	0.626056	6.2:+71686989	MS.gene069779:CDS
ATGATTGTTGGTACTCTCCG+TGG	0.628986	6.2:+71686785	MS.gene069779:CDS
GAACCAGTAGTGAACAGGAT+CGG	0.644425	6.2:+71687017	MS.gene069779:CDS
TTTGGTTGTTGACAATACTG+TGG	0.691211	6.2:+71686826	MS.gene069779:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATAAATTGTATACTTT+AGG	+	chr6.2:71685169-71685188	MS.gene069779:intron	10.0%
!!	AAAATAAATTGTATACTTTA+GGG	+	chr6.2:71685170-71685189	MS.gene069779:intron	10.0%
!!	TACATAATGTAAATATAATA+AGG	+	chr6.2:71684955-71684974	MS.gene069779:intron	10.0%
!!!	TATTATTAATAAACTTGTTA+AGG	+	chr6.2:71684775-71684794	MS.gene069779:intron	10.0%
!!	AAAAAAAAAAATGCAGTTTA+AGG	-	chr6.2:71685882-71685901	None:intergenic	15.0%
!!	AAATAAATTGTATACTTTAG+GGG	+	chr6.2:71685171-71685190	MS.gene069779:intron	15.0%
!!	AAATAAGGAAAATAAGAATT+AGG	-	chr6.2:71684300-71684319	None:intergenic	15.0%
!!	TTAAAAAATGAAGTTTAAGA+AGG	-	chr6.2:71685338-71685357	None:intergenic	15.0%
!!!	TAAGTTTTTCATATCAATTT+AGG	+	chr6.2:71684329-71684348	MS.gene069779:intron	15.0%
!!!	TTATTTTGTAGAATTGATTT+TGG	+	chr6.2:71684485-71684504	MS.gene069779:intron	15.0%
!!	AAAAATAAGTTAATCCAAAC+AGG	+	chr6.2:71684889-71684908	MS.gene069779:intron	20.0%
!!	AAATGTGTATAGTATAGTAT+AGG	+	chr6.2:71685206-71685225	MS.gene069779:intron	20.0%
!!	AACTATTAAAATCTGCTAAA+AGG	-	chr6.2:71686308-71686327	None:intergenic	20.0%
!!	AAGAATAAACCATCAATTTA+GGG	+	chr6.2:71684373-71684392	MS.gene069779:intron	20.0%
!!	TAATAATAATGCAGAATATG+AGG	-	chr6.2:71686900-71686919	None:intergenic	20.0%
!!	TAATTATACTGAAATGTACT+TGG	+	chr6.2:71686729-71686748	MS.gene069779:intron	20.0%
!!	TGATATACTTTCATAGTTTA+GGG	+	chr6.2:71686234-71686253	MS.gene069779:intron	20.0%
!!	TTGATATACTTTCATAGTTT+AGG	+	chr6.2:71686233-71686252	MS.gene069779:intron	20.0%
!!!	AATGTTTATGAAGTTTTTGA+TGG	+	chr6.2:71685904-71685923	MS.gene069779:intron	20.0%
!!!	AGTAAAAATCAAGTTTTTGA+AGG	-	chr6.2:71685448-71685467	None:intergenic	20.0%
!!!	CAGCTTTTTACATAAATTTT+GGG	+	chr6.2:71685998-71686017	MS.gene069779:intron	20.0%
!!!	TAGCAGATTTTAATAGTTTA+GGG	+	chr6.2:71686310-71686329	MS.gene069779:intron	20.0%
!!!	TTAGCAGATTTTAATAGTTT+AGG	+	chr6.2:71686309-71686328	MS.gene069779:intron	20.0%
!!!	TTCATTTTTTTTATAGTTCC+TGG	+	chr6.2:71686082-71686101	MS.gene069779:intron	20.0%
!!!	TTGTTAAGGTATTCAAAAAA+TGG	+	chr6.2:71684789-71684808	MS.gene069779:intron	20.0%
!!!	TTTTTCTGTTTTGATTTTAC+AGG	+	chr6.2:71684238-71684257	MS.gene069779:intron	20.0%
!	AAATCAAATGTTTGAACGTT+TGG	-	chr6.2:71686163-71686182	None:intergenic	25.0%
!	AAGTGAGTATCTCAATAATA+TGG	-	chr6.2:71686656-71686675	None:intergenic	25.0%
!	ATTAAAGAGAGTGATAGTTT+AGG	+	chr6.2:71685270-71685289	MS.gene069779:intron	25.0%
!	ATTCCTATTCATAACTCAAT+AGG	+	chr6.2:71686421-71686440	MS.gene069779:intron	25.0%
!	CAATTTCTGTTACACTTAAT+CGG	+	chr6.2:71684194-71684213	MS.gene069779:intron	25.0%
!	GAAGAATAAACCATCAATTT+AGG	+	chr6.2:71684372-71684391	MS.gene069779:intron	25.0%
!	TACAACTCCAGAATTAATTA+TGG	+	chr6.2:71684703-71684722	MS.gene069779:intron	25.0%
!	TTAAAGAGAGTGATAGTTTA+GGG	+	chr6.2:71685271-71685290	MS.gene069779:intron	25.0%
!	TTCCTATTCATAACTCAATA+GGG	+	chr6.2:71686422-71686441	MS.gene069779:intron	25.0%
!!	AATTGATTCTATTTGAAGCT+AGG	-	chr6.2:71684629-71684648	None:intergenic	25.0%
!!	AGAATTGATTCTAACATACT+TGG	-	chr6.2:71684684-71684703	None:intergenic	25.0%
!!	GAAAATCTGAAATTAGAGAT+TGG	+	chr6.2:71685490-71685509	MS.gene069779:intron	25.0%
!!	GCAGCTTTTTACATAAATTT+TGG	+	chr6.2:71685997-71686016	MS.gene069779:intron	25.0%
!!!	ACTTCATTTTTGAATGTTCA+TGG	+	chr6.2:71685705-71685724	MS.gene069779:intron	25.0%
!!!	ACTTCATTTTTTAACGTTCT+TGG	+	chr6.2:71685344-71685363	MS.gene069779:intron	25.0%
	AATGATGAAGTTGTGAGATT+AGG	+	chr6.2:71685809-71685828	MS.gene069779:intron	30.0%
	ACAAAGGAAACGAAGTTTAA+TGG	-	chr6.2:71685559-71685578	None:intergenic	30.0%
	AGAGTGACCATAATTAATTC+TGG	-	chr6.2:71684713-71684732	None:intergenic	30.0%
	AGGTACATTATTTGCAAGTT+GGG	+	chr6.2:71685124-71685143	MS.gene069779:intron	30.0%
	ATCCCTATTGAGTTATGAAT+AGG	-	chr6.2:71686427-71686446	None:intergenic	30.0%
	ATGATGAAGTTGTGAGATTA+GGG	+	chr6.2:71685810-71685829	MS.gene069779:intron	30.0%
	CAAAGGAAACGAAGTTTAAT+GGG	-	chr6.2:71685558-71685577	None:intergenic	30.0%
	CAACAACCAAATTCATAAAC+TGG	-	chr6.2:71686817-71686836	None:intergenic	30.0%
	CATAGTTTAGGGACTATTAA+CGG	+	chr6.2:71686245-71686264	MS.gene069779:intron	30.0%
	CATGTCAAACTTATTTGTTC+TGG	+	chr6.2:71685778-71685797	MS.gene069779:intron	30.0%
	CCTATAGTAGAAAATAACAC+AGG	-	chr6.2:71685107-71685126	None:intergenic	30.0%
	CTAAACAAACCCTAAATTGA+TGG	-	chr6.2:71684385-71684404	None:intergenic	30.0%
	CTGCAATTTGAAAATGAAGT+TGG	+	chr6.2:71685466-71685485	MS.gene069779:intron	30.0%
	GAAAATAACACAGGAATGAA+AGG	-	chr6.2:71685098-71685117	None:intergenic	30.0%
	GAAGTTAAATAAAAGACGAG+AGG	+	chr6.2:71686204-71686223	MS.gene069779:intron	30.0%
	GCTTCAAATAGAATCAATTC+TGG	+	chr6.2:71684630-71684649	MS.gene069779:intron	30.0%
	GTCTTATATGTATCATAGTC+TGG	+	chr6.2:71686622-71686641	MS.gene069779:intron	30.0%
	GTGATAGTTTAACAGACTAA+AGG	-	chr6.2:71684915-71684934	None:intergenic	30.0%
	GTTTCTTACTTCTTCAAATC+TGG	-	chr6.2:71684115-71684134	None:intergenic	30.0%
	TAGGTACATTATTTGCAAGT+TGG	+	chr6.2:71685123-71685142	MS.gene069779:intron	30.0%
	TAGTTTAGGGATGAAATTGT+TGG	+	chr6.2:71685284-71685303	MS.gene069779:intron	30.0%
	TATTTAGTTGCGTGTATGTT+TGG	-	chr6.2:71684746-71684765	None:intergenic	30.0%
	TCTTCTGCAATTTGAAAATG+AGG	+	chr6.2:71686182-71686201	MS.gene069779:intron	30.0%
!	AATGTTCATGGAGTTTTTGA+TGG	+	chr6.2:71685717-71685736	MS.gene069779:intron	30.0%
!	CAAAATTTTGTCATCCAGAA+AGG	+	chr6.2:71685044-71685063	MS.gene069779:intron	30.0%
!	CACAAAAAGTGATTTGTGTT+TGG	+	chr6.2:71684529-71684548	MS.gene069779:intron	30.0%
!!!	AATTTCACTCACTTTTTTGC+AGG	+	chr6.2:71686956-71686975	MS.gene069779:intron	30.0%
!!!	ATTTTGGGTTTTGTAGTTTG+TGG	+	chr6.2:71686013-71686032	MS.gene069779:intron	30.0%
!!!	CCTGTGTTATTTTCTACTAT+AGG	+	chr6.2:71685104-71685123	MS.gene069779:intron	30.0%
!!!	GTTTTGATTTTACAGGTACA+TGG	+	chr6.2:71684245-71684264	MS.gene069779:intron	30.0%
!!!	TCATTTTTTAACGTTCTTGG+AGG	+	chr6.2:71685347-71685366	MS.gene069779:intron	30.0%
!!!	TTTTGGGTTTTGTAGTTTGT+GGG	+	chr6.2:71686014-71686033	MS.gene069779:intron	30.0%
	AAATAGTGTTGTCACTGTAG+AGG	+	chr6.2:71686989-71687008	MS.gene069779:CDS	35.0%
	AATGCAAATCGCATGATTGT+TGG	+	chr6.2:71686773-71686792	MS.gene069779:CDS	35.0%
	ACATTAATAGAGTTTGAGCG+CGG	+	chr6.2:71686920-71686939	MS.gene069779:intron	35.0%
	ACCAAGAACGTTAAAGAACT+AGG	+	chr6.2:71685618-71685637	MS.gene069779:intron	35.0%
	AGCAAAAGAGCAAACAACAA+AGG	-	chr6.2:71685575-71685594	None:intergenic	35.0%
	AGCAAATGAGCGAACAATAA+AGG	-	chr6.2:71685744-71685763	None:intergenic	35.0%
	ATAACTCAATAGGGATGCAT+CGG	+	chr6.2:71686431-71686450	MS.gene069779:intron	35.0%
	CCAAGAACGTTAAAGAACTA+GGG	+	chr6.2:71685619-71685638	MS.gene069779:intron	35.0%
	CTTCGACCAGTTTATGAATT+TGG	+	chr6.2:71686808-71686827	MS.gene069779:CDS	35.0%
	GACAATACTGTGGAAGTAAA+CGG	+	chr6.2:71686836-71686855	MS.gene069779:CDS	35.0%
	GCAACGAGAAAAATGACATA+GGG	+	chr6.2:71686858-71686877	MS.gene069779:CDS	35.0%
	GGGATTTGAAGATTGAATTG+AGG	+	chr6.2:71685830-71685849	MS.gene069779:intron	35.0%
	TCATCATTCATGTCAACTCT+AGG	+	chr6.2:71685414-71685433	MS.gene069779:intron	35.0%
	TCCAACAACGTTCAAAAACT+CGG	+	chr6.2:71685974-71685993	MS.gene069779:intron	35.0%
	TCTTACTTCTTCAAATCTGG+AGG	-	chr6.2:71684112-71684131	None:intergenic	35.0%
	TTAGTGTGTGTTTGTTTGTG+TGG	+	chr6.2:71684437-71684456	MS.gene069779:intron	35.0%
	TTTGGTTGTTGACAATACTG+TGG	+	chr6.2:71686826-71686845	MS.gene069779:CDS	35.0%
!	AATTATGGTCACTCTAGAAG+TGG	+	chr6.2:71684718-71684737	MS.gene069779:intron	35.0%
!	TTCTTTAACGTTCTTGGTGT+TGG	-	chr6.2:71685616-71685635	None:intergenic	35.0%
!!	AACGGATGGATTGAGTATTT+GGG	+	chr6.2:71686263-71686282	MS.gene069779:intron	35.0%
!!	TAACGGATGGATTGAGTATT+TGG	+	chr6.2:71686262-71686281	MS.gene069779:intron	35.0%
!!!	ACTTTTTTGCAGGTAATCAG+AGG	+	chr6.2:71686966-71686985	MS.gene069779:intron	35.0%
!!!	ATAGTTCCTGGAGTTTTAGA+TGG	+	chr6.2:71686094-71686113	MS.gene069779:intron	35.0%
	AACGTTCTTGGAGGTTTAGA+TGG	+	chr6.2:71685356-71685375	MS.gene069779:intron	40.0%
	CCAACAACGTTCAAAAACTC+GGG	+	chr6.2:71685975-71685994	MS.gene069779:intron	40.0%
	CGAGAAAAATGACATAGGGA+TGG	+	chr6.2:71686862-71686881	MS.gene069779:CDS	40.0%
	GAAAAATGACATAGGGATGG+TGG	+	chr6.2:71686865-71686884	MS.gene069779:CDS	40.0%
	GAGATTGGAAGACTGAATTG+AGG	+	chr6.2:71685505-71685524	MS.gene069779:intron	40.0%
	GGCAACGAGAAAAATGACAT+AGG	+	chr6.2:71686857-71686876	MS.gene069779:CDS	40.0%
	GTTTAGGGACTATTAACGGA+TGG	+	chr6.2:71686249-71686268	MS.gene069779:intron	40.0%
	TAACAGACTAAAGGCCTGTT+TGG	-	chr6.2:71684906-71684925	None:intergenic	40.0%
	TAACTCAATAGGGATGCATC+GGG	+	chr6.2:71686432-71686451	MS.gene069779:intron	40.0%
	TGTCATCCAGAAAGGTTTAG+CGG	+	chr6.2:71685052-71685071	MS.gene069779:intron	40.0%
!	CCCTAGTTCTTTAACGTTCT+TGG	-	chr6.2:71685622-71685641	None:intergenic	40.0%
!	GAAGTACCATCTAAAACTCC+AGG	-	chr6.2:71686103-71686122	None:intergenic	40.0%
!	TTGGGTGGAGGGATATTTTA+GGG	+	chr6.2:71686281-71686300	MS.gene069779:intron	40.0%
!	TTTGGGTGGAGGGATATTTT+AGG	+	chr6.2:71686280-71686299	MS.gene069779:intron	40.0%
!!!	GACTGGGCGTTTTTTTAGAA+TGG	+	chr6.2:71686039-71686058	MS.gene069779:intron	40.0%
	ATGATTGTTGGTACTCTCCG+TGG	+	chr6.2:71686785-71686804	MS.gene069779:CDS	45.0%
	CACTTGAACCAGTAGTGAAC+AGG	+	chr6.2:71687012-71687031	MS.gene069779:CDS	45.0%
	GAACCAGTAGTGAACAGGAT+CGG	+	chr6.2:71687017-71687036	MS.gene069779:CDS	45.0%
	GAGAACAAACAGACAGACAG+TGG	-	chr6.2:71686527-71686546	None:intergenic	45.0%
	GGATTGAGTATTTGGGTGGA+GGG	+	chr6.2:71686270-71686289	MS.gene069779:intron	45.0%
	GTGTGTGTTTGTTTGTGTGG+TGG	+	chr6.2:71684440-71684459	MS.gene069779:intron	45.0%
	TCATAAACTGGTCGAAGCCA+CGG	-	chr6.2:71686805-71686824	None:intergenic	45.0%
	TGGATTGAGTATTTGGGTGG+AGG	+	chr6.2:71686269-71686288	MS.gene069779:intron	45.0%
	TTGCATTCAGCTTGACTGCA+AGG	-	chr6.2:71686760-71686779	None:intergenic	45.0%
!	CCCGAGTTTTTGAACGTTGT+TGG	-	chr6.2:71685978-71685997	None:intergenic	45.0%
!	TTGTAGTTTGTGGGCAGACT+GGG	+	chr6.2:71686023-71686042	MS.gene069779:intron	45.0%
!	TTTGTAGTTTGTGGGCAGAC+TGG	+	chr6.2:71686022-71686041	MS.gene069779:intron	45.0%
!!	GGATGGATTGAGTATTTGGG+TGG	+	chr6.2:71686266-71686285	MS.gene069779:intron	45.0%
!!	AACTTAAAAAAAAAAAAATA+AGG	-	chr6.2:71684315-71684334	None:intergenic	5.0%
	CACAGGAATGAAAGGCAAGC+AGG	-	chr6.2:71685090-71685109	None:intergenic	50.0%
	CATCCGATCCTGTTCACTAC+TGG	-	chr6.2:71687023-71687042	None:intergenic	50.0%
	GCTCTTCTGCTTAGTTGACG+TGG	+	chr6.2:71685940-71685959	MS.gene069779:intron	50.0%
	GTTGCGCCGCTAAACCTTTC+TGG	-	chr6.2:71685061-71685080	None:intergenic	55.0%
	GCGCGCGCGCACGCATACAG+AGG	+	chr6.2:71686554-71686573	MS.gene069779:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	71684091	71687043	71684091	ID=MS.gene069779
chr6.2	mRNA	71684091	71687043	71684091	ID=MS.gene069779.t1;Parent=MS.gene069779
chr6.2	exon	71684091	71684125	71684091	ID=MS.gene069779.t1.exon1;Parent=MS.gene069779.t1
chr6.2	CDS	71684091	71684125	71684091	ID=cds.MS.gene069779.t1;Parent=MS.gene069779.t1
chr6.2	exon	71684260	71684282	71684260	ID=MS.gene069779.t1.exon2;Parent=MS.gene069779.t1
chr6.2	CDS	71684260	71684282	71684260	ID=cds.MS.gene069779.t1;Parent=MS.gene069779.t1
chr6.2	exon	71686765	71686886	71686765	ID=MS.gene069779.t1.exon3;Parent=MS.gene069779.t1
chr6.2	CDS	71686765	71686886	71686765	ID=cds.MS.gene069779.t1;Parent=MS.gene069779.t1
chr6.2	exon	71686978	71687043	71686978	ID=MS.gene069779.t1.exon4;Parent=MS.gene069779.t1
chr6.2	CDS	71686978	71687043	71686978	ID=cds.MS.gene069779.t1;Parent=MS.gene069779.t1

Gene Sequence

>MS.gene069779

ATGAGCAGATCAGGACAACCTCCAGATTTGAAGAAGTAAGAAACTAATTATTACTTTCACTACTCACTTTTCAATCATCGTTACTTTTTTTTTTCTCGTTTTTCAATTTCTGTTACACTTAATCGGTGTATTAATATTAATATATTTTTTTTCTGTTTTGATTTTACAGGTACATGGATAAACAGCTTCAGAGTAAGTTTCTTTAACCTAATTCTTATTTTCCTTATTTTTTTTTTTTTAAGTTTTTCATATCAATTTAGGTTTTTGAGTTTTTTATTTTAGAAGAATAAACCATCAATTTAGGGTTTGTTTAGATTGTGTTGTTTTTGAGCTTATGCAAGACAACTTAGTGTGTGTTTGTTTGTGTGGTGGAGATAATTGATTTTGAAATAATTTATTTTGTAGAATTGATTTTGGTTAAAAGAAAAAAGAAATTCTCACAAAAAGTGATTTGTGTTTGGATACATTCATGTAAAAGTGATTTTAACTATAAAGATGTGTGTGAAAATCAATTCTAGAATCAAAAGCTACAAATCCTAGCTTCAAATAGAATCAATTCTGGATGCAAAATCAATTCTACTTGACAAAAACCAAGTATGTTAGAATCAATTCTACAACTCCAGAATTAATTATGGTCACTCTAGAAGTGGAACCAAACATACACGCAACTAAATAAGCTTTATGTATTATTAATAAACTTGTTAAGGTATTCAAAAAATGGCTTATGAAGATACAATTTTCATTAGCGAGAAATTATGTTTGTTCAGTTGTTTGCATAAACTATTTTTCATAAGTTAAAAAAATAAGTTAATCCAAACAGGCCTTTAGTCTGTTAAACTATCACTTTAGCTTCAATTTAATCTCTACATAATGTAAATATAATAAGGTGTTTTTGAAATATATTAAATTTGTCAATTTAACTTGTGTTATTAAGATGTTAGAGACTCAATTGACAAAATTTTGTCATCCAGAAAGGTTTAGCGGCGCAACTTGTTGCCTGCTTGCCTTTCATTCCTGTGTTATTTTCTACTATAGGTACATTATTTGCAAGTTGGGAATAAAATTCAAATATTCAAATAAAAATAAATTGTATACTTTAGGGGTTTAAATTGACGAAATGTGTATAGTATAGTATAGGATTAAGAACTACTTATTATATTTATTTAGTTTAGAGACTAAATTAAAGAGAGTGATAGTTTAGGGATGAAATTGTTGGTTTATTCATTTTAGATTCGCAAAAATATCCTTCTTAAACTTCATTTTTTAACGTTCTTGGAGGTTTAGATGGTTCTTCATTGTTTGCTCGTTTGTTTAGTTTGAGAGTCATCATTCATGTCAACTCTAGGAACATGAACCTTCAAAAACTTGATTTTTACTGCAATTTGAAAATGAAGTTGGAGAAAATCTGAAATTAGAGATTGGAAGACTGAATTGAGGATTATTTTTTAGAATTGCTAAAATATACCCATTAAACTTCGTTTCCTTTGTTGTTTGCTCTTTTGCTTAGTTGATGTGATTCATGCCAACACCAAGAACGTTAAAGAACTAGGGTAGCTTTTTACATCAATTTAGATTTTTTCTAGTTAGTTTGTATCACAAAACTATGCTTCTTAAACTTCATTTTTGAATGTTCATGGAGTTTTTGATGGTCCTTTATTGTTCGCTCATTTGCTTAGTCAATGAGATTCATGTCAAACTTATTTGTTCTGGAATTTGAAAATGATGAAGTTGTGAGATTAGGGATTTGAAGATTGAATTGAGGACTTCTTTTTAGAATTACAAAAATATCCTTAAACTGCATTTTTTTTTTTTTAATGTTTATGAAGTTTTTGATGGTACTTCATTGTTTGCTCTTCTGCTTAGTTGACGTGGTTTATGACAACTCCAACAACGTTCAAAAACTCGGGCAGCTTTTTACATAAATTTTGGGTTTTGTAGTTTGTGGGCAGACTGGGCGTTTTTTTAGAATGGCAAAAGTATACATCTTTAACTTCATTTTTTTTATAGTTCCTGGAGTTTTAGATGGTACTTCATTTGTTTTCTCATTTGCTTAGTTAATGAGATTCTTGCCAAACGTTCAAACATTTGATTTCTTCTGCAATTTGAAAATGAGGAAGTTAAATAAAAGACGAGAGGATTATATTGATATACTTTCATAGTTTAGGGACTATTAACGGATGGATTGAGTATTTGGGTGGAGGGATATTTTAGGGACCTTTTAGCAGATTTTAATAGTTTAGGGATCAATTTGATTGTTTATTTATAGTTTGTGTGAGTGATTGTGTCAACAATTCATATTTTTATAGTTTGTGTGAGTGATTGTCTCAACAATTCCTATTCATAACTCAATAGGGATGCATCGGGTTGTTTTTCTATTTTAATTTTGTTATGCTCTTTTTTATCTACATGTTTGTTTAGTACTTGCGAAATTTTCCACTGTCTGTCTGTTTGTTCTCGATACACGCGCGCGCGCACGCATACAGAGGTTATTTATTTATCTATAGATATTTGTGTTTTATCGCTGAAAACAAGTCTTATATGTATCATAGTCTGGTTGTGAAACCATATTATTGAGATACTCACTTATTGTTAACTTCATCAATAACGCTCTTAACTAACTATTAATAAACTTTATCTCTAATTATACTGAAATGTACTTGGTATTTCCTTGCAGTCAAGCTGAATGCAAATCGCATGATTGTTGGTACTCTCCGTGGCTTCGACCAGTTTATGAATTTGGTTGTTGACAATACTGTGGAAGTAAACGGCAACGAGAAAAATGACATAGGGATGGTGGTAAGTAACTCCTCATATTCTGCATTATTATTAACATTAATAGAGTTTGAGCGCGGTTTTTATAATGTTAATTTCACTCACTTTTTTGCAGGTAATCAGAGGAAATAGTGTTGTCACTGTAGAGGCACTTGAACCAGTAGTGAACAGGATCGGATGA

Protein sequence

>MS.gene069779.t1

MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVVNRIG