AlfalfaGEDB | MS.gene030697

M. sativa cultivar XinJiangDaYe / MS.gene030697

KEGG: K11088
GO: GO:0000387 GO:0005575 GO:0005681 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0022618 GO:0032991 GO:0034622 GO:0043933 GO:0065003 GO:0071826 GO:0071840 GO:1990904
PFAM: PF01423.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030697.t1	XP_003630137.1	100	131	0	0	1	131	1	131	7.00E-51	209.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030697.t1	Q9LM92	93.6	94	6	0	1	94	1	94	2.6e-46	186.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030697.t1	G7LBD3	100.0	131	0	0	1	131	1	131	5.1e-51	209.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene030697	MS.gene023131	PPI
MS.gene06729	MS.gene030697	PPI
MS.gene032681	MS.gene030697	PPI
MS.gene028393	MS.gene030697	PPI
MS.gene030697	MS.gene97334	PPI
MS.gene59047	MS.gene030697	PPI
MS.gene030697	MS.gene055778	PPI
MS.gene030697	MS.gene053443	PPI
MS.gene030697	MS.gene56983	PPI
MS.gene030697	MS.gene90813	PPI
MS.gene030697	MS.gene48652	PPI
MS.gene59503	MS.gene030697	PPI
MS.gene030697	MS.gene065853	PPI
MS.gene030697	MS.gene022597	PPI
MS.gene030697	MS.gene35064	PPI
MS.gene030697	MS.gene028322	PPI
MS.gene009798	MS.gene030697	PPI
MS.gene04711	MS.gene030697	PPI
MS.gene50211	MS.gene030697	PPI
MS.gene030697	MS.gene035486	PPI
MS.gene068867	MS.gene030697	PPI
MS.gene83322	MS.gene030697	PPI
MS.gene030697	MS.gene065836	PPI
MS.gene92231	MS.gene030697	PPI
MS.gene030697	MS.gene018076	PPI
MS.gene069779	MS.gene030697	PPI
MS.gene030697	MS.gene35136	PPI
MS.gene030697	MS.gene073888	PPI
MS.gene038837	MS.gene030697	PPI
MS.gene95848	MS.gene030697	PPI
MS.gene030697	MS.gene01351	PPI
MS.gene62660	MS.gene030697	PPI
MS.gene070248	MS.gene030697	PPI
MS.gene035725	MS.gene030697	PPI
MS.gene06946	MS.gene030697	PPI
MS.gene029082	MS.gene030697	PPI
MS.gene030697	MS.gene056601	PPI
MS.gene006712	MS.gene030697	PPI
MS.gene030697	MS.gene043455	PPI
MS.gene030697	MS.gene67483	PPI
MS.gene030697	MS.gene28762	PPI
MS.gene030697	MS.gene073734	PPI
MS.gene030697	MS.gene012386	PPI
MS.gene61498	MS.gene030697	PPI
MS.gene030697	MS.gene065857	PPI
MS.gene030697	MS.gene043867	PPI
MS.gene046119	MS.gene030697	PPI
MS.gene045843	MS.gene030697	PPI
MS.gene53517	MS.gene030697	PPI
MS.gene030697	MS.gene83565	PPI
MS.gene030697	MS.gene002376	PPI
MS.gene030697	MS.gene067444	PPI
MS.gene64804	MS.gene030697	PPI
MS.gene030697	MS.gene93333	PPI
MS.gene030697	MS.gene007200	PPI
MS.gene030697	MS.gene070731	PPI
MS.gene030697	MS.gene040757	PPI
MS.gene030697	MS.gene047509	PPI
MS.gene015624	MS.gene030697	PPI
MS.gene030697	MS.gene85931	PPI
MS.gene24692	MS.gene030697	PPI
MS.gene030697	MS.gene86968	PPI
MS.gene045470	MS.gene030697	PPI
MS.gene62426	MS.gene030697	PPI
MS.gene030697	MS.gene31434	PPI
MS.gene030697	MS.gene062632	PPI
MS.gene013607	MS.gene030697	PPI
MS.gene82776	MS.gene030697	PPI
MS.gene028868	MS.gene030697	PPI
MS.gene030697	MS.gene050303	PPI
MS.gene058567	MS.gene030697	PPI
MS.gene36469	MS.gene030697	PPI
MS.gene030697	MS.gene060774	PPI
MS.gene065862	MS.gene030697	PPI
MS.gene067362	MS.gene030697	PPI
MS.gene036800	MS.gene030697	PPI
MS.gene053099	MS.gene030697	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030697.t1	MTR_8g092200	100.000	131	0	0	1	131	1	131	5.23e-95	270
MS.gene030697.t1	MTR_8g058537	36.111	72	45	1	7	77	2	73	1.09e-12	61.2
MS.gene030697.t1	MTR_8g058420	36.111	72	45	1	7	77	2	73	1.09e-12	61.2
MS.gene030697.t1	MTR_8g091620	36.111	72	45	1	7	77	2	73	1.41e-12	61.2
MS.gene030697.t1	MTR_7g108700	36.111	72	45	1	7	77	2	73	1.60e-12	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030697.t1	AT1G20580	84.091	132	19	2	1	131	1	131	1.09e-71	211
MS.gene030697.t1	AT1G76300	77.863	131	26	2	1	131	1	128	7.54e-69	203
MS.gene030697.t1	AT5G27720	36.111	72	45	1	7	77	2	73	2.49e-12	60.1

Find 46 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTGGCCGTGGAGCTCCGCC+TGG	0.291361	4.3:+9136604	MS.gene030697:CDS
ATACTAATGTGACAGGTTTA+TGG	0.302035	4.3:+9136239	MS.gene030697:intron
AAAGAAGATGAGTCGTAGTT+TGG	0.344374	4.3:+9134848	None:intergenic
TGATTGAGTGTGAGGATAAC+TGG	0.357866	4.3:+9134955	MS.gene030697:CDS
GAGTCGTAGTTTGGGAATTC+CGG	0.364238	4.3:+9134857	MS.gene030697:CDS
CCGTGGAGCTCCGCCTGGGA+GGG	0.368506	4.3:+9136609	MS.gene030697:CDS
CGTGGAGCTCCGCCTGGGAG+GGG	0.398677	4.3:+9136610	MS.gene030697:CDS
TAGGCTCAAGCTGCTGGCCG+TGG	0.412883	4.3:+9136592	MS.gene030697:intron
AAGAAGATGAGTCGTAGTTT+GGG	0.420399	4.3:+9134849	None:intergenic
GCCGTGGAGCTCCGCCTGGG+AGG	0.444968	4.3:+9136608	MS.gene030697:CDS
CCTGTGTAGGCTCAAGCTGC+TGG	0.451467	4.3:+9136586	MS.gene030697:intron
CTTGAGCATGTATTTATTCG+AGG	0.458500	4.3:+9136103	MS.gene030697:CDS
GCCTCGTGGAGGAGCTTCAC+CGG	0.468346	4.3:-9134876	None:intergenic
CTGGCCGTGGAGCTCCGCCT+GGG	0.468800	4.3:+9136605	MS.gene030697:CDS
TTATTCGAGGTAGCAAAGTC+AGG	0.472481	4.3:+9136116	MS.gene030697:CDS
TGCATCTAAACGCTTGAACA+TGG	0.482856	4.3:-9136289	None:intergenic
GGAGCGTTCTTCAGCATGTC+GGG	0.484052	4.3:-9136267	None:intergenic
GCATCGCTTGGTGTTGGTAG+AGG	0.487013	4.3:+9136415	MS.gene030697:CDS
AAGCTCCTCCACGAGGCCTC+CGG	0.500533	4.3:+9134882	MS.gene030697:CDS
AAGGGCAAGGGTGCATCGCT+TGG	0.512282	4.3:+9136403	MS.gene030697:intron
CCCTCCCAGGCGGAGCTCCA+CGG	0.537318	4.3:-9136609	None:intergenic
AAGGGTGCATCGCTTGGTGT+TGG	0.544000	4.3:+9136409	MS.gene030697:CDS
AAGCATCACTTACACTGCTA+AGG	0.553810	4.3:+9134992	MS.gene030697:CDS
GCGTTTAGATGCAAGAATCA+AGG	0.557683	4.3:+9136299	MS.gene030697:CDS
CTGAATATCTTGAAGGGCAA+GGG	0.558094	4.3:+9136391	MS.gene030697:intron
AATGATGATCACCTCCTCAC+TGG	0.558350	4.3:-9136640	None:intergenic
CTCCACCGTGACGACGTGGC+CGG	0.561230	4.3:-9134901	None:intergenic
GCATCTAAACGCTTGAACAT+GGG	0.565911	4.3:-9136288	None:intergenic
ACTGGTGGTACACCCCTCCC+AGG	0.566465	4.3:-9136622	None:intergenic
AGCAGTTGCAATGCGAGCAA+AGG	0.568696	4.3:+9136441	MS.gene030697:CDS
GGGAGCGTTCTTCAGCATGT+CGG	0.573337	4.3:-9136268	None:intergenic
TGTAAGTGATGCTTTCGAGT+TGG	0.586493	4.3:-9134983	None:intergenic
GGCCTCCGGCCACGTCGTCA+CGG	0.591892	4.3:+9134896	MS.gene030697:CDS
CGACGTGGCCGGAGGCCTCG+TGG	0.593417	4.3:-9134890	None:intergenic
CACCGTGACGACGTGGCCGG+AGG	0.597159	4.3:-9134898	None:intergenic
AGGCAACATGATTGAGTGTG+AGG	0.608133	4.3:+9134947	MS.gene030697:CDS
GTCACGGTGGAGCTCAAGAG+CGG	0.621698	4.3:+9134912	MS.gene030697:CDS
GGGGTGTACCACCAGTGAGG+AGG	0.633056	4.3:+9136629	MS.gene030697:CDS
GGAGGGGTGTACCACCAGTG+AGG	0.654099	4.3:+9136626	MS.gene030697:CDS
GATGATCACCTCCTCACTGG+TGG	0.658723	4.3:-9136637	None:intergenic
TGAGCTCCACCGTGACGACG+TGG	0.674804	4.3:-9134905	None:intergenic
CGTGGCCGGAGGCCTCGTGG+AGG	0.675507	4.3:-9134887	None:intergenic
AAGAGCGGCGAACTCTACAG+AGG	0.686815	4.3:+9134927	MS.gene030697:CDS
TCCGGTGAAGCTCCTCCACG+AGG	0.694574	4.3:+9134875	MS.gene030697:CDS
GGTGGTACACCCCTCCCAGG+CGG	0.697960	4.3:-9136619	None:intergenic
CTCCGGCCACGTCGTCACGG+TGG	0.732137	4.3:+9134899	MS.gene030697:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAACTAGGAATAAAAAA+AGG	-	chr4.3:9136473-9136492	None:intergenic	15.0%
!!	TAGATGAAAATAAATAAACT+AGG	-	chr4.3:9136485-9136504	None:intergenic	15.0%
!!!	TTAATCACTTTTTAATAAGA+AGG	-	chr4.3:9136327-9136346	None:intergenic	15.0%
!!	AAGAAATTAACAAGTTTCAT+AGG	-	chr4.3:9135965-9135984	None:intergenic	20.0%
!!	AATAAATTAACAGTAAGACA+TGG	+	chr4.3:9135830-9135849	MS.gene030697:intron	20.0%
!!	ATATCATTAGAGAAAAAAGT+AGG	+	chr4.3:9135247-9135266	MS.gene030697:intron	20.0%
!!	GAAAAAAAAAGTTACAAAAC+AGG	-	chr4.3:9135429-9135448	None:intergenic	20.0%
!!	GTGATTAATTACTCTATATT+TGG	+	chr4.3:9136339-9136358	MS.gene030697:intron	20.0%
!!	TATCATTAGAGAAAAAAGTA+GGG	+	chr4.3:9135248-9135267	MS.gene030697:intron	20.0%
!!!	ACAAGTAATTTTGTTAAAGA+GGG	+	chr4.3:9135313-9135332	MS.gene030697:intron	20.0%
!!!	CATGTCAATTCTTATTTATA+AGG	+	chr4.3:9135652-9135671	MS.gene030697:intron	20.0%
!!!	CTTTCTAGTATTAACTAATT+TGG	+	chr4.3:9135210-9135229	MS.gene030697:intron	20.0%
!!!	TAACGTAATTATTTCAAGTA+AGG	+	chr4.3:9136171-9136190	MS.gene030697:intron	20.0%
!!!	TACTTTTTTCTCTAATGATA+TGG	-	chr4.3:9135248-9135267	None:intergenic	20.0%
!	TAATCCATTAAGAGAGATTT+GGG	+	chr4.3:9135779-9135798	MS.gene030697:intron	25.0%
!	TCTACAATAGTTGCTAATAA+TGG	+	chr4.3:9136047-9136066	MS.gene030697:intron	25.0%
!	TTAATCCATTAAGAGAGATT+TGG	+	chr4.3:9135778-9135797	MS.gene030697:intron	25.0%
!!	AGAAAAAAGTAGGGATTTTT+GGG	+	chr4.3:9135257-9135276	MS.gene030697:intron	25.0%
!!	AGGGTTTATGTTGTATTTTA+GGG	+	chr4.3:9135154-9135173	MS.gene030697:intron	25.0%
!!	CAAAATTACTTGTGCTTTTA+TGG	-	chr4.3:9135306-9135325	None:intergenic	25.0%
!!	CACAAGTAATTTTGTTAAAG+AGG	+	chr4.3:9135312-9135331	MS.gene030697:intron	25.0%
!!	TAGGGTTTATGTTGTATTTT+AGG	+	chr4.3:9135153-9135172	MS.gene030697:intron	25.0%
!!	TATAGCTTAAAGCTTTTGAT+AGG	+	chr4.3:9135523-9135542	MS.gene030697:intron	25.0%
!!	TTTTGTCTGAATATCTTGAA+GGG	+	chr4.3:9136385-9136404	MS.gene030697:intron	25.0%
!!	TTTTTGTCTGAATATCTTGA+AGG	+	chr4.3:9136384-9136403	MS.gene030697:intron	25.0%
!!!	AAATCTCTCTTAATGGATTA+AGG	-	chr4.3:9135779-9135798	None:intergenic	25.0%
!!!	ATCAAAAGCTTTAAGCTATA+TGG	-	chr4.3:9135523-9135542	None:intergenic	25.0%
!!!	ATTTATTTTCATCTAGCCTT+GGG	+	chr4.3:9136490-9136509	MS.gene030697:intron	25.0%
!!!	TATTTATTTTCATCTAGCCT+TGG	+	chr4.3:9136489-9136508	MS.gene030697:intron	25.0%
!!!	TTACTTTTTCCAAGATGAAA+GGG	-	chr4.3:9135609-9135628	None:intergenic	25.0%
!!!	TTTACTTTTTCCAAGATGAA+AGG	-	chr4.3:9135610-9135629	None:intergenic	25.0%
!!!	TTTTTTGTAGAATTGAGTTG+TGG	+	chr4.3:9135071-9135090	MS.gene030697:intron	25.0%
	ATACTAATGTGACAGGTTTA+TGG	+	chr4.3:9136239-9136258	MS.gene030697:intron	30.0%
	TAAATCGACCCATAAAAGTT+AGG	+	chr4.3:9135342-9135361	MS.gene030697:intron	30.0%
	TAGGGATCTTTGAATACTTA+TGG	+	chr4.3:9135172-9135191	MS.gene030697:intron	30.0%
	TATCAAACTAAGCAATAAGC+TGG	-	chr4.3:9135486-9135505	None:intergenic	30.0%
	TGGATTGAATTTGTAGTGTT+TGG	-	chr4.3:9135698-9135717	None:intergenic	30.0%
	TTACACCACATTTGTAACAA+CGG	-	chr4.3:9136554-9136573	None:intergenic	30.0%
!	AAACAGAGCCTAACTTTTAT+GGG	-	chr4.3:9135353-9135372	None:intergenic	30.0%
!	ATTGAACAAACATTTTCCCA+AGG	-	chr4.3:9136509-9136528	None:intergenic	30.0%
!	GAGAAAAAAGTAGGGATTTT+TGG	+	chr4.3:9135256-9135275	MS.gene030697:intron	30.0%
!	TGTATATCGCATTTTCTGTA+AGG	+	chr4.3:9136200-9136219	MS.gene030697:intron	30.0%
!!	TAATGGATTAAGGCTTTGTT+TGG	-	chr4.3:9135769-9135788	None:intergenic	30.0%
!!!	ATACTTATGGTTTTGAACAC+TGG	+	chr4.3:9135185-9135204	MS.gene030697:intron	30.0%
!!!	GTTACAAAACAGGTCTTTTT+TGG	-	chr4.3:9135419-9135438	None:intergenic	30.0%
!!!	TACTTTTTCCAAGATGAAAG+GGG	-	chr4.3:9135608-9135627	None:intergenic	30.0%
	ACAACCCAAATCTCTCTTAA+TGG	-	chr4.3:9135786-9135805	None:intergenic	35.0%
	AGTTTCATAGGAGAGAAAGA+TGG	-	chr4.3:9135953-9135972	None:intergenic	35.0%
	ATAATGGCTAAATCTTCTGC+AGG	+	chr4.3:9136063-9136082	MS.gene030697:intron	35.0%
	CATAAAAGTTAGGCTCTGTT+TGG	+	chr4.3:9135352-9135371	MS.gene030697:intron	35.0%
	CGTTGTGATATTCGCAAATT+TGG	+	chr4.3:9135113-9135132	MS.gene030697:intron	35.0%
	CTTGAGCATGTATTTATTCG+AGG	+	chr4.3:9136103-9136122	MS.gene030697:CDS	35.0%
	GAAAAAGTCTTTGGTTGTTG+TGG	+	chr4.3:9135889-9135908	MS.gene030697:intron	35.0%
	TGAAGTGATACTAATGTGAC+AGG	+	chr4.3:9136232-9136251	MS.gene030697:intron	35.0%
!	CAAACAGAGCCTAACTTTTA+TGG	-	chr4.3:9135354-9135373	None:intergenic	35.0%
!!	AAAAAGTAGGGATTTTTGGG+TGG	+	chr4.3:9135260-9135279	MS.gene030697:intron	35.0%
!!	TAAGAGAGATTTGGGTTGTA+TGG	+	chr4.3:9135787-9135806	MS.gene030697:intron	35.0%
!!	TTCAATGACTTGCTAGTTGA+AGG	+	chr4.3:9136523-9136542	MS.gene030697:intron	35.0%
	AAGCATCACTTACACTGCTA+AGG	+	chr4.3:9134992-9135011	MS.gene030697:CDS	40.0%
	ACCACATTTGTAACAACGGT+AGG	-	chr4.3:9136550-9136569	None:intergenic	40.0%
	ACCTACCGTTGTTACAAATG+TGG	+	chr4.3:9136546-9136565	MS.gene030697:intron	40.0%
	ACCTCAAATGTTTCCTGTGT+AGG	+	chr4.3:9136573-9136592	MS.gene030697:intron	40.0%
	ATTCGCAAATTTGGCAGATG+TGG	+	chr4.3:9135122-9135141	MS.gene030697:intron	40.0%
	CAAAGTTACCCCTTTCATCT+TGG	+	chr4.3:9135597-9135616	MS.gene030697:intron	40.0%
	CTAGCTTATAGCAGATAAGC+TGG	-	chr4.3:9135721-9135740	None:intergenic	40.0%
	CTGAATATCTTGAAGGGCAA+GGG	+	chr4.3:9136391-9136410	MS.gene030697:intron	40.0%
	GCATCTAAACGCTTGAACAT+GGG	-	chr4.3:9136291-9136310	None:intergenic	40.0%
	GCGTTTAGATGCAAGAATCA+AGG	+	chr4.3:9136299-9136318	MS.gene030697:CDS	40.0%
	TCTGAATATCTTGAAGGGCA+AGG	+	chr4.3:9136390-9136409	MS.gene030697:intron	40.0%
	TCTTGGTGGGAAAAAGTCTT+TGG	+	chr4.3:9135880-9135899	MS.gene030697:intron	40.0%
	TGATTGAGTGTGAGGATAAC+TGG	+	chr4.3:9134955-9134974	MS.gene030697:CDS	40.0%
	TGCATCTAAACGCTTGAACA+TGG	-	chr4.3:9136292-9136311	None:intergenic	40.0%
	TTATTCGAGGTAGCAAAGTC+AGG	+	chr4.3:9136116-9136135	MS.gene030697:CDS	40.0%
!	CTTTTTCCCACCAAGATAGA+CGG	-	chr4.3:9135876-9135895	None:intergenic	40.0%
!	TGTAAGTGATGCTTTCGAGT+TGG	-	chr4.3:9134986-9135005	None:intergenic	40.0%
!	TTTTTCCCACCAAGATAGAC+GGG	-	chr4.3:9135875-9135894	None:intergenic	40.0%
!!!	TAGGGATTTTTGGGTGGTTT+CGG	+	chr4.3:9135266-9135285	MS.gene030697:intron	40.0%
	AAATTTGGCAGATGTGGAGC+GGG	+	chr4.3:9135128-9135147	MS.gene030697:intron	45.0%
	AGGCAACATGATTGAGTGTG+AGG	+	chr4.3:9134947-9134966	MS.gene030697:CDS	45.0%
	CAAATTTGGCAGATGTGGAG+CGG	+	chr4.3:9135127-9135146	MS.gene030697:intron	45.0%
	GAGTCGTAGTTTGGGAATTC+CGG	+	chr4.3:9134857-9134876	MS.gene030697:CDS	45.0%
	GCCTACACAGGAAACATTTG+AGG	-	chr4.3:9136577-9136596	None:intergenic	45.0%
	GCTTATAGCAGATAAGCTGG+TGG	-	chr4.3:9135718-9135737	None:intergenic	45.0%
	TGGCTAAATCTTCTGCAGGA+TGG	+	chr4.3:9136067-9136086	MS.gene030697:intron	45.0%
	AACGATAAACCCAGCCACGA+CGG	-	chr4.3:9135097-9135116	None:intergenic	50.0%
	AGCAGTTGCAATGCGAGCAA+AGG	+	chr4.3:9136441-9136460	MS.gene030697:CDS	50.0%
	ATGTAGCCCGTCTATCTTGG+TGG	+	chr4.3:9135866-9135885	MS.gene030697:intron	50.0%
	CTGATGTAGCCCGTCTATCT+TGG	+	chr4.3:9135863-9135882	MS.gene030697:intron	50.0%
	TGTAGCCCGTCTATCTTGGT+GGG	+	chr4.3:9135867-9135886	MS.gene030697:intron	50.0%
	AAGAGCGGCGAACTCTACAG+AGG	+	chr4.3:9134927-9134946	MS.gene030697:CDS	55.0%
	GCAGATGTGGAGCGGGATTA+GGG	+	chr4.3:9135135-9135154	MS.gene030697:intron	55.0%
!	GAATTGAGTTGTGGCCGTCG+TGG	+	chr4.3:9135080-9135099	MS.gene030697:intron	55.0%
!	GGAGCGTTCTTCAGCATGTC+GGG	-	chr4.3:9136270-9136289	None:intergenic	55.0%
!!	AAGGGTGCATCGCTTGGTGT+TGG	+	chr4.3:9136409-9136428	MS.gene030697:CDS	55.0%
!!	GCATCGCTTGGTGTTGGTAG+AGG	+	chr4.3:9136415-9136434	MS.gene030697:CDS	55.0%
!!	GGGAGCGTTCTTCAGCATGT+CGG	-	chr4.3:9136271-9136290	None:intergenic	55.0%
	CCAGCAGCTTGAGCCTACAC+AGG	-	chr4.3:9136589-9136608	None:intergenic	60.0%
	CCTGTGTAGGCTCAAGCTGC+TGG	+	chr4.3:9136586-9136605	MS.gene030697:intron	60.0%
	GGCAGATGTGGAGCGGGATT+AGG	+	chr4.3:9135134-9135153	MS.gene030697:intron	60.0%
	GTCACGGTGGAGCTCAAGAG+CGG	+	chr4.3:9134912-9134931	MS.gene030697:CDS	60.0%
!	AAGGGCAAGGGTGCATCGCT+TGG	+	chr4.3:9136403-9136422	MS.gene030697:intron	60.0%
	AAGCTCCTCCACGAGGCCTC+CGG	+	chr4.3:9134882-9134901	MS.gene030697:CDS	65.0%
	ACTGGTGGTACACCCCTCCC+AGG	-	chr4.3:9136625-9136644	None:intergenic	65.0%
	GAGTTGTGGCCGTCGTGGCT+GGG	+	chr4.3:9135085-9135104	MS.gene030697:intron	65.0%
	GCCTCGTGGAGGAGCTTCAC+CGG	-	chr4.3:9134879-9134898	None:intergenic	65.0%
	GGGGTGTACCACCAGTGAGG+AGG	+	chr4.3:9136629-9136648	MS.gene030697:CDS	65.0%
	TAGGCTCAAGCTGCTGGCCG+TGG	+	chr4.3:9136592-9136611	MS.gene030697:intron	65.0%
	TCCGGTGAAGCTCCTCCACG+AGG	+	chr4.3:9134875-9134894	MS.gene030697:CDS	65.0%
	TGAGCTCCACCGTGACGACG+TGG	-	chr4.3:9134908-9134927	None:intergenic	65.0%
	TGAGTTGTGGCCGTCGTGGC+TGG	+	chr4.3:9135084-9135103	MS.gene030697:intron	65.0%
!	GGAGGGGTGTACCACCAGTG+AGG	+	chr4.3:9136626-9136645	MS.gene030697:CDS	65.0%
	CTCCACCGTGACGACGTGGC+CGG	-	chr4.3:9134904-9134923	None:intergenic	70.0%
	GGTGGTACACCCCTCCCAGG+CGG	-	chr4.3:9136622-9136641	None:intergenic	70.0%
	CACCGTGACGACGTGGCCGG+AGG	-	chr4.3:9134901-9134920	None:intergenic	75.0%
	CCCTCCCAGGCGGAGCTCCA+CGG	-	chr4.3:9136612-9136631	None:intergenic	75.0%
	CCGTGGAGCTCCGCCTGGGA+GGG	+	chr4.3:9136609-9136628	MS.gene030697:CDS	75.0%
	CGTGGAGCTCCGCCTGGGAG+GGG	+	chr4.3:9136610-9136629	MS.gene030697:CDS	75.0%
	CTCCGGCCACGTCGTCACGG+TGG	+	chr4.3:9134899-9134918	MS.gene030697:CDS	75.0%
	CTGGCCGTGGAGCTCCGCCT+GGG	+	chr4.3:9136605-9136624	MS.gene030697:CDS	75.0%
	GGCCTCCGGCCACGTCGTCA+CGG	+	chr4.3:9134896-9134915	MS.gene030697:CDS	75.0%
!	CGACGTGGCCGGAGGCCTCG+TGG	-	chr4.3:9134893-9134912	None:intergenic	80.0%
!	CGTGGCCGGAGGCCTCGTGG+AGG	-	chr4.3:9134890-9134909	None:intergenic	80.0%
!	GCCGTGGAGCTCCGCCTGGG+AGG	+	chr4.3:9136608-9136627	MS.gene030697:CDS	80.0%
!	GCTGGCCGTGGAGCTCCGCC+TGG	+	chr4.3:9136604-9136623	MS.gene030697:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	9134855	9136654	9134855	ID=MS.gene030697
chr4.3	mRNA	9134855	9136654	9134855	ID=MS.gene030697.t1;Parent=MS.gene030697
chr4.3	exon	9134855	9135013	9134855	ID=MS.gene030697.t1.exon1;Parent=MS.gene030697.t1
chr4.3	CDS	9134855	9135013	9134855	ID=cds.MS.gene030697.t1;Parent=MS.gene030697.t1
chr4.3	exon	9136085	9136137	9136085	ID=MS.gene030697.t1.exon2;Parent=MS.gene030697.t1
chr4.3	CDS	9136085	9136137	9136085	ID=cds.MS.gene030697.t1;Parent=MS.gene030697.t1
chr4.3	exon	9136254	9136320	9136254	ID=MS.gene030697.t1.exon3;Parent=MS.gene030697.t1
chr4.3	CDS	9136254	9136320	9136254	ID=cds.MS.gene030697.t1;Parent=MS.gene030697.t1
chr4.3	exon	9136406	9136462	9136406	ID=MS.gene030697.t1.exon4;Parent=MS.gene030697.t1
chr4.3	CDS	9136406	9136462	9136406	ID=cds.MS.gene030697.t1;Parent=MS.gene030697.t1
chr4.3	exon	9136595	9136654	9136595	ID=MS.gene030697.t1.exon5;Parent=MS.gene030697.t1
chr4.3	CDS	9136595	9136654	9136595	ID=cds.MS.gene030697.t1;Parent=MS.gene030697.t1

Gene Sequence

>MS.gene030697

ATGAGTCGTAGTTTGGGAATTCCGGTGAAGCTCCTCCACGAGGCCTCCGGCCACGTCGTCACGGTGGAGCTCAAGAGCGGCGAACTCTACAGAGGCAACATGATTGAGTGTGAGGATAACTGGAACTGCCAACTCGAAAGCATCACTTACACTGCTAAGGTAAGTGCTTATTTTATTTAATCACTTCTCGTTCATTCATTCATACATTTTTCACAATTTTTTGTAGAATTGAGTTGTGGCCGTCGTGGCTGGGTTTATCGTTGTGATATTCGCAAATTTGGCAGATGTGGAGCGGGATTAGGGTTTATGTTGTATTTTAGGGATCTTTGAATACTTATGGTTTTGAACACTGGATCTTTCTAGTATTAACTAATTTGGTTTGATATCATACCATATCATTAGAGAAAAAAGTAGGGATTTTTGGGTGGTTTCGGACGATGTATATGATCCATAAAAGCACAAGTAATTTTGTTAAAGAGGGTCAGATTAAATCGACCCATAAAAGTTAGGCTCTGTTTGGAAATGTCATACTCTGAGCTTATAGCTTGTAAGTTCATATGACCAAAAAAGACCTGTTTTGTAACTTTTTTTTTCTTTCTTTTTCTCACGAGCTTATAGATTATTTTTGCCAGCTTATTGCTTAGTTTGATAAGCTAGTTCAATTACCATATAGCTTAAAGCTTTTGATAGGCTAGTTCAGTTAGCATATAGCTTACAGCTTATAGCTTATCATTTTCTCTCTCAAAGTTACCCCTTTCATCTTGGAAAAAGTAAACTATTATTTAAACACATTTTATCATGTCAATTCTTATTTATAAGGTAGTTCAACTGCTAATTTTACCAAACACTACAAATTCAATCCACCAGCTTATCTGCTATAAGCTAGCTTATAAGCTATTTGCTATTTTTTGCCAAACAAAGCCTTAATCCATTAAGAGAGATTTGGGTTGTATGGTCTATTTTTAAGATATGATTAATAAATTAACAGTAAGACATGGTTTTGTTTTTCTGATGTAGCCCGTCTATCTTGGTGGGAAAAAGTCTTTGGTTGTTGTGGTTGTATGTATGCTCAAATGTGATCATTGAATTTGCAGTCCATCTTTCTCTCCTATGAAACTTGTTAATTTCTTTATGCTGTGTTTAGACTTTAGTATCTTCATTTCAAGTGTATTTTGTTAAAATTCATAGTGTATCTACAATAGTTGCTAATAATGGCTAAATCTTCTGCAGGATGGAAAAACGTCACAACTTGAGCATGTATTTATTCGAGGTAGCAAAGTCAGGTATGAATCATCATATGTTGCTCAGTTACTATATAACGTAATTATTTCAAGTAAGGTTTTATTGTATATCGCATTTTCTGTAAGGACAGTTCTCTGAAGTGATACTAATGTGACAGGTTTATGGTCATACCCGACATGCTGAAGAACGCTCCCATGTTCAAGCGTTTAGATGCAAGAATCAAGGTACCTTCTTATTAAAAAGTGATTAATTACTCTATATTTGGTCTATTTTGATTCTGTATTCATTTTTTGTCTGAATATCTTGAAGGGCAAGGGTGCATCGCTTGGTGTTGGTAGAGGCAGAGCAGTTGCAATGCGAGCAAAGGTATTTACCTTTTTTTATTCCTAGTTTATTTATTTTCATCTAGCCTTGGGAAAATGTTTGTTCAATGACTTGCTAGTTGAAGGACCTACCGTTGTTACAAATGTGGTGTAACCTCAAATGTTTCCTGTGTAGGCTCAAGCTGCTGGCCGTGGAGCTCCGCCTGGGAGGGGTGTACCACCAGTGAGGAGGTGA

Protein sequence

>MS.gene030697.t1

MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGAPPGRGVPPVRR