Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047665.t1 | XP_003611788.1 | 97.5 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 6.60E-183 | 649.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047665.t1 | Q9FX85 | 64.5 | 299 | 103 | 2 | 27 | 322 | 48 | 346 | 9.6e-106 | 384.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047665.t1 | G7K821 | 97.5 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 4.8e-183 | 649.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047665 | MS.gene012253 | PPI |
| MS.gene24862 | MS.gene047665 | PPI |
| MS.gene055984 | MS.gene047665 | PPI |
| MS.gene025145 | MS.gene047665 | PPI |
| MS.gene047665 | MS.gene034512 | PPI |
| MS.gene047665 | MS.gene026111 | PPI |
| MS.gene012254 | MS.gene047665 | PPI |
| MS.gene051844 | MS.gene047665 | PPI |
| MS.gene40613 | MS.gene047665 | PPI |
| MS.gene047665 | MS.gene04636 | PPI |
| MS.gene018002 | MS.gene047665 | PPI |
| MS.gene047665 | MS.gene85778 | PPI |
| MS.gene52672 | MS.gene047665 | PPI |
| MS.gene37256 | MS.gene047665 | PPI |
| MS.gene047665 | MS.gene051232 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047665.t1 | MTR_5g017850 | 97.546 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 0.0 | 657 |
| MS.gene047665.t1 | MTR_5g017860 | 92.945 | 326 | 23 | 0 | 1 | 326 | 1 | 326 | 0.0 | 631 |
| MS.gene047665.t1 | MTR_4g125940 | 52.941 | 323 | 141 | 5 | 9 | 326 | 13 | 329 | 1.40e-110 | 325 |
| MS.gene047665.t1 | MTR_3g094650 | 52.025 | 321 | 142 | 4 | 11 | 326 | 9 | 322 | 1.16e-109 | 322 |
| MS.gene047665.t1 | MTR_7g093370 | 51.534 | 326 | 153 | 4 | 5 | 326 | 47 | 371 | 2.88e-109 | 323 |
| MS.gene047665.t1 | MTR_2g084080 | 51.411 | 319 | 146 | 3 | 9 | 326 | 7 | 317 | 4.71e-109 | 320 |
| MS.gene047665.t1 | MTR_1g054205 | 51.875 | 320 | 148 | 5 | 11 | 326 | 9 | 326 | 5.71e-109 | 320 |
| MS.gene047665.t1 | MTR_2g084110 | 51.212 | 330 | 144 | 5 | 1 | 326 | 1 | 317 | 1.65e-108 | 319 |
| MS.gene047665.t1 | MTR_2g029815 | 52.288 | 306 | 140 | 4 | 25 | 326 | 27 | 330 | 8.73e-108 | 318 |
| MS.gene047665.t1 | MTR_2g084010 | 53.165 | 316 | 135 | 5 | 16 | 326 | 11 | 318 | 4.35e-107 | 315 |
| MS.gene047665.t1 | MTR_2g084020 | 51.662 | 331 | 142 | 6 | 1 | 326 | 1 | 318 | 5.46e-107 | 315 |
| MS.gene047665.t1 | MTR_7g072480 | 50.000 | 324 | 149 | 5 | 4 | 326 | 5 | 316 | 3.66e-105 | 310 |
| MS.gene047665.t1 | MTR_5g074970 | 49.845 | 323 | 151 | 3 | 8 | 326 | 11 | 326 | 6.26e-105 | 310 |
| MS.gene047665.t1 | MTR_2g029820 | 50.980 | 306 | 144 | 4 | 25 | 326 | 27 | 330 | 1.28e-104 | 310 |
| MS.gene047665.t1 | MTR_2g029560 | 50.470 | 319 | 153 | 4 | 11 | 326 | 9 | 325 | 2.44e-104 | 309 |
| MS.gene047665.t1 | MTR_2g084090 | 49.530 | 319 | 150 | 3 | 12 | 326 | 7 | 318 | 3.77e-104 | 308 |
| MS.gene047665.t1 | MTR_4g083710 | 48.182 | 330 | 161 | 5 | 1 | 326 | 1 | 324 | 1.04e-103 | 307 |
| MS.gene047665.t1 | MTR_2g029800 | 50.980 | 306 | 144 | 4 | 25 | 326 | 27 | 330 | 3.66e-103 | 306 |
| MS.gene047665.t1 | MTR_2g029830 | 50.327 | 306 | 146 | 4 | 25 | 326 | 26 | 329 | 3.99e-103 | 306 |
| MS.gene047665.t1 | MTR_2g029730 | 50.784 | 319 | 152 | 4 | 11 | 326 | 10 | 326 | 4.47e-103 | 306 |
| MS.gene047665.t1 | MTR_2g040000 | 51.656 | 302 | 137 | 4 | 31 | 326 | 33 | 331 | 4.99e-103 | 305 |
| MS.gene047665.t1 | MTR_5g083860 | 48.171 | 328 | 159 | 4 | 3 | 326 | 5 | 325 | 6.85e-103 | 305 |
| MS.gene047665.t1 | MTR_5g021060 | 52.318 | 302 | 141 | 3 | 27 | 326 | 30 | 330 | 2.39e-102 | 304 |
| MS.gene047665.t1 | MTR_2g028980 | 49.394 | 330 | 157 | 6 | 5 | 326 | 3 | 330 | 1.33e-101 | 303 |
| MS.gene047665.t1 | MTR_3g094670 | 50.470 | 319 | 146 | 4 | 13 | 326 | 11 | 322 | 1.57e-100 | 299 |
| MS.gene047665.t1 | MTR_2g029860 | 49.062 | 320 | 153 | 5 | 15 | 326 | 13 | 330 | 2.91e-100 | 299 |
| MS.gene047665.t1 | MTR_2g084000 | 48.910 | 321 | 150 | 5 | 12 | 326 | 7 | 319 | 3.99e-100 | 298 |
| MS.gene047665.t1 | MTR_3g466200 | 47.188 | 320 | 159 | 3 | 10 | 326 | 8 | 320 | 4.60e-100 | 297 |
| MS.gene047665.t1 | MTR_2g029910 | 49.346 | 306 | 150 | 3 | 25 | 326 | 28 | 332 | 1.18e-99 | 298 |
| MS.gene047665.t1 | MTR_7g072510 | 48.287 | 321 | 154 | 4 | 7 | 326 | 3 | 312 | 3.37e-99 | 295 |
| MS.gene047665.t1 | MTR_4g074995 | 48.113 | 318 | 144 | 5 | 12 | 326 | 9 | 308 | 8.60e-99 | 294 |
| MS.gene047665.t1 | MTR_2g029850 | 50.654 | 306 | 145 | 4 | 25 | 326 | 27 | 330 | 1.37e-98 | 295 |
| MS.gene047665.t1 | MTR_3g072190 | 48.137 | 322 | 154 | 4 | 10 | 326 | 5 | 318 | 1.48e-98 | 293 |
| MS.gene047665.t1 | MTR_4g122640 | 50.658 | 304 | 145 | 4 | 25 | 326 | 36 | 336 | 2.04e-98 | 294 |
| MS.gene047665.t1 | MTR_8g076820 | 49.841 | 315 | 153 | 4 | 14 | 326 | 19 | 330 | 2.69e-98 | 293 |
| MS.gene047665.t1 | MTR_2g029750 | 50.654 | 306 | 145 | 4 | 25 | 326 | 27 | 330 | 3.09e-98 | 294 |
| MS.gene047665.t1 | MTR_4g029170 | 46.505 | 329 | 162 | 5 | 4 | 326 | 1 | 321 | 4.54e-98 | 292 |
| MS.gene047665.t1 | MTR_4g125940 | 54.710 | 276 | 117 | 4 | 56 | 326 | 2 | 274 | 5.01e-98 | 291 |
| MS.gene047665.t1 | MTR_4g029180 | 49.333 | 300 | 141 | 4 | 30 | 326 | 30 | 321 | 7.18e-98 | 292 |
| MS.gene047665.t1 | MTR_3g094630 | 49.530 | 319 | 149 | 4 | 13 | 326 | 11 | 322 | 3.57e-96 | 288 |
| MS.gene047665.t1 | MTR_1g115900 | 45.312 | 320 | 160 | 5 | 14 | 326 | 10 | 321 | 2.47e-94 | 283 |
| MS.gene047665.t1 | MTR_2g088770 | 45.283 | 318 | 168 | 5 | 11 | 326 | 12 | 325 | 2.55e-94 | 283 |
| MS.gene047665.t1 | MTR_2g029740 | 48.366 | 306 | 152 | 4 | 25 | 326 | 27 | 330 | 3.49e-94 | 284 |
| MS.gene047665.t1 | MTR_1g022970 | 51.000 | 300 | 143 | 3 | 30 | 326 | 49 | 347 | 4.98e-94 | 283 |
| MS.gene047665.t1 | MTR_4g029200 | 48.515 | 303 | 147 | 3 | 25 | 326 | 44 | 338 | 1.68e-93 | 281 |
| MS.gene047665.t1 | MTR_4g046713 | 42.813 | 327 | 185 | 2 | 1 | 326 | 1 | 326 | 4.60e-93 | 280 |
| MS.gene047665.t1 | MTR_4g074990 | 45.092 | 326 | 155 | 5 | 4 | 326 | 1 | 305 | 8.86e-92 | 276 |
| MS.gene047665.t1 | MTR_3g466180 | 47.826 | 322 | 159 | 3 | 6 | 326 | 10 | 323 | 1.06e-91 | 276 |
| MS.gene047665.t1 | MTR_5g074740 | 48.765 | 324 | 149 | 9 | 9 | 326 | 9 | 321 | 1.76e-90 | 273 |
| MS.gene047665.t1 | MTR_5g074760 | 48.457 | 324 | 150 | 9 | 9 | 326 | 9 | 321 | 3.20e-90 | 273 |
| MS.gene047665.t1 | MTR_5g074860 | 46.847 | 333 | 160 | 8 | 1 | 325 | 1 | 324 | 1.53e-89 | 271 |
| MS.gene047665.t1 | MTR_4g029190 | 47.588 | 311 | 153 | 4 | 19 | 326 | 37 | 340 | 2.19e-89 | 271 |
| MS.gene047665.t1 | MTR_5g074710 | 47.988 | 323 | 151 | 10 | 10 | 326 | 10 | 321 | 4.15e-89 | 270 |
| MS.gene047665.t1 | MTR_7g026990 | 48.485 | 297 | 143 | 4 | 31 | 326 | 35 | 322 | 9.59e-89 | 269 |
| MS.gene047665.t1 | MTR_5g049280 | 45.603 | 307 | 160 | 5 | 26 | 326 | 32 | 337 | 1.59e-88 | 269 |
| MS.gene047665.t1 | MTR_5g014100 | 46.602 | 309 | 153 | 5 | 27 | 326 | 26 | 331 | 1.74e-87 | 266 |
| MS.gene047665.t1 | MTR_1g101830 | 40.798 | 326 | 189 | 3 | 1 | 326 | 1 | 322 | 1.90e-87 | 265 |
| MS.gene047665.t1 | MTR_2g008710 | 44.242 | 330 | 175 | 4 | 1 | 326 | 1 | 325 | 4.37e-87 | 265 |
| MS.gene047665.t1 | MTR_3g092990 | 43.711 | 318 | 176 | 3 | 11 | 326 | 10 | 326 | 2.42e-85 | 260 |
| MS.gene047665.t1 | MTR_4g030890 | 46.205 | 303 | 158 | 3 | 25 | 326 | 98 | 396 | 3.69e-85 | 263 |
| MS.gene047665.t1 | MTR_2g029830 | 50.775 | 258 | 121 | 4 | 73 | 326 | 6 | 261 | 1.81e-84 | 256 |
| MS.gene047665.t1 | MTR_4g133800 | 43.581 | 296 | 158 | 4 | 32 | 326 | 46 | 333 | 2.07e-84 | 258 |
| MS.gene047665.t1 | MTR_5g022870 | 43.125 | 320 | 174 | 5 | 9 | 326 | 3 | 316 | 2.87e-83 | 254 |
| MS.gene047665.t1 | MTR_0155s0040 | 43.046 | 302 | 161 | 4 | 25 | 326 | 25 | 315 | 3.69e-83 | 254 |
| MS.gene047665.t1 | MTR_4g114210 | 42.947 | 319 | 172 | 4 | 13 | 326 | 7 | 320 | 5.02e-83 | 254 |
| MS.gene047665.t1 | MTR_7g086820 | 44.118 | 306 | 164 | 4 | 21 | 326 | 14 | 312 | 7.71e-83 | 253 |
| MS.gene047665.t1 | MTR_1g025980 | 44.164 | 317 | 171 | 4 | 9 | 325 | 7 | 317 | 1.11e-82 | 253 |
| MS.gene047665.t1 | MTR_7g107520 | 44.164 | 317 | 169 | 6 | 11 | 326 | 11 | 320 | 2.42e-82 | 252 |
| MS.gene047665.t1 | MTR_4g031140 | 42.284 | 324 | 180 | 5 | 5 | 326 | 6 | 324 | 4.74e-82 | 252 |
| MS.gene047665.t1 | MTR_6g027440 | 42.138 | 318 | 178 | 4 | 9 | 326 | 3 | 314 | 6.29e-82 | 251 |
| MS.gene047665.t1 | MTR_8g075100 | 43.333 | 300 | 164 | 4 | 27 | 326 | 26 | 319 | 1.98e-81 | 250 |
| MS.gene047665.t1 | MTR_4g074980 | 43.789 | 322 | 148 | 7 | 7 | 326 | 4 | 294 | 2.99e-81 | 248 |
| MS.gene047665.t1 | MTR_2g437770 | 43.189 | 301 | 161 | 4 | 27 | 326 | 50 | 341 | 4.83e-80 | 247 |
| MS.gene047665.t1 | MTR_1g077000 | 39.394 | 330 | 181 | 5 | 5 | 326 | 9 | 327 | 1.30e-79 | 246 |
| MS.gene047665.t1 | MTR_6g043280 | 44.013 | 309 | 159 | 6 | 21 | 326 | 35 | 332 | 1.59e-79 | 246 |
| MS.gene047665.t1 | MTR_4g074980 | 48.438 | 256 | 122 | 5 | 7 | 258 | 4 | 253 | 2.29e-79 | 242 |
| MS.gene047665.t1 | MTR_3g467600 | 43.865 | 326 | 169 | 6 | 7 | 326 | 7 | 324 | 3.94e-79 | 244 |
| MS.gene047665.t1 | MTR_3g072190 | 48.837 | 258 | 123 | 3 | 70 | 326 | 2 | 251 | 4.95e-78 | 239 |
| MS.gene047665.t1 | MTR_2g008160 | 42.020 | 307 | 168 | 5 | 25 | 326 | 22 | 323 | 3.68e-77 | 239 |
| MS.gene047665.t1 | MTR_1g009750 | 40.498 | 321 | 185 | 4 | 10 | 326 | 10 | 328 | 8.03e-77 | 238 |
| MS.gene047665.t1 | MTR_1g090760 | 40.248 | 323 | 186 | 6 | 10 | 326 | 9 | 330 | 3.27e-75 | 234 |
| MS.gene047665.t1 | MTR_6g043240 | 43.182 | 308 | 161 | 5 | 21 | 326 | 36 | 331 | 6.26e-75 | 234 |
| MS.gene047665.t1 | MTR_1g086320 | 40.000 | 330 | 194 | 4 | 1 | 326 | 4 | 333 | 1.12e-74 | 233 |
| MS.gene047665.t1 | MTR_7g029030 | 41.176 | 306 | 166 | 5 | 26 | 326 | 24 | 320 | 3.85e-74 | 231 |
| MS.gene047665.t1 | MTR_3g092990 | 41.509 | 318 | 172 | 4 | 11 | 326 | 10 | 315 | 1.46e-73 | 229 |
| MS.gene047665.t1 | MTR_1g038680 | 42.000 | 300 | 170 | 4 | 31 | 326 | 33 | 332 | 3.08e-73 | 229 |
| MS.gene047665.t1 | MTR_1g086490 | 39.053 | 338 | 193 | 5 | 1 | 326 | 4 | 340 | 5.39e-72 | 226 |
| MS.gene047665.t1 | MTR_7g086870 | 40.667 | 300 | 168 | 4 | 27 | 326 | 22 | 311 | 2.72e-71 | 224 |
| MS.gene047665.t1 | MTR_5g074860 | 42.814 | 334 | 133 | 10 | 1 | 325 | 1 | 285 | 1.75e-70 | 221 |
| MS.gene047665.t1 | MTR_4g087965 | 37.353 | 340 | 192 | 6 | 4 | 322 | 3 | 342 | 2.17e-70 | 223 |
| MS.gene047665.t1 | MTR_2g008730 | 40.483 | 331 | 162 | 6 | 1 | 326 | 1 | 301 | 1.15e-69 | 219 |
| MS.gene047665.t1 | MTR_5g016010 | 36.000 | 325 | 196 | 6 | 11 | 325 | 6 | 328 | 9.09e-68 | 215 |
| MS.gene047665.t1 | MTR_2g099175 | 40.850 | 306 | 171 | 5 | 26 | 326 | 35 | 335 | 1.21e-67 | 215 |
| MS.gene047665.t1 | MTR_4g127670 | 40.523 | 306 | 172 | 6 | 26 | 326 | 23 | 323 | 2.66e-67 | 214 |
| MS.gene047665.t1 | MTR_2g067440 | 37.462 | 331 | 175 | 7 | 25 | 325 | 58 | 386 | 4.72e-67 | 215 |
| MS.gene047665.t1 | MTR_3g105790 | 39.077 | 325 | 190 | 5 | 5 | 326 | 3 | 322 | 6.70e-67 | 213 |
| MS.gene047665.t1 | MTR_6g043460 | 40.260 | 308 | 173 | 4 | 21 | 326 | 30 | 328 | 8.36e-67 | 213 |
| MS.gene047665.t1 | MTR_8g062780 | 36.615 | 325 | 202 | 4 | 4 | 326 | 2 | 324 | 1.48e-64 | 207 |
| MS.gene047665.t1 | MTR_1g009750 | 37.304 | 319 | 181 | 5 | 10 | 326 | 10 | 311 | 7.88e-64 | 204 |
| MS.gene047665.t1 | MTR_2g078610 | 36.364 | 330 | 177 | 6 | 25 | 322 | 74 | 402 | 2.13e-63 | 206 |
| MS.gene047665.t1 | MTR_2g077990 | 37.725 | 334 | 167 | 9 | 25 | 322 | 74 | 402 | 2.78e-63 | 206 |
| MS.gene047665.t1 | MTR_4g095450 | 37.539 | 317 | 186 | 6 | 10 | 322 | 12 | 320 | 7.45e-62 | 200 |
| MS.gene047665.t1 | MTR_2g008160 | 37.459 | 307 | 147 | 5 | 25 | 326 | 22 | 288 | 4.89e-61 | 196 |
| MS.gene047665.t1 | MTR_5g033470 | 36.859 | 312 | 180 | 6 | 26 | 326 | 72 | 377 | 1.44e-60 | 198 |
| MS.gene047665.t1 | MTR_4g132490 | 35.644 | 303 | 190 | 4 | 26 | 326 | 28 | 327 | 1.46e-59 | 194 |
| MS.gene047665.t1 | MTR_0286s0010 | 34.259 | 324 | 200 | 5 | 10 | 326 | 17 | 334 | 1.97e-59 | 194 |
| MS.gene047665.t1 | MTR_6g008075 | 34.259 | 324 | 200 | 5 | 10 | 326 | 17 | 334 | 1.97e-59 | 194 |
| MS.gene047665.t1 | MTR_2g078280 | 35.938 | 320 | 172 | 6 | 25 | 312 | 74 | 392 | 2.11e-57 | 190 |
| MS.gene047665.t1 | MTR_0147s0010 | 34.375 | 320 | 174 | 6 | 27 | 325 | 77 | 381 | 5.41e-56 | 186 |
| MS.gene047665.t1 | MTR_2g067450 | 35.948 | 306 | 186 | 7 | 25 | 325 | 9 | 309 | 6.98e-52 | 174 |
| MS.gene047665.t1 | MTR_2g008160 | 47.904 | 167 | 84 | 2 | 25 | 191 | 22 | 185 | 2.03e-51 | 169 |
| MS.gene047665.t1 | MTR_1g066710 | 33.007 | 306 | 194 | 5 | 25 | 326 | 25 | 323 | 2.01e-50 | 170 |
| MS.gene047665.t1 | MTR_1g066640 | 33.442 | 308 | 190 | 5 | 25 | 326 | 25 | 323 | 1.19e-47 | 163 |
| MS.gene047665.t1 | MTR_4g132110 | 32.673 | 303 | 195 | 4 | 27 | 326 | 32 | 328 | 2.33e-47 | 162 |
| MS.gene047665.t1 | MTR_1g066380 | 32.459 | 305 | 197 | 4 | 25 | 326 | 25 | 323 | 5.04e-47 | 161 |
| MS.gene047665.t1 | MTR_3g105790 | 43.038 | 237 | 129 | 5 | 94 | 326 | 12 | 246 | 1.56e-46 | 158 |
| MS.gene047665.t1 | MTR_7g072490 | 41.702 | 235 | 74 | 3 | 73 | 306 | 2 | 174 | 4.26e-46 | 155 |
| MS.gene047665.t1 | MTR_4g132110 | 32.468 | 308 | 194 | 5 | 27 | 326 | 32 | 333 | 4.90e-46 | 159 |
| MS.gene047665.t1 | MTR_1g066680 | 33.657 | 309 | 187 | 6 | 25 | 326 | 25 | 322 | 1.26e-45 | 158 |
| MS.gene047665.t1 | MTR_5g074700 | 42.424 | 231 | 108 | 8 | 100 | 326 | 5 | 214 | 1.30e-45 | 154 |
| MS.gene047665.t1 | MTR_3g072260 | 59.292 | 113 | 46 | 0 | 26 | 138 | 25 | 137 | 1.59e-41 | 141 |
| MS.gene047665.t1 | MTR_2g029880 | 42.268 | 194 | 96 | 5 | 137 | 326 | 7 | 188 | 4.51e-39 | 137 |
| MS.gene047665.t1 | MTR_3g072210 | 41.885 | 191 | 100 | 5 | 139 | 326 | 56 | 238 | 2.70e-38 | 136 |
| MS.gene047665.t1 | MTR_1g066380 | 31.660 | 259 | 168 | 4 | 71 | 326 | 3 | 255 | 1.46e-34 | 127 |
| MS.gene047665.t1 | MTR_2g077980 | 32.028 | 281 | 142 | 10 | 89 | 326 | 11 | 285 | 3.06e-30 | 116 |
| MS.gene047665.t1 | MTR_7g086790 | 34.392 | 189 | 102 | 5 | 74 | 262 | 17 | 183 | 2.49e-26 | 103 |
| MS.gene047665.t1 | MTR_2g078560 | 29.279 | 222 | 126 | 4 | 132 | 322 | 95 | 316 | 2.73e-24 | 101 |
| MS.gene047665.t1 | MTR_5g058120 | 35.976 | 164 | 93 | 3 | 161 | 324 | 6 | 157 | 2.85e-22 | 94.4 |
| MS.gene047665.t1 | MTR_4g114220 | 54.444 | 90 | 31 | 2 | 47 | 136 | 23 | 102 | 1.18e-21 | 89.7 |
| MS.gene047665.t1 | MTR_1g089005 | 42.520 | 127 | 63 | 3 | 16 | 133 | 1 | 126 | 1.32e-21 | 89.7 |
| MS.gene047665.t1 | MTR_6g048160 | 59.155 | 71 | 25 | 2 | 66 | 136 | 22 | 88 | 5.20e-20 | 83.6 |
| MS.gene047665.t1 | MTR_3g462850 | 34.507 | 142 | 87 | 4 | 190 | 326 | 9 | 149 | 1.47e-18 | 81.6 |
| MS.gene047665.t1 | MTR_2g029930 | 44.118 | 102 | 29 | 3 | 25 | 112 | 17 | 104 | 8.11e-18 | 78.2 |
| MS.gene047665.t1 | MTR_7g086810 | 35.294 | 119 | 51 | 1 | 27 | 145 | 6 | 98 | 1.65e-15 | 75.1 |
| MS.gene047665.t1 | MTR_7g107500 | 44.048 | 84 | 46 | 1 | 243 | 326 | 15 | 97 | 3.66e-15 | 70.5 |
| MS.gene047665.t1 | MTR_5g074770 | 46.067 | 89 | 45 | 2 | 239 | 325 | 21 | 108 | 6.96e-15 | 70.1 |
| MS.gene047665.t1 | MTR_1g098320 | 43.421 | 76 | 43 | 0 | 251 | 326 | 49 | 124 | 8.10e-15 | 70.9 |
| MS.gene047665.t1 | MTR_4g031040 | 32.184 | 174 | 72 | 5 | 88 | 260 | 3 | 131 | 8.28e-15 | 70.9 |
| MS.gene047665.t1 | MTR_7g086785 | 45.205 | 73 | 39 | 1 | 73 | 145 | 4 | 75 | 3.40e-13 | 66.2 |
| MS.gene047665.t1 | MTR_4g012865 | 38.235 | 68 | 42 | 0 | 27 | 94 | 77 | 144 | 1.50e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047665.t1 | AT1G49570 | 64.026 | 303 | 106 | 2 | 23 | 322 | 44 | 346 | 4.51e-136 | 390 |
| MS.gene047665.t1 | AT5G19890 | 54.434 | 327 | 139 | 4 | 4 | 326 | 7 | 327 | 2.40e-117 | 342 |
| MS.gene047665.t1 | AT5G06730 | 55.082 | 305 | 133 | 3 | 25 | 326 | 31 | 334 | 1.68e-114 | 335 |
| MS.gene047665.t1 | AT5G06720 | 50.774 | 323 | 151 | 4 | 11 | 326 | 12 | 333 | 1.88e-108 | 319 |
| MS.gene047665.t1 | AT4G36430 | 49.175 | 303 | 151 | 3 | 26 | 326 | 29 | 330 | 6.90e-104 | 308 |
| MS.gene047665.t1 | AT2G38390 | 50.158 | 317 | 151 | 5 | 15 | 326 | 19 | 333 | 2.17e-102 | 305 |
| MS.gene047665.t1 | AT2G18150 | 46.061 | 330 | 164 | 4 | 10 | 326 | 8 | 336 | 2.43e-102 | 304 |
| MS.gene047665.t1 | AT5G05340 | 47.557 | 307 | 152 | 3 | 22 | 326 | 25 | 324 | 9.88e-100 | 297 |
| MS.gene047665.t1 | AT1G44970 | 51.475 | 305 | 144 | 3 | 25 | 326 | 43 | 346 | 1.12e-98 | 295 |
| MS.gene047665.t1 | AT2G18140 | 48.344 | 302 | 153 | 3 | 27 | 326 | 35 | 335 | 2.72e-98 | 293 |
| MS.gene047665.t1 | AT3G32980 | 48.265 | 317 | 158 | 4 | 15 | 326 | 19 | 334 | 8.45e-97 | 290 |
| MS.gene047665.t1 | AT3G49120 | 47.059 | 323 | 165 | 4 | 9 | 326 | 14 | 335 | 4.08e-96 | 288 |
| MS.gene047665.t1 | AT1G14550 | 46.106 | 321 | 162 | 5 | 10 | 326 | 8 | 321 | 8.26e-96 | 286 |
| MS.gene047665.t1 | AT2G38380 | 48.896 | 317 | 155 | 5 | 15 | 326 | 19 | 333 | 2.57e-94 | 284 |
| MS.gene047665.t1 | AT3G49110 | 47.059 | 323 | 165 | 4 | 9 | 326 | 15 | 336 | 7.49e-94 | 283 |
| MS.gene047665.t1 | AT5G58400 | 45.181 | 332 | 169 | 4 | 1 | 326 | 1 | 325 | 1.20e-93 | 281 |
| MS.gene047665.t1 | AT5G19880 | 47.416 | 329 | 165 | 6 | 4 | 326 | 3 | 329 | 2.51e-93 | 281 |
| MS.gene047665.t1 | AT1G68850 | 44.892 | 323 | 170 | 6 | 11 | 326 | 14 | 335 | 1.06e-92 | 279 |
| MS.gene047665.t1 | AT1G14540 | 46.519 | 316 | 157 | 5 | 16 | 326 | 7 | 315 | 1.52e-92 | 278 |
| MS.gene047665.t1 | AT4G08780 | 47.742 | 310 | 156 | 4 | 22 | 326 | 19 | 327 | 1.92e-92 | 279 |
| MS.gene047665.t1 | AT4G08770 | 48.065 | 310 | 155 | 4 | 22 | 326 | 19 | 327 | 9.39e-92 | 277 |
| MS.gene047665.t1 | AT3G03670 | 44.923 | 325 | 170 | 4 | 6 | 326 | 2 | 321 | 1.99e-91 | 275 |
| MS.gene047665.t1 | AT4G16270 | 48.675 | 302 | 150 | 4 | 27 | 326 | 50 | 348 | 2.46e-91 | 276 |
| MS.gene047665.t1 | AT1G05260 | 44.377 | 329 | 176 | 7 | 1 | 326 | 1 | 325 | 3.57e-91 | 275 |
| MS.gene047665.t1 | AT5G15180 | 45.679 | 324 | 160 | 7 | 15 | 326 | 10 | 329 | 9.66e-91 | 274 |
| MS.gene047665.t1 | AT5G66390 | 44.073 | 329 | 173 | 5 | 8 | 326 | 6 | 333 | 3.42e-90 | 273 |
| MS.gene047665.t1 | AT3G50990 | 45.820 | 323 | 169 | 4 | 9 | 326 | 20 | 341 | 6.35e-90 | 273 |
| MS.gene047665.t1 | AT3G01190 | 45.820 | 323 | 169 | 6 | 5 | 326 | 4 | 321 | 2.42e-89 | 270 |
| MS.gene047665.t1 | AT4G11290 | 46.230 | 305 | 160 | 4 | 25 | 326 | 23 | 326 | 3.49e-89 | 270 |
| MS.gene047665.t1 | AT5G58390 | 46.395 | 319 | 161 | 3 | 11 | 326 | 5 | 316 | 8.68e-89 | 269 |
| MS.gene047665.t1 | AT5G51890 | 41.304 | 322 | 186 | 2 | 5 | 326 | 4 | 322 | 1.25e-88 | 268 |
| MS.gene047665.t1 | AT3G21770 | 44.667 | 300 | 162 | 4 | 25 | 322 | 27 | 324 | 4.03e-86 | 262 |
| MS.gene047665.t1 | AT2G35380 | 43.695 | 341 | 166 | 6 | 4 | 326 | 3 | 335 | 4.50e-86 | 262 |
| MS.gene047665.t1 | AT5G17820 | 42.056 | 321 | 176 | 4 | 6 | 326 | 3 | 313 | 2.72e-85 | 259 |
| MS.gene047665.t1 | AT5G64120 | 42.769 | 325 | 173 | 5 | 9 | 326 | 10 | 328 | 2.66e-84 | 258 |
| MS.gene047665.t1 | AT5G17820 | 42.056 | 321 | 176 | 4 | 6 | 326 | 56 | 366 | 6.07e-84 | 258 |
| MS.gene047665.t1 | AT2G22420 | 43.614 | 321 | 172 | 6 | 8 | 326 | 6 | 319 | 4.45e-83 | 254 |
| MS.gene047665.t1 | AT5G42180 | 41.195 | 318 | 182 | 3 | 8 | 325 | 4 | 316 | 1.50e-80 | 248 |
| MS.gene047665.t1 | AT2G41480 | 42.769 | 325 | 174 | 7 | 8 | 326 | 10 | 328 | 4.21e-80 | 247 |
| MS.gene047665.t1 | AT1G05240 | 43.098 | 297 | 161 | 6 | 30 | 322 | 29 | 321 | 6.18e-80 | 246 |
| MS.gene047665.t1 | AT1G05250 | 43.098 | 297 | 161 | 6 | 30 | 322 | 29 | 321 | 6.18e-80 | 246 |
| MS.gene047665.t1 | AT4G25980 | 41.694 | 307 | 170 | 4 | 25 | 326 | 24 | 326 | 8.18e-80 | 246 |
| MS.gene047665.t1 | AT5G39580 | 42.633 | 319 | 173 | 6 | 9 | 326 | 10 | 319 | 1.80e-78 | 242 |
| MS.gene047665.t1 | AT4G26010 | 41.456 | 316 | 169 | 6 | 12 | 326 | 9 | 309 | 1.79e-77 | 239 |
| MS.gene047665.t1 | AT4G26010 | 41.456 | 316 | 169 | 6 | 12 | 326 | 37 | 337 | 2.15e-77 | 240 |
| MS.gene047665.t1 | AT4G33420 | 41.503 | 306 | 168 | 4 | 21 | 326 | 31 | 325 | 4.93e-77 | 239 |
| MS.gene047665.t1 | AT4G33420 | 41.503 | 306 | 168 | 4 | 21 | 326 | 78 | 372 | 1.98e-76 | 239 |
| MS.gene047665.t1 | AT4G33870 | 37.838 | 333 | 171 | 4 | 25 | 322 | 66 | 397 | 3.84e-75 | 236 |
| MS.gene047665.t1 | AT1G77100 | 40.615 | 325 | 177 | 7 | 9 | 326 | 4 | 319 | 2.26e-74 | 232 |
| MS.gene047665.t1 | AT1G30870 | 41.584 | 303 | 166 | 4 | 27 | 326 | 51 | 345 | 2.64e-74 | 233 |
| MS.gene047665.t1 | AT1G71695 | 39.088 | 307 | 177 | 4 | 23 | 326 | 40 | 339 | 1.14e-73 | 231 |
| MS.gene047665.t1 | AT2G24800 | 43.322 | 307 | 163 | 5 | 25 | 326 | 29 | 329 | 5.22e-73 | 229 |
| MS.gene047665.t1 | AT2G18980 | 38.941 | 321 | 185 | 6 | 11 | 326 | 9 | 323 | 1.47e-72 | 227 |
| MS.gene047665.t1 | AT3G49960 | 39.385 | 325 | 188 | 6 | 9 | 326 | 7 | 329 | 2.94e-72 | 227 |
| MS.gene047665.t1 | AT5G64100 | 41.060 | 302 | 167 | 5 | 28 | 326 | 38 | 331 | 1.49e-71 | 225 |
| MS.gene047665.t1 | AT5G67400 | 40.391 | 307 | 176 | 5 | 25 | 326 | 25 | 329 | 1.95e-71 | 224 |
| MS.gene047665.t1 | AT4G37530 | 41.100 | 309 | 177 | 4 | 22 | 326 | 22 | 329 | 4.19e-71 | 224 |
| MS.gene047665.t1 | AT5G64110 | 41.137 | 299 | 167 | 6 | 31 | 326 | 38 | 330 | 1.89e-70 | 222 |
| MS.gene047665.t1 | AT2G34060 | 37.273 | 330 | 191 | 5 | 10 | 323 | 14 | 343 | 1.15e-69 | 221 |
| MS.gene047665.t1 | AT3G28200 | 39.286 | 308 | 171 | 4 | 25 | 326 | 19 | 316 | 1.79e-69 | 219 |
| MS.gene047665.t1 | AT5G24070 | 40.789 | 304 | 168 | 6 | 28 | 326 | 39 | 335 | 3.88e-69 | 219 |
| MS.gene047665.t1 | AT4G31760 | 40.062 | 322 | 179 | 7 | 12 | 326 | 12 | 326 | 6.06e-69 | 218 |
| MS.gene047665.t1 | AT4G37520 | 39.542 | 306 | 180 | 4 | 25 | 326 | 25 | 329 | 1.95e-68 | 217 |
| MS.gene047665.t1 | AT4G17690 | 39.274 | 303 | 175 | 4 | 27 | 326 | 26 | 322 | 1.96e-68 | 217 |
| MS.gene047665.t1 | AT5G14130 | 37.994 | 329 | 191 | 6 | 5 | 326 | 8 | 330 | 2.25e-68 | 217 |
| MS.gene047665.t1 | AT5G47000 | 36.223 | 323 | 195 | 5 | 10 | 326 | 13 | 330 | 2.79e-68 | 217 |
| MS.gene047665.t1 | AT5G14130 | 37.994 | 329 | 191 | 6 | 5 | 326 | 49 | 371 | 5.15e-68 | 217 |
| MS.gene047665.t1 | AT2G43480 | 41.118 | 304 | 167 | 6 | 28 | 326 | 39 | 335 | 1.79e-67 | 215 |
| MS.gene047665.t1 | AT2G39040 | 41.883 | 308 | 170 | 7 | 26 | 326 | 45 | 350 | 2.14e-67 | 215 |
| MS.gene047665.t1 | AT1G34510 | 38.679 | 318 | 179 | 6 | 10 | 326 | 7 | 309 | 5.67e-67 | 213 |
| MS.gene047665.t1 | AT4G30170 | 37.217 | 309 | 183 | 6 | 23 | 326 | 23 | 325 | 5.95e-67 | 213 |
| MS.gene047665.t1 | AT4G37520 | 38.889 | 306 | 179 | 5 | 25 | 326 | 25 | 326 | 1.84e-65 | 209 |
| MS.gene047665.t1 | AT5G40150 | 37.013 | 308 | 179 | 4 | 25 | 326 | 30 | 328 | 1.19e-63 | 204 |
| MS.gene047665.t1 | AT5G22410 | 36.810 | 326 | 194 | 8 | 4 | 324 | 5 | 323 | 1.64e-63 | 204 |
| MS.gene047665.t1 | AT2G35380 | 43.651 | 252 | 120 | 5 | 89 | 326 | 4 | 247 | 6.32e-61 | 195 |
| MS.gene047665.t1 | AT4G37530 | 41.923 | 260 | 146 | 4 | 22 | 277 | 22 | 280 | 7.71e-60 | 193 |
| MS.gene047665.t1 | AT1G24110 | 36.364 | 330 | 184 | 9 | 12 | 326 | 4 | 322 | 3.57e-56 | 185 |
| MS.gene047665.t1 | AT4G21960 | 33.993 | 303 | 191 | 4 | 27 | 326 | 31 | 327 | 1.70e-51 | 173 |
| MS.gene047665.t1 | AT2G37130 | 35.179 | 307 | 185 | 7 | 26 | 326 | 29 | 327 | 2.17e-50 | 170 |
| MS.gene047665.t1 | AT2G37130 | 35.314 | 303 | 182 | 7 | 30 | 326 | 2 | 296 | 3.07e-50 | 169 |
| MS.gene047665.t1 | AT4G25980 | 46.243 | 173 | 90 | 2 | 25 | 197 | 69 | 238 | 2.77e-49 | 166 |
| MS.gene047665.t1 | AT3G17070 | 33.003 | 303 | 199 | 4 | 27 | 326 | 38 | 339 | 2.39e-48 | 165 |
| MS.gene047665.t1 | AT5G39580 | 45.078 | 193 | 99 | 3 | 9 | 201 | 10 | 195 | 1.56e-47 | 160 |
| MS.gene047665.t1 | AT2G24800 | 44.509 | 173 | 89 | 3 | 25 | 195 | 29 | 196 | 3.99e-39 | 139 |
| MS.gene047665.t1 | AT3G17070 | 31.418 | 261 | 174 | 5 | 69 | 326 | 18 | 276 | 1.80e-33 | 124 |
| MS.gene047665.t1 | AT3G42570 | 33.333 | 138 | 77 | 5 | 56 | 189 | 20 | 146 | 1.11e-12 | 65.1 |
Find 62 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGAGTAAAGGGCCATTT+TGG | 0.134765 | 5.3:-10138369 | MS.gene047665:intron |
| TGCTGTTTCTGTTGAGAAAA+TGG | 0.158102 | 5.3:-10137671 | MS.gene047665:CDS |
| TACTGCCAAGTTCGTTTCTA+AGG | 0.195982 | 5.3:-10138257 | MS.gene047665:CDS |
| ACAATCAGACCAAGCTCTTT+TGG | 0.229945 | 5.3:-10137761 | MS.gene047665:CDS |
| GGCTGATTCTGACTCCAATT+TGG | 0.276217 | 5.3:-10137860 | MS.gene047665:CDS |
| GATGATACGGACACACTAAA+AGG | 0.311071 | 5.3:-10138698 | MS.gene047665:CDS |
| TGACTCCAATTTGGCTCCAT+TGG | 0.325527 | 5.3:-10137851 | MS.gene047665:CDS |
| GGGATCCAATGGAGCCAAAT+TGG | 0.343834 | 5.3:+10137846 | None:intergenic |
| TTCTTTAATTTCAGAGTAAA+GGG | 0.356179 | 5.3:-10138378 | MS.gene047665:intron |
| GAGTCAGAATCAGCCTGATT+TGG | 0.360462 | 5.3:+10137868 | None:intergenic |
| GGTCGCATTGGTGTTCTTAC+GGG | 0.361051 | 5.3:-10137649 | MS.gene047665:CDS |
| CGGGACAGCAGGGTCAAATA+AGG | 0.380062 | 5.3:-10137630 | MS.gene047665:CDS |
| CTTCTTTAATTTCAGAGTAA+AGG | 0.385010 | 5.3:-10138379 | MS.gene047665:intron |
| CCAAGAGGTACAGCCCAAAA+TGG | 0.386408 | 5.3:+10138355 | None:intergenic |
| GCTGTTTCTGTTGAGAAAAT+GGG | 0.404601 | 5.3:-10137670 | MS.gene047665:CDS |
| GGGTCGCATTGGTGTTCTTA+CGG | 0.406580 | 5.3:-10137650 | MS.gene047665:CDS |
| AAGTGATGGATCGGATTTAC+CGG | 0.406603 | 5.3:+10137927 | None:intergenic |
| AGCAGCAATCCTTGAGTCAT+TGG | 0.423951 | 5.3:+10138893 | None:intergenic |
| TATGCAGGTGCACACACCTT+TGG | 0.424594 | 5.3:-10138000 | MS.gene047665:intron |
| TGGTGTTCTTACGGGACAGC+AGG | 0.430592 | 5.3:-10137641 | MS.gene047665:CDS |
| TTACATTGACAAAACAATCA+TGG | 0.440947 | 5.3:+10138850 | None:intergenic |
| TTCTAAGGGTCTTGAAAAGA+AGG | 0.446455 | 5.3:-10138242 | MS.gene047665:CDS |
| AAAATGTATTGAGCAATTCT+GGG | 0.460220 | 5.3:-10137789 | MS.gene047665:CDS |
| CTATTCGACTTTGGTGGCTC+CGG | 0.463524 | 5.3:-10137946 | MS.gene047665:CDS |
| ATGTGATGGATCTGTGCTAC+TGG | 0.464722 | 5.3:-10138720 | MS.gene047665:CDS |
| TTCTAGAGGTTCAAAGGGTG+AGG | 0.465492 | 5.3:+10138285 | None:intergenic |
| AAGCCAAGGCTATTCGACTT+TGG | 0.481179 | 5.3:-10137955 | MS.gene047665:CDS |
| CAAAACAATCATGGAAATGA+AGG | 0.485397 | 5.3:+10138859 | None:intergenic |
| ATGATACGGACACACTAAAA+GGG | 0.487747 | 5.3:-10138697 | MS.gene047665:CDS |
| ATCAAATGTGTTCGTAGTGA+CGG | 0.488914 | 5.3:+10137825 | None:intergenic |
| AAATTGTAGGGCTGTTAACT+AGG | 0.499323 | 5.3:-10137605 | None:intergenic |
| AAGGATGTAGCAGTGCTCTC+AGG | 0.511701 | 5.3:-10138223 | MS.gene047665:intron |
| TGACGATACAACTTCTGCCT+TGG | 0.512521 | 5.3:-10137737 | MS.gene047665:CDS |
| CCAAGGCTATTCGACTTTGG+TGG | 0.513944 | 5.3:-10137952 | MS.gene047665:CDS |
| TCAAATGTGTTCGTAGTGAC+GGG | 0.521557 | 5.3:+10137826 | None:intergenic |
| TGTGTTACATAGGGATGTGA+TGG | 0.525846 | 5.3:-10138734 | MS.gene047665:intron |
| TACTAGATATACAGCATCCC+TGG | 0.528146 | 5.3:+10138550 | None:intergenic |
| TGAAGAATCAAGTGATGGAT+CGG | 0.542739 | 5.3:+10137918 | None:intergenic |
| GTACCTCTTGGTCGTAGAGA+TGG | 0.545618 | 5.3:-10138343 | MS.gene047665:CDS |
| CCACCAAAGTCGAATAGCCT+TGG | 0.547775 | 5.3:+10137952 | None:intergenic |
| ATCTGTGCTACTGGATGATA+CGG | 0.551787 | 5.3:-10138711 | MS.gene047665:CDS |
| ACTGCCAAGTTCGTTTCTAA+GGG | 0.553364 | 5.3:-10138256 | MS.gene047665:CDS |
| TTCGTAGTGACGGGATCCAA+TGG | 0.554752 | 5.3:+10137835 | None:intergenic |
| ATATACTTACTCTAGCAGCC+AGG | 0.559698 | 5.3:-10138568 | MS.gene047665:CDS |
| AAGACCCTTAGAAACGAACT+TGG | 0.562544 | 5.3:+10138252 | None:intergenic |
| TCTAGAGGTTCAAAGGGTGA+GGG | 0.582918 | 5.3:+10138286 | None:intergenic |
| TGGTTAACAATTATAGCAAG+TGG | 0.585337 | 5.3:-10137717 | MS.gene047665:CDS |
| TATCGTCACCCAAAAGAGCT+TGG | 0.589240 | 5.3:+10137752 | None:intergenic |
| CAGCTATAGCCAATGACTCA+AGG | 0.590497 | 5.3:-10138902 | MS.gene047665:CDS |
| AATGCTTTACATTCAAGCCA+AGG | 0.600835 | 5.3:-10137969 | MS.gene047665:CDS |
| TATAGTTGAGAGCACACAAG+TGG | 0.607834 | 5.3:+10138987 | None:intergenic |
| TATACTTACTCTAGCAGCCA+GGG | 0.615867 | 5.3:-10138567 | MS.gene047665:CDS |
| TCAGCACATGAGACTGTGGA+TGG | 0.616095 | 5.3:+10138590 | None:intergenic |
| GTTGAGAAAATGGGTCGCAT+TGG | 0.619440 | 5.3:-10137661 | MS.gene047665:CDS |
| GGTGTTCTTACGGGACAGCA+GGG | 0.621834 | 5.3:-10137640 | MS.gene047665:CDS |
| AGAAGTGAAGAATCAAGTGA+TGG | 0.631778 | 5.3:+10137913 | None:intergenic |
| ATTTGCGTCGCTCTCACTCG+CGG | 0.635311 | 5.3:+10138315 | None:intergenic |
| TGATACGGACACACTAAAAG+GGG | 0.644413 | 5.3:-10138696 | MS.gene047665:CDS |
| TATATCAGCACATGAGACTG+TGG | 0.660979 | 5.3:+10138586 | None:intergenic |
| CTTGCTATAATTGTTAACCA+AGG | 0.663130 | 5.3:+10137720 | None:intergenic |
| AAAGCATTGAGCAAAGCCAA+AGG | 0.681054 | 5.3:+10137984 | None:intergenic |
| GTGCCATCTCTACGACCAAG+AGG | 0.689151 | 5.3:+10138340 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAACTTTATATATAGAAGAA+AGG | + | chr5.3:10138591-10138610 | None:intergenic | 15.0% |
| !!! | ATTTTTGCTATTTATATACT+CGG | - | chr5.3:10137856-10137875 | MS.gene047665:CDS | 15.0% |
| !! | CCTAATAAAAATTCAATAAG+AGG | - | chr5.3:10137994-10138013 | MS.gene047665:CDS | 20.0% |
| !! | TCAAATAAGGAAAAATTGTA+GGG | - | chr5.3:10139036-10139055 | MS.gene047665:CDS | 20.0% |
| !!! | AAGAAGTTCTGATTAATAAT+TGG | + | chr5.3:10138260-10138279 | None:intergenic | 20.0% |
| !!! | ATTTCATTTTTGTGTTACAT+AGG | - | chr5.3:10137909-10137928 | MS.gene047665:CDS | 20.0% |
| !!! | CCTCTTATTGAATTTTTATT+AGG | + | chr5.3:10137997-10138016 | None:intergenic | 20.0% |
| !!! | TACTATATGATAATGTTTCT+GGG | - | chr5.3:10138176-10138195 | MS.gene047665:intron | 20.0% |
| !!! | TATTTCTAACTCTAATGATA+AGG | - | chr5.3:10138564-10138583 | MS.gene047665:CDS | 20.0% |
| !!! | TTAACAATTTTGTTCAGATT+TGG | + | chr5.3:10137717-10137736 | None:intergenic | 20.0% |
| !!! | TTACTATATGATAATGTTTC+TGG | - | chr5.3:10138175-10138194 | MS.gene047665:intron | 20.0% |
| !!! | TTCTTTAATTTCAGAGTAAA+GGG | - | chr5.3:10138275-10138294 | MS.gene047665:CDS | 20.0% |
| !!! | TTTCATTTTTGTGTTACATA+GGG | - | chr5.3:10137910-10137929 | MS.gene047665:CDS | 20.0% |
| ! | AAAAATGTATTGAGCAATTC+TGG | - | chr5.3:10138863-10138882 | MS.gene047665:CDS | 25.0% |
| ! | AAAATGTATTGAGCAATTCT+GGG | - | chr5.3:10138864-10138883 | MS.gene047665:CDS | 25.0% |
| ! | GTCAAATAAGGAAAAATTGT+AGG | - | chr5.3:10139035-10139054 | MS.gene047665:CDS | 25.0% |
| ! | TTAATTATTTGGAGACTACT+TGG | - | chr5.3:10138138-10138157 | MS.gene047665:intron | 25.0% |
| ! | TTACATTGACAAAACAATCA+TGG | + | chr5.3:10137806-10137825 | None:intergenic | 25.0% |
| ! | TTAGTCAATACACATGAAAT+TGG | + | chr5.3:10138623-10138642 | None:intergenic | 25.0% |
| !! | ACTATATGATAATGTTTCTG+GGG | - | chr5.3:10138177-10138196 | MS.gene047665:intron | 25.0% |
| !! | CTTCTTTAATTTCAGAGTAA+AGG | - | chr5.3:10138274-10138293 | MS.gene047665:CDS | 25.0% |
| !!! | TTATGTTATCGTCATTTTCA+AGG | - | chr5.3:10138535-10138554 | MS.gene047665:intron | 25.0% |
| ACTAAGTACTCAATATATGC+AGG | - | chr5.3:10138638-10138657 | MS.gene047665:CDS | 30.0% | |
| CAAAACAATCATGGAAATGA+AGG | + | chr5.3:10137797-10137816 | None:intergenic | 30.0% | |
| GAACTCGCTGTTTAATTATT+TGG | - | chr5.3:10138127-10138146 | MS.gene047665:intron | 30.0% | |
| TGGTTAACAATTATAGCAAG+TGG | - | chr5.3:10138936-10138955 | MS.gene047665:CDS | 30.0% | |
| ! | AAGTCTCTGAAAAACAGAAT+AGG | + | chr5.3:10138962-10138981 | None:intergenic | 30.0% |
| ! | ACAAAAAGTATGTCCAAATC+AGG | - | chr5.3:10138772-10138791 | MS.gene047665:intron | 30.0% |
| ! | CTTGCTATAATTGTTAACCA+AGG | + | chr5.3:10138936-10138955 | None:intergenic | 30.0% |
| !! | AATGTTTTCTAGAGGTTCAA+AGG | + | chr5.3:10138377-10138396 | None:intergenic | 30.0% |
| !! | ATGTTTTCTAGAGGTTCAAA+GGG | + | chr5.3:10138376-10138395 | None:intergenic | 30.0% |
| AATGCTTTACATTCAAGCCA+AGG | - | chr5.3:10138684-10138703 | MS.gene047665:CDS | 35.0% | |
| AGAAGTGAAGAATCAAGTGA+TGG | + | chr5.3:10138743-10138762 | None:intergenic | 35.0% | |
| ATCAAATGTGTTCGTAGTGA+CGG | + | chr5.3:10138831-10138850 | None:intergenic | 35.0% | |
| ATGATACGGACACACTAAAA+GGG | - | chr5.3:10137956-10137975 | MS.gene047665:CDS | 35.0% | |
| GACGATAACATAACTCGAAT+AGG | + | chr5.3:10138528-10138547 | None:intergenic | 35.0% | |
| ! | TTCTAAGGGTCTTGAAAAGA+AGG | - | chr5.3:10138411-10138430 | MS.gene047665:intron | 35.0% |
| ! | TTGGCAGTAATGTTTTCTAG+AGG | + | chr5.3:10138385-10138404 | None:intergenic | 35.0% |
| !! | GCTGTTTCTGTTGAGAAAAT+GGG | - | chr5.3:10138983-10139002 | MS.gene047665:CDS | 35.0% |
| !! | TGAAGAATCAAGTGATGGAT+CGG | + | chr5.3:10138738-10138757 | None:intergenic | 35.0% |
| !! | TGCTGTTTCTGTTGAGAAAA+TGG | - | chr5.3:10138982-10139001 | MS.gene047665:CDS | 35.0% |
| AAGACCCTTAGAAACGAACT+TGG | + | chr5.3:10138404-10138423 | None:intergenic | 40.0% | |
| ACTGCCAAGTTCGTTTCTAA+GGG | - | chr5.3:10138397-10138416 | MS.gene047665:intron | 40.0% | |
| ATATACTTACTCTAGCAGCC+AGG | - | chr5.3:10138085-10138104 | MS.gene047665:intron | 40.0% | |
| GATGATACGGACACACTAAA+AGG | - | chr5.3:10137955-10137974 | MS.gene047665:CDS | 40.0% | |
| TACTAGATATACAGCATCCC+TGG | + | chr5.3:10138106-10138125 | None:intergenic | 40.0% | |
| TACTGCCAAGTTCGTTTCTA+AGG | - | chr5.3:10138396-10138415 | MS.gene047665:intron | 40.0% | |
| TATACTTACTCTAGCAGCCA+GGG | - | chr5.3:10138086-10138105 | MS.gene047665:intron | 40.0% | |
| TATATCAGCACATGAGACTG+TGG | + | chr5.3:10138070-10138089 | None:intergenic | 40.0% | |
| TCAAATGTGTTCGTAGTGAC+GGG | + | chr5.3:10138830-10138849 | None:intergenic | 40.0% | |
| TGATACGGACACACTAAAAG+GGG | - | chr5.3:10137957-10137976 | MS.gene047665:CDS | 40.0% | |
| TGTGTTACATAGGGATGTGA+TGG | - | chr5.3:10137919-10137938 | MS.gene047665:CDS | 40.0% | |
| ! | ACAATCAGACCAAGCTCTTT+TGG | - | chr5.3:10138892-10138911 | MS.gene047665:CDS | 40.0% |
| ! | ATCTGTGCTACTGGATGATA+CGG | - | chr5.3:10137942-10137961 | MS.gene047665:CDS | 40.0% |
| ! | CAATCAGACCAAGCTCTTTT+GGG | - | chr5.3:10138893-10138912 | MS.gene047665:CDS | 40.0% |
| ! | TATAGTTGAGAGCACACAAG+TGG | + | chr5.3:10137669-10137688 | None:intergenic | 40.0% |
| ! | TTCAGAGTAAAGGGCCATTT+TGG | - | chr5.3:10138284-10138303 | MS.gene047665:CDS | 40.0% |
| !! | AAAGCATTGAGCAAAGCCAA+AGG | + | chr5.3:10138672-10138691 | None:intergenic | 40.0% |
| !! | AAGTGATGGATCGGATTTAC+CGG | + | chr5.3:10138729-10138748 | None:intergenic | 40.0% |
| !! | TCAGAGTAAAGGGCCATTTT+GGG | - | chr5.3:10138285-10138304 | MS.gene047665:CDS | 40.0% |
| AAGCCAAGGCTATTCGACTT+TGG | - | chr5.3:10138698-10138717 | MS.gene047665:CDS | 45.0% | |
| AGCAGCAATCCTTGAGTCAT+TGG | + | chr5.3:10137763-10137782 | None:intergenic | 45.0% | |
| CAGCTATAGCCAATGACTCA+AGG | - | chr5.3:10137751-10137770 | MS.gene047665:CDS | 45.0% | |
| GAGTCAGAATCAGCCTGATT+TGG | + | chr5.3:10138788-10138807 | None:intergenic | 45.0% | |
| GTTGAGAAAATGGGTCGCAT+TGG | - | chr5.3:10138992-10139011 | MS.gene047665:CDS | 45.0% | |
| TATCGTCACCCAAAAGAGCT+TGG | + | chr5.3:10138904-10138923 | None:intergenic | 45.0% | |
| TCTAGAGGTTCAAAGGGTGA+GGG | + | chr5.3:10138370-10138389 | None:intergenic | 45.0% | |
| TGACGATACAACTTCTGCCT+TGG | - | chr5.3:10138916-10138935 | MS.gene047665:CDS | 45.0% | |
| ! | GGCTGATTCTGACTCCAATT+TGG | - | chr5.3:10138793-10138812 | MS.gene047665:intron | 45.0% |
| ! | TGACTCCAATTTGGCTCCAT+TGG | - | chr5.3:10138802-10138821 | MS.gene047665:intron | 45.0% |
| ! | TTCTAGAGGTTCAAAGGGTG+AGG | + | chr5.3:10138371-10138390 | None:intergenic | 45.0% |
| !! | ATGTGATGGATCTGTGCTAC+TGG | - | chr5.3:10137933-10137952 | MS.gene047665:CDS | 45.0% |
| AAGGATGTAGCAGTGCTCTC+AGG | - | chr5.3:10138430-10138449 | MS.gene047665:intron | 50.0% | |
| CCAAGGCTATTCGACTTTGG+TGG | - | chr5.3:10138701-10138720 | MS.gene047665:CDS | 50.0% | |
| CCACCAAAGTCGAATAGCCT+TGG | + | chr5.3:10138704-10138723 | None:intergenic | 50.0% | |
| GGGATCCAATGGAGCCAAAT+TGG | + | chr5.3:10138810-10138829 | None:intergenic | 50.0% | |
| GTACCTCTTGGTCGTAGAGA+TGG | - | chr5.3:10138310-10138329 | MS.gene047665:CDS | 50.0% | |
| TATGCAGGTGCACACACCTT+TGG | - | chr5.3:10138653-10138672 | MS.gene047665:CDS | 50.0% | |
| TCAGCACATGAGACTGTGGA+TGG | + | chr5.3:10138066-10138085 | None:intergenic | 50.0% | |
| ! | CCAAGAGGTACAGCCCAAAA+TGG | + | chr5.3:10138301-10138320 | None:intergenic | 50.0% |
| ! | CCATTTTGGGCTGTACCTCT+TGG | - | chr5.3:10138298-10138317 | MS.gene047665:CDS | 50.0% |
| ! | CTATTCGACTTTGGTGGCTC+CGG | - | chr5.3:10138707-10138726 | MS.gene047665:CDS | 50.0% |
| ! | GGGTCGCATTGGTGTTCTTA+CGG | - | chr5.3:10139003-10139022 | MS.gene047665:CDS | 50.0% |
| ! | GGTCGCATTGGTGTTCTTAC+GGG | - | chr5.3:10139004-10139023 | MS.gene047665:CDS | 50.0% |
| ! | TTCGTAGTGACGGGATCCAA+TGG | + | chr5.3:10138821-10138840 | None:intergenic | 50.0% |
| ATTTGCGTCGCTCTCACTCG+CGG | + | chr5.3:10138341-10138360 | None:intergenic | 55.0% | |
| CGGGACAGCAGGGTCAAATA+AGG | - | chr5.3:10139023-10139042 | MS.gene047665:CDS | 55.0% | |
| GGTGTTCTTACGGGACAGCA+GGG | - | chr5.3:10139013-10139032 | MS.gene047665:CDS | 55.0% | |
| GTGCCATCTCTACGACCAAG+AGG | + | chr5.3:10138316-10138335 | None:intergenic | 55.0% | |
| TGGTGTTCTTACGGGACAGC+AGG | - | chr5.3:10139012-10139031 | MS.gene047665:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 10137606 | 10139069 | 10137606 | ID=MS.gene047665 |
| chr5.3 | mRNA | 10137606 | 10139069 | 10137606 | ID=MS.gene047665.t1;Parent=MS.gene047665 |
| chr5.3 | exon | 10138854 | 10139069 | 10138854 | ID=MS.gene047665.t1.exon1;Parent=MS.gene047665.t1 |
| chr5.3 | CDS | 10138854 | 10139069 | 10138854 | ID=cds.MS.gene047665.t1;Parent=MS.gene047665.t1 |
| chr5.3 | exon | 10138553 | 10138744 | 10138553 | ID=MS.gene047665.t1.exon2;Parent=MS.gene047665.t1 |
| chr5.3 | CDS | 10138553 | 10138744 | 10138553 | ID=cds.MS.gene047665.t1;Parent=MS.gene047665.t1 |
| chr5.3 | exon | 10138224 | 10138386 | 10138224 | ID=MS.gene047665.t1.exon3;Parent=MS.gene047665.t1 |
| chr5.3 | CDS | 10138224 | 10138386 | 10138224 | ID=cds.MS.gene047665.t1;Parent=MS.gene047665.t1 |
| chr5.3 | exon | 10137606 | 10138015 | 10137606 | ID=MS.gene047665.t1.exon4;Parent=MS.gene047665.t1 |
| chr5.3 | CDS | 10137606 | 10138015 | 10137606 | ID=cds.MS.gene047665.t1;Parent=MS.gene047665.t1 |
| Gene Sequence |
| Protein sequence |
