Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54881.t1 | XP_013465197.1 | 99.1 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 1.50E-153 | 552.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54881.t1 | Q9MAH8 | 51.2 | 367 | 126 | 12 | 8 | 329 | 33 | 391 | 1.9e-48 | 194.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54881.t1 | G7ZVJ2 | 99.1 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 1.0e-153 | 552.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene54881.t1 | TF | TCP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene54881 | 0.844296 | 8.25E-59 | -1.69E-46 |
| MS.gene049171 | MS.gene54881 | 0.841918 | 3.55E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene54881 | 0.844088 | 9.39E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene54881 | 0.862748 | 4.07E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene54881 | 0.809943 | 1.47E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene54881 | 0.831116 | 2.00E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene54881 | 0.810534 | 1.10E-50 | -1.69E-46 |
| MS.gene04932 | MS.gene54881 | -0.818958 | 1.49E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene54881 | 0.828445 | 8.96E-55 | -1.69E-46 |
| MS.gene049488 | MS.gene54881 | 0.81174 | 6.02E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene54881 | 0.846423 | 2.19E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene54881 | 0.824012 | 1.02E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene54881 | 0.847169 | 1.37E-59 | -1.69E-46 |
| MS.gene050170 | MS.gene54881 | 0.836678 | 8.13E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene54881 | 0.826739 | 2.30E-54 | -1.69E-46 |
| MS.gene050327 | MS.gene54881 | -0.803887 | 2.81E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene54881 | 0.831541 | 1.57E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene54881 | 0.830897 | 2.27E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene54881 | 0.829313 | 5.52E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene54881 | 0.833911 | 4.06E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene54881 | 0.825 | 5.95E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene54881 | 0.815445 | 9.21E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene54881 | 0.859337 | 4.43E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene54881 | 0.836159 | 1.10E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene54881 | 0.836095 | 1.14E-56 | -1.69E-46 |
| MS.gene05081 | MS.gene54881 | 0.838775 | 2.35E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene54881 | 0.881043 | 3.33E-70 | -1.69E-46 |
| MS.gene050871 | MS.gene54881 | 0.883299 | 5.05E-71 | -1.69E-46 |
| MS.gene050950 | MS.gene54881 | 0.847192 | 1.35E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene54881 | -0.80438 | 2.22E-49 | -1.69E-46 |
| MS.gene051167 | MS.gene54881 | -0.807939 | 3.96E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene54881 | 0.806608 | 7.57E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene54881 | 0.856859 | 2.42E-62 | -1.69E-46 |
| MS.gene051694 | MS.gene54881 | 0.825444 | 4.67E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene54881 | 0.834875 | 2.33E-56 | -1.69E-46 |
| MS.gene051838 | MS.gene54881 | 0.874686 | 5.56E-68 | -1.69E-46 |
| MS.gene051858 | MS.gene54881 | 0.837183 | 6.04E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene54881 | 0.845553 | 3.78E-59 | -1.69E-46 |
| MS.gene051941 | MS.gene54881 | 0.803906 | 2.79E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene54881 | 0.872048 | 4.29E-67 | -1.69E-46 |
| MS.gene052318 | MS.gene54881 | 0.811551 | 6.62E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene54881 | 0.818736 | 1.68E-52 | -1.69E-46 |
| MS.gene05234 | MS.gene54881 | -0.811606 | 6.44E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene54881 | -0.80132 | 9.52E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene54881 | 0.82597 | 3.51E-54 | -1.69E-46 |
| MS.gene052421 | MS.gene54881 | 0.822774 | 1.98E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene54881 | 0.802536 | 5.36E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene54881 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene54881 | 0.800624 | 1.32E-48 | -1.69E-46 |
| MS.gene052486 | MS.gene54881 | 0.813067 | 3.09E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene54881 | 0.854307 | 1.34E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene54881 | 0.880299 | 6.15E-70 | -1.69E-46 |
| MS.gene052505 | MS.gene54881 | 0.847789 | 9.26E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene54881 | 0.829117 | 6.16E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene54881 | 0.839634 | 1.41E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene54881 | 0.827795 | 1.28E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene54881 | 0.877825 | 4.60E-69 | -1.69E-46 |
| MS.gene052825 | MS.gene54881 | 0.878407 | 2.88E-69 | -1.69E-46 |
| MS.gene052870 | MS.gene54881 | 0.830711 | 2.52E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene54881 | 0.841842 | 3.72E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene54881 | 0.81877 | 1.65E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene54881 | 0.809391 | 1.94E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene54881 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene053203 | MS.gene54881 | 0.841736 | 3.96E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene54881 | 0.819336 | 1.23E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene54881 | 0.81792 | 2.57E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene54881 | 0.811101 | 8.29E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene54881 | -0.816364 | 5.74E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene54881 | 0.808697 | 2.73E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene54881 | 0.817417 | 3.33E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene54881 | 0.832828 | 7.57E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene54881 | 0.857974 | 1.13E-62 | -1.69E-46 |
| MS.gene053574 | MS.gene54881 | 0.851708 | 7.44E-61 | -1.69E-46 |
| MS.gene053626 | MS.gene54881 | 0.840035 | 1.11E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene54881 | 0.861233 | 1.18E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene54881 | 0.8812 | 2.92E-70 | -1.69E-46 |
| MS.gene053912 | MS.gene54881 | 0.818895 | 1.54E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene54881 | 0.836312 | 1.01E-56 | -1.69E-46 |
| MS.gene054003 | MS.gene54881 | 0.882435 | 1.04E-70 | -1.69E-46 |
| MS.gene054408 | MS.gene54881 | 0.832556 | 8.84E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene54881 | 0.834947 | 2.23E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene54881 | 0.823357 | 1.45E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene54881 | 0.822706 | 2.05E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene54881 | -0.840197 | 1.01E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene54881 | 0.851322 | 9.57E-61 | -1.69E-46 |
| MS.gene054884 | MS.gene54881 | -0.813004 | 3.19E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene54881 | 0.832309 | 1.02E-55 | -1.69E-46 |
| MS.gene05494 | MS.gene54881 | 0.842278 | 2.85E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene54881 | 0.813211 | 2.87E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene54881 | 0.849092 | 4.04E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene54881 | 0.827356 | 1.64E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene54881 | 0.822023 | 2.96E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene54881 | 0.830304 | 3.17E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene54881 | 0.811719 | 6.08E-51 | -1.69E-46 |
| MS.gene055486 | MS.gene54881 | 0.828336 | 9.52E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene54881 | 0.846773 | 1.76E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene54881 | 0.876157 | 1.75E-68 | -1.69E-46 |
| MS.gene055722 | MS.gene54881 | 0.819404 | 1.18E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene54881 | 0.811848 | 5.70E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene54881 | 0.805543 | 1.27E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene54881 | 0.803642 | 3.16E-49 | -1.69E-46 |
| MS.gene055787 | MS.gene54881 | -0.810571 | 1.08E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene54881 | 0.844753 | 6.22E-59 | -1.69E-46 |
| MS.gene055909 | MS.gene54881 | 0.833084 | 6.53E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene54881 | 0.827937 | 1.19E-54 | -1.69E-46 |
| MS.gene055941 | MS.gene54881 | 0.873608 | 1.29E-67 | -1.69E-46 |
| MS.gene056046 | MS.gene54881 | 0.81662 | 5.04E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene54881 | 0.864162 | 1.48E-64 | -1.69E-46 |
| MS.gene056387 | MS.gene54881 | 0.861548 | 9.50E-64 | -1.69E-46 |
| MS.gene056448 | MS.gene54881 | 0.826735 | 2.30E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene54881 | 0.800361 | 1.49E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene54881 | 0.834588 | 2.75E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene54881 | 0.813726 | 2.21E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene54881 | 0.828856 | 7.12E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene54881 | 0.808746 | 2.66E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene54881 | 0.801685 | 8.01E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene54881 | 0.815981 | 7.00E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene54881 | 0.828846 | 7.16E-55 | -1.69E-46 |
| MS.gene056692 | MS.gene54881 | 0.806183 | 9.31E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene54881 | -0.807622 | 4.62E-50 | -1.69E-46 |
| MS.gene056946 | MS.gene54881 | 0.821661 | 3.59E-53 | -1.69E-46 |
| MS.gene057048 | MS.gene54881 | 0.830577 | 2.72E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene54881 | 0.860243 | 2.37E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene54881 | 0.838281 | 3.16E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene54881 | 0.804953 | 1.69E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene54881 | -0.807258 | 5.52E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene54881 | -0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene54881 | 0.824423 | 8.14E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene54881 | 0.853777 | 1.91E-61 | -1.69E-46 |
| MS.gene057734 | MS.gene54881 | 0.859688 | 3.48E-63 | -1.69E-46 |
| MS.gene057831 | MS.gene54881 | 0.815948 | 7.12E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene54881 | 0.889081 | 3.33E-73 | -1.69E-46 |
| MS.gene057857 | MS.gene54881 | 0.865513 | 5.59E-65 | -1.69E-46 |
| MS.gene05787 | MS.gene54881 | 0.83787 | 4.03E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene54881 | 0.839598 | 1.44E-57 | -1.69E-46 |
| MS.gene058130 | MS.gene54881 | 0.823845 | 1.11E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene54881 | 0.856579 | 2.92E-62 | -1.69E-46 |
| MS.gene058338 | MS.gene54881 | 0.833039 | 6.70E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene54881 | 0.840016 | 1.12E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene54881 | 0.843436 | 1.40E-58 | -1.69E-46 |
| MS.gene058419 | MS.gene54881 | 0.834219 | 3.40E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene54881 | 0.825397 | 4.79E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene54881 | 0.832492 | 9.17E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene54881 | 0.815813 | 7.63E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene54881 | 0.851902 | 6.56E-61 | -1.69E-46 |
| MS.gene059022 | MS.gene54881 | 0.807933 | 3.97E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene54881 | 0.878185 | 3.44E-69 | -1.69E-46 |
| MS.gene05913 | MS.gene54881 | 0.804705 | 1.90E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene54881 | 0.810138 | 1.34E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene54881 | -0.808442 | 3.09E-50 | -1.69E-46 |
| MS.gene059305 | MS.gene54881 | 0.804427 | 2.17E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene54881 | 0.846689 | 1.85E-59 | -1.69E-46 |
| MS.gene059367 | MS.gene54881 | 0.813553 | 2.41E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene54881 | 0.803999 | 2.67E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene54881 | 0.814478 | 1.51E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene54881 | 0.813823 | 2.11E-51 | -1.69E-46 |
| MS.gene059699 | MS.gene54881 | -0.808839 | 2.54E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene54881 | -0.813502 | 2.48E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene54881 | 0.845937 | 2.97E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene54881 | 0.822761 | 1.99E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene54881 | 0.821585 | 3.73E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene54881 | 0.833024 | 6.76E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene54881 | 0.804508 | 2.09E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene54881 | 0.822997 | 1.76E-53 | -1.69E-46 |
| MS.gene060087 | MS.gene54881 | -0.802511 | 5.42E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene54881 | 0.815586 | 8.57E-52 | -1.69E-46 |
| MS.gene060485 | MS.gene54881 | 0.815757 | 7.85E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene54881 | 0.801877 | 7.32E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene54881 | 0.858449 | 8.17E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene54881 | 0.82954 | 4.86E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene54881 | 0.825285 | 5.09E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene54881 | 0.812103 | 5.02E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene54881 | 0.817175 | 3.78E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene54881 | 0.836508 | 8.98E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene54881 | 0.84817 | 7.27E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene54881 | 0.816575 | 5.15E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene54881 | 0.838724 | 2.43E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene54881 | 0.801772 | 7.69E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene54881 | 0.809179 | 2.15E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54881.t1 | MTR_2g090960 | 99.088 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 0.0 | 674 |
| MS.gene54881.t1 | MTR_4g079580 | 54.303 | 337 | 113 | 12 | 3 | 314 | 1 | 321 | 1.82e-104 | 309 |
| MS.gene54881.t1 | MTR_8g463380 | 42.327 | 404 | 145 | 13 | 7 | 329 | 37 | 433 | 8.31e-79 | 247 |
| MS.gene54881.t1 | MTR_2g078200 | 38.235 | 340 | 138 | 10 | 7 | 326 | 3 | 290 | 2.00e-50 | 169 |
| MS.gene54881.t1 | MTR_7g015010 | 62.162 | 74 | 28 | 0 | 18 | 91 | 51 | 124 | 2.03e-24 | 102 |
| MS.gene54881.t1 | MTR_6g015350 | 58.824 | 85 | 27 | 2 | 3 | 87 | 33 | 109 | 3.11e-23 | 98.6 |
| MS.gene54881.t1 | MTR_4g109660 | 61.765 | 68 | 26 | 0 | 18 | 85 | 50 | 117 | 2.10e-21 | 92.8 |
| MS.gene54881.t1 | MTR_3g026050 | 58.824 | 68 | 28 | 0 | 18 | 85 | 51 | 118 | 5.90e-20 | 90.1 |
| MS.gene54881.t1 | MTR_6g017055 | 50.746 | 67 | 33 | 0 | 18 | 84 | 120 | 186 | 7.23e-17 | 81.3 |
| MS.gene54881.t1 | MTR_1g103380 | 53.333 | 60 | 28 | 0 | 23 | 82 | 200 | 259 | 2.63e-16 | 79.7 |
| MS.gene54881.t1 | MTR_7g018500 | 54.386 | 57 | 26 | 0 | 26 | 82 | 122 | 178 | 9.95e-15 | 74.7 |
| MS.gene54881.t1 | MTR_4g111935 | 49.206 | 63 | 32 | 0 | 20 | 82 | 128 | 190 | 2.53e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54881.t1 | AT3G15030 | 40.852 | 399 | 145 | 14 | 8 | 326 | 29 | 416 | 2.27e-74 | 235 |
| MS.gene54881.t1 | AT3G15030 | 40.852 | 399 | 145 | 14 | 8 | 326 | 29 | 416 | 2.27e-74 | 235 |
| MS.gene54881.t1 | AT3G15030 | 40.852 | 399 | 145 | 14 | 8 | 326 | 29 | 416 | 2.27e-74 | 235 |
| MS.gene54881.t1 | AT3G15030 | 40.852 | 399 | 145 | 14 | 8 | 326 | 29 | 416 | 2.27e-74 | 235 |
| MS.gene54881.t1 | AT1G53230 | 44.022 | 368 | 151 | 13 | 8 | 329 | 33 | 391 | 2.54e-69 | 221 |
| MS.gene54881.t1 | AT1G53230 | 44.022 | 368 | 151 | 13 | 8 | 329 | 33 | 391 | 2.54e-69 | 221 |
| MS.gene54881.t1 | AT2G31070 | 47.410 | 251 | 82 | 12 | 1 | 228 | 1 | 224 | 1.16e-53 | 180 |
| MS.gene54881.t1 | AT4G18390 | 57.447 | 94 | 33 | 1 | 18 | 111 | 36 | 122 | 3.35e-27 | 110 |
| MS.gene54881.t1 | AT4G18390 | 57.447 | 94 | 33 | 1 | 18 | 111 | 36 | 122 | 3.35e-27 | 110 |
| MS.gene54881.t1 | AT3G02150 | 61.905 | 84 | 27 | 1 | 3 | 86 | 58 | 136 | 2.64e-24 | 100 |
| MS.gene54881.t1 | AT3G02150 | 61.905 | 84 | 27 | 1 | 3 | 86 | 58 | 136 | 4.16e-24 | 101 |
| MS.gene54881.t1 | AT1G30210 | 66.176 | 68 | 23 | 0 | 18 | 85 | 44 | 111 | 7.62e-23 | 97.4 |
| MS.gene54881.t1 | AT1G30210 | 66.176 | 68 | 23 | 0 | 18 | 85 | 44 | 111 | 7.62e-23 | 97.4 |
| MS.gene54881.t1 | AT5G60970 | 60.000 | 70 | 25 | 1 | 18 | 87 | 57 | 123 | 4.69e-21 | 92.8 |
| MS.gene54881.t1 | AT5G08070 | 58.333 | 72 | 28 | 1 | 18 | 87 | 27 | 98 | 7.32e-21 | 90.1 |
| MS.gene54881.t1 | AT5G08070 | 58.333 | 72 | 28 | 1 | 18 | 87 | 27 | 98 | 7.32e-21 | 90.1 |
| MS.gene54881.t1 | AT1G68800 | 40.659 | 91 | 54 | 0 | 20 | 110 | 108 | 198 | 2.13e-18 | 85.5 |
| MS.gene54881.t1 | AT1G68800 | 40.659 | 91 | 54 | 0 | 20 | 110 | 108 | 198 | 2.54e-18 | 85.1 |
| MS.gene54881.t1 | AT1G67260 | 54.545 | 66 | 30 | 0 | 19 | 84 | 82 | 147 | 3.38e-18 | 84.7 |
| MS.gene54881.t1 | AT1G67260 | 54.545 | 66 | 30 | 0 | 19 | 84 | 82 | 147 | 3.38e-18 | 84.7 |
| MS.gene54881.t1 | AT1G67260 | 54.545 | 66 | 30 | 0 | 19 | 84 | 82 | 147 | 4.10e-18 | 84.3 |
| MS.gene54881.t1 | AT3G18550 | 50.794 | 63 | 31 | 0 | 20 | 82 | 144 | 206 | 2.93e-14 | 73.6 |
| MS.gene54881.t1 | AT3G18550 | 50.000 | 64 | 32 | 0 | 19 | 82 | 143 | 206 | 3.02e-14 | 73.6 |
| MS.gene54881.t1 | AT3G18550 | 50.000 | 64 | 32 | 0 | 19 | 82 | 143 | 206 | 3.03e-14 | 73.6 |
| MS.gene54881.t1 | AT3G18550 | 50.000 | 64 | 32 | 0 | 19 | 82 | 143 | 206 | 3.03e-14 | 73.6 |
Find 70 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAATAGAACCGGGTTTA+TGG | 0.199355 | 2.1:+10011908 | MS.gene54881:CDS |
| GTTAATTCGCCTACGTTTCT+AGG | 0.206516 | 2.1:+10011930 | MS.gene54881:CDS |
| TGTAACTCTTCTGTTGCATT+TGG | 0.281307 | 2.1:-10011510 | None:intergenic |
| ATTCCCCAAGCTTCTATCTT+TGG | 0.299538 | 2.1:+10012083 | MS.gene54881:CDS |
| TCTTCTGTTGCATTTGGAAT+TGG | 0.308776 | 2.1:-10011504 | None:intergenic |
| CACCATAACCATAACCATTC+AGG | 0.316779 | 2.1:+10011633 | MS.gene54881:CDS |
| TGTATTCCTGCTAGAATTCA+AGG | 0.342553 | 2.1:+10012140 | MS.gene54881:CDS |
| GATTTGATGCTAATTATAAC+AGG | 0.345674 | 2.1:+10011862 | MS.gene54881:CDS |
| TGTTGATTGGCTCATCAAAA+AGG | 0.366611 | 2.1:+10011437 | MS.gene54881:CDS |
| ATTATAACAGGATTGTGAAT+TGG | 0.376707 | 2.1:+10011874 | MS.gene54881:CDS |
| TTCAAGGAGGCCACATTGTA+AGG | 0.379947 | 2.1:+10011274 | MS.gene54881:CDS |
| GAATGAAACCTGAATGGTTA+TGG | 0.404262 | 2.1:-10011641 | None:intergenic |
| GCAGAACAATCAGAATCTTC+TGG | 0.415389 | 2.1:+10011588 | MS.gene54881:CDS |
| AAGCTTCTATCTTTGGTAGC+AGG | 0.417259 | 2.1:+10012090 | MS.gene54881:CDS |
| TGCAGTAGAAACAAATGAAA+TGG | 0.417940 | 2.1:+10011557 | MS.gene54881:CDS |
| AGAAGAAGAGGATGGCCTTT+CGG | 0.418415 | 2.1:-10012189 | None:intergenic |
| AACAACTCAACACAGGATCT+TGG | 0.421186 | 2.1:+10011765 | MS.gene54881:CDS |
| TAATTAGCATCAAATCCAAC+AGG | 0.428411 | 2.1:-10011855 | None:intergenic |
| GCTACCAAAGATAGAAGCTT+GGG | 0.431520 | 2.1:-10012087 | None:intergenic |
| GGCCACATTGTAAGGGCAAC+AGG | 0.434632 | 2.1:+10011282 | MS.gene54881:CDS |
| GATTCACCAACAGAAGTTGT+TGG | 0.436409 | 2.1:-10011699 | None:intergenic |
| ACAGCTGATATGAATAGAAC+CGG | 0.440232 | 2.1:+10011900 | MS.gene54881:CDS |
| CATTTGAAGCTGAATTGTCT+TGG | 0.440619 | 2.1:-10011806 | None:intergenic |
| TTTCTGTCTGATGCTTTGAC+AGG | 0.443796 | 2.1:+10012113 | MS.gene54881:CDS |
| TCCACCGAGGCATCGGCAAT+TGG | 0.446878 | 2.1:-10012032 | None:intergenic |
| TTTCACCATCACTCCGTCCT+TGG | 0.447022 | 2.1:+10012000 | MS.gene54881:CDS |
| TAGAAAAGACAGACATAGTA+AGG | 0.449768 | 2.1:+10011305 | MS.gene54881:CDS |
| GTGATGAGAATTAGAAGAAG+AGG | 0.465335 | 2.1:-10012201 | None:intergenic |
| AACCTGAATGGTTATGGTTA+TGG | 0.467860 | 2.1:-10011635 | None:intergenic |
| GGAGAAATAGTTCAAGTTCA+AGG | 0.475915 | 2.1:+10011258 | MS.gene54881:CDS |
| GCATTTGGAATTGGATTCCA+TGG | 0.487862 | 2.1:-10011495 | None:intergenic |
| GACCGAGTAAAGCTGTTGAT+TGG | 0.496508 | 2.1:+10011424 | MS.gene54881:CDS |
| TTCTCTGGATCAAACCCTGT+TGG | 0.497035 | 2.1:+10011840 | MS.gene54881:CDS |
| TCGCCTACGTTTCTAGGCCA+AGG | 0.497569 | 2.1:+10011936 | MS.gene54881:CDS |
| TGCTACCAAAGATAGAAGCT+TGG | 0.514624 | 2.1:-10012088 | None:intergenic |
| TACGTTTCTAGGCCAAGGTT+CGG | 0.519680 | 2.1:+10011941 | MS.gene54881:CDS |
| TCCTCACCTTGAATTCTAGC+AGG | 0.529084 | 2.1:-10012146 | None:intergenic |
| ATGATGATCCACCGAGGCAT+CGG | 0.529513 | 2.1:-10012039 | None:intergenic |
| TATGATGTTCAAGACCGTCT+TGG | 0.530862 | 2.1:+10011393 | MS.gene54881:CDS |
| TTGATTGAATGAAACCTGAA+TGG | 0.548923 | 2.1:-10011647 | None:intergenic |
| GCCTTTCGGAACCAACTCCA+TGG | 0.555596 | 2.1:-10012175 | None:intergenic |
| AGCCAATCAACAGCTTTACT+CGG | 0.566559 | 2.1:-10011426 | None:intergenic |
| TATTCCAATTGCCGATGCCT+CGG | 0.573796 | 2.1:+10012028 | MS.gene54881:CDS |
| TCATTCCAAGGACGGAGTGA+TGG | 0.590778 | 2.1:-10012005 | None:intergenic |
| TCGGTCTGTCGTAGCCAAGA+CGG | 0.592319 | 2.1:-10011407 | None:intergenic |
| GAGGATGAGAGCCATGGAGT+TGG | 0.593361 | 2.1:+10012164 | MS.gene54881:CDS |
| TTAATGGGAATGAAGAGCAC+AGG | 0.595991 | 2.1:+10011234 | None:intergenic |
| TGCAACAGAAGAGTTACAAG+AGG | 0.599540 | 2.1:+10011515 | MS.gene54881:CDS |
| GCAATTGGAATATCATTCCA+AGG | 0.606871 | 2.1:-10012017 | None:intergenic |
| TCAAGGAGGCCACATTGTAA+GGG | 0.607094 | 2.1:+10011275 | MS.gene54881:CDS |
| TACCTGTTGCCCTTACAATG+TGG | 0.607186 | 2.1:-10011284 | None:intergenic |
| GCCATGGAGTTGGTTCCGAA+AGG | 0.607349 | 2.1:+10012174 | MS.gene54881:CDS |
| TCCAATTGCCGATGCCTCGG+TGG | 0.612323 | 2.1:+10012031 | MS.gene54881:CDS |
| ATGGGAATGAAGAGCACAGG+AGG | 0.615936 | 2.1:+10011237 | MS.gene54881:CDS |
| AATCGAACACGTCGATCACG+AGG | 0.616513 | 2.1:-10011345 | None:intergenic |
| TTGGAATATCATTCCAAGGA+CGG | 0.624073 | 2.1:-10012013 | None:intergenic |
| AGTAAGGTATACACTGCGAA+AGG | 0.629171 | 2.1:+10011321 | MS.gene54881:CDS |
| CAAGGTGAGGATGAGAGCCA+TGG | 0.637843 | 2.1:+10012158 | MS.gene54881:CDS |
| TCCTGCTAGAATTCAAGGTG+AGG | 0.647750 | 2.1:+10012145 | MS.gene54881:CDS |
| CAGCTGATATGAATAGAACC+GGG | 0.655461 | 2.1:+10011901 | MS.gene54881:CDS |
| AAGAACAAACAACTCAACAC+AGG | 0.662739 | 2.1:+10011758 | MS.gene54881:CDS |
| AATTAGCATCAAATCCAACA+GGG | 0.667862 | 2.1:-10011854 | None:intergenic |
| TGAGAATTAGAAGAAGAGGA+TGG | 0.669324 | 2.1:-10012197 | None:intergenic |
| CTACCAAAGATAGAAGCTTG+GGG | 0.680977 | 2.1:-10012086 | None:intergenic |
| AACTTGATCAGCTTCCACCA+TGG | 0.681586 | 2.1:+10011478 | MS.gene54881:CDS |
| GAACCTTGGCCTAGAAACGT+AGG | 0.688833 | 2.1:-10011939 | None:intergenic |
| AGGCGAATTAACCATAAACC+CGG | 0.693859 | 2.1:-10011919 | None:intergenic |
| TTTGGAATTGGATTCCATGG+TGG | 0.696350 | 2.1:-10011492 | None:intergenic |
| GAAATAGTTCAAGTTCAAGG+AGG | 0.712935 | 2.1:+10011261 | MS.gene54881:CDS |
| GTGATTATGATGATCCACCG+AGG | 0.797740 | 2.1:-10012045 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATTATAACAGGATTGTGAAT+TGG | + | chr2.1:10011874-10011893 | MS.gene54881:CDS | 25.0% |
| ! | GATTTGATGCTAATTATAAC+AGG | + | chr2.1:10011862-10011881 | MS.gene54881:CDS | 25.0% |
| AATTAGCATCAAATCCAACA+GGG | - | chr2.1:10011857-10011876 | None:intergenic | 30.0% | |
| TAATTAGCATCAAATCCAAC+AGG | - | chr2.1:10011858-10011877 | None:intergenic | 30.0% | |
| TAGAAAAGACAGACATAGTA+AGG | + | chr2.1:10011305-10011324 | MS.gene54881:CDS | 30.0% | |
| TGCAGTAGAAACAAATGAAA+TGG | + | chr2.1:10011557-10011576 | MS.gene54881:CDS | 30.0% | |
| TTGATTGAATGAAACCTGAA+TGG | - | chr2.1:10011650-10011669 | None:intergenic | 30.0% | |
| ! | AATGATCAAACACTTTTCTC+TGG | + | chr2.1:10011825-10011844 | MS.gene54881:CDS | 30.0% |
| !!! | TTTTTTCCAACAACTTCTGT+TGG | + | chr2.1:10011693-10011712 | MS.gene54881:CDS | 30.0% |
| AACCTGAATGGTTATGGTTA+TGG | - | chr2.1:10011638-10011657 | None:intergenic | 35.0% | |
| AAGAACAAACAACTCAACAC+AGG | + | chr2.1:10011758-10011777 | MS.gene54881:CDS | 35.0% | |
| ACAGCTGATATGAATAGAAC+CGG | + | chr2.1:10011900-10011919 | MS.gene54881:CDS | 35.0% | |
| GAATGAAACCTGAATGGTTA+TGG | - | chr2.1:10011644-10011663 | None:intergenic | 35.0% | |
| GCAATTGGAATATCATTCCA+AGG | - | chr2.1:10012020-10012039 | None:intergenic | 35.0% | |
| GTGATGAGAATTAGAAGAAG+AGG | - | chr2.1:10012204-10012223 | None:intergenic | 35.0% | |
| TATGAATAGAACCGGGTTTA+TGG | + | chr2.1:10011908-10011927 | MS.gene54881:CDS | 35.0% | |
| TGAGAATTAGAAGAAGAGGA+TGG | - | chr2.1:10012200-10012219 | None:intergenic | 35.0% | |
| TGTAACTCTTCTGTTGCATT+TGG | - | chr2.1:10011513-10011532 | None:intergenic | 35.0% | |
| TGTATTCCTGCTAGAATTCA+AGG | + | chr2.1:10012140-10012159 | MS.gene54881:CDS | 35.0% | |
| TTGGAATATCATTCCAAGGA+CGG | - | chr2.1:10012016-10012035 | None:intergenic | 35.0% | |
| ! | CATTTGAAGCTGAATTGTCT+TGG | - | chr2.1:10011809-10011828 | None:intergenic | 35.0% |
| ! | GAAATAGTTCAAGTTCAAGG+AGG | + | chr2.1:10011261-10011280 | MS.gene54881:CDS | 35.0% |
| ! | GGAGAAATAGTTCAAGTTCA+AGG | + | chr2.1:10011258-10011277 | MS.gene54881:CDS | 35.0% |
| ! | TCTTCTGTTGCATTTGGAAT+TGG | - | chr2.1:10011507-10011526 | None:intergenic | 35.0% |
| ! | TGTTGATTGGCTCATCAAAA+AGG | + | chr2.1:10011437-10011456 | MS.gene54881:CDS | 35.0% |
| AACAACTCAACACAGGATCT+TGG | + | chr2.1:10011765-10011784 | MS.gene54881:CDS | 40.0% | |
| AGCCAATCAACAGCTTTACT+CGG | - | chr2.1:10011429-10011448 | None:intergenic | 40.0% | |
| AGGCGAATTAACCATAAACC+CGG | - | chr2.1:10011922-10011941 | None:intergenic | 40.0% | |
| AGTAAGGTATACACTGCGAA+AGG | + | chr2.1:10011321-10011340 | MS.gene54881:CDS | 40.0% | |
| ATGGTGAAAAACTGGACTGA+AGG | - | chr2.1:10011989-10012008 | None:intergenic | 40.0% | |
| ATTCCCCAAGCTTCTATCTT+TGG | + | chr2.1:10012083-10012102 | MS.gene54881:CDS | 40.0% | |
| CACCATAACCATAACCATTC+AGG | + | chr2.1:10011633-10011652 | MS.gene54881:CDS | 40.0% | |
| CAGCTGATATGAATAGAACC+GGG | + | chr2.1:10011901-10011920 | MS.gene54881:CDS | 40.0% | |
| CTACCAAAGATAGAAGCTTG+GGG | - | chr2.1:10012089-10012108 | None:intergenic | 40.0% | |
| GATTCACCAACAGAAGTTGT+TGG | - | chr2.1:10011702-10011721 | None:intergenic | 40.0% | |
| GCAGAACAATCAGAATCTTC+TGG | + | chr2.1:10011588-10011607 | MS.gene54881:CDS | 40.0% | |
| GCTACCAAAGATAGAAGCTT+GGG | - | chr2.1:10012090-10012109 | None:intergenic | 40.0% | |
| GTTAATTCGCCTACGTTTCT+AGG | + | chr2.1:10011930-10011949 | MS.gene54881:CDS | 40.0% | |
| TATGATGTTCAAGACCGTCT+TGG | + | chr2.1:10011393-10011412 | MS.gene54881:CDS | 40.0% | |
| TGCAACAGAAGAGTTACAAG+AGG | + | chr2.1:10011515-10011534 | MS.gene54881:CDS | 40.0% | |
| TGCTACCAAAGATAGAAGCT+TGG | - | chr2.1:10012091-10012110 | None:intergenic | 40.0% | |
| TGGTGAAAAACTGGACTGAA+GGG | - | chr2.1:10011988-10012007 | None:intergenic | 40.0% | |
| TTTCTGTCTGATGCTTTGAC+AGG | + | chr2.1:10012113-10012132 | MS.gene54881:CDS | 40.0% | |
| ! | AAGCTTCTATCTTTGGTAGC+AGG | + | chr2.1:10012090-10012109 | MS.gene54881:CDS | 40.0% |
| ! | GCATTTGGAATTGGATTCCA+TGG | - | chr2.1:10011498-10011517 | None:intergenic | 40.0% |
| ! | TTTGGAATTGGATTCCATGG+TGG | - | chr2.1:10011495-10011514 | None:intergenic | 40.0% |
| AACTTGATCAGCTTCCACCA+TGG | + | chr2.1:10011478-10011497 | MS.gene54881:CDS | 45.0% | |
| AGAAGAAGAGGATGGCCTTT+CGG | - | chr2.1:10012192-10012211 | None:intergenic | 45.0% | |
| GACCGAGTAAAGCTGTTGAT+TGG | + | chr2.1:10011424-10011443 | MS.gene54881:CDS | 45.0% | |
| GTGATTATGATGATCCACCG+AGG | - | chr2.1:10012048-10012067 | None:intergenic | 45.0% | |
| TACCTGTTGCCCTTACAATG+TGG | - | chr2.1:10011287-10011306 | None:intergenic | 45.0% | |
| TATTCCAATTGCCGATGCCT+CGG | + | chr2.1:10012028-10012047 | MS.gene54881:CDS | 45.0% | |
| TCAAGGAGGCCACATTGTAA+GGG | + | chr2.1:10011275-10011294 | MS.gene54881:CDS | 45.0% | |
| TCCTCACCTTGAATTCTAGC+AGG | - | chr2.1:10012149-10012168 | None:intergenic | 45.0% | |
| TCCTGCTAGAATTCAAGGTG+AGG | + | chr2.1:10012145-10012164 | MS.gene54881:CDS | 45.0% | |
| TTCAAGGAGGCCACATTGTA+AGG | + | chr2.1:10011274-10011293 | MS.gene54881:CDS | 45.0% | |
| TTCTCTGGATCAAACCCTGT+TGG | + | chr2.1:10011840-10011859 | MS.gene54881:CDS | 45.0% | |
| ! | ACGGAGTGATGGTGAAAAAC+TGG | - | chr2.1:10011997-10012016 | None:intergenic | 45.0% |
| ! | TACGTTTCTAGGCCAAGGTT+CGG | + | chr2.1:10011941-10011960 | MS.gene54881:CDS | 45.0% |
| AATCGAACACGTCGATCACG+AGG | - | chr2.1:10011348-10011367 | None:intergenic | 50.0% | |
| ATGATGATCCACCGAGGCAT+CGG | - | chr2.1:10012042-10012061 | None:intergenic | 50.0% | |
| GAACCTTGGCCTAGAAACGT+AGG | - | chr2.1:10011942-10011961 | None:intergenic | 50.0% | |
| TCATTCCAAGGACGGAGTGA+TGG | - | chr2.1:10012008-10012027 | None:intergenic | 50.0% | |
| TTTCACCATCACTCCGTCCT+TGG | + | chr2.1:10012000-10012019 | MS.gene54881:CDS | 50.0% | |
| ! | ATGGGAATGAAGAGCACAGG+AGG | + | chr2.1:10011237-10011256 | MS.gene54881:CDS | 50.0% |
| !! | TTCGGCTTTTTCCGCCCATA+GGG | + | chr2.1:10011959-10011978 | MS.gene54881:CDS | 50.0% |
| CAAGGTGAGGATGAGAGCCA+TGG | + | chr2.1:10012158-10012177 | MS.gene54881:CDS | 55.0% | |
| GAGGATGAGAGCCATGGAGT+TGG | + | chr2.1:10012164-10012183 | MS.gene54881:CDS | 55.0% | |
| GCCTTTCGGAACCAACTCCA+TGG | - | chr2.1:10012178-10012197 | None:intergenic | 55.0% | |
| GGCCACATTGTAAGGGCAAC+AGG | + | chr2.1:10011282-10011301 | MS.gene54881:CDS | 55.0% | |
| TCGGTCTGTCGTAGCCAAGA+CGG | - | chr2.1:10011410-10011429 | None:intergenic | 55.0% | |
| ! | GCCATGGAGTTGGTTCCGAA+AGG | + | chr2.1:10012174-10012193 | MS.gene54881:CDS | 55.0% |
| ! | TCGCCTACGTTTCTAGGCCA+AGG | + | chr2.1:10011936-10011955 | MS.gene54881:CDS | 55.0% |
| !! | GTTCGGCTTTTTCCGCCCAT+AGG | + | chr2.1:10011958-10011977 | MS.gene54881:CDS | 55.0% |
| !! | TCGGCTTTTTCCGCCCATAG+GGG | + | chr2.1:10011960-10011979 | MS.gene54881:CDS | 55.0% |
| GGACTGAAGGGTCCCCCTAT+GGG | - | chr2.1:10011976-10011995 | None:intergenic | 60.0% | |
| GGGCGGAAAAAGCCGAACCT+TGG | - | chr2.1:10011956-10011975 | None:intergenic | 60.0% | |
| TCCAATTGCCGATGCCTCGG+TGG | + | chr2.1:10012031-10012050 | MS.gene54881:CDS | 60.0% | |
| TGGACTGAAGGGTCCCCCTA+TGG | - | chr2.1:10011977-10011996 | None:intergenic | 60.0% | |
| !! | CGGCTTTTTCCGCCCATAGG+GGG | + | chr2.1:10011961-10011980 | MS.gene54881:CDS | 60.0% |
| !! | TCCACCGAGGCATCGGCAAT+TGG | - | chr2.1:10012035-10012054 | None:intergenic | 60.0% |
| CTGAAGGGTCCCCCTATGGG+CGG | - | chr2.1:10011973-10011992 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 10011237 | 10012226 | 10011237 | ID=MS.gene54881 |
| chr2.1 | mRNA | 10011237 | 10012226 | 10011237 | ID=MS.gene54881.t1;Parent=MS.gene54881 |
| chr2.1 | exon | 10011237 | 10012226 | 10011237 | ID=MS.gene54881.t1.exon1;Parent=MS.gene54881.t1 |
| chr2.1 | CDS | 10011237 | 10012226 | 10011237 | ID=cds.MS.gene54881.t1;Parent=MS.gene54881.t1 |
| Gene Sequence |
| Protein sequence |
