Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44639.t1 | XP_003621492.1 | 91.2 | 216 | 19 | 0 | 1 | 216 | 177 | 392 | 3.70E-113 | 417.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44639.t1 | Q940Z5 | 32.2 | 211 | 132 | 5 | 2 | 210 | 180 | 381 | 5.5e-25 | 115.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44639.t1 | F4ZG53 | 91.2 | 216 | 19 | 0 | 1 | 216 | 177 | 392 | 2.7e-113 | 417.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene44639 | 0.826036 | 3.38E-54 | -1.69E-46 |
MS.gene049171 | MS.gene44639 | 0.85946 | 4.07E-63 | -1.69E-46 |
MS.gene049217 | MS.gene44639 | 0.816423 | 5.57E-52 | -1.69E-46 |
MS.gene049222 | MS.gene44639 | 0.859868 | 3.07E-63 | -1.69E-46 |
MS.gene049232 | MS.gene44639 | 0.832746 | 7.93E-56 | -1.69E-46 |
MS.gene049285 | MS.gene44639 | 0.837202 | 5.98E-57 | -1.69E-46 |
MS.gene049320 | MS.gene44639 | 0.839346 | 1.67E-57 | -1.69E-46 |
MS.gene049396 | MS.gene44639 | 0.827066 | 1.92E-54 | -1.69E-46 |
MS.gene049609 | MS.gene44639 | 0.870965 | 9.79E-67 | -1.69E-46 |
MS.gene049633 | MS.gene44639 | 0.851056 | 1.14E-60 | -1.69E-46 |
MS.gene049656 | MS.gene44639 | 0.814112 | 1.82E-51 | -1.69E-46 |
MS.gene049657 | MS.gene44639 | 0.808427 | 3.11E-50 | -1.69E-46 |
MS.gene049805 | MS.gene44639 | 0.825976 | 3.49E-54 | -1.69E-46 |
MS.gene049865 | MS.gene44639 | 0.807386 | 5.18E-50 | -1.69E-46 |
MS.gene05010 | MS.gene44639 | 0.831786 | 1.37E-55 | -1.69E-46 |
MS.gene050170 | MS.gene44639 | 0.896392 | 3.86E-76 | -1.69E-46 |
MS.gene050323 | MS.gene44639 | 0.884287 | 2.18E-71 | -1.69E-46 |
MS.gene050381 | MS.gene44639 | -0.807053 | 6.10E-50 | -1.69E-46 |
MS.gene050496 | MS.gene44639 | 0.845473 | 3.97E-59 | -1.69E-46 |
MS.gene050499 | MS.gene44639 | 0.806892 | 6.60E-50 | -1.69E-46 |
MS.gene050502 | MS.gene44639 | 0.830583 | 2.71E-55 | -1.69E-46 |
MS.gene050504 | MS.gene44639 | 0.841894 | 3.60E-58 | -1.69E-46 |
MS.gene050538 | MS.gene44639 | 0.815047 | 1.13E-51 | -1.69E-46 |
MS.gene050577 | MS.gene44639 | 0.841053 | 6.00E-58 | -1.69E-46 |
MS.gene050593 | MS.gene44639 | 0.807936 | 3.96E-50 | -1.69E-46 |
MS.gene050612 | MS.gene44639 | 0.813615 | 2.34E-51 | -1.69E-46 |
MS.gene050675 | MS.gene44639 | 0.808478 | 3.04E-50 | -1.69E-46 |
MS.gene050697 | MS.gene44639 | 0.813853 | 2.07E-51 | -1.69E-46 |
MS.gene050699 | MS.gene44639 | 0.826881 | 2.13E-54 | -1.69E-46 |
MS.gene050747 | MS.gene44639 | 0.871928 | 4.70E-67 | -1.69E-46 |
MS.gene050772 | MS.gene44639 | 0.875799 | 2.32E-68 | -1.69E-46 |
MS.gene05080 | MS.gene44639 | 0.834227 | 3.39E-56 | -1.69E-46 |
MS.gene05081 | MS.gene44639 | 0.841245 | 5.34E-58 | -1.69E-46 |
MS.gene050868 | MS.gene44639 | 0.875241 | 3.60E-68 | -1.69E-46 |
MS.gene050871 | MS.gene44639 | 0.875501 | 2.93E-68 | -1.69E-46 |
MS.gene050904 | MS.gene44639 | 0.813246 | 2.82E-51 | -1.69E-46 |
MS.gene050950 | MS.gene44639 | 0.866016 | 3.88E-65 | -1.69E-46 |
MS.gene050986 | MS.gene44639 | 0.807619 | 4.63E-50 | -1.69E-46 |
MS.gene051167 | MS.gene44639 | -0.810916 | 9.09E-51 | -1.69E-46 |
MS.gene051268 | MS.gene44639 | 0.825634 | 4.21E-54 | -1.69E-46 |
MS.gene051438 | MS.gene44639 | 0.829602 | 4.70E-55 | -1.69E-46 |
MS.gene051551 | MS.gene44639 | 0.817854 | 2.66E-52 | -1.69E-46 |
MS.gene051694 | MS.gene44639 | 0.800583 | 1.35E-48 | -1.69E-46 |
MS.gene051838 | MS.gene44639 | 0.884175 | 2.40E-71 | -1.69E-46 |
MS.gene051858 | MS.gene44639 | 0.831382 | 1.72E-55 | -1.69E-46 |
MS.gene051874 | MS.gene44639 | 0.837399 | 5.32E-57 | -1.69E-46 |
MS.gene051941 | MS.gene44639 | 0.831445 | 1.66E-55 | -1.69E-46 |
MS.gene052164 | MS.gene44639 | 0.875515 | 2.90E-68 | -1.69E-46 |
MS.gene052318 | MS.gene44639 | 0.828393 | 9.22E-55 | -1.69E-46 |
MS.gene052346 | MS.gene44639 | 0.845891 | 3.06E-59 | -1.69E-46 |
MS.gene052414 | MS.gene44639 | 0.830668 | 2.58E-55 | -1.69E-46 |
MS.gene052421 | MS.gene44639 | 0.808749 | 2.66E-50 | -1.69E-46 |
MS.gene052482 | MS.gene44639 | 0.847868 | 8.81E-60 | -1.69E-46 |
MS.gene052486 | MS.gene44639 | 0.862126 | 6.32E-64 | -1.69E-46 |
MS.gene052501 | MS.gene44639 | 0.839418 | 1.60E-57 | -1.69E-46 |
MS.gene052503 | MS.gene44639 | 0.885406 | 8.36E-72 | -1.69E-46 |
MS.gene052504 | MS.gene44639 | 0.801692 | 7.99E-49 | -1.69E-46 |
MS.gene052505 | MS.gene44639 | 0.831119 | 2.00E-55 | -1.69E-46 |
MS.gene052506 | MS.gene44639 | 0.841991 | 3.40E-58 | -1.69E-46 |
MS.gene052615 | MS.gene44639 | 0.849665 | 2.79E-60 | -1.69E-46 |
MS.gene052822 | MS.gene44639 | 0.845753 | 3.34E-59 | -1.69E-46 |
MS.gene052823 | MS.gene44639 | 0.882803 | 7.67E-71 | -1.69E-46 |
MS.gene052825 | MS.gene44639 | 0.88256 | 9.41E-71 | -1.69E-46 |
MS.gene052870 | MS.gene44639 | 0.80763 | 4.60E-50 | -1.69E-46 |
MS.gene052872 | MS.gene44639 | 0.823013 | 1.74E-53 | -1.69E-46 |
MS.gene052916 | MS.gene44639 | 0.80492 | 1.71E-49 | -1.69E-46 |
MS.gene052966 | MS.gene44639 | 0.853642 | 2.09E-61 | -1.69E-46 |
MS.gene052982 | MS.gene44639 | 0.814895 | 1.22E-51 | -1.69E-46 |
MS.gene052986 | MS.gene44639 | 0.804888 | 1.74E-49 | -1.69E-46 |
MS.gene052987 | MS.gene44639 | 0.811886 | 5.59E-51 | -1.69E-46 |
MS.gene053117 | MS.gene44639 | 0.812826 | 3.49E-51 | -1.69E-46 |
MS.gene053203 | MS.gene44639 | 0.871127 | 8.66E-67 | -1.69E-46 |
MS.gene053207 | MS.gene44639 | 0.81351 | 2.47E-51 | -1.69E-46 |
MS.gene053213 | MS.gene44639 | 0.848324 | 6.59E-60 | -1.69E-46 |
MS.gene053286 | MS.gene44639 | 0.84245 | 2.57E-58 | -1.69E-46 |
MS.gene053420 | MS.gene44639 | -0.833791 | 4.35E-56 | -1.69E-46 |
MS.gene053421 | MS.gene44639 | -0.834877 | 2.32E-56 | -1.69E-46 |
MS.gene053436 | MS.gene44639 | 0.852435 | 4.63E-61 | -1.69E-46 |
MS.gene053449 | MS.gene44639 | 0.809877 | 1.52E-50 | -1.69E-46 |
MS.gene053479 | MS.gene44639 | 0.859805 | 3.21E-63 | -1.69E-46 |
MS.gene053480 | MS.gene44639 | 0.890095 | 1.34E-73 | -1.69E-46 |
MS.gene053505 | MS.gene44639 | 0.819013 | 1.45E-52 | -1.69E-46 |
MS.gene053574 | MS.gene44639 | 0.883222 | 5.39E-71 | -1.69E-46 |
MS.gene053626 | MS.gene44639 | 0.852591 | 4.18E-61 | -1.69E-46 |
MS.gene053632 | MS.gene44639 | 0.824464 | 7.96E-54 | -1.69E-46 |
MS.gene053633 | MS.gene44639 | 0.815982 | 6.99E-52 | -1.69E-46 |
MS.gene053824 | MS.gene44639 | 0.896959 | 2.23E-76 | -1.69E-46 |
MS.gene053912 | MS.gene44639 | 0.810913 | 9.10E-51 | -1.69E-46 |
MS.gene053916 | MS.gene44639 | 0.825219 | 5.28E-54 | -1.69E-46 |
MS.gene054003 | MS.gene44639 | 0.847792 | 9.24E-60 | -1.69E-46 |
MS.gene054270 | MS.gene44639 | -0.804466 | 2.13E-49 | -1.69E-46 |
MS.gene054408 | MS.gene44639 | 0.85718 | 1.95E-62 | -1.69E-46 |
MS.gene054595 | MS.gene44639 | 0.849263 | 3.62E-60 | -1.69E-46 |
MS.gene054600 | MS.gene44639 | 0.829902 | 3.97E-55 | -1.69E-46 |
MS.gene054642 | MS.gene44639 | 0.810858 | 9.35E-51 | -1.69E-46 |
MS.gene054706 | MS.gene44639 | -0.849179 | 3.82E-60 | -1.69E-46 |
MS.gene054707 | MS.gene44639 | -0.825356 | 4.90E-54 | -1.69E-46 |
MS.gene05470 | MS.gene44639 | 0.85302 | 3.15E-61 | -1.69E-46 |
MS.gene054742 | MS.gene44639 | -0.80177 | 7.70E-49 | -1.69E-46 |
MS.gene054927 | MS.gene44639 | 0.844155 | 9.01E-59 | -1.69E-46 |
MS.gene05494 | MS.gene44639 | 0.859318 | 4.49E-63 | -1.69E-46 |
MS.gene054954 | MS.gene44639 | 0.832487 | 9.19E-56 | -1.69E-46 |
MS.gene05505 | MS.gene44639 | 0.840932 | 6.46E-58 | -1.69E-46 |
MS.gene055206 | MS.gene44639 | 0.827627 | 1.41E-54 | -1.69E-46 |
MS.gene055224 | MS.gene44639 | 0.846677 | 1.87E-59 | -1.69E-46 |
MS.gene055289 | MS.gene44639 | 0.834127 | 3.59E-56 | -1.69E-46 |
MS.gene055362 | MS.gene44639 | 0.852254 | 5.21E-61 | -1.69E-46 |
MS.gene055502 | MS.gene44639 | 0.862268 | 5.72E-64 | -1.69E-46 |
MS.gene055577 | MS.gene44639 | 0.85429 | 1.36E-61 | -1.69E-46 |
MS.gene055722 | MS.gene44639 | 0.842039 | 3.30E-58 | -1.69E-46 |
MS.gene055741 | MS.gene44639 | 0.818826 | 1.60E-52 | -1.69E-46 |
MS.gene055744 | MS.gene44639 | 0.80979 | 1.59E-50 | -1.69E-46 |
MS.gene055748 | MS.gene44639 | 0.804025 | 2.63E-49 | -1.69E-46 |
MS.gene055750 | MS.gene44639 | 0.834186 | 3.47E-56 | -1.69E-46 |
MS.gene055751 | MS.gene44639 | 0.80448 | 2.12E-49 | -1.69E-46 |
MS.gene055787 | MS.gene44639 | -0.808279 | 3.35E-50 | -1.69E-46 |
MS.gene05589 | MS.gene44639 | 0.886302 | 3.85E-72 | -1.69E-46 |
MS.gene055909 | MS.gene44639 | 0.82151 | 3.89E-53 | -1.69E-46 |
MS.gene055911 | MS.gene44639 | 0.81566 | 8.25E-52 | -1.69E-46 |
MS.gene055941 | MS.gene44639 | 0.839772 | 1.30E-57 | -1.69E-46 |
MS.gene056040 | MS.gene44639 | 0.81223 | 4.71E-51 | -1.69E-46 |
MS.gene056046 | MS.gene44639 | 0.851755 | 7.22E-61 | -1.69E-46 |
MS.gene056166 | MS.gene44639 | 0.864073 | 1.58E-64 | -1.69E-46 |
MS.gene056387 | MS.gene44639 | 0.873914 | 1.02E-67 | -1.69E-46 |
MS.gene056409 | MS.gene44639 | 0.802615 | 5.16E-49 | -1.69E-46 |
MS.gene056446 | MS.gene44639 | 0.808098 | 3.66E-50 | -1.69E-46 |
MS.gene056448 | MS.gene44639 | 0.849065 | 4.11E-60 | -1.69E-46 |
MS.gene056487 | MS.gene44639 | 0.817372 | 3.41E-52 | -1.69E-46 |
MS.gene056504 | MS.gene44639 | 0.88179 | 1.79E-70 | -1.69E-46 |
MS.gene056510 | MS.gene44639 | 0.83488 | 2.32E-56 | -1.69E-46 |
MS.gene056511 | MS.gene44639 | 0.808218 | 3.45E-50 | -1.69E-46 |
MS.gene056610 | MS.gene44639 | 0.810489 | 1.12E-50 | -1.69E-46 |
MS.gene056657 | MS.gene44639 | 0.840537 | 8.19E-58 | -1.69E-46 |
MS.gene05666 | MS.gene44639 | 0.802829 | 4.66E-49 | -1.69E-46 |
MS.gene056692 | MS.gene44639 | 0.841258 | 5.30E-58 | -1.69E-46 |
MS.gene056878 | MS.gene44639 | 0.838519 | 2.74E-57 | -1.69E-46 |
MS.gene056946 | MS.gene44639 | 0.817406 | 3.35E-52 | -1.69E-46 |
MS.gene057019 | MS.gene44639 | 0.803785 | 2.95E-49 | -1.69E-46 |
MS.gene057048 | MS.gene44639 | 0.8367 | 8.02E-57 | -1.69E-46 |
MS.gene057076 | MS.gene44639 | 0.843272 | 1.55E-58 | -1.69E-46 |
MS.gene057086 | MS.gene44639 | 0.849463 | 3.18E-60 | -1.69E-46 |
MS.gene057173 | MS.gene44639 | -0.824074 | 9.83E-54 | -1.69E-46 |
MS.gene057289 | MS.gene44639 | 0.800571 | 1.35E-48 | -1.69E-46 |
MS.gene057416 | MS.gene44639 | 0.829479 | 5.03E-55 | -1.69E-46 |
MS.gene057658 | MS.gene44639 | 0.847341 | 1.23E-59 | -1.69E-46 |
MS.gene057734 | MS.gene44639 | 0.829185 | 5.93E-55 | -1.69E-46 |
MS.gene057805 | MS.gene44639 | 0.809167 | 2.16E-50 | -1.69E-46 |
MS.gene057831 | MS.gene44639 | 0.827609 | 1.42E-54 | -1.69E-46 |
MS.gene057856 | MS.gene44639 | 0.843356 | 1.47E-58 | -1.69E-46 |
MS.gene057857 | MS.gene44639 | 0.833929 | 4.02E-56 | -1.69E-46 |
MS.gene05787 | MS.gene44639 | 0.866876 | 2.07E-65 | -1.69E-46 |
MS.gene058130 | MS.gene44639 | 0.833409 | 5.42E-56 | -1.69E-46 |
MS.gene058157 | MS.gene44639 | 0.891062 | 5.59E-74 | -1.69E-46 |
MS.gene058338 | MS.gene44639 | 0.848728 | 5.09E-60 | -1.69E-46 |
MS.gene058376 | MS.gene44639 | 0.840819 | 6.91E-58 | -1.69E-46 |
MS.gene05837 | MS.gene44639 | 0.87958 | 1.11E-69 | -1.69E-46 |
MS.gene058419 | MS.gene44639 | 0.844843 | 5.88E-59 | -1.69E-46 |
MS.gene058444 | MS.gene44639 | 0.806491 | 8.02E-50 | -1.69E-46 |
MS.gene058544 | MS.gene44639 | 0.844751 | 6.23E-59 | -1.69E-46 |
MS.gene058723 | MS.gene44639 | 0.80072 | 1.26E-48 | -1.69E-46 |
MS.gene058773 | MS.gene44639 | 0.836224 | 1.06E-56 | -1.69E-46 |
MS.gene058838 | MS.gene44639 | 0.884309 | 2.14E-71 | -1.69E-46 |
MS.gene059022 | MS.gene44639 | 0.848677 | 5.26E-60 | -1.69E-46 |
MS.gene059023 | MS.gene44639 | 0.882666 | 8.60E-71 | -1.69E-46 |
MS.gene05913 | MS.gene44639 | 0.826405 | 2.76E-54 | -1.69E-46 |
MS.gene059303 | MS.gene44639 | 0.829425 | 5.18E-55 | -1.69E-46 |
MS.gene059305 | MS.gene44639 | 0.808291 | 3.33E-50 | -1.69E-46 |
MS.gene05934 | MS.gene44639 | 0.816368 | 5.73E-52 | -1.69E-46 |
MS.gene059367 | MS.gene44639 | 0.830399 | 3.00E-55 | -1.69E-46 |
MS.gene059368 | MS.gene44639 | 0.804806 | 1.81E-49 | -1.69E-46 |
MS.gene059455 | MS.gene44639 | 0.805382 | 1.37E-49 | -1.69E-46 |
MS.gene059667 | MS.gene44639 | 0.87043 | 1.47E-66 | -1.69E-46 |
MS.gene059677 | MS.gene44639 | 0.83795 | 3.84E-57 | -1.69E-46 |
MS.gene059718 | MS.gene44639 | 0.86398 | 1.69E-64 | -1.69E-46 |
MS.gene059756 | MS.gene44639 | 0.813991 | 1.93E-51 | -1.69E-46 |
MS.gene059801 | MS.gene44639 | 0.834217 | 3.41E-56 | -1.69E-46 |
MS.gene059837 | MS.gene44639 | 0.815427 | 9.29E-52 | -1.69E-46 |
MS.gene059865 | MS.gene44639 | 0.848175 | 7.25E-60 | -1.69E-46 |
MS.gene059902 | MS.gene44639 | 0.825747 | 3.96E-54 | -1.69E-46 |
MS.gene05995 | MS.gene44639 | 0.833295 | 5.79E-56 | -1.69E-46 |
MS.gene05996 | MS.gene44639 | 0.82525 | 5.19E-54 | -1.69E-46 |
MS.gene06000 | MS.gene44639 | 0.866061 | 3.75E-65 | -1.69E-46 |
MS.gene06027 | MS.gene44639 | 0.828087 | 1.09E-54 | -1.69E-46 |
MS.gene060372 | MS.gene44639 | 0.808875 | 2.50E-50 | -1.69E-46 |
MS.gene060482 | MS.gene44639 | 0.853482 | 2.32E-61 | -1.69E-46 |
MS.gene060485 | MS.gene44639 | 0.823553 | 1.30E-53 | -1.69E-46 |
MS.gene060593 | MS.gene44639 | -0.807469 | 4.98E-50 | -1.69E-46 |
MS.gene060595 | MS.gene44639 | -0.834665 | 2.63E-56 | -1.69E-46 |
MS.gene060703 | MS.gene44639 | 0.808011 | 3.82E-50 | -1.69E-46 |
MS.gene060762 | MS.gene44639 | 0.863275 | 2.80E-64 | -1.69E-46 |
MS.gene060778 | MS.gene44639 | 0.872861 | 2.30E-67 | -1.69E-46 |
MS.gene06077 | MS.gene44639 | 0.873071 | 1.95E-67 | -1.69E-46 |
MS.gene060835 | MS.gene44639 | 0.832063 | 1.17E-55 | -1.69E-46 |
MS.gene060837 | MS.gene44639 | 0.827065 | 1.92E-54 | -1.69E-46 |
MS.gene06092 | MS.gene44639 | 0.833386 | 5.49E-56 | -1.69E-46 |
MS.gene06097 | MS.gene44639 | 0.844073 | 9.47E-59 | -1.69E-46 |
MS.gene060982 | MS.gene44639 | 0.862392 | 5.24E-64 | -1.69E-46 |
MS.gene061150 | MS.gene44639 | 0.811177 | 7.98E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44639.t1 | MTR_7g014610 | 91.204 | 216 | 19 | 0 | 1 | 216 | 177 | 392 | 1.43e-147 | 419 |
MS.gene44639.t1 | MTR_7g014160 | 77.358 | 212 | 46 | 2 | 1 | 212 | 178 | 387 | 7.35e-117 | 341 |
MS.gene44639.t1 | MTR_7g014200 | 70.698 | 215 | 54 | 3 | 1 | 215 | 179 | 384 | 1.56e-103 | 307 |
MS.gene44639.t1 | MTR_7g014620 | 65.278 | 216 | 46 | 1 | 1 | 216 | 163 | 349 | 3.14e-96 | 287 |
MS.gene44639.t1 | MTR_7g013850 | 48.848 | 217 | 100 | 7 | 1 | 211 | 182 | 393 | 2.48e-59 | 194 |
MS.gene44639.t1 | MTR_7g014630 | 51.934 | 181 | 75 | 4 | 1 | 170 | 179 | 358 | 3.08e-51 | 169 |
MS.gene44639.t1 | MTR_7g014670 | 70.093 | 107 | 31 | 1 | 110 | 216 | 71 | 176 | 3.51e-50 | 164 |
MS.gene44639.t1 | MTR_7g014330 | 36.574 | 216 | 119 | 7 | 2 | 214 | 172 | 372 | 9.11e-34 | 125 |
MS.gene44639.t1 | MTR_7g014230 | 36.574 | 216 | 119 | 8 | 2 | 214 | 174 | 374 | 1.87e-32 | 122 |
MS.gene44639.t1 | MTR_7g014250 | 35.185 | 216 | 122 | 8 | 2 | 214 | 172 | 372 | 8.01e-32 | 120 |
MS.gene44639.t1 | MTR_6g015315 | 33.333 | 216 | 124 | 7 | 1 | 214 | 171 | 368 | 1.17e-27 | 109 |
MS.gene44639.t1 | MTR_6g015830 | 31.163 | 215 | 130 | 7 | 2 | 214 | 180 | 378 | 3.88e-24 | 99.4 |
MS.gene44639.t1 | MTR_7g014360 | 30.093 | 216 | 113 | 5 | 2 | 214 | 122 | 302 | 9.52e-24 | 97.8 |
MS.gene44639.t1 | MTR_6g015850 | 29.907 | 214 | 132 | 5 | 2 | 214 | 179 | 375 | 6.36e-23 | 95.9 |
MS.gene44639.t1 | MTR_6g015320 | 32.719 | 217 | 120 | 10 | 1 | 214 | 174 | 367 | 9.11e-23 | 95.5 |
MS.gene44639.t1 | MTR_6g015815 | 30.047 | 213 | 131 | 6 | 2 | 212 | 179 | 375 | 1.03e-22 | 95.5 |
MS.gene44639.t1 | MTR_2g089735 | 31.579 | 209 | 123 | 7 | 2 | 205 | 180 | 373 | 1.76e-19 | 86.3 |
MS.gene44639.t1 | MTR_3g028210 | 30.556 | 216 | 127 | 7 | 2 | 211 | 181 | 379 | 6.79e-17 | 79.0 |
MS.gene44639.t1 | MTR_8g012750 | 25.000 | 224 | 134 | 7 | 2 | 211 | 180 | 383 | 8.11e-13 | 67.0 |
MS.gene44639.t1 | MTR_7g014310 | 27.128 | 188 | 98 | 5 | 27 | 214 | 91 | 239 | 4.70e-12 | 64.3 |
MS.gene44639.t1 | MTR_3g087640 | 27.624 | 181 | 100 | 5 | 2 | 171 | 189 | 349 | 2.52e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44639.t1 | AT5G39050 | 32.701 | 211 | 131 | 5 | 2 | 210 | 180 | 381 | 2.90e-28 | 110 |
MS.gene44639.t1 | AT5G39080 | 33.178 | 214 | 120 | 9 | 1 | 206 | 174 | 372 | 7.28e-24 | 99.0 |
MS.gene44639.t1 | AT3G29590 | 33.333 | 174 | 92 | 4 | 1 | 174 | 172 | 321 | 9.89e-23 | 95.5 |
MS.gene44639.t1 | AT5G39090 | 31.905 | 210 | 111 | 9 | 2 | 206 | 175 | 357 | 5.65e-21 | 90.5 |
MS.gene44639.t1 | AT3G29670 | 28.436 | 211 | 121 | 7 | 2 | 208 | 176 | 360 | 1.07e-17 | 81.3 |
MS.gene44639.t1 | AT3G29635 | 30.435 | 207 | 118 | 8 | 2 | 204 | 177 | 361 | 1.87e-17 | 80.5 |
MS.gene44639.t1 | AT1G03940 | 28.182 | 220 | 125 | 8 | 2 | 212 | 184 | 379 | 3.26e-14 | 71.2 |
MS.gene44639.t1 | AT3G29680 | 29.255 | 188 | 111 | 5 | 2 | 188 | 172 | 338 | 4.64e-13 | 67.8 |
MS.gene44639.t1 | AT1G03495 | 28.415 | 183 | 102 | 8 | 2 | 179 | 184 | 342 | 4.60e-11 | 61.6 |
Find 43 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAATACCAAGTAACTTTAT+TGG | 0.177107 | 7.3:-83498024 | MS.gene44639:CDS |
AGCAAATGGTGTCATCAAAA+TGG | 0.211449 | 7.3:-83498218 | MS.gene44639:CDS |
CGAACAGAGTCTTCAAGTTT+TGG | 0.264523 | 7.3:+83498282 | None:intergenic |
CAAAGTTGGTGATTCTTCTT+TGG | 0.287688 | 7.3:+83498458 | None:intergenic |
ATTTAGAACCTTTATTTGAT+AGG | 0.295065 | 7.3:-83498428 | MS.gene44639:CDS |
ATGACTTCCCTATCAAATAA+AGG | 0.302241 | 7.3:+83498420 | None:intergenic |
AATGTAACACCGAGCTCATT+TGG | 0.311682 | 7.3:+83498390 | None:intergenic |
AGCCATTCACCGAGCTGATA+TGG | 0.316215 | 7.3:-83498103 | MS.gene44639:CDS |
ATCAAATAAAGGTTCTAAAT+CGG | 0.321888 | 7.3:+83498431 | None:intergenic |
ACTTTATTGGAAACTGTGTT+TGG | 0.321960 | 7.3:-83498011 | MS.gene44639:CDS |
ATGATGTACCCAAACGAAAA+AGG | 0.327194 | 7.3:-83498339 | MS.gene44639:CDS |
CTTTATTGGAAACTGTGTTT+GGG | 0.353721 | 7.3:-83498010 | MS.gene44639:CDS |
CCAATAAAGTTACTTGGTAT+TGG | 0.356036 | 7.3:+83498024 | None:intergenic |
ACAAAAGATGATAAAGTTTG+TGG | 0.412645 | 7.3:+83498162 | None:intergenic |
AACCATGTTCATCAAAGCTT+GGG | 0.425557 | 7.3:-83498508 | None:intergenic |
TCAAATAAAGGTTCTAAATC+GGG | 0.430929 | 7.3:+83498432 | None:intergenic |
ATGTAACACCGAGCTCATTT+GGG | 0.450273 | 7.3:+83498391 | None:intergenic |
GCAAATGGTGTCATCAAAAT+GGG | 0.462922 | 7.3:-83498217 | MS.gene44639:CDS |
TTTAGAACCTTTATTTGATA+GGG | 0.466219 | 7.3:-83498427 | MS.gene44639:CDS |
CAACCATGTTCATCAAAGCT+TGG | 0.466349 | 7.3:-83498509 | None:intergenic |
CAGTTTCCAATAAAGTTACT+TGG | 0.468590 | 7.3:+83498018 | None:intergenic |
CTCCATATCAGCTCGGTGAA+TGG | 0.469556 | 7.3:+83498101 | None:intergenic |
AATGAGAACGGTGTTCTTGA+AGG | 0.471924 | 7.3:-83497895 | MS.gene44639:CDS |
ATAAAGTTACTTGGTATTGG+TGG | 0.474612 | 7.3:+83498027 | None:intergenic |
CTTCATCGATACACAACCAT+TGG | 0.478861 | 7.3:-83497983 | MS.gene44639:CDS |
TTGGATTTCATAAAAGAAGA+TGG | 0.479620 | 7.3:-83497964 | MS.gene44639:CDS |
TTTGAACAAGATAAAGCAAA+TGG | 0.487133 | 7.3:-83498232 | MS.gene44639:CDS |
TCTAAATCGGGTAACAAAGT+TGG | 0.514035 | 7.3:+83498444 | None:intergenic |
GTGTTACATTCACAAATAGC+TGG | 0.520246 | 7.3:-83498377 | MS.gene44639:CDS |
GTACATCATAGATATAATCT+TGG | 0.522446 | 7.3:+83498353 | None:intergenic |
ATGAGAACGGTGTTCTTGAA+GGG | 0.527012 | 7.3:-83497894 | MS.gene44639:CDS |
CTTGAAGGGGCTATTAATGA+CGG | 0.544900 | 7.3:-83497880 | MS.gene44639:CDS |
TTGAAGGGGCTATTAATGAC+GGG | 0.545356 | 7.3:-83497879 | MS.gene44639:intron |
TAACCTTGCTCTGCAATCTA+CGG | 0.549902 | 7.3:+83498053 | None:intergenic |
ATCAAAGACCCAAATGAGCT+CGG | 0.581988 | 7.3:-83498399 | MS.gene44639:CDS |
TCACCGTAGATTGCAGAGCA+AGG | 0.598513 | 7.3:-83498056 | MS.gene44639:CDS |
ATAAAGATGATAAATGAGAA+CGG | 0.603049 | 7.3:-83497907 | MS.gene44639:CDS |
AGCCCAAGCTTTGATGAACA+TGG | 0.605776 | 7.3:+83498506 | None:intergenic |
TTTATTGGAAACTGTGTTTG+GGG | 0.609435 | 7.3:-83498009 | MS.gene44639:CDS |
TCTCTTTCTCCATATCAGCT+CGG | 0.619042 | 7.3:+83498094 | None:intergenic |
TGAGAACGGTGTTCTTGAAG+GGG | 0.630071 | 7.3:-83497893 | MS.gene44639:CDS |
TTCACGCGTGAGATTGAATG+TGG | 0.641803 | 7.3:+83498257 | None:intergenic |
TTATTGGAAACTGTGTTTGG+GGG | 0.644646 | 7.3:-83498008 | MS.gene44639:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGTGATCAATAAATATT+GGG | - | chr7.3:83498243-83498262 | MS.gene44639:CDS | 15.0% |
!! | TAAAAGTGATCAATAAATAT+TGG | - | chr7.3:83498242-83498261 | MS.gene44639:CDS | 15.0% |
!! | TATAATTCTTTGATAAATGA+AGG | - | chr7.3:83497931-83497950 | MS.gene44639:CDS | 15.0% |
!!! | AATTTCTTCTAATATTTTGT+GGG | - | chr7.3:83498142-83498161 | MS.gene44639:CDS | 15.0% |
!!! | ATTTATTGATCACTTTTATT+AGG | + | chr7.3:83498240-83498259 | None:intergenic | 15.0% |
!!! | TTTATTGATCACTTTTATTA+GGG | + | chr7.3:83498239-83498258 | None:intergenic | 15.0% |
!! | ATAAAGATGATAAATGAGAA+CGG | - | chr7.3:83497871-83497890 | MS.gene44639:intron | 20.0% |
!!! | ATCAAATAAAGGTTCTAAAT+CGG | + | chr7.3:83497350-83497369 | None:intergenic | 20.0% |
!!! | ATTTAGAACCTTTATTTGAT+AGG | - | chr7.3:83497350-83497369 | MS.gene44639:intron | 20.0% |
!!! | GAATTTCTTCTAATATTTTG+TGG | - | chr7.3:83498141-83498160 | MS.gene44639:CDS | 20.0% |
!!! | TTTAGAACCTTTATTTGATA+GGG | - | chr7.3:83497351-83497370 | MS.gene44639:intron | 20.0% |
! | ACAAAAGATGATAAAGTTTG+TGG | + | chr7.3:83497619-83497638 | None:intergenic | 25.0% |
! | ACGATTAAATTGTTTACATG+TGG | - | chr7.3:83498491-83498510 | MS.gene44639:CDS | 25.0% |
! | GTACATCATAGATATAATCT+TGG | + | chr7.3:83497428-83497447 | None:intergenic | 25.0% |
! | TCTTTGATAAATGAAGGATT+TGG | - | chr7.3:83497937-83497956 | MS.gene44639:CDS | 25.0% |
! | TTGGATTTCATAAAAGAAGA+TGG | - | chr7.3:83497814-83497833 | MS.gene44639:intron | 25.0% |
! | TTTGAACAAGATAAAGCAAA+TGG | - | chr7.3:83497546-83497565 | MS.gene44639:intron | 25.0% |
!! | ATCAATAAATATTGGGCTTT+TGG | - | chr7.3:83498250-83498269 | MS.gene44639:CDS | 25.0% |
!! | TCAATAAATATTGGGCTTTT+GGG | - | chr7.3:83498251-83498270 | MS.gene44639:CDS | 25.0% |
!! | TCTTCTTTTATGAAATCCAA+TGG | + | chr7.3:83497814-83497833 | None:intergenic | 25.0% |
!!! | AATAGATTTGGTGTTTATGT+AGG | - | chr7.3:83497982-83498001 | MS.gene44639:CDS | 25.0% |
!!! | ATAGATTTGGTGTTTATGTA+GGG | - | chr7.3:83497983-83498002 | MS.gene44639:CDS | 25.0% |
!!! | GGTTCTGATTTTAATAGAAA+CGG | - | chr7.3:83498180-83498199 | MS.gene44639:CDS | 25.0% |
!!! | TCAAATAAAGGTTCTAAATC+GGG | + | chr7.3:83497349-83497368 | None:intergenic | 25.0% |
ACTTTATTGGAAACTGTGTT+TGG | - | chr7.3:83497767-83497786 | MS.gene44639:intron | 30.0% | |
ATGACTTCCCTATCAAATAA+AGG | + | chr7.3:83497361-83497380 | None:intergenic | 30.0% | |
CAGTTTCCAATAAAGTTACT+TGG | + | chr7.3:83497763-83497782 | None:intergenic | 30.0% | |
CCAATAAAGTTACTTGGTAT+TGG | + | chr7.3:83497757-83497776 | None:intergenic | 30.0% | |
CCAATACCAAGTAACTTTAT+TGG | - | chr7.3:83497754-83497773 | MS.gene44639:intron | 30.0% | |
CTTTATTGGAAACTGTGTTT+GGG | - | chr7.3:83497768-83497787 | MS.gene44639:intron | 30.0% | |
TACTTGTAAACGATGATTAC+CGG | + | chr7.3:83498436-83498455 | None:intergenic | 30.0% | |
TTGTACGGTTATAAATAGAG+AGG | - | chr7.3:83498345-83498364 | MS.gene44639:CDS | 30.0% | |
TTTATTGGAAACTGTGTTTG+GGG | - | chr7.3:83497769-83497788 | MS.gene44639:intron | 30.0% | |
TTTGTGTAGAAACATAGTGT+AGG | - | chr7.3:83498286-83498305 | MS.gene44639:CDS | 30.0% | |
! | ATAAAGTTACTTGGTATTGG+TGG | + | chr7.3:83497754-83497773 | None:intergenic | 30.0% |
!! | AATGAAGGATTTGGAGTTTT+TGG | - | chr7.3:83497946-83497965 | MS.gene44639:CDS | 30.0% |
!! | TAGATTTGGTGTTTATGTAG+GGG | - | chr7.3:83497984-83498003 | MS.gene44639:CDS | 30.0% |
AATTCTAACATTCTCCCACT+TGG | + | chr7.3:83498126-83498145 | None:intergenic | 35.0% | |
ATGATGTACCCAAACGAAAA+AGG | - | chr7.3:83497439-83497458 | MS.gene44639:intron | 35.0% | |
ATTACTCTTGTCTCAGATCT+CGG | - | chr7.3:83498405-83498424 | MS.gene44639:CDS | 35.0% | |
ATTCTAACATTCTCCCACTT+GGG | + | chr7.3:83498125-83498144 | None:intergenic | 35.0% | |
ATTTATAACCGTACAACCCT+AGG | + | chr7.3:83498341-83498360 | None:intergenic | 35.0% | |
GTGTTACATTCACAAATAGC+TGG | - | chr7.3:83497401-83497420 | MS.gene44639:intron | 35.0% | |
TCTAAATCGGGTAACAAAGT+TGG | + | chr7.3:83497337-83497356 | None:intergenic | 35.0% | |
TTATTGGAAACTGTGTTTGG+GGG | - | chr7.3:83497770-83497789 | MS.gene44639:intron | 35.0% | |
!! | ACAATTGATTTTGCCCAAGT+GGG | - | chr7.3:83498109-83498128 | MS.gene44639:CDS | 35.0% |
!! | AGCAAATGGTGTCATCAAAA+TGG | - | chr7.3:83497560-83497579 | MS.gene44639:intron | 35.0% |
!! | CAAAGTTGGTGATTCTTCTT+TGG | + | chr7.3:83497323-83497342 | None:intergenic | 35.0% |
!! | GCAAATGGTGTCATCAAAAT+GGG | - | chr7.3:83497561-83497580 | MS.gene44639:intron | 35.0% |
!! | GTTCGTTTCCTTTTTCGTTT+GGG | + | chr7.3:83497450-83497469 | None:intergenic | 35.0% |
!! | TGATCCATTTGATGATGCTT+AGG | - | chr7.3:83498213-83498232 | MS.gene44639:CDS | 35.0% |
AATGAGAACGGTGTTCTTGA+AGG | - | chr7.3:83497883-83497902 | MS.gene44639:CDS | 40.0% | |
AATGTAACACCGAGCTCATT+TGG | + | chr7.3:83497391-83497410 | None:intergenic | 40.0% | |
ATAGTCAGAGTGATGGCAAA+CGG | + | chr7.3:83498378-83498397 | None:intergenic | 40.0% | |
ATCAAAGACCCAAATGAGCT+CGG | - | chr7.3:83497379-83497398 | MS.gene44639:intron | 40.0% | |
ATGAGAACGGTGTTCTTGAA+GGG | - | chr7.3:83497884-83497903 | MS.gene44639:CDS | 40.0% | |
ATGTAACACCGAGCTCATTT+GGG | + | chr7.3:83497390-83497409 | None:intergenic | 40.0% | |
CGAACCGATGAAATCTTCAT+CGG | - | chr7.3:83498050-83498069 | MS.gene44639:CDS | 40.0% | |
CGAACCGATGAAGATTTCAT+CGG | + | chr7.3:83498057-83498076 | None:intergenic | 40.0% | |
CGGTTATAAATAGAGAGGCT+AGG | - | chr7.3:83498350-83498369 | MS.gene44639:CDS | 40.0% | |
CTTCATCGATACACAACCAT+TGG | - | chr7.3:83497795-83497814 | MS.gene44639:intron | 40.0% | |
CTTGAAGGGGCTATTAATGA+CGG | - | chr7.3:83497898-83497917 | MS.gene44639:CDS | 40.0% | |
TAACCTTGCTCTGCAATCTA+CGG | + | chr7.3:83497728-83497747 | None:intergenic | 40.0% | |
TCTCTTTCTCCATATCAGCT+CGG | + | chr7.3:83497687-83497706 | None:intergenic | 40.0% | |
TTGAAGGGGCTATTAATGAC+GGG | - | chr7.3:83497899-83497918 | MS.gene44639:CDS | 40.0% | |
! | CGATGAAATCTTCATCGGTT+CGG | - | chr7.3:83498055-83498074 | MS.gene44639:CDS | 40.0% |
! | CGATGAAGATTTCATCGGTT+CGG | + | chr7.3:83498052-83498071 | None:intergenic | 40.0% |
! | GTGTTTATGTAGGGGTGTAA+CGG | - | chr7.3:83497992-83498011 | MS.gene44639:CDS | 40.0% |
! | TGTGGGCTACAATCAATTGT+TGG | - | chr7.3:83498159-83498178 | MS.gene44639:CDS | 40.0% |
!! | AAATCTTCATCGGTTCGGAT+TGG | - | chr7.3:83498060-83498079 | MS.gene44639:CDS | 40.0% |
!! | AGGATTTGGAGTTTTTGGAG+TGG | - | chr7.3:83497951-83497970 | MS.gene44639:CDS | 40.0% |
!! | CACAATTGATTTTGCCCAAG+TGG | - | chr7.3:83498108-83498127 | MS.gene44639:CDS | 40.0% |
!! | CGAACAGAGTCTTCAAGTTT+TGG | + | chr7.3:83497499-83497518 | None:intergenic | 40.0% |
!! | CGTTCGTTTCCTTTTTCGTT+TGG | + | chr7.3:83497451-83497470 | None:intergenic | 40.0% |
!!! | ATTTGGAGTTTTTGGAGTGG+CGG | - | chr7.3:83497954-83497973 | MS.gene44639:CDS | 40.0% |
AGGGCCTAAGCATCATCAAA+TGG | + | chr7.3:83498220-83498239 | None:intergenic | 45.0% | |
CCAAACACTAGACCCATGAT+GGG | - | chr7.3:83498310-83498329 | MS.gene44639:CDS | 45.0% | |
CCATCATGGGTCTAGTGTTT+GGG | + | chr7.3:83498312-83498331 | None:intergenic | 45.0% | |
GAGCAGAATAGTCAGAGTGA+TGG | + | chr7.3:83498385-83498404 | None:intergenic | 45.0% | |
TAGTCAGAGTGATGGCAAAC+GGG | + | chr7.3:83498377-83498396 | None:intergenic | 45.0% | |
TGAGAACGGTGTTCTTGAAG+GGG | - | chr7.3:83497885-83497904 | MS.gene44639:CDS | 45.0% | |
TTCACGCGTGAGATTGAATG+TGG | + | chr7.3:83497524-83497543 | None:intergenic | 45.0% | |
! | GTGGCGGGATCTAATAGATT+TGG | - | chr7.3:83497970-83497989 | MS.gene44639:CDS | 45.0% |
! | TATGTAGGGGTGTAACGGTT+CGG | - | chr7.3:83497997-83498016 | MS.gene44639:CDS | 45.0% |
!! | TTCATCGGTTCGGATTGGTT+CGG | - | chr7.3:83498065-83498084 | MS.gene44639:CDS | 45.0% |
!!! | TTTGGAGTTTTTGGAGTGGC+GGG | - | chr7.3:83497955-83497974 | MS.gene44639:CDS | 45.0% |
AGCCATTCACCGAGCTGATA+TGG | - | chr7.3:83497675-83497694 | MS.gene44639:intron | 50.0% | |
CCCAAACACTAGACCCATGA+TGG | - | chr7.3:83498309-83498328 | MS.gene44639:CDS | 50.0% | |
CCCATCATGGGTCTAGTGTT+TGG | + | chr7.3:83498313-83498332 | None:intergenic | 50.0% | |
TCACCGTAGATTGCAGAGCA+AGG | - | chr7.3:83497722-83497741 | MS.gene44639:intron | 50.0% | |
! | AACACTAGACCCATGATGGG+TGG | - | chr7.3:83498313-83498332 | MS.gene44639:CDS | 50.0% |
! | CTCCATATCAGCTCGGTGAA+TGG | + | chr7.3:83497680-83497699 | None:intergenic | 50.0% |
GTCTCAGATCTCGGCGAATC+CGG | - | chr7.3:83498414-83498433 | MS.gene44639:CDS | 55.0% | |
!! | AGGGGTGTAACGGTTCGGTT+TGG | - | chr7.3:83498002-83498021 | MS.gene44639:CDS | 55.0% |
ACCCTAGGCACCACCCATCA+TGG | + | chr7.3:83498326-83498345 | None:intergenic | 60.0% | |
CCCTAGGCACCACCCATCAT+GGG | + | chr7.3:83498325-83498344 | None:intergenic | 60.0% | |
GGGTGGTGCCTAGGGTTGTA+CGG | - | chr7.3:83498330-83498349 | MS.gene44639:CDS | 60.0% | |
!! | ACCCATGATGGGTGGTGCCT+AGG | - | chr7.3:83498321-83498340 | MS.gene44639:CDS | 60.0% |
!! | CCCATGATGGGTGGTGCCTA+GGG | - | chr7.3:83498322-83498341 | MS.gene44639:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 83497274 | 83498526 | 83497274 | ID=MS.gene44639 |
chr7.3 | mRNA | 83497274 | 83498526 | 83497274 | ID=MS.gene44639.t1;Parent=MS.gene44639 |
chr7.3 | exon | 83497880 | 83498526 | 83497880 | ID=MS.gene44639.t1.exon1;Parent=MS.gene44639.t1 |
chr7.3 | CDS | 83497880 | 83498526 | 83497880 | ID=cds.MS.gene44639.t1;Parent=MS.gene44639.t1 |
chr7.3 | exon | 83497274 | 83497280 | 83497274 | ID=MS.gene44639.t1.exon2;Parent=MS.gene44639.t1 |
chr7.3 | CDS | 83497274 | 83497280 | 83497274 | ID=cds.MS.gene44639.t1;Parent=MS.gene44639.t1 |
Gene Sequence |
Protein sequence |