AlfalfaGEDB | MS.gene064062

M. sativa cultivar XinJiangDaYe / MS.gene064062

KEGG: K01489
GO: GO:0003674 GO:0003824 GO:0004126 GO:0005488 GO:0006139 GO:0006213 GO:0006216 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009116 GO:0009119 GO:0009164 GO:0009972 GO:0009987 GO:0016787 GO:0016810 GO:0016814 GO:0019239 GO:0019439 GO:0034641 GO:0034655 GO:0034656 GO:0042454 GO:0043167 GO:0043169 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0046087 GO:0046131 GO:0046133 GO:0046135 GO:0046483 GO:0046700 GO:0046872 GO:0046914 GO:0055086 GO:0071704 GO:0072527 GO:0072529 GO:1901135 GO:1901136 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658
PFAM: PF00383.26 PF08211.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064062.t1	XP_003620936.1	96.3	297	11	0	1	297	1	297	3.70E-156	560.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064062.t1	O65896	56.8	301	118	5	1	292	1	298	1.8e-82	307.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064062.t1	G7KJU9	96.3	297	11	0	1	297	1	297	2.7e-156	560.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050170	MS.gene064062	-0.852278	5.13E-61	-1.69E-46
MS.gene050323	MS.gene064062	-0.823893	1.08E-53	-1.69E-46
MS.gene050381	MS.gene064062	0.804121	2.52E-49	-1.69E-46
MS.gene050496	MS.gene064062	-0.825425	4.72E-54	-1.69E-46
MS.gene050800	MS.gene064062	0.818376	2.03E-52	-1.69E-46
MS.gene050868	MS.gene064062	-0.840371	9.05E-58	-1.69E-46
MS.gene050871	MS.gene064062	-0.841477	4.64E-58	-1.69E-46
MS.gene05104	MS.gene064062	0.813521	2.45E-51	-1.69E-46
MS.gene051838	MS.gene064062	-0.805539	1.27E-49	-1.69E-46
MS.gene051946	MS.gene064062	0.819074	1.41E-52	-1.69E-46
MS.gene052015	MS.gene064062	0.809399	1.93E-50	-1.69E-46
MS.gene052164	MS.gene064062	-0.825849	3.74E-54	-1.69E-46
MS.gene05234	MS.gene064062	0.812484	4.14E-51	-1.69E-46
MS.gene052482	MS.gene064062	-0.813237	2.83E-51	-1.69E-46
MS.gene052486	MS.gene064062	-0.820262	7.53E-53	-1.69E-46
MS.gene052494	MS.gene064062	0.821361	4.21E-53	-1.69E-46
MS.gene052503	MS.gene064062	-0.835052	2.10E-56	-1.69E-46
MS.gene052823	MS.gene064062	-0.847047	1.48E-59	-1.69E-46
MS.gene052825	MS.gene064062	-0.851135	1.08E-60	-1.69E-46
MS.gene053097	MS.gene064062	0.80948	1.85E-50	-1.69E-46
MS.gene053203	MS.gene064062	-0.842856	2.00E-58	-1.69E-46
MS.gene053420	MS.gene064062	0.815264	1.01E-51	-1.69E-46
MS.gene053421	MS.gene064062	0.822243	2.63E-53	-1.69E-46
MS.gene053480	MS.gene064062	-0.800212	1.60E-48	-1.69E-46
MS.gene053824	MS.gene064062	-0.812857	3.43E-51	-1.69E-46
MS.gene054003	MS.gene064062	-0.827342	1.65E-54	-1.69E-46
MS.gene054706	MS.gene064062	0.830948	2.20E-55	-1.69E-46
MS.gene054707	MS.gene064062	0.81189	5.58E-51	-1.69E-46
MS.gene05470	MS.gene064062	-0.818669	1.74E-52	-1.69E-46
MS.gene055502	MS.gene064062	-0.804122	2.51E-49	-1.69E-46
MS.gene055577	MS.gene064062	-0.826278	2.96E-54	-1.69E-46
MS.gene055787	MS.gene064062	0.833497	5.15E-56	-1.69E-46
MS.gene05589	MS.gene064062	-0.826365	2.82E-54	-1.69E-46
MS.gene056046	MS.gene064062	-0.816007	6.90E-52	-1.69E-46
MS.gene056198	MS.gene064062	0.813401	2.61E-51	-1.69E-46
MS.gene056387	MS.gene064062	-0.82609	3.28E-54	-1.69E-46
MS.gene056504	MS.gene064062	-0.828852	7.14E-55	-1.69E-46
MS.gene057014	MS.gene064062	0.833265	5.89E-56	-1.69E-46
MS.gene057173	MS.gene064062	0.837935	3.87E-57	-1.69E-46
MS.gene057261	MS.gene064062	0.803826	2.90E-49	-1.69E-46
MS.gene05726	MS.gene064062	0.869914	2.17E-66	-1.69E-46
MS.gene058068	MS.gene064062	0.808095	3.66E-50	-1.69E-46
MS.gene058157	MS.gene064062	-0.902336	1.08E-78	-1.69E-46
MS.gene058171	MS.gene064062	0.802107	6.56E-49	-1.69E-46
MS.gene05837	MS.gene064062	-0.825553	4.40E-54	-1.69E-46
MS.gene058838	MS.gene064062	-0.802749	4.84E-49	-1.69E-46
MS.gene059023	MS.gene064062	-0.809803	1.58E-50	-1.69E-46
MS.gene059223	MS.gene064062	0.845734	3.38E-59	-1.69E-46
MS.gene059303	MS.gene064062	-0.801655	8.13E-49	-1.69E-46
MS.gene05960	MS.gene064062	0.801801	7.59E-49	-1.69E-46
MS.gene059699	MS.gene064062	0.800753	1.24E-48	-1.69E-46
MS.gene059703	MS.gene064062	0.824347	8.48E-54	-1.69E-46
MS.gene059718	MS.gene064062	-0.808722	2.69E-50	-1.69E-46
MS.gene059865	MS.gene064062	-0.800654	1.30E-48	-1.69E-46
MS.gene05995	MS.gene064062	-0.835497	1.62E-56	-1.69E-46
MS.gene05996	MS.gene064062	-0.824436	8.08E-54	-1.69E-46
MS.gene059971	MS.gene064062	0.808123	3.61E-50	-1.69E-46
MS.gene06000	MS.gene064062	-0.825007	5.93E-54	-1.69E-46
MS.gene060187	MS.gene064062	0.828614	8.15E-55	-1.69E-46
MS.gene060595	MS.gene064062	0.837516	4.96E-57	-1.69E-46
MS.gene060778	MS.gene064062	-0.824845	6.47E-54	-1.69E-46
MS.gene06077	MS.gene064062	-0.831159	1.95E-55	-1.69E-46
MS.gene060982	MS.gene064062	-0.807074	6.04E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064062.t1	MTR_6g092660	96.296	297	11	0	1	297	1	297	0.0	583
MS.gene064062.t1	MTR_8g101570	60.068	293	109	3	1	292	1	286	5.52e-121	348

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064062.t1	AT2G19570	55.814	301	121	4	1	292	1	298	2.28e-108	317
MS.gene064062.t1	AT4G29610	50.719	278	125	5	28	298	21	293	2.15e-85	258
MS.gene064062.t1	AT4G29600	48.658	298	134	6	5	292	8	296	1.09e-82	252
MS.gene064062.t1	AT4G29620	45.791	297	138	5	5	293	29	310	2.51e-75	234
MS.gene064062.t1	AT4G29570	44.625	307	140	11	1	292	1	292	4.42e-63	201
MS.gene064062.t1	AT4G29630	47.788	226	104	3	2	219	4	223	2.27e-58	187
MS.gene064062.t1	AT4G29640	41.613	310	155	11	2	298	3	299	2.74e-56	185
MS.gene064062.t1	AT4G29580	43.657	268	131	8	27	282	27	286	2.89e-50	168
MS.gene064062.t1	AT4G29580	43.657	268	131	8	27	282	27	286	5.55e-49	169
MS.gene064062.t1	AT4G29650	39.041	292	128	8	2	292	3	245	2.67e-47	159

Find 98 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCCTTCAGGTGTGGCTTTAC+TGG	0.180402	6.1:+79618813	MS.gene064062:CDS
GATGCTTCTATTATGAATTT+AGG	0.212943	6.1:-79618214	None:intergenic
GAGTTTCTTTGTTATGAAAA+AGG	0.248603	6.1:-79618459	None:intergenic
TTAGGGTTAGGTTTGTTGAT+TGG	0.275993	6.1:-79618255	None:intergenic
TAGGGTTAGGTTTGTTGATT+GGG	0.297609	6.1:-79618254	None:intergenic
AAGAGAAGAGGAACATGTTT+AGG	0.300564	6.1:-79618664	None:intergenic
TGATGGGAAGGAGTTGGGTT+AGG	0.306745	6.1:-79618273	None:intergenic
TCCTAGCATGGGACCGGTTC+AGG	0.312849	6.1:+79618888	MS.gene064062:CDS
GACGGCGGCAACGTGAAATT+TGG	0.324323	6.1:-79618335	None:intergenic
CTTTCAGTGCTGCATCCTTC+AGG	0.328078	6.1:-79618756	None:intergenic
ATACGGCAAGGCTGTTTCTT+AGG	0.332593	6.1:+79619019	MS.gene064062:CDS
TGTTTATAAAGGTAGTTATA+TGG	0.339228	6.1:+79618849	MS.gene064062:CDS
GAATTCCTTTCTCATCCCTT+TGG	0.345512	6.1:+79618625	MS.gene064062:CDS
GACAATGATGGGAAGGAGTT+GGG	0.351225	6.1:-79618278	None:intergenic
GGAGACGGTGCGGCGGAGTA+TGG	0.354349	6.1:+79618940	MS.gene064062:CDS
GGGACCGGTTCAGGCTGCTT+TGG	0.365571	6.1:+79618897	MS.gene064062:CDS
CCGTACAGTGACTCGCCTTC+AGG	0.365727	6.1:+79618799	MS.gene064062:CDS
CACGGATTTCTTGAAGAAAC+TGG	0.368852	6.1:-79618528	None:intergenic
GAAGGAGTTGGGTTAGGGTT+AGG	0.374079	6.1:-79618267	None:intergenic
GCAACGTGAAATTTGGAGAT+AGG	0.374243	6.1:-79618328	None:intergenic
AGAGGATGCGGTGGTGAAAC+AGG	0.378180	6.1:+79618993	MS.gene064062:CDS
TAAACATGTTCCTCTTCTCT+TGG	0.383408	6.1:+79618666	MS.gene064062:CDS
GATGGGAAGGAGTTGGGTTA+GGG	0.393643	6.1:-79618272	None:intergenic
CACGTTGCCGCCGTCGCTGT+TGG	0.395330	6.1:+79618343	MS.gene064062:CDS
TCACGTGGGAATGTTTATAA+AGG	0.399839	6.1:+79618838	MS.gene064062:CDS
GCCACCAAAGCAGCCTGAAC+CGG	0.415674	6.1:-79618901	None:intergenic
ACCGGTTCAGGCTGCTTTGG+TGG	0.418994	6.1:+79618900	MS.gene064062:CDS
TGACAATGATGGGAAGGAGT+TGG	0.424779	6.1:-79618279	None:intergenic
TGCGGCGGAGTATGGAGAAT+TGG	0.433354	6.1:+79618948	MS.gene064062:CDS
GTATGGTGGAAAGGAAGGTT+AGG	0.441709	6.1:-79618406	None:intergenic
GAGATAGGGACACGGGCTAA+TGG	0.450344	6.1:-79618313	None:intergenic
AGGGACACGGGCTAATGGTT+GGG	0.455742	6.1:-79618308	None:intergenic
CTTGAAGAAACTGGCGGCAA+TGG	0.468441	6.1:-79618519	None:intergenic
GCCGTCGCTGTTGGAATCTC+CGG	0.472457	6.1:+79618352	MS.gene064062:CDS
TTTATTGTCGGTGCCGGAGA+CGG	0.475580	6.1:+79618925	MS.gene064062:CDS
AGAATTGGTGGAAGCGGTGT+TGG	0.478163	6.1:+79618963	MS.gene064062:CDS
GGATGGTATGGTGGAAAGGA+AGG	0.479635	6.1:-79618411	None:intergenic
TTGGGATGATTTGACAATGA+TGG	0.485433	6.1:-79618290	None:intergenic
TAGGGACACGGGCTAATGGT+TGG	0.490242	6.1:-79618309	None:intergenic
TCTTCGAATCAGATGTTATG+AGG	0.491889	6.1:-79618570	None:intergenic
ATACTCCGCCGCACCGTCTC+CGG	0.496985	6.1:-79618938	None:intergenic
CTTCAAGAAATCCGTGGCGC+CGG	0.503869	6.1:+79618535	MS.gene064062:CDS
ATTGGTGGAAGCGGTGTTGG+TGG	0.506203	6.1:+79618966	MS.gene064062:CDS
TTCAATAAAGCCACACCTGA+AGG	0.511344	6.1:+79618741	MS.gene064062:CDS
TGCAGCTTATAATCCTAGCA+TGG	0.518529	6.1:+79618876	MS.gene064062:CDS
AGTGCTGCATCCTTCAGGTG+TGG	0.533445	6.1:-79618751	None:intergenic
TGGGATGATTTGACAATGAT+GGG	0.533779	6.1:-79618289	None:intergenic
GAGAAACTGTTCAGCATGGA+TGG	0.539294	6.1:-79618428	None:intergenic
GCCTGAACCGGTCCCATGCT+AGG	0.541079	6.1:-79618889	None:intergenic
TATGGTGGAAAGGAAGGTTA+GGG	0.550775	6.1:-79618405	None:intergenic
AGAAGATCATGAGGACCAAA+GGG	0.550838	6.1:-79618640	None:intergenic
AAGAAGATCATGAGGACCAA+AGG	0.551279	6.1:-79618641	None:intergenic
TCCAGTAAAGCCACACCTGA+AGG	0.553848	6.1:-79618814	None:intergenic
CAACGTGAAATTTGGAGATA+GGG	0.554542	6.1:-79618327	None:intergenic
ACTGTTCAGCATGGATGGTA+TGG	0.559714	6.1:-79618423	None:intergenic
GAGGACCAAAGGGATGAGAA+AGG	0.560227	6.1:-79618630	None:intergenic
AGCGGTGTTGGTGGAGAAAG+AGG	0.561960	6.1:+79618975	MS.gene064062:CDS
CAGTGACTCGCCTTCAGGTG+TGG	0.562015	6.1:+79618804	MS.gene064062:CDS
GGTGGTGAAACAGGAGGATA+CGG	0.564967	6.1:+79619002	MS.gene064062:CDS
GCATGGATGGTATGGTGGAA+AGG	0.568653	6.1:-79618415	None:intergenic
AACTGGCGGCAATGGCCACA+AGG	0.571846	6.1:-79618511	None:intergenic
TTATAATCCTAGCATGGGAC+CGG	0.572239	6.1:+79618882	MS.gene064062:CDS
GTATGGAGAATTGGTGGAAG+CGG	0.578039	6.1:+79618957	MS.gene064062:CDS
GAAGCTACATTGAGGTGCGA+TGG	0.586638	6.1:-79619043	None:intergenic
TTAAGAGAAACTGTTCAGCA+TGG	0.588008	6.1:-79618432	None:intergenic
GAAGGATGCAGCACTGAAAG+CGG	0.589558	6.1:+79618759	MS.gene064062:CDS
ATCTCCGGTCGAATCTTCAT+CGG	0.594505	6.1:+79618367	MS.gene064062:CDS
GAGGAATATCTCCGGCGCCA+CGG	0.594736	6.1:-79618546	None:intergenic
CCTGAAGGCGAGTCACTGTA+CGG	0.600648	6.1:-79618799	None:intergenic
GGCGGAGTATGGAGAATTGG+TGG	0.610347	6.1:+79618951	MS.gene064062:CDS
CAGTTTCTTCAAGAAATCCG+TGG	0.610963	6.1:+79618529	MS.gene064062:CDS
GTTGGTGGAGAAAGAGGATG+CGG	0.610963	6.1:+79618981	MS.gene064062:CDS
TGTCGGTGCCGGAGACGGTG+CGG	0.611623	6.1:+79618930	MS.gene064062:CDS
ACCGGAGATTCCAACAGCGA+CGG	0.615346	6.1:-79618353	None:intergenic
GCAGCTTATAATCCTAGCAT+GGG	0.617961	6.1:+79618877	MS.gene064062:CDS
GGAGATTCCAACAGCGACGG+CGG	0.619242	6.1:-79618350	None:intergenic
GCTGTATCCGCTGCACCTTG+TGG	0.624321	6.1:+79618496	MS.gene064062:CDS
TGACGTGGTTCCAAGAGAAG+AGG	0.624352	6.1:-79618676	None:intergenic
TATGAGGAGAGGAATATCTC+CGG	0.625052	6.1:-79618554	None:intergenic
GACGCCGATGAAGATTCGAC+CGG	0.625190	6.1:-79618371	None:intergenic
ATGATTTGACAATGATGGGA+AGG	0.628836	6.1:-79618285	None:intergenic
CGGTGCCGGAGACGGTGCGG+CGG	0.633103	6.1:+79618933	MS.gene064062:CDS
GAATCAGATGTTATGAGGAG+AGG	0.641146	6.1:-79618565	None:intergenic
GCAATGGCCACAAGGTGCAG+CGG	0.645064	6.1:-79618503	None:intergenic
GTTCAGCATGGATGGTATGG+TGG	0.647203	6.1:-79618420	None:intergenic
AAATTTGGAGATAGGGACAC+GGG	0.647299	6.1:-79618320	None:intergenic
GTGGCTTTACTGGATTCACG+TGG	0.658001	6.1:+79618823	MS.gene064062:CDS
TGTTTAGGAAGAAGATCATG+AGG	0.661557	6.1:-79618649	None:intergenic
ACCACATTGAAGCTACATTG+AGG	0.663804	6.1:-79619051	None:intergenic
AAGGTGCAGCGGATACAGCA+AGG	0.664429	6.1:-79618492	None:intergenic
GAAATTTGGAGATAGGGACA+CGG	0.671783	6.1:-79618321	None:intergenic
GGATTTCTTGAAGAAACTGG+CGG	0.674203	6.1:-79618525	None:intergenic
TGGCTTTACTGGATTCACGT+GGG	0.675090	6.1:+79618824	MS.gene064062:CDS
GGTGGAGAAAGAGGATGCGG+TGG	0.682018	6.1:+79618984	MS.gene064062:CDS
GGATGCGGTGGTGAAACAGG+AGG	0.700486	6.1:+79618996	MS.gene064062:CDS
ACCTCAATGTAGCTTCAATG+TGG	0.704261	6.1:+79619050	MS.gene064062:CDS
AAACACAAATCATTGTGACG+TGG	0.715133	6.1:-79618691	None:intergenic
TGAAACAGGAGGATACGGCA+AGG	0.721213	6.1:+79619007	MS.gene064062:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTTTATAAAGGTAGTTATA+TGG	+	chr6.1:79618849-79618868	MS.gene064062:CDS	20.0%
!!!	TTGTGTTTTATAGAAATAGA+AGG	+	chr6.1:79618706-79618725	MS.gene064062:CDS	20.0%
!	GATGCTTCTATTATGAATTT+AGG	-	chr6.1:79618217-79618236	None:intergenic	25.0%
!!	GAGTTTCTTTGTTATGAAAA+AGG	-	chr6.1:79618462-79618481	None:intergenic	25.0%
	AAACACAAATCATTGTGACG+TGG	-	chr6.1:79618694-79618713	None:intergenic	35.0%
	AAGAGAAGAGGAACATGTTT+AGG	-	chr6.1:79618667-79618686	None:intergenic	35.0%
	CAACGTGAAATTTGGAGATA+GGG	-	chr6.1:79618330-79618349	None:intergenic	35.0%
	TAAACATGTTCCTCTTCTCT+TGG	+	chr6.1:79618666-79618685	MS.gene064062:CDS	35.0%
	TCACGTGGGAATGTTTATAA+AGG	+	chr6.1:79618838-79618857	MS.gene064062:CDS	35.0%
	TCTTCGAATCAGATGTTATG+AGG	-	chr6.1:79618573-79618592	None:intergenic	35.0%
	TGGGATGATTTGACAATGAT+GGG	-	chr6.1:79618292-79618311	None:intergenic	35.0%
	TGTTTAGGAAGAAGATCATG+AGG	-	chr6.1:79618652-79618671	None:intergenic	35.0%
	TTAAGAGAAACTGTTCAGCA+TGG	-	chr6.1:79618435-79618454	None:intergenic	35.0%
	TTGGGATGATTTGACAATGA+TGG	-	chr6.1:79618293-79618312	None:intergenic	35.0%
!	ATGATTTGACAATGATGGGA+AGG	-	chr6.1:79618288-79618307	None:intergenic	35.0%
!!	TAGGGTTAGGTTTGTTGATT+GGG	-	chr6.1:79618257-79618276	None:intergenic	35.0%
!!	TTAGGGTTAGGTTTGTTGAT+TGG	-	chr6.1:79618258-79618277	None:intergenic	35.0%
	AAATTTGGAGATAGGGACAC+GGG	-	chr6.1:79618323-79618342	None:intergenic	40.0%
	AAGAAGATCATGAGGACCAA+AGG	-	chr6.1:79618644-79618663	None:intergenic	40.0%
	ACCACATTGAAGCTACATTG+AGG	-	chr6.1:79619054-79619073	None:intergenic	40.0%
	ACCTCAATGTAGCTTCAATG+TGG	+	chr6.1:79619050-79619069	MS.gene064062:CDS	40.0%
	AGAAGATCATGAGGACCAAA+GGG	-	chr6.1:79618643-79618662	None:intergenic	40.0%
	CACGGATTTCTTGAAGAAAC+TGG	-	chr6.1:79618531-79618550	None:intergenic	40.0%
	CAGTTTCTTCAAGAAATCCG+TGG	+	chr6.1:79618529-79618548	MS.gene064062:CDS	40.0%
	GAAATTTGGAGATAGGGACA+CGG	-	chr6.1:79618324-79618343	None:intergenic	40.0%
	GAATCAGATGTTATGAGGAG+AGG	-	chr6.1:79618568-79618587	None:intergenic	40.0%
	GAATTCCTTTCTCATCCCTT+TGG	+	chr6.1:79618625-79618644	MS.gene064062:CDS	40.0%
	GCAACGTGAAATTTGGAGAT+AGG	-	chr6.1:79618331-79618350	None:intergenic	40.0%
	GCAGCTTATAATCCTAGCAT+GGG	+	chr6.1:79618877-79618896	MS.gene064062:CDS	40.0%
	GGATTTCTTGAAGAAACTGG+CGG	-	chr6.1:79618528-79618547	None:intergenic	40.0%
	TATGAGGAGAGGAATATCTC+CGG	-	chr6.1:79618557-79618576	None:intergenic	40.0%
	TGCAGCTTATAATCCTAGCA+TGG	+	chr6.1:79618876-79618895	MS.gene064062:CDS	40.0%
	TTATAATCCTAGCATGGGAC+CGG	+	chr6.1:79618882-79618901	MS.gene064062:CDS	40.0%
	TTCAATAAAGCCACACCTGA+AGG	+	chr6.1:79618741-79618760	MS.gene064062:CDS	40.0%
!	TATGGTGGAAAGGAAGGTTA+GGG	-	chr6.1:79618408-79618427	None:intergenic	40.0%
!!	GCTTTGGTGGCTTTTATTGT+CGG	+	chr6.1:79618913-79618932	MS.gene064062:CDS	40.0%
	ACTGTTCAGCATGGATGGTA+TGG	-	chr6.1:79618426-79618445	None:intergenic	45.0%
	ATCTCCGGTCGAATCTTCAT+CGG	+	chr6.1:79618367-79618386	MS.gene064062:CDS	45.0%
	GAGAAACTGTTCAGCATGGA+TGG	-	chr6.1:79618431-79618450	None:intergenic	45.0%
	GTATGGAGAATTGGTGGAAG+CGG	+	chr6.1:79618957-79618976	MS.gene064062:CDS	45.0%
!	GACAATGATGGGAAGGAGTT+GGG	-	chr6.1:79618281-79618300	None:intergenic	45.0%
!	GTATGGTGGAAAGGAAGGTT+AGG	-	chr6.1:79618409-79618428	None:intergenic	45.0%
!	TGACAATGATGGGAAGGAGT+TGG	-	chr6.1:79618282-79618301	None:intergenic	45.0%
!	TGGCTTTACTGGATTCACGT+GGG	+	chr6.1:79618824-79618843	MS.gene064062:CDS	45.0%
!!	ATACGGCAAGGCTGTTTCTT+AGG	+	chr6.1:79619019-79619038	MS.gene064062:CDS	45.0%
	AGAATTGGTGGAAGCGGTGT+TGG	+	chr6.1:79618963-79618982	MS.gene064062:CDS	50.0%
	CTTGAAGAAACTGGCGGCAA+TGG	-	chr6.1:79618522-79618541	None:intergenic	50.0%
	CTTTCAGTGCTGCATCCTTC+AGG	-	chr6.1:79618759-79618778	None:intergenic	50.0%
	GAAGCTACATTGAGGTGCGA+TGG	-	chr6.1:79619046-79619065	None:intergenic	50.0%
	GAGGACCAAAGGGATGAGAA+AGG	-	chr6.1:79618633-79618652	None:intergenic	50.0%
	GATGGGAAGGAGTTGGGTTA+GGG	-	chr6.1:79618275-79618294	None:intergenic	50.0%
	GGTGGTGAAACAGGAGGATA+CGG	+	chr6.1:79619002-79619021	MS.gene064062:CDS	50.0%
	GTTCAGCATGGATGGTATGG+TGG	-	chr6.1:79618423-79618442	None:intergenic	50.0%
	TCCAGTAAAGCCACACCTGA+AGG	-	chr6.1:79618817-79618836	None:intergenic	50.0%
	TGAAACAGGAGGATACGGCA+AGG	+	chr6.1:79619007-79619026	MS.gene064062:CDS	50.0%
	TGACGTGGTTCCAAGAGAAG+AGG	-	chr6.1:79618679-79618698	None:intergenic	50.0%
	TGATGGGAAGGAGTTGGGTT+AGG	-	chr6.1:79618276-79618295	None:intergenic	50.0%
!	GAAGGAGTTGGGTTAGGGTT+AGG	-	chr6.1:79618270-79618289	None:intergenic	50.0%
!	GAAGGATGCAGCACTGAAAG+CGG	+	chr6.1:79618759-79618778	MS.gene064062:CDS	50.0%
!	GCATGGATGGTATGGTGGAA+AGG	-	chr6.1:79618418-79618437	None:intergenic	50.0%
!	GGATGGTATGGTGGAAAGGA+AGG	-	chr6.1:79618414-79618433	None:intergenic	50.0%
!	GTGGCTTTACTGGATTCACG+TGG	+	chr6.1:79618823-79618842	MS.gene064062:CDS	50.0%
!	GTGGCTTTTATTGTCGGTGC+CGG	+	chr6.1:79618919-79618938	MS.gene064062:CDS	50.0%
!	GTTGGTGGAGAAAGAGGATG+CGG	+	chr6.1:79618981-79619000	MS.gene064062:CDS	50.0%
!!	TTTATTGTCGGTGCCGGAGA+CGG	+	chr6.1:79618925-79618944	MS.gene064062:CDS	50.0%
	AAGGTGCAGCGGATACAGCA+AGG	-	chr6.1:79618495-79618514	None:intergenic	55.0%
	ACCGGAGATTCCAACAGCGA+CGG	-	chr6.1:79618356-79618375	None:intergenic	55.0%
	AGAGGATGCGGTGGTGAAAC+AGG	+	chr6.1:79618993-79619012	MS.gene064062:CDS	55.0%
	AGTGCTGCATCCTTCAGGTG+TGG	-	chr6.1:79618754-79618773	None:intergenic	55.0%
	CCTGAAGGCGAGTCACTGTA+CGG	-	chr6.1:79618802-79618821	None:intergenic	55.0%
	CTTCAAGAAATCCGTGGCGC+CGG	+	chr6.1:79618535-79618554	MS.gene064062:CDS	55.0%
	GACGCCGATGAAGATTCGAC+CGG	-	chr6.1:79618374-79618393	None:intergenic	55.0%
	GACGGCGGCAACGTGAAATT+TGG	-	chr6.1:79618338-79618357	None:intergenic	55.0%
	GGCGGAGTATGGAGAATTGG+TGG	+	chr6.1:79618951-79618970	MS.gene064062:CDS	55.0%
	TGCGGCGGAGTATGGAGAAT+TGG	+	chr6.1:79618948-79618967	MS.gene064062:CDS	55.0%
!	AGGGACACGGGCTAATGGTT+GGG	-	chr6.1:79618311-79618330	None:intergenic	55.0%
!	ATTGGTGGAAGCGGTGTTGG+TGG	+	chr6.1:79618966-79618985	MS.gene064062:CDS	55.0%
!	GAGATAGGGACACGGGCTAA+TGG	-	chr6.1:79618316-79618335	None:intergenic	55.0%
!	GCCTTCAGGTGTGGCTTTAC+TGG	+	chr6.1:79618813-79618832	MS.gene064062:CDS	55.0%
!	TAGGGACACGGGCTAATGGT+TGG	-	chr6.1:79618312-79618331	None:intergenic	55.0%
!!	AGCGGTGTTGGTGGAGAAAG+AGG	+	chr6.1:79618975-79618994	MS.gene064062:CDS	55.0%
	AACTGGCGGCAATGGCCACA+AGG	-	chr6.1:79618514-79618533	None:intergenic	60.0%
	CAGTGACTCGCCTTCAGGTG+TGG	+	chr6.1:79618804-79618823	MS.gene064062:CDS	60.0%
	CCGTACAGTGACTCGCCTTC+AGG	+	chr6.1:79618799-79618818	MS.gene064062:CDS	60.0%
	GAGGAATATCTCCGGCGCCA+CGG	-	chr6.1:79618549-79618568	None:intergenic	60.0%
	GCAATGGCCACAAGGTGCAG+CGG	-	chr6.1:79618506-79618525	None:intergenic	60.0%
	GCCACCAAAGCAGCCTGAAC+CGG	-	chr6.1:79618904-79618923	None:intergenic	60.0%
	GCCGTCGCTGTTGGAATCTC+CGG	+	chr6.1:79618352-79618371	MS.gene064062:CDS	60.0%
	GCTGTATCCGCTGCACCTTG+TGG	+	chr6.1:79618496-79618515	MS.gene064062:CDS	60.0%
	GGAGATTCCAACAGCGACGG+CGG	-	chr6.1:79618353-79618372	None:intergenic	60.0%
	GGATGCGGTGGTGAAACAGG+AGG	+	chr6.1:79618996-79619015	MS.gene064062:CDS	60.0%
	GGTGGAGAAAGAGGATGCGG+TGG	+	chr6.1:79618984-79619003	MS.gene064062:CDS	60.0%
!	ACCGGTTCAGGCTGCTTTGG+TGG	+	chr6.1:79618900-79618919	MS.gene064062:CDS	60.0%
!	TCCTAGCATGGGACCGGTTC+AGG	+	chr6.1:79618888-79618907	MS.gene064062:CDS	60.0%
	ATACTCCGCCGCACCGTCTC+CGG	-	chr6.1:79618941-79618960	None:intergenic	65.0%
	GCCTGAACCGGTCCCATGCT+AGG	-	chr6.1:79618892-79618911	None:intergenic	65.0%
!	GGGACCGGTTCAGGCTGCTT+TGG	+	chr6.1:79618897-79618916	MS.gene064062:CDS	65.0%
	CACGTTGCCGCCGTCGCTGT+TGG	+	chr6.1:79618343-79618362	MS.gene064062:CDS	70.0%
	GGAGACGGTGCGGCGGAGTA+TGG	+	chr6.1:79618940-79618959	MS.gene064062:CDS	70.0%
!!	TGTCGGTGCCGGAGACGGTG+CGG	+	chr6.1:79618930-79618949	MS.gene064062:CDS	70.0%
!!	CGGTGCCGGAGACGGTGCGG+CGG	+	chr6.1:79618933-79618952	MS.gene064062:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.1	gene	79618205	79619104	79618205	ID=MS.gene064062
chr6.1	mRNA	79618205	79619104	79618205	ID=MS.gene064062.t1;Parent=MS.gene064062
chr6.1	exon	79618205	79619104	79618205	ID=MS.gene064062.t1.exon1;Parent=MS.gene064062.t1
chr6.1	CDS	79618205	79619104	79618205	ID=cds.MS.gene064062.t1;Parent=MS.gene064062.t1

Gene Sequence

>MS.gene064062

ATGGAAGAACCTAAATTCATAATAGAAGCATCAGAAGCAAAATCATTAACCCAATCAACAAACCTAACCCTAACCCAACTCCTTCCCATCATTGTCAAATCATCCCAACCATTAGCCCGTGTCCCTATCTCCAAATTTCACGTTGCCGCCGTCGCTGTTGGAATCTCCGGTCGAATCTTCATCGGCGTCAACGTCGAATTCCCTAACCTTCCTTTCCACCATACCATCCATGCTGAACAGTTTCTCTTAACAAACCTTTTTCATAACAAAGAAACTCAAATTCAATACCTTGCTGTATCCGCTGCACCTTGTGGCCATTGCCGCCAGTTTCTTCAAGAAATCCGTGGCGCCGGAGATATTCCTCTCCTCATAACATCTGATTCGAAGAAAACTGCGAAAAATGAGTTTACATCTCTTTCTGAATTCCTTTCTCATCCCTTTGGTCCTCATGATCTTCTTCCTAAACATGTTCCTCTTCTCTTGGAACCACGTCACAATGATTTGTGTTTTATAGAAATAGAAGGTTCGATCACAAATTCAATAAAGCCACACCTGAAGGATGCAGCACTGAAAGCGGCGAATGAATCACATGCGCCGTACAGTGACTCGCCTTCAGGTGTGGCTTTACTGGATTCACGTGGGAATGTTTATAAAGGTAGTTATATGGAATCTGCAGCTTATAATCCTAGCATGGGACCGGTTCAGGCTGCTTTGGTGGCTTTTATTGTCGGTGCCGGAGACGGTGCGGCGGAGTATGGAGAATTGGTGGAAGCGGTGTTGGTGGAGAAAGAGGATGCGGTGGTGAAACAGGAGGATACGGCAAGGCTGTTTCTTAGGTCCATCGCACCTCAATGTAGCTTCAATGTGGTTCTTTGCACTTCTAATAATAAATCTAATTGA

Protein sequence

>MS.gene064062.t1

MEEPKFIIEASEAKSLTQSTNLTLTQLLPIIVKSSQPLARVPISKFHVAAVAVGISGRIFIGVNVEFPNLPFHHTIHAEQFLLTNLFHNKETQIQYLAVSAAPCGHCRQFLQEIRGAGDIPLLITSDSKKTAKNEFTSLSEFLSHPFGPHDLLPKHVPLLLEPRHNDLCFIEIEGSITNSIKPHLKDAALKAANESHAPYSDSPSGVALLDSRGNVYKGSYMESAAYNPSMGPVQAALVAFIVGAGDGAAEYGELVEAVLVEKEDAVVKQEDTARLFLRSIAPQCSFNVVLCTSNNKSN