Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69607.t1 | AAD03487.1 | 100 | 84 | 0 | 0 | 298 | 381 | 298 | 381 | 6.20E-39 | 171.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69607.t1 | Q00451 | 87.8 | 82 | 9 | 1 | 300 | 380 | 264 | 345 | 3.0e-34 | 147.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69607.t1 | Q40336 | 100.0 | 84 | 0 | 0 | 298 | 381 | 298 | 381 | 4.5e-39 | 171.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049222 | MS.gene69607 | -0.807778 | 4.28E-50 | -1.69E-46 |
MS.gene049298 | MS.gene69607 | 0.85809 | 1.05E-62 | -1.69E-46 |
MS.gene050170 | MS.gene69607 | -0.841277 | 5.24E-58 | -1.69E-46 |
MS.gene050323 | MS.gene69607 | -0.818555 | 1.84E-52 | -1.69E-46 |
MS.gene050338 | MS.gene69607 | 0.808573 | 2.90E-50 | -1.69E-46 |
MS.gene050710 | MS.gene69607 | 0.804489 | 2.11E-49 | -1.69E-46 |
MS.gene050868 | MS.gene69607 | -0.831767 | 1.39E-55 | -1.69E-46 |
MS.gene050871 | MS.gene69607 | -0.83548 | 1.64E-56 | -1.69E-46 |
MS.gene051838 | MS.gene69607 | -0.839966 | 1.15E-57 | -1.69E-46 |
MS.gene051863 | MS.gene69607 | 0.801452 | 8.94E-49 | -1.69E-46 |
MS.gene052169 | MS.gene69607 | 0.820493 | 6.66E-53 | -1.69E-46 |
MS.gene052209 | MS.gene69607 | 0.828773 | 7.46E-55 | -1.69E-46 |
MS.gene052503 | MS.gene69607 | -0.823348 | 1.45E-53 | -1.69E-46 |
MS.gene052823 | MS.gene69607 | -0.828486 | 8.75E-55 | -1.69E-46 |
MS.gene052825 | MS.gene69607 | -0.833724 | 4.52E-56 | -1.69E-46 |
MS.gene053108 | MS.gene69607 | 0.859066 | 5.35E-63 | -1.69E-46 |
MS.gene053203 | MS.gene69607 | -0.809074 | 2.26E-50 | -1.69E-46 |
MS.gene053421 | MS.gene69607 | 0.869976 | 2.07E-66 | -1.69E-46 |
MS.gene053479 | MS.gene69607 | -0.82318 | 1.59E-53 | -1.69E-46 |
MS.gene053480 | MS.gene69607 | -0.81543 | 9.28E-52 | -1.69E-46 |
MS.gene053824 | MS.gene69607 | -0.810667 | 1.03E-50 | -1.69E-46 |
MS.gene054662 | MS.gene69607 | 0.805142 | 1.54E-49 | -1.69E-46 |
MS.gene054706 | MS.gene69607 | 0.830631 | 2.63E-55 | -1.69E-46 |
MS.gene054941 | MS.gene69607 | 0.851597 | 8.00E-61 | -1.69E-46 |
MS.gene055577 | MS.gene69607 | -0.814376 | 1.59E-51 | -1.69E-46 |
MS.gene055787 | MS.gene69607 | 0.803836 | 2.88E-49 | -1.69E-46 |
MS.gene05589 | MS.gene69607 | -0.817752 | 2.80E-52 | -1.69E-46 |
MS.gene055982 | MS.gene69607 | 0.817853 | 2.66E-52 | -1.69E-46 |
MS.gene056046 | MS.gene69607 | -0.80205 | 6.74E-49 | -1.69E-46 |
MS.gene056387 | MS.gene69607 | -0.88862 | 5.02E-73 | -1.69E-46 |
MS.gene056504 | MS.gene69607 | -0.80455 | 2.05E-49 | -1.69E-46 |
MS.gene05652 | MS.gene69607 | 0.817119 | 3.89E-52 | -1.69E-46 |
MS.gene056583 | MS.gene69607 | 0.836905 | 7.11E-57 | -1.69E-46 |
MS.gene056618 | MS.gene69607 | 0.854482 | 1.20E-61 | -1.69E-46 |
MS.gene056688 | MS.gene69607 | 0.810012 | 1.42E-50 | -1.69E-46 |
MS.gene057173 | MS.gene69607 | 0.817302 | 3.54E-52 | -1.69E-46 |
MS.gene057356 | MS.gene69607 | 0.810434 | 1.16E-50 | -1.69E-46 |
MS.gene057367 | MS.gene69607 | 0.828492 | 8.72E-55 | -1.69E-46 |
MS.gene057669 | MS.gene69607 | 0.84118 | 5.56E-58 | -1.69E-46 |
MS.gene057717 | MS.gene69607 | 0.807647 | 4.56E-50 | -1.69E-46 |
MS.gene057857 | MS.gene69607 | -0.808893 | 2.48E-50 | -1.69E-46 |
MS.gene058128 | MS.gene69607 | 0.808337 | 3.25E-50 | -1.69E-46 |
MS.gene058157 | MS.gene69607 | -0.856171 | 3.85E-62 | -1.69E-46 |
MS.gene05837 | MS.gene69607 | -0.80432 | 2.29E-49 | -1.69E-46 |
MS.gene058382 | MS.gene69607 | 0.815758 | 7.85E-52 | -1.69E-46 |
MS.gene058418 | MS.gene69607 | 0.817055 | 4.02E-52 | -1.69E-46 |
MS.gene058838 | MS.gene69607 | -0.804675 | 1.93E-49 | -1.69E-46 |
MS.gene058853 | MS.gene69607 | 0.818005 | 2.46E-52 | -1.69E-46 |
MS.gene059023 | MS.gene69607 | -0.801224 | 9.96E-49 | -1.69E-46 |
MS.gene05926 | MS.gene69607 | 0.853641 | 2.09E-61 | -1.69E-46 |
MS.gene05960 | MS.gene69607 | 0.85099 | 1.19E-60 | -1.69E-46 |
MS.gene059699 | MS.gene69607 | 0.813409 | 2.60E-51 | -1.69E-46 |
MS.gene059703 | MS.gene69607 | 0.811867 | 5.65E-51 | -1.69E-46 |
MS.gene05995 | MS.gene69607 | -0.809403 | 1.93E-50 | -1.69E-46 |
MS.gene05996 | MS.gene69607 | -0.803129 | 4.04E-49 | -1.69E-46 |
MS.gene06000 | MS.gene69607 | -0.838303 | 3.12E-57 | -1.69E-46 |
MS.gene06027 | MS.gene69607 | -0.830065 | 3.62E-55 | -1.69E-46 |
MS.gene060291 | MS.gene69607 | 0.810624 | 1.05E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69607.t1 | MTR_4g101270 | 69.412 | 85 | 26 | 0 | 295 | 379 | 103 | 187 | 2.16e-33 | 123 |
MS.gene69607.t1 | MTR_1g012700 | 46.970 | 132 | 55 | 4 | 249 | 379 | 47 | 164 | 4.91e-24 | 97.4 |
MS.gene69607.t1 | MTR_1g012690 | 51.613 | 93 | 43 | 2 | 288 | 379 | 63 | 154 | 2.52e-23 | 95.5 |
MS.gene69607.t1 | MTR_1g012630 | 51.163 | 86 | 40 | 2 | 295 | 379 | 126 | 210 | 6.93e-22 | 93.2 |
MS.gene69607.t1 | MTR_1g012710 | 55.556 | 81 | 34 | 2 | 300 | 379 | 72 | 151 | 1.44e-21 | 90.5 |
MS.gene69607.t1 | MTR_4g115360 | 62.222 | 90 | 34 | 0 | 290 | 379 | 144 | 233 | 8.90e-19 | 85.1 |
MS.gene69607.t1 | MTR_4g101330 | 48.810 | 84 | 34 | 4 | 300 | 378 | 89 | 168 | 3.87e-18 | 81.6 |
MS.gene69607.t1 | MTR_3g106740 | 49.412 | 85 | 34 | 4 | 300 | 379 | 50 | 130 | 2.74e-16 | 75.1 |
MS.gene69607.t1 | MTR_4g101260 | 45.882 | 85 | 44 | 2 | 296 | 379 | 49 | 132 | 8.98e-16 | 73.9 |
MS.gene69607.t1 | MTR_4g101280 | 47.619 | 84 | 37 | 4 | 300 | 379 | 63 | 143 | 9.73e-16 | 73.9 |
MS.gene69607.t1 | MTR_2g026760 | 45.161 | 93 | 46 | 4 | 287 | 378 | 38 | 126 | 1.05e-15 | 73.6 |
MS.gene69607.t1 | MTR_4g108150 | 43.689 | 103 | 53 | 3 | 278 | 379 | 25 | 123 | 1.40e-15 | 73.2 |
MS.gene69607.t1 | MTR_4g101310 | 46.914 | 81 | 42 | 1 | 300 | 379 | 54 | 134 | 5.78e-14 | 68.9 |
MS.gene69607.t1 | MTR_5g012340 | 39.080 | 87 | 51 | 2 | 293 | 378 | 91 | 176 | 1.31e-12 | 66.2 |
MS.gene69607.t1 | MTR_5g012380 | 37.778 | 90 | 48 | 3 | 293 | 378 | 84 | 169 | 1.91e-12 | 65.5 |
MS.gene69607.t1 | MTR_3g106750 | 48.148 | 81 | 41 | 1 | 300 | 379 | 49 | 129 | 2.01e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69607.t1 | AT3G22142 | 45.013 | 391 | 126 | 17 | 35 | 380 | 1134 | 1480 | 9.51e-58 | 203 |
MS.gene69607.t1 | AT4G15160 | 78.161 | 87 | 17 | 2 | 295 | 379 | 97 | 183 | 1.08e-38 | 137 |
MS.gene69607.t1 | AT2G10940 | 49.049 | 263 | 113 | 10 | 125 | 378 | 39 | 289 | 3.07e-37 | 136 |
MS.gene69607.t1 | AT2G10940 | 49.049 | 263 | 113 | 10 | 125 | 378 | 39 | 289 | 3.07e-37 | 136 |
MS.gene69607.t1 | AT1G62500 | 72.619 | 84 | 23 | 0 | 296 | 379 | 211 | 294 | 4.04e-36 | 134 |
MS.gene69607.t1 | AT4G12490 | 49.462 | 93 | 46 | 1 | 288 | 379 | 90 | 182 | 7.04e-25 | 100 |
MS.gene69607.t1 | AT4G12470 | 53.659 | 82 | 37 | 1 | 299 | 379 | 80 | 161 | 4.85e-23 | 94.7 |
MS.gene69607.t1 | AT4G12480 | 53.659 | 82 | 37 | 1 | 299 | 379 | 87 | 168 | 2.40e-22 | 93.2 |
MS.gene69607.t1 | AT4G12500 | 52.439 | 82 | 38 | 1 | 299 | 379 | 96 | 177 | 2.45e-22 | 93.6 |
MS.gene69607.t1 | AT1G62510 | 50.602 | 83 | 34 | 3 | 300 | 378 | 70 | 149 | 3.66e-18 | 80.9 |
MS.gene69607.t1 | AT1G12100 | 48.235 | 85 | 43 | 1 | 296 | 379 | 48 | 132 | 3.70e-18 | 80.5 |
MS.gene69607.t1 | AT2G45180 | 49.412 | 85 | 41 | 2 | 296 | 379 | 51 | 134 | 2.21e-17 | 78.6 |
MS.gene69607.t1 | AT4G12520 | 48.837 | 86 | 33 | 3 | 300 | 379 | 49 | 129 | 1.11e-16 | 76.3 |
MS.gene69607.t1 | AT4G12510 | 48.837 | 86 | 33 | 3 | 300 | 379 | 49 | 129 | 1.11e-16 | 76.3 |
MS.gene69607.t1 | AT5G46890 | 45.263 | 95 | 43 | 5 | 288 | 379 | 39 | 127 | 1.31e-16 | 76.3 |
MS.gene69607.t1 | AT5G46900 | 47.126 | 87 | 37 | 5 | 296 | 379 | 47 | 127 | 5.06e-16 | 74.3 |
MS.gene69607.t1 | AT4G12530 | 46.591 | 88 | 45 | 2 | 293 | 379 | 30 | 116 | 1.17e-15 | 73.2 |
MS.gene69607.t1 | AT1G12090 | 45.783 | 83 | 38 | 3 | 300 | 378 | 58 | 137 | 1.45e-14 | 70.5 |
MS.gene69607.t1 | AT4G22460 | 40.000 | 115 | 55 | 4 | 272 | 377 | 22 | 131 | 3.25e-14 | 69.7 |
MS.gene69607.t1 | AT4G00165 | 42.718 | 103 | 50 | 4 | 278 | 378 | 33 | 128 | 1.11e-13 | 67.8 |
MS.gene69607.t1 | AT4G00165 | 42.718 | 103 | 50 | 4 | 278 | 378 | 33 | 128 | 1.11e-13 | 67.8 |
MS.gene69607.t1 | AT4G12550 | 36.735 | 98 | 59 | 3 | 284 | 379 | 15 | 111 | 1.60e-12 | 63.9 |
Find 153 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGTGGTGTGTTGGTGGTTT+AGG | 0.101165 | 3.4:-53132908 | None:intergenic |
GGTGGTGTGTTGGTGGTTTA+GGG | 0.179821 | 3.4:-53132907 | None:intergenic |
TTGGGATGATGAGGAGGTTT+TGG | 0.213303 | 3.4:-53133070 | None:intergenic |
ACATGTGGTGGGTGCACTAC+TGG | 0.227597 | 3.4:-53133097 | None:intergenic |
GTGTTGGTGGTTTAGGGCTT+GGG | 0.277482 | 3.4:-53132901 | None:intergenic |
TTTGGAACATGTGGTGGTTT+TGG | 0.297398 | 3.4:-53133052 | None:intergenic |
TGTGTTGGTGGTTTAGGGCT+TGG | 0.305036 | 3.4:-53132902 | None:intergenic |
GGTTTAACAATTGGTGGTTT+TGG | 0.308951 | 3.4:-53133151 | None:intergenic |
GGGCTTGGGTAAGGACAATA+AGG | 0.310531 | 3.4:-53132887 | None:intergenic |
ACAATTGGTGGTTTCACAAT+TGG | 0.325867 | 3.4:-53133475 | None:intergenic |
GGAACATAAGGTGGTGTTAC+AGG | 0.335642 | 3.4:-53133286 | None:intergenic |
GGAACATAAGGTGGTGTTAC+AGG | 0.335642 | 3.4:-53133358 | None:intergenic |
GGTCTCACAACAGGTGGCTT+AGG | 0.336071 | 3.4:-53133235 | None:intergenic |
GGTGGACAAGGTGATGGTTT+AGG | 0.339269 | 3.4:-53133016 | None:intergenic |
ACAATTGGTGGTTTCACAAT+TGG | 0.349052 | 3.4:-53133388 | None:intergenic |
CATGTGGTGGGTGCACTACT+GGG | 0.351022 | 3.4:-53133096 | None:intergenic |
TGCACATAAGGTGGTGTTAC+AGG | 0.351554 | 3.4:-53133532 | None:intergenic |
GGCACATAAGGTGGATGTAC+TGG | 0.360540 | 3.4:-53133130 | None:intergenic |
TGCATATATGATTAATAAGC+TGG | 0.363723 | 3.4:-53133946 | None:intergenic |
TATGGTGGTGGTTTCACAAC+CGG | 0.372564 | 3.4:-53133208 | None:intergenic |
GCTTCAAGGACTTGTTGATT+TGG | 0.376763 | 3.4:+53133801 | MS.gene69607:CDS |
TCCATTGATGCTTTGAAGTT+GGG | 0.377397 | 3.4:+53133703 | MS.gene69607:CDS |
GGTGTTGGTGGTGTTACAAT+AGG | 0.381877 | 3.4:-53133562 | None:intergenic |
ACAGGGACAACTGGTGGTTT+AGG | 0.382129 | 3.4:-53133268 | None:intergenic |
ACAGGGACAACTGGTGGTTT+AGG | 0.382129 | 3.4:-53133340 | None:intergenic |
GGTTTGTGAACTGGTGGTTT+AGG | 0.384230 | 3.4:-53132980 | None:intergenic |
GGTTTCACAATTGGTGGCTT+AGG | 0.387848 | 3.4:-53133379 | None:intergenic |
TGAACTGGTGGCTTAACAAT+AGG | 0.393111 | 3.4:-53132932 | None:intergenic |
GCTGGGCACTTAAACCCTTC+TGG | 0.397405 | 3.4:-53133928 | None:intergenic |
GGTGGTGTTACAGGCACAAC+TGG | 0.421124 | 3.4:-53133523 | None:intergenic |
ACTATTGGAGGTTTAACAAT+TGG | 0.422358 | 3.4:-53133160 | None:intergenic |
TACTTTGGTGGTTTGTGAAC+TGG | 0.426515 | 3.4:-53132947 | None:intergenic |
ACATGTTGTCCATTGCTTCA+AGG | 0.426797 | 3.4:+53133787 | MS.gene69607:CDS |
ATAGGTGGTGGTTGCACATA+AGG | 0.432534 | 3.4:-53133544 | None:intergenic |
CTTCAGGTTCTCATTGATTG+TGG | 0.435240 | 3.4:+53133895 | MS.gene69607:CDS |
TATCTTGGTGGTTTGTGAAC+TGG | 0.440214 | 3.4:-53132989 | None:intergenic |
TGAACTGGTGGTTTAGGAGT+AGG | 0.443038 | 3.4:-53132974 | None:intergenic |
GGTGGTTTAGGGCTTGGGTA+AGG | 0.443106 | 3.4:-53132896 | None:intergenic |
AAGAAGTTTAAGTCTAATAG+TGG | 0.443363 | 3.4:-53133845 | None:intergenic |
ATGGAACATGTTTGTTGTGC+TGG | 0.445283 | 3.4:-53133685 | None:intergenic |
TTCCATTGATGCTTTGAAGT+TGG | 0.447409 | 3.4:+53133702 | MS.gene69607:CDS |
ACCACTGGTGGTGTCACAAT+TGG | 0.450406 | 3.4:-53133592 | None:intergenic |
GCACATAAGGTGGATGTACT+GGG | 0.453867 | 3.4:-53133129 | None:intergenic |
GTTTGTTGTGCTGGTGGTGT+AGG | 0.454264 | 3.4:-53133676 | None:intergenic |
GGTCTCACAACAGGTGGCTT+AGG | 0.454580 | 3.4:-53133307 | None:intergenic |
GGTGGCGGTGATGGTACAAC+TGG | 0.464332 | 3.4:-53133436 | None:intergenic |
ATGGTGGTGGTTTCACAACC+GGG | 0.469584 | 3.4:-53133207 | None:intergenic |
ATTGGAGGTGTTGGTGTTGG+TGG | 0.473389 | 3.4:-53133574 | None:intergenic |
ACGTAAGGTGGATGTACTAT+TGG | 0.473876 | 3.4:-53133175 | None:intergenic |
GATGGTTTAGGAGGATATCT+TGG | 0.475788 | 3.4:-53133004 | None:intergenic |
GGTTTCACAATTGGAGGTGA+TGG | 0.476485 | 3.4:-53133466 | None:intergenic |
ACATAGGGTGGTCTCACAAC+AGG | 0.482961 | 3.4:-53133244 | None:intergenic |
ACATAGGGTGGTCTCACAAC+AGG | 0.482961 | 3.4:-53133316 | None:intergenic |
GGTGGTGTTACAGGGACAAC+TGG | 0.483517 | 3.4:-53133277 | None:intergenic |
GGTGGTGTTACAGGGACAAC+TGG | 0.483517 | 3.4:-53133349 | None:intergenic |
GTCTCACAACAGGTGGCTTA+GGG | 0.489664 | 3.4:-53133234 | None:intergenic |
ATAGGAGGGTGGTGTGTTGG+TGG | 0.491865 | 3.4:-53132914 | None:intergenic |
ATTGGTGGTTTCACAATTGG+TGG | 0.495782 | 3.4:-53133385 | None:intergenic |
ATTGGTGGTTTCACAATTGG+AGG | 0.496030 | 3.4:-53133472 | None:intergenic |
ATTGGAGGTTTAACAATTGG+TGG | 0.498001 | 3.4:-53133157 | None:intergenic |
TTAGGAGTAGGAGAATACTT+TGG | 0.499134 | 3.4:-53132962 | None:intergenic |
GGTGCATGTGTTGATGTGCT+TGG | 0.500450 | 3.4:+53133724 | MS.gene69607:CDS |
ACAGGTGGCTTAGGGACATA+TGG | 0.500670 | 3.4:-53133226 | None:intergenic |
GCTGGTGGTGTAGGTGGATA+AGG | 0.502339 | 3.4:-53133667 | None:intergenic |
GGTGTCACAATTGGAGGTGT+TGG | 0.504887 | 3.4:-53133583 | None:intergenic |
ATTGGAGGTGATGGGACATA+AGG | 0.505977 | 3.4:-53133457 | None:intergenic |
GGTTTAGGAGGATATCTTGG+TGG | 0.512387 | 3.4:-53133001 | None:intergenic |
GGATAAGGTACAAGTGGTGG+TGG | 0.512801 | 3.4:-53133652 | None:intergenic |
CTTGGTGGACTCATACATAT+TGG | 0.516064 | 3.4:+53133742 | MS.gene69607:CDS |
ACATGTGGTGGGAAAACAAT+TGG | 0.519270 | 3.4:-53133403 | None:intergenic |
ATTGGTGGCTTAGGAACATA+AGG | 0.519504 | 3.4:-53133370 | None:intergenic |
ACAATTGGAGGTGTTGGTGT+TGG | 0.522248 | 3.4:-53133577 | None:intergenic |
GGGACATAAGGTGGCGGTGA+TGG | 0.522493 | 3.4:-53133445 | None:intergenic |
TGTTGTGCTGGTGGTGTAGG+TGG | 0.526757 | 3.4:-53133673 | None:intergenic |
GGAGTAGGAGAATACTTTGG+TGG | 0.529075 | 3.4:-53132959 | None:intergenic |
ACAGGTGGCTTAGGAACATA+AGG | 0.531513 | 3.4:-53133298 | None:intergenic |
GGACAAGGTGATGGTTTAGG+AGG | 0.532067 | 3.4:-53133013 | None:intergenic |
GGTGTTTCACTAGGTGGTGT+TGG | 0.533247 | 3.4:-53133622 | None:intergenic |
GGCTTAGGGACATATGGTGG+TGG | 0.534071 | 3.4:-53133220 | None:intergenic |
GGAGGACATGGTGTTTCACT+AGG | 0.536488 | 3.4:-53133631 | None:intergenic |
ACAATAGGAGGGTGGTGTGT+TGG | 0.537158 | 3.4:-53132917 | None:intergenic |
GCATGTGTTGATGTGCTTGG+TGG | 0.537915 | 3.4:+53133727 | MS.gene69607:CDS |
CTCATACATATTGGTATCGG+TGG | 0.543738 | 3.4:+53133751 | MS.gene69607:CDS |
GATGGTACAACTGGAGGTAG+TGG | 0.546745 | 3.4:-53133427 | None:intergenic |
AACTGGTGGTTTAGGTACAT+AGG | 0.546797 | 3.4:-53133260 | None:intergenic |
AACTGGTGGTTTAGGTACAT+AGG | 0.546797 | 3.4:-53133332 | None:intergenic |
ATGTGGTGGGTGCACTACTG+GGG | 0.548341 | 3.4:-53133095 | None:intergenic |
GCAAGCAAGAACATTGAGTA+AGG | 0.548467 | 3.4:-53132864 | None:intergenic |
GTTTCACAATTGGAGGTGAT+GGG | 0.551768 | 3.4:-53133465 | None:intergenic |
GGTGGTGTTACAATAGGTGG+TGG | 0.552132 | 3.4:-53133556 | None:intergenic |
TAAGGTGGATGTACTATTGG+AGG | 0.552788 | 3.4:-53133172 | None:intergenic |
ACAGGCACAACTGGAGGTAG+AGG | 0.553941 | 3.4:-53133514 | None:intergenic |
ACAAGTGGTGGTGGAGGACA+TGG | 0.555606 | 3.4:-53133643 | None:intergenic |
TAAGGTACAAGTGGTGGTGG+AGG | 0.557029 | 3.4:-53133649 | None:intergenic |
TCAACAAGTCCTTGAAGCAA+TGG | 0.557441 | 3.4:-53133796 | None:intergenic |
GGTGTTGGTGGTGTAACCAC+TGG | 0.559606 | 3.4:-53133607 | None:intergenic |
GGAGGTGATGGGACATAAGG+TGG | 0.568088 | 3.4:-53133454 | None:intergenic |
CTTGGTGGTTTGTGAACTGG+TGG | 0.569251 | 3.4:-53132986 | None:intergenic |
ACCTTACGTACCAAAACCCC+CGG | 0.570737 | 3.4:+53133189 | MS.gene69607:CDS |
CAATGAGAACCTGAAGAGCA+AGG | 0.571048 | 3.4:-53133888 | None:intergenic |
GAACATGTTTGTTGTGCTGG+TGG | 0.572842 | 3.4:-53133682 | None:intergenic |
GAACATAAGGTGGTGTTACA+GGG | 0.574230 | 3.4:-53133285 | None:intergenic |
GAACATAAGGTGGTGTTACA+GGG | 0.574230 | 3.4:-53133357 | None:intergenic |
TGGTGGTGGTTTCACAACCG+GGG | 0.576934 | 3.4:-53133206 | None:intergenic |
GCATATATGATTAATAAGCT+GGG | 0.577240 | 3.4:-53133945 | None:intergenic |
TGTGGTGGGTGCACTACTGG+GGG | 0.578476 | 3.4:-53133094 | None:intergenic |
GTTGGTGGTGTTACAATAGG+TGG | 0.578628 | 3.4:-53133559 | None:intergenic |
ACTGGTGGCTTAACAATAGG+AGG | 0.579565 | 3.4:-53132929 | None:intergenic |
ACCCAACTTCAAAGCATCAA+TGG | 0.579869 | 3.4:-53133704 | None:intergenic |
AGGTACTCAAGTTCAAGAGA+AGG | 0.579976 | 3.4:-53132844 | None:intergenic |
GTTTCACTAGGTGGTGTTGG+TGG | 0.580655 | 3.4:-53133619 | None:intergenic |
TTTGGTGGTTTGTGAACTGG+TGG | 0.584308 | 3.4:-53132944 | None:intergenic |
CAAGAGAAGGATGAAAACAT+TGG | 0.585017 | 3.4:-53132831 | None:intergenic |
AATGAGAACCTGAAGAGCAA+GGG | 0.587112 | 3.4:-53133887 | None:intergenic |
GGAGGTAGTGGAACATGTGG+TGG | 0.588460 | 3.4:-53133415 | None:intergenic |
GGACTCATACATATTGGTAT+CGG | 0.594117 | 3.4:+53133748 | MS.gene69607:CDS |
TGTGGCAAAACTCCACCAGA+AGG | 0.594689 | 3.4:+53133913 | MS.gene69607:CDS |
CACATAAGGTGGATGTACTG+GGG | 0.597608 | 3.4:-53133128 | None:intergenic |
ACTGGTGGTTTAGGTACATA+GGG | 0.604382 | 3.4:-53133259 | None:intergenic |
ACTGGTGGTTTAGGTACATA+GGG | 0.604382 | 3.4:-53133331 | None:intergenic |
ACTGGTGGTGTCACAATTGG+AGG | 0.619027 | 3.4:-53133589 | None:intergenic |
GGAGGTAGAGGAACATGTGG+TGG | 0.622203 | 3.4:-53133502 | None:intergenic |
ATGAGAACCTGAAGAGCAAG+GGG | 0.626266 | 3.4:-53133886 | None:intergenic |
TGTGGTGGGAAAACAATTGG+TGG | 0.626847 | 3.4:-53133400 | None:intergenic |
GGCTTGGGTAAGGACAATAA+GGG | 0.629172 | 3.4:-53132886 | None:intergenic |
GAGGTAGTGGAACATGTGGT+GGG | 0.631936 | 3.4:-53133414 | None:intergenic |
GTGGCAAAACTCCACCAGAA+GGG | 0.633657 | 3.4:+53133914 | MS.gene69607:CDS |
GTAGGTGGATAAGGTACAAG+TGG | 0.636320 | 3.4:-53133658 | None:intergenic |
TCCAATTGTGACACCACCAG+TGG | 0.639965 | 3.4:+53133591 | MS.gene69607:CDS |
GGGCACTTAAACCCTTCTGG+TGG | 0.641808 | 3.4:-53133925 | None:intergenic |
GGTGTTACAGGGACAACTGG+TGG | 0.641906 | 3.4:-53133274 | None:intergenic |
GGTGTTACAGGGACAACTGG+TGG | 0.641906 | 3.4:-53133346 | None:intergenic |
GGCGGTGATGGTACAACTGG+AGG | 0.645853 | 3.4:-53133433 | None:intergenic |
GGTGGATAAGGTACAAGTGG+TGG | 0.651301 | 3.4:-53133655 | None:intergenic |
CTGGTGGCTTAACAATAGGA+GGG | 0.675325 | 3.4:-53132928 | None:intergenic |
GGTGATGGGACATAAGGTGG+CGG | 0.678831 | 3.4:-53133451 | None:intergenic |
GGTGGTGGTTGCACATAAGG+TGG | 0.679674 | 3.4:-53133541 | None:intergenic |
GGACATGGTGTTTCACTAGG+TGG | 0.681972 | 3.4:-53133628 | None:intergenic |
TAGGGTGGTCTCACAACAGG+TGG | 0.682111 | 3.4:-53133241 | None:intergenic |
TAGGGTGGTCTCACAACAGG+TGG | 0.682111 | 3.4:-53133313 | None:intergenic |
GGTGTTACAGGCACAACTGG+AGG | 0.684392 | 3.4:-53133520 | None:intergenic |
GGTGGTGGTTTCACAACCGG+GGG | 0.687563 | 3.4:-53133205 | None:intergenic |
ACATAAGGTGGATGTACTGG+GGG | 0.689428 | 3.4:-53133127 | None:intergenic |
GGTGGCTTAGGGACATATGG+TGG | 0.693700 | 3.4:-53133223 | None:intergenic |
GGTGGCTTAGGAACATAAGG+TGG | 0.699096 | 3.4:-53133367 | None:intergenic |
ACTGGAGGTAGAGGAACATG+TGG | 0.699937 | 3.4:-53133505 | None:intergenic |
GTTGGTGGTGTAACCACTGG+TGG | 0.706491 | 3.4:-53133604 | None:intergenic |
GGTGGCTTAGGAACATAAGG+TGG | 0.709677 | 3.4:-53133295 | None:intergenic |
GTGGCTTAACAATAGGAGGG+TGG | 0.714929 | 3.4:-53132925 | None:intergenic |
GGTGGTTTAGGTACATAGGG+TGG | 0.730445 | 3.4:-53133256 | None:intergenic |
GGTGGTTTAGGTACATAGGG+TGG | 0.730445 | 3.4:-53133328 | None:intergenic |
ACTGGAGGTAGTGGAACATG+TGG | 0.746997 | 3.4:-53133418 | None:intergenic |
TGAGAACCTGAAGAGCAAGG+GGG | 0.789043 | 3.4:-53133885 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAGAAGTTTAAGTCTAATAG+TGG | - | chr3.4:53133848-53133867 | None:intergenic | 25.0% |
ACTATTGGAGGTTTAACAAT+TGG | - | chr3.4:53133163-53133182 | None:intergenic | 30.0% | |
ATTGGAGGTTTAACAATTGG+TGG | - | chr3.4:53133160-53133179 | None:intergenic | 35.0% | |
CAAGAGAAGGATGAAAACAT+TGG | - | chr3.4:53132834-53132853 | None:intergenic | 35.0% | |
GGACTCATACATATTGGTAT+CGG | + | chr3.4:53133748-53133767 | MS.gene69607:CDS | 35.0% | |
TTAGGAGTAGGAGAATACTT+TGG | - | chr3.4:53132965-53132984 | None:intergenic | 35.0% | |
! | ACAATTGGTGGTTTCACAAT+TGG | - | chr3.4:53133391-53133410 | None:intergenic | 35.0% |
! | ACATGTGGTGGAAAAACAAT+TGG | - | chr3.4:53133493-53133512 | None:intergenic | 35.0% |
!! | GGTTTAACAATTGGTGGTTT+TGG | - | chr3.4:53133154-53133173 | None:intergenic | 35.0% |
!! | TCCATTGATGCTTTGAAGTT+GGG | + | chr3.4:53133703-53133722 | MS.gene69607:CDS | 35.0% |
!! | TTCCATTGATGCTTTGAAGT+TGG | + | chr3.4:53133702-53133721 | MS.gene69607:CDS | 35.0% |
AACTGGTGGTTTAGGTACAT+AGG | - | chr3.4:53133263-53133282 | None:intergenic | 40.0% | |
AATGAGAACCTGAAGAGCAA+GGG | - | chr3.4:53133890-53133909 | None:intergenic | 40.0% | |
ACATGTTGTCCATTGCTTCA+AGG | + | chr3.4:53133787-53133806 | MS.gene69607:CDS | 40.0% | |
ACGTAAGGTGGATGTACTAT+TGG | - | chr3.4:53133178-53133197 | None:intergenic | 40.0% | |
ACTGGTGGTTTAGGTACATA+GGG | - | chr3.4:53133262-53133281 | None:intergenic | 40.0% | |
AGGTACTCAAGTTCAAGAGA+AGG | - | chr3.4:53132847-53132866 | None:intergenic | 40.0% | |
GATGGTTTAGGAGGATATCT+TGG | - | chr3.4:53133007-53133026 | None:intergenic | 40.0% | |
GCAAGCAAGAACATTGAGTA+AGG | - | chr3.4:53132867-53132886 | None:intergenic | 40.0% | |
GTTTCACAATTGGAGGTGAT+GGG | - | chr3.4:53133468-53133487 | None:intergenic | 40.0% | |
TAAGGTGGATGTACTATTGG+AGG | - | chr3.4:53133175-53133194 | None:intergenic | 40.0% | |
TCAACAAGTCCTTGAAGCAA+TGG | - | chr3.4:53133799-53133818 | None:intergenic | 40.0% | |
TGAACTGGTGGCTTAACAAT+AGG | - | chr3.4:53132935-53132954 | None:intergenic | 40.0% | |
! | ACATGTGGTGGGAAAACAAT+TGG | - | chr3.4:53133406-53133425 | None:intergenic | 40.0% |
! | ACCCAACTTCAAAGCATCAA+TGG | - | chr3.4:53133707-53133726 | None:intergenic | 40.0% |
! | ATTGGTGGCTTAGGAACATA+AGG | - | chr3.4:53133373-53133392 | None:intergenic | 40.0% |
! | ATTGGTGGTTTCACAATTGG+AGG | - | chr3.4:53133388-53133407 | None:intergenic | 40.0% |
! | ATTGGTGGTTTCACAATTGG+TGG | - | chr3.4:53133388-53133407 | None:intergenic | 40.0% |
! | CTCATACATATTGGTATCGG+TGG | + | chr3.4:53133751-53133770 | MS.gene69607:CDS | 40.0% |
! | CTTCAGGTTCTCATTGATTG+TGG | + | chr3.4:53133895-53133914 | MS.gene69607:CDS | 40.0% |
! | TACTTTGGTGGTTTGTGAAC+TGG | - | chr3.4:53132950-53132969 | None:intergenic | 40.0% |
! | TATCTTGGTGGTTTGTGAAC+TGG | - | chr3.4:53132992-53133011 | None:intergenic | 40.0% |
! | TGTGGTGGAAAAACAATTGG+TGG | - | chr3.4:53133490-53133509 | None:intergenic | 40.0% |
!! | ATGGAACATGTTTGTTGTGC+TGG | - | chr3.4:53133688-53133707 | None:intergenic | 40.0% |
!! | CTTGGTGGACTCATACATAT+TGG | + | chr3.4:53133742-53133761 | MS.gene69607:CDS | 40.0% |
!! | GAACATAAGGTGGTGTTACA+GGG | - | chr3.4:53133288-53133307 | None:intergenic | 40.0% |
!! | GCTTCAAGGACTTGTTGATT+TGG | + | chr3.4:53133801-53133820 | MS.gene69607:CDS | 40.0% |
!! | TTTGGAACATGTGGTGGTTT+TGG | - | chr3.4:53133055-53133074 | None:intergenic | 40.0% |
!!! | ATTGGTGGTTTTGGCACATA+AGG | - | chr3.4:53133145-53133164 | None:intergenic | 40.0% |
!!! | GTGGTTTTGGTGTTGATGAT+GGG | - | chr3.4:53133042-53133061 | None:intergenic | 40.0% |
!!! | TGGTTTTGGTGTTGATGATG+GGG | - | chr3.4:53133041-53133060 | None:intergenic | 40.0% |
ACAGGTGGCTTAGGAACATA+AGG | - | chr3.4:53133301-53133320 | None:intergenic | 45.0% | |
ACATAAGGTGGATGTACTGG+GGG | - | chr3.4:53133130-53133149 | None:intergenic | 45.0% | |
ACTGGTGGCTTAACAATAGG+AGG | - | chr3.4:53132932-53132951 | None:intergenic | 45.0% | |
ATGAGAACCTGAAGAGCAAG+GGG | - | chr3.4:53133889-53133908 | None:intergenic | 45.0% | |
CAATGAGAACCTGAAGAGCA+AGG | - | chr3.4:53133891-53133910 | None:intergenic | 45.0% | |
CACATAAGGTGGATGTACTG+GGG | - | chr3.4:53133131-53133150 | None:intergenic | 45.0% | |
CTGGTGGCTTAACAATAGGA+GGG | - | chr3.4:53132931-53132950 | None:intergenic | 45.0% | |
GCACATAAGGTGGATGTACT+GGG | - | chr3.4:53133132-53133151 | None:intergenic | 45.0% | |
GGAGTAGGAGAATACTTTGG+TGG | - | chr3.4:53132962-53132981 | None:intergenic | 45.0% | |
GGCTTGGGTAAGGACAATAA+GGG | - | chr3.4:53132889-53132908 | None:intergenic | 45.0% | |
GGTTTAGGAGGATATCTTGG+TGG | - | chr3.4:53133004-53133023 | None:intergenic | 45.0% | |
GGTTTCACAATTGGAGGTGA+TGG | - | chr3.4:53133469-53133488 | None:intergenic | 45.0% | |
GGTTTGTGAACTGGTGGTTT+AGG | - | chr3.4:53132983-53133002 | None:intergenic | 45.0% | |
GTAGGTGGATAAGGTACAAG+TGG | - | chr3.4:53133661-53133680 | None:intergenic | 45.0% | |
TGAACTGGTGGTTTAGGAGT+AGG | - | chr3.4:53132977-53132996 | None:intergenic | 45.0% | |
! | ATAGGTGGTGGTTGCACATA+AGG | - | chr3.4:53133547-53133566 | None:intergenic | 45.0% |
! | GGTTTCACAATTGGTGGCTT+AGG | - | chr3.4:53133382-53133401 | None:intergenic | 45.0% |
! | TGTGGTGGGAAAACAATTGG+TGG | - | chr3.4:53133403-53133422 | None:intergenic | 45.0% |
! | TTGGGATGATGAGGAGGTTT+TGG | - | chr3.4:53133073-53133092 | None:intergenic | 45.0% |
! | TTTGGTGGTTTGTGAACTGG+TGG | - | chr3.4:53132947-53132966 | None:intergenic | 45.0% |
!! | ACAATTGGAGGTGTTGGTGT+TGG | - | chr3.4:53133580-53133599 | None:intergenic | 45.0% |
!! | ATTGGAGGTGATGGGACATA+AGG | - | chr3.4:53133460-53133479 | None:intergenic | 45.0% |
!! | GAACATGTTTGTTGTGCTGG+TGG | - | chr3.4:53133685-53133704 | None:intergenic | 45.0% |
!! | GGAACATAAGGTGGTGTTAC+AGG | - | chr3.4:53133289-53133308 | None:intergenic | 45.0% |
!! | GGTGTTGGTGGTGTTACAAT+AGG | - | chr3.4:53133565-53133584 | None:intergenic | 45.0% |
!! | GTTGGTGGTGTTACAATAGG+TGG | - | chr3.4:53133562-53133581 | None:intergenic | 45.0% |
!! | TATGGTGGTGGTTTCACAAC+CGG | - | chr3.4:53133211-53133230 | None:intergenic | 45.0% |
!! | TGCACATAAGGTGGTGTTAC+AGG | - | chr3.4:53133535-53133554 | None:intergenic | 45.0% |
!!! | GGTGGTTTTGGTGTTGATGA+TGG | - | chr3.4:53133043-53133062 | None:intergenic | 45.0% |
!!! | GGTTTTGGTGTTGATGATGG+GGG | - | chr3.4:53133040-53133059 | None:intergenic | 45.0% |
!!! | TGAGGAGGTTTTGGAACATG+TGG | - | chr3.4:53133064-53133083 | None:intergenic | 45.0% |
ACAATAGGAGGGTGGTGTGT+TGG | - | chr3.4:53132920-53132939 | None:intergenic | 50.0% | |
ACAGGGACAACTGGTGGTTT+AGG | - | chr3.4:53133271-53133290 | None:intergenic | 50.0% | |
ACAGGTGGCTTAGGGACATA+TGG | - | chr3.4:53133229-53133248 | None:intergenic | 50.0% | |
ACATAGGGTGGTCTCACAAC+AGG | - | chr3.4:53133247-53133266 | None:intergenic | 50.0% | |
ACCTTACGTACCAAAACCCC+CGG | + | chr3.4:53133189-53133208 | MS.gene69607:CDS | 50.0% | |
ACTGGAGGTAGAGGAACATG+TGG | - | chr3.4:53133508-53133527 | None:intergenic | 50.0% | |
GATGGTACAACTGGAGGTAG+TGG | - | chr3.4:53133430-53133449 | None:intergenic | 50.0% | |
GGACATGGTGTTTCACTAGG+TGG | - | chr3.4:53133631-53133650 | None:intergenic | 50.0% | |
GGAGGACATGGTGTTTCACT+AGG | - | chr3.4:53133634-53133653 | None:intergenic | 50.0% | |
GGATAAGGTACAAGTGGTGG+TGG | - | chr3.4:53133655-53133674 | None:intergenic | 50.0% | |
GGCACATAAGGTGGATGTAC+TGG | - | chr3.4:53133133-53133152 | None:intergenic | 50.0% | |
GGGCTTGGGTAAGGACAATA+AGG | - | chr3.4:53132890-53132909 | None:intergenic | 50.0% | |
GGTGGATAAGGTACAAGTGG+TGG | - | chr3.4:53133658-53133677 | None:intergenic | 50.0% | |
GGTGGCTTAGGAACATAAGG+TGG | - | chr3.4:53133298-53133317 | None:intergenic | 50.0% | |
GGTGGTTTAGGTACATAGGG+TGG | - | chr3.4:53133259-53133278 | None:intergenic | 50.0% | |
GGTGTTTCACTAGGTGGTGT+TGG | - | chr3.4:53133625-53133644 | None:intergenic | 50.0% | |
GTCTCACAACAGGTGGCTTA+GGG | - | chr3.4:53133237-53133256 | None:intergenic | 50.0% | |
GTGGCAAAACTCCACCAGAA+GGG | + | chr3.4:53133914-53133933 | MS.gene69607:CDS | 50.0% | |
GTGGCTTAACAATAGGAGGG+TGG | - | chr3.4:53132928-53132947 | None:intergenic | 50.0% | |
TCCAATTGTGACACCACCAG+TGG | + | chr3.4:53133591-53133610 | MS.gene69607:CDS | 50.0% | |
TGAGAACCTGAAGAGCAAGG+GGG | - | chr3.4:53133888-53133907 | None:intergenic | 50.0% | |
TGTGGCAAAACTCCACCAGA+AGG | + | chr3.4:53133913-53133932 | MS.gene69607:CDS | 50.0% | |
TGTTATCCCCCTTGCTCTTC+AGG | + | chr3.4:53133879-53133898 | MS.gene69607:CDS | 50.0% | |
! | CTTGGTGGTTTGTGAACTGG+TGG | - | chr3.4:53132989-53133008 | None:intergenic | 50.0% |
! | GCATGTGTTGATGTGCTTGG+TGG | + | chr3.4:53133727-53133746 | MS.gene69607:CDS | 50.0% |
! | GGACAAGGTGATGGTTTAGG+AGG | - | chr3.4:53133016-53133035 | None:intergenic | 50.0% |
! | GGTGCATGTGTTGATGTGCT+TGG | + | chr3.4:53133724-53133743 | MS.gene69607:CDS | 50.0% |
! | GGTGGACAAGGTGATGGTTT+AGG | - | chr3.4:53133019-53133038 | None:intergenic | 50.0% |
! | GGTGTCACAATTGGAGGTGT+TGG | - | chr3.4:53133586-53133605 | None:intergenic | 50.0% |
! | GTTTCACTAGGTGGTGTTGG+TGG | - | chr3.4:53133622-53133641 | None:intergenic | 50.0% |
!! | ACCACTGGTGGTGTCACAAT+TGG | - | chr3.4:53133595-53133614 | None:intergenic | 50.0% |
!! | ACTGGAGGTAGTGGAACATG+TGG | - | chr3.4:53133421-53133440 | None:intergenic | 50.0% |
!! | ACTGGTGGTGTCACAATTGG+AGG | - | chr3.4:53133592-53133611 | None:intergenic | 50.0% |
!! | ATGGTGGTGGTTTCACAACC+GGG | - | chr3.4:53133210-53133229 | None:intergenic | 50.0% |
!! | ATTGGAGGTGTTGGTGTTGG+TGG | - | chr3.4:53133577-53133596 | None:intergenic | 50.0% |
!! | GAGGTAGTGGAACATGTGGT+GGG | - | chr3.4:53133417-53133436 | None:intergenic | 50.0% |
!! | GGTGGTGTGTTGGTGGTTTA+GGG | - | chr3.4:53132910-53132929 | None:intergenic | 50.0% |
!! | GGTGGTGTTACAATAGGTGG+TGG | - | chr3.4:53133559-53133578 | None:intergenic | 50.0% |
!! | GTGTTGGTGGTTTAGGGCTT+GGG | - | chr3.4:53132904-53132923 | None:intergenic | 50.0% |
!! | GTTTGTTGTGCTGGTGGTGT+AGG | - | chr3.4:53133679-53133698 | None:intergenic | 50.0% |
!! | TAAGGTACAAGTGGTGGTGG+AGG | - | chr3.4:53133652-53133671 | None:intergenic | 50.0% |
!! | TGTGTTGGTGGTTTAGGGCT+TGG | - | chr3.4:53132905-53132924 | None:intergenic | 50.0% |
!! | TTTGGTGTTGATGATGGGGG+TGG | - | chr3.4:53133037-53133056 | None:intergenic | 50.0% |
!!! | ACTGGGGGTTTTGGAACATG+TGG | - | chr3.4:53133115-53133134 | None:intergenic | 50.0% |
!!! | GGAGGTTTTGGAACATGTGG+TGG | - | chr3.4:53133061-53133080 | None:intergenic | 50.0% |
!!! | GGGGTTTTGGAACATGTGGT+GGG | - | chr3.4:53133111-53133130 | None:intergenic | 50.0% |
!!! | GGTGGTTTTGGCACATAAGG+TGG | - | chr3.4:53133142-53133161 | None:intergenic | 50.0% |
ACAGGCACAACTGGAGGTAG+AGG | - | chr3.4:53133517-53133536 | None:intergenic | 55.0% | |
ATAGGAGGGTGGTGTGTTGG+TGG | - | chr3.4:53132917-53132936 | None:intergenic | 55.0% | |
GCTGGGCACTTAAACCCTTC+TGG | - | chr3.4:53133931-53133950 | None:intergenic | 55.0% | |
GGAGGTAGAGGAACATGTGG+TGG | - | chr3.4:53133505-53133524 | None:intergenic | 55.0% | |
GGCTTAGGGACATATGGTGG+TGG | - | chr3.4:53133223-53133242 | None:intergenic | 55.0% | |
GGGCACTTAAACCCTTCTGG+TGG | - | chr3.4:53133928-53133947 | None:intergenic | 55.0% | |
GGTCTCACAACAGGTGGCTT+AGG | - | chr3.4:53133238-53133257 | None:intergenic | 55.0% | |
GGTGGCTTAGGGACATATGG+TGG | - | chr3.4:53133226-53133245 | None:intergenic | 55.0% | |
TAGGGTGGTCTCACAACAGG+TGG | - | chr3.4:53133244-53133263 | None:intergenic | 55.0% | |
! | ACTGGGGGTTTGGGATGATG+AGG | - | chr3.4:53133082-53133101 | None:intergenic | 55.0% |
! | GCTGGTGGTGTAGGTGGATA+AGG | - | chr3.4:53133670-53133689 | None:intergenic | 55.0% |
! | GGTGGATGTACTGGGGGTTT+TGG | - | chr3.4:53133124-53133143 | None:intergenic | 55.0% |
! | GGTGGTGGTTGCACATAAGG+TGG | - | chr3.4:53133544-53133563 | None:intergenic | 55.0% |
! | GGTGGTTTAGGGCTTGGGTA+AGG | - | chr3.4:53132899-53132918 | None:intergenic | 55.0% |
! | GGTGTTACAGGCACAACTGG+AGG | - | chr3.4:53133523-53133542 | None:intergenic | 55.0% |
! | GGTGTTACAGGGACAACTGG+TGG | - | chr3.4:53133277-53133296 | None:intergenic | 55.0% |
! | GGTTTCACAACCGGGGGTTT+TGG | - | chr3.4:53133202-53133221 | None:intergenic | 55.0% |
! | TGTTGTGCTGGTGGTGTAGG+TGG | - | chr3.4:53133676-53133695 | None:intergenic | 55.0% |
!! | ACAAGTGGTGGTGGAGGACA+TGG | - | chr3.4:53133646-53133665 | None:intergenic | 55.0% |
!! | ACATGTGGTGGGTGCACTAC+TGG | - | chr3.4:53133100-53133119 | None:intergenic | 55.0% |
!! | ACCGGGGGTTTTGGTACGTA+AGG | - | chr3.4:53133193-53133212 | None:intergenic | 55.0% |
!! | ATGTGGTGGGTGCACTACTG+GGG | - | chr3.4:53133098-53133117 | None:intergenic | 55.0% |
!! | CATGTGGTGGGTGCACTACT+GGG | - | chr3.4:53133099-53133118 | None:intergenic | 55.0% |
!! | GGAGGTAGTGGAACATGTGG+TGG | - | chr3.4:53133418-53133437 | None:intergenic | 55.0% |
!! | GGAGGTGATGGGACATAAGG+TGG | - | chr3.4:53133457-53133476 | None:intergenic | 55.0% |
!! | GGGGGTTTTGGTACGTAAGG+TGG | - | chr3.4:53133190-53133209 | None:intergenic | 55.0% |
!! | GGGTGGTGTGTTGGTGGTTT+AGG | - | chr3.4:53132911-53132930 | None:intergenic | 55.0% |
!! | GGTGATGGGACATAAGGTGG+CGG | - | chr3.4:53133454-53133473 | None:intergenic | 55.0% |
!! | GGTGGTGTTACAGGCACAAC+TGG | - | chr3.4:53133526-53133545 | None:intergenic | 55.0% |
!! | GGTGGTGTTACAGGGACAAC+TGG | - | chr3.4:53133280-53133299 | None:intergenic | 55.0% |
!! | GGTGTTGGTGGTGTAACCAC+TGG | - | chr3.4:53133610-53133629 | None:intergenic | 55.0% |
!! | GTTGATGATGGGGGTGGACA+AGG | - | chr3.4:53133031-53133050 | None:intergenic | 55.0% |
!! | GTTGGTGGTGTAACCACTGG+TGG | - | chr3.4:53133607-53133626 | None:intergenic | 55.0% |
!! | TGGTGGTGGTTTCACAACCG+GGG | - | chr3.4:53133209-53133228 | None:intergenic | 55.0% |
!!! | GGGGGTTTTGGAACATGTGG+TGG | - | chr3.4:53133112-53133131 | None:intergenic | 55.0% |
GATGGGGGTGGACAAGGTGA+TGG | - | chr3.4:53133025-53133044 | None:intergenic | 60.0% | |
GGGTGCACTACTGGGGGTTT+GGG | - | chr3.4:53133091-53133110 | None:intergenic | 60.0% | |
TGGGTGCACTACTGGGGGTT+TGG | - | chr3.4:53133092-53133111 | None:intergenic | 60.0% | |
! | GGCGGTGATGGTACAACTGG+AGG | - | chr3.4:53133436-53133455 | None:intergenic | 60.0% |
! | GGGACATAAGGTGGCGGTGA+TGG | - | chr3.4:53133448-53133467 | None:intergenic | 60.0% |
! | GGGGGTTTGGGATGATGAGG+AGG | - | chr3.4:53133079-53133098 | None:intergenic | 60.0% |
! | GGTGGCGGTGATGGTACAAC+TGG | - | chr3.4:53133439-53133458 | None:intergenic | 60.0% |
! | GGTGGTGGTTTCACAACCGG+GGG | - | chr3.4:53133208-53133227 | None:intergenic | 60.0% |
!! | TGTGGTGGGTGCACTACTGG+GGG | - | chr3.4:53133097-53133116 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 53132812 | 53133957 | 53132812 | ID=MS.gene69607 |
chr3.4 | mRNA | 53132812 | 53133957 | 53132812 | ID=MS.gene69607.t1;Parent=MS.gene69607 |
chr3.4 | exon | 53132812 | 53133957 | 53132812 | ID=MS.gene69607.t1.exon1;Parent=MS.gene69607.t1 |
chr3.4 | CDS | 53132812 | 53133957 | 53132812 | ID=cds.MS.gene69607.t1;Parent=MS.gene69607.t1 |
Gene Sequence |
Protein sequence |