Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58060.t1 | XP_003609440.1 | 98.3 | 292 | 5 | 0 | 1 | 292 | 1 | 292 | 1.90E-157 | 565.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58060.t1 | Q8H124 | 73.0 | 270 | 65 | 3 | 22 | 289 | 14 | 277 | 3.3e-105 | 382.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58060.t1 | G7JFG1 | 98.3 | 292 | 5 | 0 | 1 | 292 | 1 | 292 | 1.4e-157 | 565.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene58060 | 0.892119 | 2.13E-74 | -1.69E-46 |
| MS.gene049173 | MS.gene58060 | 0.823049 | 1.71E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene58060 | 0.83436 | 3.14E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene58060 | 0.852079 | 5.84E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene58060 | 0.803157 | 3.99E-49 | -1.69E-46 |
| MS.gene049259 | MS.gene58060 | -0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene049281 | MS.gene58060 | -0.805496 | 1.30E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene58060 | 0.863867 | 1.83E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene58060 | 0.845067 | 5.12E-59 | -1.69E-46 |
| MS.gene04939 | MS.gene58060 | 0.814492 | 1.50E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene58060 | 0.815158 | 1.07E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene58060 | 0.890736 | 7.52E-74 | -1.69E-46 |
| MS.gene049634 | MS.gene58060 | -0.839134 | 1.90E-57 | -1.69E-46 |
| MS.gene049865 | MS.gene58060 | 0.804866 | 1.76E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene58060 | -0.836295 | 1.02E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene58060 | 0.800899 | 1.16E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene58060 | 0.853034 | 3.12E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene58060 | 0.872406 | 3.26E-67 | -1.69E-46 |
| MS.gene050170 | MS.gene58060 | 0.85719 | 1.93E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene58060 | 0.870757 | 1.15E-66 | -1.69E-46 |
| MS.gene050333 | MS.gene58060 | 0.873581 | 1.32E-67 | -1.69E-46 |
| MS.gene050338 | MS.gene58060 | -0.872327 | 3.46E-67 | -1.69E-46 |
| MS.gene050381 | MS.gene58060 | -0.809028 | 2.32E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene58060 | 0.878858 | 2.00E-69 | -1.69E-46 |
| MS.gene050496 | MS.gene58060 | 0.859058 | 5.38E-63 | -1.69E-46 |
| MS.gene050504 | MS.gene58060 | 0.861616 | 9.05E-64 | -1.69E-46 |
| MS.gene050518 | MS.gene58060 | 0.839118 | 1.92E-57 | -1.69E-46 |
| MS.gene050538 | MS.gene58060 | 0.809094 | 2.24E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene58060 | 0.842893 | 1.96E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene58060 | 0.896913 | 2.33E-76 | -1.69E-46 |
| MS.gene050675 | MS.gene58060 | 0.85984 | 3.13E-63 | -1.69E-46 |
| MS.gene050699 | MS.gene58060 | 0.836761 | 7.74E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene58060 | 0.806763 | 7.02E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene58060 | 0.834045 | 3.76E-56 | -1.69E-46 |
| MS.gene05079 | MS.gene58060 | -0.846652 | 1.90E-59 | -1.69E-46 |
| MS.gene050809 | MS.gene58060 | -0.838886 | 2.20E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene58060 | 0.875141 | 3.89E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene58060 | 0.848851 | 4.71E-60 | -1.69E-46 |
| MS.gene050833 | MS.gene58060 | -0.802881 | 4.54E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene58060 | 0.863591 | 2.23E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene58060 | 0.860079 | 2.65E-63 | -1.69E-46 |
| MS.gene050876 | MS.gene58060 | 0.826519 | 2.60E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene58060 | 0.871466 | 6.69E-67 | -1.69E-46 |
| MS.gene050950 | MS.gene58060 | 0.807202 | 5.67E-50 | -1.69E-46 |
| MS.gene05096 | MS.gene58060 | -0.8047 | 1.90E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene58060 | 0.836554 | 8.74E-57 | -1.69E-46 |
| MS.gene051044 | MS.gene58060 | -0.811704 | 6.13E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene58060 | -0.814802 | 1.28E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene58060 | -0.802374 | 5.78E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene58060 | -0.881889 | 1.65E-70 | -1.69E-46 |
| MS.gene051228 | MS.gene58060 | 0.816557 | 5.20E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene58060 | 0.829397 | 5.27E-55 | -1.69E-46 |
| MS.gene051317 | MS.gene58060 | 0.876039 | 1.92E-68 | -1.69E-46 |
| MS.gene051364 | MS.gene58060 | -0.821467 | 3.98E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene58060 | -0.824717 | 6.94E-54 | -1.69E-46 |
| MS.gene051422 | MS.gene58060 | -0.817572 | 3.08E-52 | -1.69E-46 |
| MS.gene051617 | MS.gene58060 | 0.843108 | 1.72E-58 | -1.69E-46 |
| MS.gene051651 | MS.gene58060 | -0.871145 | 8.54E-67 | -1.69E-46 |
| MS.gene051666 | MS.gene58060 | 0.800112 | 1.68E-48 | -1.69E-46 |
| MS.gene051734 | MS.gene58060 | 0.821456 | 4.00E-53 | -1.69E-46 |
| MS.gene051749 | MS.gene58060 | -0.831831 | 1.34E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene58060 | 0.842806 | 2.06E-58 | -1.69E-46 |
| MS.gene051838 | MS.gene58060 | 0.831946 | 1.25E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene58060 | 0.81621 | 6.22E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene58060 | 0.841511 | 4.55E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene58060 | 0.839831 | 1.25E-57 | -1.69E-46 |
| MS.gene052129 | MS.gene58060 | -0.878089 | 3.72E-69 | -1.69E-46 |
| MS.gene052164 | MS.gene58060 | 0.830832 | 2.35E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene58060 | 0.830265 | 3.24E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene58060 | 0.833973 | 3.92E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene58060 | 0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene58060 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene052606 | MS.gene58060 | -0.832353 | 9.92E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene58060 | 0.803852 | 2.86E-49 | -1.69E-46 |
| MS.gene052805 | MS.gene58060 | -0.80139 | 9.21E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene58060 | 0.821817 | 3.30E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene58060 | 0.862331 | 5.47E-64 | -1.69E-46 |
| MS.gene052872 | MS.gene58060 | 0.88277 | 7.88E-71 | -1.69E-46 |
| MS.gene052916 | MS.gene58060 | 0.811083 | 8.36E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene58060 | 0.848768 | 4.97E-60 | -1.69E-46 |
| MS.gene053203 | MS.gene58060 | 0.836255 | 1.04E-56 | -1.69E-46 |
| MS.gene053284 | MS.gene58060 | 0.864372 | 1.28E-64 | -1.69E-46 |
| MS.gene053285 | MS.gene58060 | 0.848908 | 4.54E-60 | -1.69E-46 |
| MS.gene053420 | MS.gene58060 | -0.836015 | 1.20E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene58060 | 0.851475 | 8.67E-61 | -1.69E-46 |
| MS.gene053561 | MS.gene58060 | -0.810498 | 1.12E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene58060 | 0.803247 | 3.82E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene58060 | 0.807207 | 5.66E-50 | -1.69E-46 |
| MS.gene053776 | MS.gene58060 | -0.805299 | 1.43E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene58060 | 0.865546 | 5.46E-65 | -1.69E-46 |
| MS.gene053887 | MS.gene58060 | -0.80614 | 9.51E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene58060 | 0.832282 | 1.03E-55 | -1.69E-46 |
| MS.gene054056 | MS.gene58060 | -0.802326 | 5.92E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene58060 | 0.815601 | 8.50E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene58060 | 0.807379 | 5.20E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene58060 | 0.817046 | 4.04E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene58060 | 0.849201 | 3.76E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene58060 | -0.828659 | 7.95E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene58060 | 0.863923 | 1.76E-64 | -1.69E-46 |
| MS.gene054884 | MS.gene58060 | -0.850894 | 1.26E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene58060 | 0.817923 | 2.56E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene58060 | 0.861996 | 6.93E-64 | -1.69E-46 |
| MS.gene054959 | MS.gene58060 | -0.815837 | 7.53E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene58060 | -0.8066 | 7.60E-50 | -1.69E-46 |
| MS.gene055158 | MS.gene58060 | -0.804695 | 1.91E-49 | -1.69E-46 |
| MS.gene055202 | MS.gene58060 | -0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene055206 | MS.gene58060 | 0.844098 | 9.33E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene58060 | 0.819646 | 1.04E-52 | -1.69E-46 |
| MS.gene055251 | MS.gene58060 | -0.814928 | 1.20E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene58060 | 0.839871 | 1.22E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene58060 | 0.869954 | 2.10E-66 | -1.69E-46 |
| MS.gene055577 | MS.gene58060 | 0.883089 | 6.03E-71 | -1.69E-46 |
| MS.gene055729 | MS.gene58060 | -0.804284 | 2.33E-49 | -1.69E-46 |
| MS.gene055730 | MS.gene58060 | -0.802914 | 4.47E-49 | -1.69E-46 |
| MS.gene055731 | MS.gene58060 | -0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene58060 | 0.906696 | 1.13E-80 | -1.69E-46 |
| MS.gene055750 | MS.gene58060 | 0.874173 | 8.31E-68 | -1.69E-46 |
| MS.gene055751 | MS.gene58060 | 0.914754 | 1.32E-84 | -1.69E-46 |
| MS.gene055776 | MS.gene58060 | 0.832226 | 1.07E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene58060 | 0.894849 | 1.67E-75 | -1.69E-46 |
| MS.gene055941 | MS.gene58060 | 0.835166 | 1.97E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene58060 | -0.836847 | 7.36E-57 | -1.69E-46 |
| MS.gene056224 | MS.gene58060 | -0.819954 | 8.85E-53 | -1.69E-46 |
| MS.gene056266 | MS.gene58060 | 0.803404 | 3.54E-49 | -1.69E-46 |
| MS.gene056283 | MS.gene58060 | 0.841447 | 4.73E-58 | -1.69E-46 |
| MS.gene056354 | MS.gene58060 | -0.810797 | 9.64E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene58060 | 0.832072 | 1.16E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene58060 | 0.876763 | 1.08E-68 | -1.69E-46 |
| MS.gene056510 | MS.gene58060 | 0.840422 | 8.78E-58 | -1.69E-46 |
| MS.gene056549 | MS.gene58060 | 0.838476 | 2.81E-57 | -1.69E-46 |
| MS.gene056590 | MS.gene58060 | -0.801584 | 8.41E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene58060 | -0.801418 | 9.09E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene58060 | 0.842945 | 1.90E-58 | -1.69E-46 |
| MS.gene056678 | MS.gene58060 | -0.82241 | 2.40E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene58060 | 0.875232 | 3.62E-68 | -1.69E-46 |
| MS.gene056694 | MS.gene58060 | -0.84019 | 1.01E-57 | -1.69E-46 |
| MS.gene056697 | MS.gene58060 | -0.825156 | 5.47E-54 | -1.69E-46 |
| MS.gene056856 | MS.gene58060 | -0.891059 | 5.61E-74 | -1.69E-46 |
| MS.gene056857 | MS.gene58060 | -0.832371 | 9.82E-56 | -1.69E-46 |
| MS.gene056903 | MS.gene58060 | 0.833715 | 4.55E-56 | -1.69E-46 |
| MS.gene057076 | MS.gene58060 | 0.819775 | 9.73E-53 | -1.69E-46 |
| MS.gene057246 | MS.gene58060 | 0.815581 | 8.59E-52 | -1.69E-46 |
| MS.gene057332 | MS.gene58060 | 0.813339 | 2.69E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene58060 | 0.842424 | 2.61E-58 | -1.69E-46 |
| MS.gene057717 | MS.gene58060 | -0.81618 | 6.32E-52 | -1.69E-46 |
| MS.gene057768 | MS.gene58060 | -0.831003 | 2.14E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene58060 | 0.848769 | 4.96E-60 | -1.69E-46 |
| MS.gene057857 | MS.gene58060 | 0.819989 | 8.69E-53 | -1.69E-46 |
| MS.gene058068 | MS.gene58060 | -0.815118 | 1.09E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene58060 | -0.804626 | 1.97E-49 | -1.69E-46 |
| MS.gene058158 | MS.gene58060 | -0.811435 | 7.01E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene58060 | -0.806555 | 7.77E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene58060 | -0.812774 | 3.58E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene58060 | -0.800141 | 1.66E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene58060 | -0.874626 | 5.83E-68 | -1.69E-46 |
| MS.gene058335 | MS.gene58060 | 0.821212 | 4.55E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene58060 | 0.839933 | 1.18E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene58060 | 0.852734 | 3.80E-61 | -1.69E-46 |
| MS.gene058382 | MS.gene58060 | -0.812063 | 5.12E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene58060 | 0.868407 | 6.68E-66 | -1.69E-46 |
| MS.gene058448 | MS.gene58060 | 0.805725 | 1.16E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene58060 | 0.830158 | 3.44E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene58060 | -0.856805 | 2.51E-62 | -1.69E-46 |
| MS.gene058723 | MS.gene58060 | 0.825823 | 3.80E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene58060 | 0.855251 | 7.15E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene58060 | 0.876197 | 1.69E-68 | -1.69E-46 |
| MS.gene058978 | MS.gene58060 | -0.804767 | 1.84E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene58060 | 0.860151 | 2.52E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene58060 | 0.889866 | 1.65E-73 | -1.69E-46 |
| MS.gene059029 | MS.gene58060 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene059079 | MS.gene58060 | 0.875748 | 2.41E-68 | -1.69E-46 |
| MS.gene05912 | MS.gene58060 | 0.84402 | 9.79E-59 | -1.69E-46 |
| MS.gene05913 | MS.gene58060 | 0.836495 | 9.05E-57 | -1.69E-46 |
| MS.gene05914 | MS.gene58060 | 0.853798 | 1.88E-61 | -1.69E-46 |
| MS.gene05926 | MS.gene58060 | -0.801138 | 1.04E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene58060 | 0.822672 | 2.09E-53 | -1.69E-46 |
| MS.gene059526 | MS.gene58060 | -0.838773 | 2.36E-57 | -1.69E-46 |
| MS.gene05960 | MS.gene58060 | -0.806399 | 8.38E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene58060 | 0.813578 | 2.38E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene58060 | 0.87201 | 4.41E-67 | -1.69E-46 |
| MS.gene059699 | MS.gene58060 | -0.807239 | 5.57E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene58060 | -0.811808 | 5.82E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene58060 | 0.837262 | 5.77E-57 | -1.69E-46 |
| MS.gene059756 | MS.gene58060 | 0.818274 | 2.13E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene58060 | 0.818831 | 1.60E-52 | -1.69E-46 |
| MS.gene059855 | MS.gene58060 | -0.804905 | 1.73E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene58060 | 0.875088 | 4.06E-68 | -1.69E-46 |
| MS.gene059902 | MS.gene58060 | 0.809185 | 2.14E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene58060 | -0.801859 | 7.38E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene58060 | 0.842377 | 2.68E-58 | -1.69E-46 |
| MS.gene06027 | MS.gene58060 | 0.823133 | 1.63E-53 | -1.69E-46 |
| MS.gene060405 | MS.gene58060 | -0.826579 | 2.51E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene58060 | -0.80828 | 3.35E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene58060 | 0.845052 | 5.17E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene58060 | 0.895015 | 1.43E-75 | -1.69E-46 |
| MS.gene060778 | MS.gene58060 | 0.81505 | 1.13E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene58060 | 0.850404 | 1.74E-60 | -1.69E-46 |
| MS.gene060823 | MS.gene58060 | -0.86644 | 2.85E-65 | -1.69E-46 |
| MS.gene060838 | MS.gene58060 | -0.805481 | 1.31E-49 | -1.69E-46 |
| MS.gene06084 | MS.gene58060 | -0.813257 | 2.81E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene58060 | 0.819491 | 1.13E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene58060 | 0.893392 | 6.56E-75 | -1.69E-46 |
| MS.gene061044 | MS.gene58060 | -0.877451 | 6.22E-69 | -1.69E-46 |
| MS.gene061150 | MS.gene58060 | 0.853438 | 2.39E-61 | -1.69E-46 |
| MS.gene061231 | MS.gene58060 | 0.838043 | 3.64E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58060.t1 | MTR_4g115730 | 98.288 | 292 | 5 | 0 | 1 | 292 | 1 | 292 | 0.0 | 589 |
| MS.gene58060.t1 | MTR_4g115730 | 100.000 | 252 | 0 | 0 | 41 | 292 | 1 | 252 | 0.0 | 514 |
| MS.gene58060.t1 | MTR_4g068970 | 35.185 | 270 | 140 | 9 | 42 | 289 | 70 | 326 | 2.56e-32 | 125 |
| MS.gene58060.t1 | MTR_4g021815 | 27.715 | 267 | 147 | 11 | 56 | 292 | 4 | 254 | 3.88e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58060.t1 | AT2G34460 | 72.963 | 270 | 65 | 3 | 22 | 289 | 14 | 277 | 2.66e-141 | 399 |
| MS.gene58060.t1 | AT3G18890 | 33.453 | 278 | 149 | 11 | 41 | 292 | 62 | 329 | 4.52e-30 | 119 |
| MS.gene58060.t1 | AT2G37660 | 30.952 | 168 | 99 | 7 | 135 | 292 | 164 | 324 | 1.19e-12 | 67.8 |
| MS.gene58060.t1 | AT4G31530 | 31.746 | 315 | 158 | 17 | 8 | 286 | 25 | 318 | 8.19e-11 | 62.4 |
Find 79 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGCAGGTTGACAATTT+TGG | 0.186826 | 8.3:+10612090 | MS.gene58060:intron |
| AGCGGCTCCATTGACTAAAA+TGG | 0.269340 | 8.3:-10612175 | None:intergenic |
| CACCTTAGTGGCAAAATTAC+AGG | 0.310873 | 8.3:+10612248 | MS.gene58060:CDS |
| TGCAACTTGATCTCTGGATA+TGG | 0.317263 | 8.3:-10612497 | None:intergenic |
| CCACAGGCTTTCGGCCAGGC+TGG | 0.324155 | 8.3:+10611291 | MS.gene58060:CDS |
| GTTGAGGAAGGGAAGAGATT+TGG | 0.346298 | 8.3:-10610511 | None:intergenic |
| CGCGCATACCATGATCTCTT+TGG | 0.346559 | 8.3:+10612601 | MS.gene58060:CDS |
| TAGTTTGTGCCACAGGCTTT+CGG | 0.360254 | 8.3:+10611282 | MS.gene58060:CDS |
| CAGATATTATCGCTGAACTA+TGG | 0.361240 | 8.3:-10612626 | None:intergenic |
| GAAAATCATATCAGGAAATC+TGG | 0.374335 | 8.3:+10612273 | MS.gene58060:CDS |
| GATAAGCTAGCTGAAGCAAT+TGG | 0.379075 | 8.3:+10611242 | MS.gene58060:CDS |
| TGGATATGGAACCTTCATAA+AGG | 0.390225 | 8.3:-10612483 | None:intergenic |
| TACAGGCAGAAAATCATATC+AGG | 0.402158 | 8.3:+10612265 | MS.gene58060:CDS |
| TCCTACTGGAAATGTTGTTA+TGG | 0.413074 | 8.3:+10612341 | MS.gene58060:CDS |
| CACAGGCTTTCGGCCAGGCT+GGG | 0.417213 | 8.3:+10611292 | MS.gene58060:CDS |
| AGGAAGAGGGAGCGGTGAAT+TGG | 0.419663 | 8.3:-10610482 | None:intergenic |
| ATAAGCTAGCTGAAGCAATT+GGG | 0.423531 | 8.3:+10611243 | MS.gene58060:CDS |
| AGATTTGGTTCTGAAGGAAG+AGG | 0.436139 | 8.3:-10610496 | None:intergenic |
| GTAGGGTTTCTTGCAATAAG+AGG | 0.436214 | 8.3:-10610432 | None:intergenic |
| TGTGCCACAGGCTTTCGGCC+AGG | 0.448901 | 8.3:+10611287 | MS.gene58060:CDS |
| TTAGTCAATGGAGCCGCTAT+GGG | 0.459534 | 8.3:+10612180 | MS.gene58060:CDS |
| TTTAGTCAATGGAGCCGCTA+TGG | 0.462769 | 8.3:+10612179 | MS.gene58060:CDS |
| AAACTTACAAATTGAAGAGA+TGG | 0.465083 | 8.3:-10610801 | None:intergenic |
| TACTTCTGCAACTTGATCTC+TGG | 0.466748 | 8.3:-10612503 | None:intergenic |
| GCTGGAGCTACTGGTAGTAC+TGG | 0.469225 | 8.3:+10610684 | MS.gene58060:CDS |
| GATGGGAAAGTGTGGAATGT+AGG | 0.469287 | 8.3:-10610450 | None:intergenic |
| GGGAAGAGATTTGGTTCTGA+AGG | 0.477299 | 8.3:-10610502 | None:intergenic |
| GGATTTGCTTGCCCCATGGA+AGG | 0.484251 | 8.3:+10611313 | MS.gene58060:CDS |
| AGATCATGGTATGCGCGCTT+AGG | 0.484675 | 8.3:-10612595 | None:intergenic |
| ATGGGAAAGTGTGGAATGTA+GGG | 0.487437 | 8.3:-10610449 | None:intergenic |
| GGATATGGAACCTTCATAAA+GGG | 0.488764 | 8.3:-10612482 | None:intergenic |
| TAAAGCTGGGGTTAGAGACT+TGG | 0.490510 | 8.3:+10610749 | MS.gene58060:CDS |
| CTATGGAACCAAAGAGATCA+TGG | 0.496271 | 8.3:-10612609 | None:intergenic |
| GAAGCAGTAGTTTGTGCCAC+AGG | 0.496380 | 8.3:+10611275 | MS.gene58060:CDS |
| TACAAATTGAAGAGATGGGT+TGG | 0.504301 | 8.3:-10610796 | None:intergenic |
| GCTGGGATTTGCTTGCCCCA+TGG | 0.510222 | 8.3:+10611309 | MS.gene58060:CDS |
| GTGGAACAGTTACTTGCAAA+GGG | 0.511281 | 8.3:+10610717 | MS.gene58060:CDS |
| TGTCAGGACACCCTTTATGA+AGG | 0.512820 | 8.3:+10612472 | MS.gene58060:intron |
| AAAATTAACAAACCTTCCAT+GGG | 0.515977 | 8.3:-10611325 | None:intergenic |
| CGTGGAACAGTTACTTGCAA+AGG | 0.522560 | 8.3:+10610716 | MS.gene58060:CDS |
| CTTTCCTGCATGCTTCAACA+AGG | 0.527070 | 8.3:-10612122 | None:intergenic |
| ACAACTTTGTAAGATGCCTC+AGG | 0.530129 | 8.3:-10612547 | None:intergenic |
| TATGCGCGCTTAGGAGCATC+AGG | 0.530362 | 8.3:-10612586 | None:intergenic |
| TAAACCTTGTTGAAGCATGC+AGG | 0.536699 | 8.3:+10612118 | MS.gene58060:CDS |
| GTGAATTGGCGAGTGTGGGA+TGG | 0.545645 | 8.3:-10610468 | None:intergenic |
| GAGCGGTGAATTGGCGAGTG+TGG | 0.546264 | 8.3:-10610473 | None:intergenic |
| TGAATTGGCGAGTGTGGGAT+GGG | 0.547232 | 8.3:-10610467 | None:intergenic |
| AACTTACAAATTGAAGAGAT+GGG | 0.550774 | 8.3:-10610800 | None:intergenic |
| GGGGCAAGCAAATCCCAGCC+TGG | 0.552735 | 8.3:-10611305 | None:intergenic |
| TACCTTTGCGAAGTTGAGGA+AGG | 0.555784 | 8.3:-10610523 | None:intergenic |
| AGCGGTGAATTGGCGAGTGT+GGG | 0.558367 | 8.3:-10610472 | None:intergenic |
| GTGTTACCTTTGCGAAGTTG+AGG | 0.563021 | 8.3:-10610527 | None:intergenic |
| CTGGAGCTACTGGTAGTACT+GGG | 0.565656 | 8.3:+10610685 | MS.gene58060:CDS |
| TGAGGCATCTTACAAAGTTG+TGG | 0.567286 | 8.3:+10612549 | MS.gene58060:CDS |
| TATGGGGCAGCTACTCAATC+CGG | 0.569169 | 8.3:+10612197 | MS.gene58060:CDS |
| AGAAGTAGCTGTGGAATCGT+TGG | 0.570182 | 8.3:+10612519 | MS.gene58060:CDS |
| GGTTCTGAAGGAAGAGGGAG+CGG | 0.573272 | 8.3:-10610490 | None:intergenic |
| GATTTGGTTCTGAAGGAAGA+GGG | 0.577302 | 8.3:-10610495 | None:intergenic |
| ACCTTTGCGAAGTTGAGGAA+GGG | 0.578834 | 8.3:-10610522 | None:intergenic |
| CCAGCCTGGCCGAAAGCCTG+TGG | 0.586862 | 8.3:-10611291 | None:intergenic |
| ATAACAACATTTCCAGTAGG+AGG | 0.590217 | 8.3:-10612339 | None:intergenic |
| ACGTTGAGAAAGATGTAAGC+CGG | 0.592173 | 8.3:-10612216 | None:intergenic |
| TCCCTTCCTCAACTTCGCAA+AGG | 0.592473 | 8.3:+10610521 | MS.gene58060:CDS |
| TAAGCTAGCTGAAGCAATTG+GGG | 0.593302 | 8.3:+10611244 | MS.gene58060:CDS |
| TGAAATCACTCAGCAAGCAG+TGG | 0.616011 | 8.3:+10610626 | MS.gene58060:CDS |
| GAGTGTGGGATGGGAAAGTG+TGG | 0.617968 | 8.3:-10610458 | None:intergenic |
| GTTAAAGTTGATGTCACAGA+GGG | 0.630073 | 8.3:+10611215 | MS.gene58060:CDS |
| TCAAGTTGCAGAAGTAGCTG+TGG | 0.632803 | 8.3:+10612510 | MS.gene58060:CDS |
| ATTGAGTAGCTGCCCCATAG+CGG | 0.638328 | 8.3:-10612193 | None:intergenic |
| AATTACACAATCATAAGACC+TGG | 0.643894 | 8.3:+10612300 | MS.gene58060:CDS |
| TAGTCAATGGAGCCGCTATG+GGG | 0.647798 | 8.3:+10612181 | MS.gene58060:CDS |
| TACACAATCATAAGACCTGG+AGG | 0.652611 | 8.3:+10612303 | MS.gene58060:CDS |
| TCCATAACAACATTTCCAGT+AGG | 0.656385 | 8.3:-10612342 | None:intergenic |
| GGAATCGTTGGCTTATCCTG+AGG | 0.676950 | 8.3:+10612531 | MS.gene58060:CDS |
| TAGTACTGGGAAAAGAATCG+TGG | 0.683015 | 8.3:+10610698 | MS.gene58060:CDS |
| ACACAATCATAAGACCTGGA+GGG | 0.693729 | 8.3:+10612304 | MS.gene58060:CDS |
| AAATGTTGTTATGGAGCCAG+AGG | 0.716025 | 8.3:+10612350 | MS.gene58060:CDS |
| AAATTAACAAACCTTCCATG+GGG | 0.740909 | 8.3:-10611324 | None:intergenic |
| GGTTAAAGTTGATGTCACAG+AGG | 0.749642 | 8.3:+10611214 | MS.gene58060:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATTTTTATGTTAGTA+TGG | + | chr8.3:10611402-10611421 | MS.gene58060:intron | 10.0% |
| !! | TATAACAAAATATTGTATAC+TGG | - | chr8.3:10612058-10612077 | None:intergenic | 15.0% |
| !!! | ACAATATTTTGTTATAACAA+AGG | + | chr8.3:10612062-10612081 | MS.gene58060:intron | 15.0% |
| !!! | CAATATTTTGTTATAACAAA+GGG | + | chr8.3:10612063-10612082 | MS.gene58060:intron | 15.0% |
| !!! | TTTTTTTTCTTTTTGTTAGA+TGG | + | chr8.3:10610596-10610615 | MS.gene58060:intron | 15.0% |
| !! | TTTAAATCTAAACCAAGTTA+AGG | - | chr8.3:10611466-10611485 | None:intergenic | 20.0% |
| !!! | AATTTAATTTTCTATGTGTC+AGG | + | chr8.3:10612456-10612475 | MS.gene58060:intron | 20.0% |
| !!! | ATAGTCCAATTTAAGATTAT+TGG | + | chr8.3:10610851-10610870 | MS.gene58060:intron | 20.0% |
| !!! | CTCAATTTTTTATATGTTTG+TGG | + | chr8.3:10612419-10612438 | MS.gene58060:intron | 20.0% |
| !!! | TAGTCCAATTTAAGATTATT+GGG | + | chr8.3:10610852-10610871 | MS.gene58060:intron | 20.0% |
| !!! | TATAATCTGATGCTATTTAA+AGG | - | chr8.3:10611949-10611968 | None:intergenic | 20.0% |
| ! | AAAAAATGCTAGTATTAACG+CGG | - | chr8.3:10610581-10610600 | None:intergenic | 25.0% |
| ! | AAAAATTAACAAACCTTCCA+TGG | - | chr8.3:10611329-10611348 | None:intergenic | 25.0% |
| ! | AAAATTAACAAACCTTCCAT+GGG | - | chr8.3:10611328-10611347 | None:intergenic | 25.0% |
| ! | AAACTTACAAATTGAAGAGA+TGG | - | chr8.3:10610804-10610823 | None:intergenic | 25.0% |
| ! | AACTTACAAATTGAAGAGAT+GGG | - | chr8.3:10610803-10610822 | None:intergenic | 25.0% |
| ! | ACTGTAACACTAATATAATC+AGG | + | chr8.3:10611675-10611694 | MS.gene58060:intron | 25.0% |
| ! | ATGAATCAAAACACAATTGT+TGG | + | chr8.3:10612003-10612022 | MS.gene58060:intron | 25.0% |
| ! | ATGGTAGTAGAATATTAGAA+TGG | + | chr8.3:10611359-10611378 | MS.gene58060:intron | 25.0% |
| ! | CAAATAAACCAATTCAAACA+GGG | + | chr8.3:10611128-10611147 | MS.gene58060:intron | 25.0% |
| ! | TCAAATAAACCAATTCAAAC+AGG | + | chr8.3:10611127-10611146 | MS.gene58060:intron | 25.0% |
| ! | TTAGATTCTTCACTAGTAAA+GGG | + | chr8.3:10611880-10611899 | MS.gene58060:intron | 25.0% |
| ! | TTTAGATTCTTCACTAGTAA+AGG | + | chr8.3:10611879-10611898 | MS.gene58060:intron | 25.0% |
| !! | GGACTATTTTGCAATATAAT+GGG | - | chr8.3:10610838-10610857 | None:intergenic | 25.0% |
| !! | TGGACTATTTTGCAATATAA+TGG | - | chr8.3:10610839-10610858 | None:intergenic | 25.0% |
| !! | TTTTCTTTTTGTTAGATGGA+AGG | + | chr8.3:10610600-10610619 | MS.gene58060:intron | 25.0% |
| !!! | AAAATGATCTCTAGAACTTA+CGG | + | chr8.3:10611491-10611510 | MS.gene58060:intron | 25.0% |
| !!! | ACAATTGTGTTTTGATTCAT+TGG | - | chr8.3:10612003-10612022 | None:intergenic | 25.0% |
| !!! | ATAAGTTCCATTTTAGTCAA+TGG | + | chr8.3:10612168-10612187 | MS.gene58060:CDS | 25.0% |
| AAATTAACAAACCTTCCATG+GGG | - | chr8.3:10611327-10611346 | None:intergenic | 30.0% | |
| AACAAAGGGATATATTATGC+AGG | + | chr8.3:10612077-10612096 | MS.gene58060:intron | 30.0% | |
| AATTACACAATCATAAGACC+TGG | + | chr8.3:10612300-10612319 | MS.gene58060:CDS | 30.0% | |
| ACTAGTGAAGAATCTAAACT+TGG | - | chr8.3:10611877-10611896 | None:intergenic | 30.0% | |
| ACTCTATCTAATATCCAGAA+TGG | - | chr8.3:10611765-10611784 | None:intergenic | 30.0% | |
| AGTAGGCTACATTATATACA+TGG | + | chr8.3:10611599-10611618 | MS.gene58060:intron | 30.0% | |
| ATCAAAACACAATTGTTGGT+TGG | + | chr8.3:10612007-10612026 | MS.gene58060:intron | 30.0% | |
| CAGACCCAATAATCTTAAAT+TGG | - | chr8.3:10610859-10610878 | None:intergenic | 30.0% | |
| GAAAATCATATCAGGAAATC+TGG | + | chr8.3:10612273-10612292 | MS.gene58060:CDS | 30.0% | |
| GAATGACATGATGTGTAATT+TGG | + | chr8.3:10611167-10611186 | MS.gene58060:intron | 30.0% | |
| GTACAAGTTCTGTAAAAGTT+TGG | + | chr8.3:10611560-10611579 | MS.gene58060:intron | 30.0% | |
| TAGAACTTACGGTGATTATT+GGG | + | chr8.3:10611502-10611521 | MS.gene58060:intron | 30.0% | |
| TATAAACAATTTGCCCTGTT+TGG | + | chr8.3:10610879-10610898 | MS.gene58060:intron | 30.0% | |
| ! | AAGAAGAAAGTTTTTGTTGC+TGG | + | chr8.3:10610666-10610685 | MS.gene58060:CDS | 30.0% |
| ! | ATTAAGTTGTTGATCCAAAC+AGG | - | chr8.3:10610896-10610915 | None:intergenic | 30.0% |
| ! | TACATCTTTCTCAACGTTTT+CGG | + | chr8.3:10612222-10612241 | MS.gene58060:CDS | 30.0% |
| ! | TCAAAACACAATTGTTGGTT+GGG | + | chr8.3:10612008-10612027 | MS.gene58060:intron | 30.0% |
| ! | TTAAGTTGTTGATCCAAACA+GGG | - | chr8.3:10610895-10610914 | None:intergenic | 30.0% |
| !! | ATTATGCAGGTTGACAATTT+TGG | + | chr8.3:10612090-10612109 | MS.gene58060:intron | 30.0% |
| !!! | GTGTTTGATACTTTTGAAGT+AGG | + | chr8.3:10611582-10611601 | MS.gene58060:intron | 30.0% |
| AAGCTATCATGTAGAGCTTA+TGG | + | chr8.3:10611025-10611044 | MS.gene58060:intron | 35.0% | |
| ATAACAACATTTCCAGTAGG+AGG | - | chr8.3:10612342-10612361 | None:intergenic | 35.0% | |
| ATAAGCTAGCTGAAGCAATT+GGG | + | chr8.3:10611243-10611262 | MS.gene58060:CDS | 35.0% | |
| ATATGTGTGAGTTCATATGC+AGG | + | chr8.3:10611193-10611212 | MS.gene58060:intron | 35.0% | |
| CTAGAACTTACGGTGATTAT+TGG | + | chr8.3:10611501-10611520 | MS.gene58060:intron | 35.0% | |
| CTGGATATTAGATAGAGTTG+AGG | + | chr8.3:10611767-10611786 | MS.gene58060:intron | 35.0% | |
| GAAATTTAAGCAAACACCTC+TGG | - | chr8.3:10612369-10612388 | None:intergenic | 35.0% | |
| GGATATGGAACCTTCATAAA+GGG | - | chr8.3:10612485-10612504 | None:intergenic | 35.0% | |
| GGTTACTAAAACAAGAACCA+CGG | - | chr8.3:10611738-10611757 | None:intergenic | 35.0% | |
| TACAAATTGAAGAGATGGGT+TGG | - | chr8.3:10610799-10610818 | None:intergenic | 35.0% | |
| TACAGGCAGAAAATCATATC+AGG | + | chr8.3:10612265-10612284 | MS.gene58060:CDS | 35.0% | |
| TCCATAACAACATTTCCAGT+AGG | - | chr8.3:10612345-10612364 | None:intergenic | 35.0% | |
| TCCTACTGGAAATGTTGTTA+TGG | + | chr8.3:10612341-10612360 | MS.gene58060:CDS | 35.0% | |
| TGGATATGGAACCTTCATAA+AGG | - | chr8.3:10612486-10612505 | None:intergenic | 35.0% | |
| ! | TGGGTGCAACATATTTTCAT+TGG | + | chr8.3:10611521-10611540 | MS.gene58060:intron | 35.0% |
| !! | GTTAAAGTTGATGTCACAGA+GGG | + | chr8.3:10611215-10611234 | MS.gene58060:CDS | 35.0% |
| AAATGTTGTTATGGAGCCAG+AGG | + | chr8.3:10612350-10612369 | MS.gene58060:CDS | 40.0% | |
| ACAACTTTGTAAGATGCCTC+AGG | - | chr8.3:10612550-10612569 | None:intergenic | 40.0% | |
| ACACAATCATAAGACCTGGA+GGG | + | chr8.3:10612304-10612323 | MS.gene58060:CDS | 40.0% | |
| ACAGTTTAACACGCAGAAAC+CGG | - | chr8.3:10611660-10611679 | None:intergenic | 40.0% | |
| ACGTTGAGAAAGATGTAAGC+CGG | - | chr8.3:10612219-10612238 | None:intergenic | 40.0% | |
| CACCTTAGTGGCAAAATTAC+AGG | + | chr8.3:10612248-10612267 | MS.gene58060:CDS | 40.0% | |
| CTATGGAACCAAAGAGATCA+TGG | - | chr8.3:10612612-10612631 | None:intergenic | 40.0% | |
| GATAAGCTAGCTGAAGCAAT+TGG | + | chr8.3:10611242-10611261 | MS.gene58060:CDS | 40.0% | |
| GTAGGGTTTCTTGCAATAAG+AGG | - | chr8.3:10610435-10610454 | None:intergenic | 40.0% | |
| GTGGAACAGTTACTTGCAAA+GGG | + | chr8.3:10610717-10610736 | MS.gene58060:CDS | 40.0% | |
| TAAACCTTGTTGAAGCATGC+AGG | + | chr8.3:10612118-10612137 | MS.gene58060:CDS | 40.0% | |
| TAAGCTAGCTGAAGCAATTG+GGG | + | chr8.3:10611244-10611263 | MS.gene58060:CDS | 40.0% | |
| TACACAATCATAAGACCTGG+AGG | + | chr8.3:10612303-10612322 | MS.gene58060:CDS | 40.0% | |
| TACTTCTGCAACTTGATCTC+TGG | - | chr8.3:10612506-10612525 | None:intergenic | 40.0% | |
| TCTAATATCCAGAATGGCGT+TGG | - | chr8.3:10611759-10611778 | None:intergenic | 40.0% | |
| TGCAACTTGATCTCTGGATA+TGG | - | chr8.3:10612500-10612519 | None:intergenic | 40.0% | |
| TTGAAAAACGATCCTCCTAC+TGG | + | chr8.3:10612327-10612346 | MS.gene58060:CDS | 40.0% | |
| TTTAGTAACCAACGCCATTC+TGG | + | chr8.3:10611748-10611767 | MS.gene58060:intron | 40.0% | |
| ! | ATGGGAAAGTGTGGAATGTA+GGG | - | chr8.3:10610452-10610471 | None:intergenic | 40.0% |
| ! | GTTAATGAGTGGCCTTAACT+TGG | + | chr8.3:10611451-10611470 | MS.gene58060:intron | 40.0% |
| ! | TAGTACTGGGAAAAGAATCG+TGG | + | chr8.3:10610698-10610717 | MS.gene58060:CDS | 40.0% |
| ! | TGAGGCATCTTACAAAGTTG+TGG | + | chr8.3:10612549-10612568 | MS.gene58060:CDS | 40.0% |
| ! | TGCCTGTAATTTTGCCACTA+AGG | - | chr8.3:10612253-10612272 | None:intergenic | 40.0% |
| ! | TTGATTCCACATTTTCCCTC+CGG | + | chr8.3:10611638-10611657 | MS.gene58060:intron | 40.0% |
| !! | AGATTTGGTTCTGAAGGAAG+AGG | - | chr8.3:10610499-10610518 | None:intergenic | 40.0% |
| !! | CAAGTACTTCTGAGACTCTA+TGG | - | chr8.3:10611092-10611111 | None:intergenic | 40.0% |
| !! | GATTTGGTTCTGAAGGAAGA+GGG | - | chr8.3:10610498-10610517 | None:intergenic | 40.0% |
| !! | GGTTAAAGTTGATGTCACAG+AGG | + | chr8.3:10611214-10611233 | MS.gene58060:intron | 40.0% |
| !!! | AAGGGTTTTGCTGTTAAAGC+TGG | + | chr8.3:10610735-10610754 | MS.gene58060:CDS | 40.0% |
| !!! | AGGGTTTTGCTGTTAAAGCT+GGG | + | chr8.3:10610736-10610755 | MS.gene58060:CDS | 40.0% |
| ACACACAGCCCTGTTTGAAT+TGG | - | chr8.3:10611139-10611158 | None:intergenic | 45.0% | |
| ACCTTTGCGAAGTTGAGGAA+GGG | - | chr8.3:10610525-10610544 | None:intergenic | 45.0% | |
| AGAAGTAGCTGTGGAATCGT+TGG | + | chr8.3:10612519-10612538 | MS.gene58060:CDS | 45.0% | |
| CGTGGAACAGTTACTTGCAA+AGG | + | chr8.3:10610716-10610735 | MS.gene58060:CDS | 45.0% | |
| CTTTCCTGCATGCTTCAACA+AGG | - | chr8.3:10612125-10612144 | None:intergenic | 45.0% | |
| GATAGCTTTCATTCATGCCG+TGG | + | chr8.3:10611718-10611737 | MS.gene58060:intron | 45.0% | |
| GTGTTACCTTTGCGAAGTTG+AGG | - | chr8.3:10610530-10610549 | None:intergenic | 45.0% | |
| GTTGAGGAAGGGAAGAGATT+TGG | - | chr8.3:10610514-10610533 | None:intergenic | 45.0% | |
| TAAAGCTGGGGTTAGAGACT+TGG | + | chr8.3:10610749-10610768 | MS.gene58060:CDS | 45.0% | |
| TAAGGCCACTCATTAACCAG+TGG | - | chr8.3:10611448-10611467 | None:intergenic | 45.0% | |
| TACCTTTGCGAAGTTGAGGA+AGG | - | chr8.3:10610526-10610545 | None:intergenic | 45.0% | |
| TGAAATCACTCAGCAAGCAG+TGG | + | chr8.3:10610626-10610645 | MS.gene58060:CDS | 45.0% | |
| TGTCAGGACACCCTTTATGA+AGG | + | chr8.3:10612472-10612491 | MS.gene58060:intron | 45.0% | |
| TTAGTCAATGGAGCCGCTAT+GGG | + | chr8.3:10612180-10612199 | MS.gene58060:CDS | 45.0% | |
| TTTAACACGCAGAAACCGGA+GGG | - | chr8.3:10611656-10611675 | None:intergenic | 45.0% | |
| TTTAGTCAATGGAGCCGCTA+TGG | + | chr8.3:10612179-10612198 | MS.gene58060:CDS | 45.0% | |
| ! | AGCGGCTCCATTGACTAAAA+TGG | - | chr8.3:10612178-10612197 | None:intergenic | 45.0% |
| ! | ATTGTTGGTTGGGACTTCAG+TGG | + | chr8.3:10612018-10612037 | MS.gene58060:intron | 45.0% |
| ! | GATGGGAAAGTGTGGAATGT+AGG | - | chr8.3:10610453-10610472 | None:intergenic | 45.0% |
| ! | GTTTTTGTTGCTGGAGCTAC+TGG | + | chr8.3:10610675-10610694 | MS.gene58060:CDS | 45.0% |
| ! | TAGTTTGTGCCACAGGCTTT+CGG | + | chr8.3:10611282-10611301 | MS.gene58060:CDS | 45.0% |
| ! | TCAAGTTGCAGAAGTAGCTG+TGG | + | chr8.3:10612510-10612529 | MS.gene58060:CDS | 45.0% |
| !! | CTTCAGTGGATTATTCTCGC+TGG | + | chr8.3:10612032-10612051 | MS.gene58060:intron | 45.0% |
| !! | GGGAAGAGATTTGGTTCTGA+AGG | - | chr8.3:10610505-10610524 | None:intergenic | 45.0% |
| !! | GTTTTGATATCAGCTGCCAC+TGG | + | chr8.3:10611429-10611448 | MS.gene58060:intron | 45.0% |
| !!! | GGGTTTTGCTGTTAAAGCTG+GGG | + | chr8.3:10610737-10610756 | MS.gene58060:CDS | 45.0% |
| !!! | TTAATTTTTTGTTTATATTA+TGG | + | chr8.3:10611340-10611359 | MS.gene58060:intron | 5.0% |
| AGATCATGGTATGCGCGCTT+AGG | - | chr8.3:10612598-10612617 | None:intergenic | 50.0% | |
| ATTGAGTAGCTGCCCCATAG+CGG | - | chr8.3:10612196-10612215 | None:intergenic | 50.0% | |
| CAGAAACCGGAGGGAAAATG+TGG | - | chr8.3:10611647-10611666 | None:intergenic | 50.0% | |
| CGCGCATACCATGATCTCTT+TGG | + | chr8.3:10612601-10612620 | MS.gene58060:CDS | 50.0% | |
| CTGGAGCTACTGGTAGTACT+GGG | + | chr8.3:10610685-10610704 | MS.gene58060:CDS | 50.0% | |
| GTTTAACACGCAGAAACCGG+AGG | - | chr8.3:10611657-10611676 | None:intergenic | 50.0% | |
| TAGTCAATGGAGCCGCTATG+GGG | + | chr8.3:10612181-10612200 | MS.gene58060:CDS | 50.0% | |
| TATGGGGCAGCTACTCAATC+CGG | + | chr8.3:10612197-10612216 | MS.gene58060:CDS | 50.0% | |
| TCCCTTCCTCAACTTCGCAA+AGG | + | chr8.3:10610521-10610540 | MS.gene58060:CDS | 50.0% | |
| TGAATTGGCGAGTGTGGGAT+GGG | - | chr8.3:10610470-10610489 | None:intergenic | 50.0% | |
| ! | AGCTGCCACTGGTTAATGAG+TGG | + | chr8.3:10611440-10611459 | MS.gene58060:intron | 50.0% |
| ! | CGTTTTCGGACTCACCTTAG+TGG | + | chr8.3:10612236-10612255 | MS.gene58060:CDS | 50.0% |
| ! | GAAGCAGTAGTTTGTGCCAC+AGG | + | chr8.3:10611275-10611294 | MS.gene58060:CDS | 50.0% |
| !! | GGAATCGTTGGCTTATCCTG+AGG | + | chr8.3:10612531-10612550 | MS.gene58060:CDS | 50.0% |
| !! | GGATCGTTTTTCAACCCTCC+AGG | - | chr8.3:10612321-10612340 | None:intergenic | 50.0% |
| AGCGGTGAATTGGCGAGTGT+GGG | - | chr8.3:10610475-10610494 | None:intergenic | 55.0% | |
| AGGAAGAGGGAGCGGTGAAT+TGG | - | chr8.3:10610485-10610504 | None:intergenic | 55.0% | |
| GAGTGTGGGATGGGAAAGTG+TGG | - | chr8.3:10610461-10610480 | None:intergenic | 55.0% | |
| GCTGGAGCTACTGGTAGTAC+TGG | + | chr8.3:10610684-10610703 | MS.gene58060:CDS | 55.0% | |
| GTGAATTGGCGAGTGTGGGA+TGG | - | chr8.3:10610471-10610490 | None:intergenic | 55.0% | |
| ! | GGATTTGCTTGCCCCATGGA+AGG | + | chr8.3:10611313-10611332 | MS.gene58060:CDS | 55.0% |
| !! | GGTTCTGAAGGAAGAGGGAG+CGG | - | chr8.3:10610493-10610512 | None:intergenic | 55.0% |
| !! | TATGCGCGCTTAGGAGCATC+AGG | - | chr8.3:10612589-10612608 | None:intergenic | 55.0% |
| GAGCGGTGAATTGGCGAGTG+TGG | - | chr8.3:10610476-10610495 | None:intergenic | 60.0% | |
| ! | GCTGGGATTTGCTTGCCCCA+TGG | + | chr8.3:10611309-10611328 | MS.gene58060:CDS | 60.0% |
| CACAGGCTTTCGGCCAGGCT+GGG | + | chr8.3:10611292-10611311 | MS.gene58060:CDS | 65.0% | |
| GGGGCAAGCAAATCCCAGCC+TGG | - | chr8.3:10611308-10611327 | None:intergenic | 65.0% | |
| TGTGCCACAGGCTTTCGGCC+AGG | + | chr8.3:10611287-10611306 | MS.gene58060:CDS | 65.0% | |
| CCACAGGCTTTCGGCCAGGC+TGG | + | chr8.3:10611291-10611310 | MS.gene58060:CDS | 70.0% | |
| CCAGCCTGGCCGAAAGCCTG+TGG | - | chr8.3:10611294-10611313 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 10610423 | 10612642 | 10610423 | ID=MS.gene58060 |
| chr8.3 | mRNA | 10610423 | 10612642 | 10610423 | ID=MS.gene58060.t1;Parent=MS.gene58060 |
| chr8.3 | exon | 10610423 | 10610542 | 10610423 | ID=MS.gene58060.t1.exon1;Parent=MS.gene58060.t1 |
| chr8.3 | CDS | 10610423 | 10610542 | 10610423 | ID=cds.MS.gene58060.t1;Parent=MS.gene58060.t1 |
| chr8.3 | exon | 10610615 | 10610815 | 10610615 | ID=MS.gene58060.t1.exon2;Parent=MS.gene58060.t1 |
| chr8.3 | CDS | 10610615 | 10610815 | 10610615 | ID=cds.MS.gene58060.t1;Parent=MS.gene58060.t1 |
| chr8.3 | exon | 10611215 | 10611334 | 10611215 | ID=MS.gene58060.t1.exon3;Parent=MS.gene58060.t1 |
| chr8.3 | CDS | 10611215 | 10611334 | 10611215 | ID=cds.MS.gene58060.t1;Parent=MS.gene58060.t1 |
| chr8.3 | exon | 10612099 | 10612371 | 10612099 | ID=MS.gene58060.t1.exon4;Parent=MS.gene58060.t1 |
| chr8.3 | CDS | 10612099 | 10612371 | 10612099 | ID=cds.MS.gene58060.t1;Parent=MS.gene58060.t1 |
| chr8.3 | exon | 10612478 | 10612642 | 10612478 | ID=MS.gene58060.t1.exon5;Parent=MS.gene58060.t1 |
| chr8.3 | CDS | 10612478 | 10612642 | 10612478 | ID=cds.MS.gene58060.t1;Parent=MS.gene58060.t1 |
| Gene Sequence |
| Protein sequence |
