Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95302.t1 | XP_013444681.1 | 97.1 | 965 | 24 | 3 | 1 | 962 | 1 | 964 | 0.00E+00 | 1885.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95302.t1 | Q9SYX2 | 48.6 | 872 | 389 | 12 | 112 | 962 | 196 | 1029 | 4.5e-212 | 739.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95302.t1 | A0A072TNB4 | 97.1 | 965 | 24 | 3 | 1 | 962 | 1 | 964 | 0.0e+00 | 1885.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene95302 | 0.827058 | 1.93E-54 | -1.69E-46 |
| MS.gene049257 | MS.gene95302 | 0.831021 | 2.11E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene95302 | 0.815227 | 1.03E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene95302 | 0.85841 | 8.40E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene95302 | 0.800737 | 1.25E-48 | -1.69E-46 |
| MS.gene050496 | MS.gene95302 | 0.813081 | 3.07E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene95302 | 0.80631 | 8.75E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene95302 | 0.800497 | 1.40E-48 | -1.69E-46 |
| MS.gene05081 | MS.gene95302 | 0.87182 | 5.11E-67 | -1.69E-46 |
| MS.gene050868 | MS.gene95302 | 0.802103 | 6.58E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene95302 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene051244 | MS.gene95302 | 0.802587 | 5.23E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene95302 | 0.811531 | 6.68E-51 | -1.69E-46 |
| MS.gene051439 | MS.gene95302 | -0.813537 | 2.44E-51 | -1.69E-46 |
| MS.gene051552 | MS.gene95302 | -0.831317 | 1.79E-55 | -1.69E-46 |
| MS.gene051651 | MS.gene95302 | -0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene051838 | MS.gene95302 | 0.848727 | 5.10E-60 | -1.69E-46 |
| MS.gene051973 | MS.gene95302 | -0.823001 | 1.75E-53 | -1.69E-46 |
| MS.gene052469 | MS.gene95302 | 0.831152 | 1.96E-55 | -1.69E-46 |
| MS.gene052494 | MS.gene95302 | -0.809106 | 2.23E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene95302 | 0.820716 | 5.92E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene95302 | 0.822754 | 2.00E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene95302 | 0.824536 | 7.65E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene95302 | 0.812699 | 3.72E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene95302 | 0.827507 | 1.51E-54 | -1.69E-46 |
| MS.gene053097 | MS.gene95302 | -0.823464 | 1.37E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene95302 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene053479 | MS.gene95302 | 0.840136 | 1.04E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene95302 | 0.839385 | 1.64E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene95302 | 0.840537 | 8.19E-58 | -1.69E-46 |
| MS.gene054107 | MS.gene95302 | 0.830144 | 3.47E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene95302 | 0.903828 | 2.32E-79 | -1.69E-46 |
| MS.gene054344 | MS.gene95302 | 0.907036 | 7.82E-81 | -1.69E-46 |
| MS.gene05470 | MS.gene95302 | 0.851362 | 9.33E-61 | -1.69E-46 |
| MS.gene054884 | MS.gene95302 | -0.877162 | 7.84E-69 | -1.69E-46 |
| MS.gene055370 | MS.gene95302 | 0.815228 | 1.03E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene95302 | 0.802339 | 5.88E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene95302 | 0.815534 | 8.80E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene95302 | 0.829145 | 6.06E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene95302 | 0.821329 | 4.28E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene95302 | 0.873616 | 1.28E-67 | -1.69E-46 |
| MS.gene056266 | MS.gene95302 | 0.816373 | 5.72E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene95302 | 0.829845 | 4.10E-55 | -1.69E-46 |
| MS.gene056387 | MS.gene95302 | 0.829808 | 4.18E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene95302 | 0.824394 | 8.26E-54 | -1.69E-46 |
| MS.gene056633 | MS.gene95302 | 0.837597 | 4.73E-57 | -1.69E-46 |
| MS.gene056694 | MS.gene95302 | -0.813945 | 1.98E-51 | -1.69E-46 |
| MS.gene056697 | MS.gene95302 | -0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene95302 | 0.837329 | 5.54E-57 | -1.69E-46 |
| MS.gene056988 | MS.gene95302 | -0.816135 | 6.46E-52 | -1.69E-46 |
| MS.gene057196 | MS.gene95302 | 0.831538 | 1.58E-55 | -1.69E-46 |
| MS.gene057332 | MS.gene95302 | 0.872746 | 2.51E-67 | -1.69E-46 |
| MS.gene057658 | MS.gene95302 | 0.855974 | 4.40E-62 | -1.69E-46 |
| MS.gene057717 | MS.gene95302 | -0.801647 | 8.16E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene95302 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene058076 | MS.gene95302 | -0.829086 | 6.27E-55 | -1.69E-46 |
| MS.gene058334 | MS.gene95302 | -0.814232 | 1.71E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene95302 | 0.809751 | 1.62E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene95302 | 0.821884 | 3.18E-53 | -1.69E-46 |
| MS.gene058418 | MS.gene95302 | -0.850844 | 1.31E-60 | -1.69E-46 |
| MS.gene058444 | MS.gene95302 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene95302 | 0.800637 | 1.31E-48 | -1.69E-46 |
| MS.gene058603 | MS.gene95302 | -0.823539 | 1.31E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene95302 | 0.857301 | 1.79E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene95302 | 0.866897 | 2.04E-65 | -1.69E-46 |
| MS.gene059061 | MS.gene95302 | -0.802899 | 4.51E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene95302 | 0.883342 | 4.87E-71 | -1.69E-46 |
| MS.gene05926 | MS.gene95302 | -0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene059303 | MS.gene95302 | 0.818275 | 2.13E-52 | -1.69E-46 |
| MS.gene059512 | MS.gene95302 | 0.865644 | 5.08E-65 | -1.69E-46 |
| MS.gene05960 | MS.gene95302 | -0.831379 | 1.73E-55 | -1.69E-46 |
| MS.gene059756 | MS.gene95302 | 0.807885 | 4.06E-50 | -1.69E-46 |
| MS.gene059855 | MS.gene95302 | -0.806918 | 6.51E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene95302 | 0.829103 | 6.21E-55 | -1.69E-46 |
| MS.gene060087 | MS.gene95302 | -0.824916 | 6.23E-54 | -1.69E-46 |
| MS.gene06027 | MS.gene95302 | 0.800503 | 1.40E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene95302 | 0.814881 | 1.23E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene95302 | 0.8178 | 2.73E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene95302 | 0.82747 | 1.54E-54 | -1.69E-46 |
| MS.gene061044 | MS.gene95302 | -0.829217 | 5.82E-55 | -1.69E-46 |
| MS.gene061231 | MS.gene95302 | 0.896051 | 5.34E-76 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95302.t1 | MTR_8g027985 | 97.098 | 965 | 24 | 3 | 1 | 962 | 1 | 964 | 0.0 | 1944 |
| MS.gene95302.t1 | MTR_5g009530 | 50.554 | 813 | 316 | 16 | 188 | 962 | 270 | 1034 | 0.0 | 734 |
| MS.gene95302.t1 | MTR_5g009530 | 49.134 | 751 | 297 | 15 | 188 | 900 | 270 | 973 | 0.0 | 649 |
| MS.gene95302.t1 | MTR_2g085210 | 39.928 | 834 | 398 | 18 | 197 | 962 | 77 | 875 | 3.02e-176 | 535 |
| MS.gene95302.t1 | MTR_5g009530 | 42.361 | 576 | 247 | 15 | 188 | 725 | 270 | 798 | 2.17e-121 | 389 |
| MS.gene95302.t1 | MTR_5g085250 | 44.476 | 353 | 183 | 3 | 611 | 962 | 199 | 539 | 3.61e-103 | 332 |
| MS.gene95302.t1 | MTR_5g085250 | 44.602 | 352 | 182 | 3 | 611 | 961 | 232 | 571 | 2.30e-102 | 332 |
| MS.gene95302.t1 | MTR_5g085250 | 44.602 | 352 | 182 | 3 | 611 | 961 | 336 | 675 | 4.69e-101 | 331 |
| MS.gene95302.t1 | MTR_2g085210 | 34.472 | 644 | 323 | 16 | 197 | 772 | 77 | 689 | 2.99e-94 | 314 |
| MS.gene95302.t1 | MTR_2g085210 | 34.472 | 644 | 323 | 16 | 197 | 772 | 77 | 689 | 3.09e-94 | 314 |
| MS.gene95302.t1 | MTR_2g016160 | 25.468 | 267 | 173 | 10 | 647 | 903 | 60 | 310 | 9.05e-15 | 77.0 |
| MS.gene95302.t1 | MTR_7g086360 | 23.106 | 264 | 185 | 8 | 644 | 902 | 51 | 301 | 8.20e-13 | 71.2 |
| MS.gene95302.t1 | MTR_4g071130 | 24.901 | 253 | 153 | 10 | 718 | 949 | 29 | 265 | 4.73e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95302.t1 | AT2G46340 | 50.726 | 826 | 354 | 10 | 158 | 962 | 236 | 1029 | 0.0 | 763 |
| MS.gene95302.t1 | AT2G46340 | 50.726 | 826 | 354 | 10 | 158 | 962 | 236 | 1029 | 0.0 | 763 |
| MS.gene95302.t1 | AT4G11110 | 46.228 | 835 | 408 | 15 | 133 | 962 | 238 | 1036 | 0.0 | 686 |
| MS.gene95302.t1 | AT3G15354 | 38.321 | 822 | 398 | 17 | 197 | 962 | 76 | 844 | 0.0 | 547 |
| MS.gene95302.t1 | AT3G15354 | 37.713 | 822 | 395 | 18 | 197 | 962 | 76 | 836 | 9.42e-174 | 527 |
| MS.gene95302.t1 | AT1G53090 | 42.342 | 666 | 323 | 12 | 339 | 962 | 148 | 794 | 1.82e-166 | 507 |
| MS.gene95302.t1 | AT1G53090 | 42.342 | 666 | 323 | 12 | 339 | 962 | 148 | 794 | 1.82e-166 | 507 |
| MS.gene95302.t1 | AT1G53090 | 42.342 | 666 | 323 | 12 | 339 | 962 | 148 | 794 | 1.82e-166 | 507 |
| MS.gene95302.t1 | AT3G15354 | 42.952 | 603 | 283 | 12 | 412 | 962 | 1 | 594 | 2.16e-156 | 474 |
| MS.gene95302.t1 | AT3G15354 | 42.952 | 603 | 283 | 12 | 412 | 962 | 1 | 594 | 2.16e-156 | 474 |
| MS.gene95302.t1 | AT1G53090 | 43.750 | 592 | 273 | 11 | 412 | 962 | 1 | 573 | 5.40e-155 | 469 |
| MS.gene95302.t1 | AT3G15354 | 32.753 | 632 | 320 | 15 | 197 | 772 | 76 | 658 | 3.50e-102 | 334 |
| MS.gene95302.t1 | AT2G32950 | 38.864 | 440 | 238 | 5 | 523 | 962 | 153 | 561 | 5.57e-102 | 330 |
| MS.gene95302.t1 | AT2G32950 | 38.753 | 449 | 243 | 6 | 514 | 962 | 258 | 674 | 9.06e-101 | 330 |
| MS.gene95302.t1 | AT1G53090 | 36.287 | 474 | 253 | 9 | 339 | 774 | 148 | 610 | 4.02e-87 | 292 |
| MS.gene95302.t1 | AT5G23730 | 35.417 | 336 | 176 | 14 | 649 | 958 | 41 | 361 | 8.97e-46 | 169 |
| MS.gene95302.t1 | AT5G52250 | 32.515 | 326 | 194 | 9 | 646 | 959 | 69 | 380 | 1.06e-43 | 164 |
| MS.gene95302.t1 | AT1G29260 | 26.592 | 267 | 169 | 11 | 655 | 912 | 69 | 317 | 8.10e-14 | 73.9 |
| MS.gene95302.t1 | AT1G62020 | 25.984 | 254 | 149 | 10 | 718 | 949 | 29 | 265 | 2.00e-13 | 75.5 |
| MS.gene95302.t1 | AT2G43770 | 25.658 | 304 | 196 | 13 | 644 | 931 | 48 | 337 | 1.25e-12 | 70.9 |
| MS.gene95302.t1 | AT2G47990 | 25.455 | 220 | 155 | 4 | 700 | 912 | 96 | 313 | 2.20e-11 | 68.2 |
Find 153 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTGTGACTTAACCTTTA+AGG | 0.103884 | 8.1:-73860932 | MS.gene95302:CDS |
| TCCATTACTATGACCCTTAA+AGG | 0.147618 | 8.1:+73860918 | None:intergenic |
| GCTTCTTTGCACTCAAATTT+TGG | 0.148667 | 8.1:+73863412 | None:intergenic |
| GTATATATTTAAACAGATTT+TGG | 0.151402 | 8.1:-73863658 | MS.gene95302:CDS |
| GAGTCAATCGATCCCATTTC+TGG | 0.201090 | 8.1:-73860329 | MS.gene95302:CDS |
| TTTCGTTGGTTTATCTGTTT+TGG | 0.225023 | 8.1:-73860808 | MS.gene95302:CDS |
| GTTTCCTCATTGAGCACTTC+TGG | 0.244572 | 8.1:+73863186 | None:intergenic |
| TACATTTGCCGGACTCATTA+TGG | 0.278414 | 8.1:+73861194 | None:intergenic |
| CTAGATTGTGCACACCTATT+AGG | 0.304815 | 8.1:-73864235 | MS.gene95302:CDS |
| TGAATTTATACGCGAATTAG+AGG | 0.317112 | 8.1:-73862486 | MS.gene95302:CDS |
| ATAGAACCTTGAATTCTCTT+TGG | 0.319753 | 8.1:+73862032 | None:intergenic |
| GCTTGTGACTTAACCTTTAA+GGG | 0.321542 | 8.1:-73860931 | MS.gene95302:CDS |
| CAGCTTCCTTGAGCGGGCCT+TGG | 0.322871 | 8.1:+73862132 | None:intergenic |
| AAGAACTTGAATGTAGCTTT+AGG | 0.326233 | 8.1:-73864068 | MS.gene95302:CDS |
| GAACAGACCAAGCTCTCTTT+TGG | 0.329939 | 8.1:+73861508 | None:intergenic |
| AAGAGAATTCAAGGTTCTAT+TGG | 0.336597 | 8.1:-73862029 | MS.gene95302:CDS |
| CATAATGCTTTACCTGGTAT+TGG | 0.338301 | 8.1:+73862657 | None:intergenic |
| TCTAGTTATCCTCAGTTGTT+AGG | 0.340550 | 8.1:-73863810 | MS.gene95302:CDS |
| CATCACTTCAACTGTATTCA+TGG | 0.343911 | 8.1:-73863351 | MS.gene95302:CDS |
| GAATTAGAGGCATCAAATTC+TGG | 0.345543 | 8.1:-73862473 | MS.gene95302:CDS |
| ACTGTTTGAATGACCAGAAA+TGG | 0.347885 | 8.1:+73860316 | None:intergenic |
| GTATCCCTCCACATAACTTT+AGG | 0.348953 | 8.1:-73864046 | MS.gene95302:CDS |
| TTTAAATATATACAGCCTTA+AGG | 0.364151 | 8.1:+73863668 | None:intergenic |
| CGTATTTAAGTCATGCCTTA+AGG | 0.365621 | 8.1:-73863493 | MS.gene95302:CDS |
| AGTTTGTTTCTAGTGTCTGC+TGG | 0.369423 | 8.1:-73860277 | MS.gene95302:CDS |
| TCAACAAATGTTTATAGCCT+TGG | 0.369678 | 8.1:-73863153 | MS.gene95302:CDS |
| TTTGCTTCCTTAGCTGGATC+TGG | 0.370766 | 8.1:-73864164 | MS.gene95302:CDS |
| TGAACACAACATACATTTGC+CGG | 0.379155 | 8.1:+73861183 | None:intergenic |
| TGATTATGATGGTGTGGTTC+AGG | 0.382294 | 8.1:-73861703 | MS.gene95302:intron |
| TTGTTGAAAAGTTACATGTT+AGG | 0.390189 | 8.1:-73864097 | MS.gene95302:CDS |
| ATAATGCTTTACCTGGTATT+GGG | 0.391610 | 8.1:+73862658 | None:intergenic |
| CTAATAGGTGTGCACAATCT+AGG | 0.399179 | 8.1:+73864236 | None:intergenic |
| CAAGGTTCTATTGGTTGTCT+AGG | 0.404862 | 8.1:-73862020 | MS.gene95302:CDS |
| CAGATTAAGCAAAGGACAAA+AGG | 0.405341 | 8.1:-73863946 | MS.gene95302:CDS |
| AAGGAAAATGCCTTGGGAAC+AGG | 0.405545 | 8.1:-73863448 | MS.gene95302:CDS |
| ATGATTGTTCTGTCAAACTA+TGG | 0.406776 | 8.1:-73861443 | MS.gene95302:CDS |
| ATTTAGAGAATGTTGGTAAT+GGG | 0.407051 | 8.1:-73862055 | MS.gene95302:CDS |
| TTGGGACGAGAAGACGGTTC+AGG | 0.435479 | 8.1:+73862676 | None:intergenic |
| ACCTTTAAGGGTCATAGTAA+TGG | 0.442210 | 8.1:-73860919 | MS.gene95302:CDS |
| TGCAGGTCATGATGGCCTTA+AGG | 0.446031 | 8.1:+73863478 | None:intergenic |
| TGTTCCATTGCAGGTCATGA+TGG | 0.451431 | 8.1:+73863470 | None:intergenic |
| CTGATAACTCTTTGAAGCTA+TGG | 0.453806 | 8.1:-73860993 | MS.gene95302:CDS |
| TTCGTAACACTAAAATTCCT+TGG | 0.455018 | 8.1:-73861092 | MS.gene95302:CDS |
| TTGCATATACCTTCATAGAA+AGG | 0.456350 | 8.1:+73861996 | None:intergenic |
| TGAAGAGACAGCATCTCTTA+AGG | 0.463340 | 8.1:-73863379 | MS.gene95302:CDS |
| GAGGAACTGAAGAGCATAAG+AGG | 0.464134 | 8.1:-73864286 | MS.gene95302:CDS |
| TTTGCTTCAACAAATGAACT+TGG | 0.464342 | 8.1:+73862206 | None:intergenic |
| TTCATCGCGGTCAAAACTTA+AGG | 0.464544 | 8.1:+73861893 | None:intergenic |
| AAAGAAAGGCTGTGCGTTGA+TGG | 0.465033 | 8.1:-73863291 | MS.gene95302:CDS |
| TTGAATAAAATTAAATACAT+TGG | 0.469482 | 8.1:-73863561 | MS.gene95302:CDS |
| TTGTTTGACATCTCGACGAC+GGG | 0.470055 | 8.1:+73861783 | None:intergenic |
| ATTCTTCATAATGTGATGTC+TGG | 0.471326 | 8.1:-73863762 | MS.gene95302:CDS |
| CATTTAGAGAATGTTGGTAA+TGG | 0.473306 | 8.1:-73862056 | MS.gene95302:CDS |
| TGTCTAGGACCTTTCTATGA+AGG | 0.475887 | 8.1:-73862005 | MS.gene95302:CDS |
| ATTAGGAAGGAAAATGTGAT+TGG | 0.478880 | 8.1:-73864218 | MS.gene95302:CDS |
| GCTGTGCAATATTGAGTCAT+TGG | 0.479826 | 8.1:-73862803 | MS.gene95302:CDS |
| TTTCTTCTCCAGAATTTCGT+TGG | 0.480988 | 8.1:-73860822 | MS.gene95302:intron |
| CGGCTGCAGCTTCCTTGAGC+GGG | 0.481237 | 8.1:+73862126 | None:intergenic |
| ATTCCTTGGTGTACGTTACC+TGG | 0.484841 | 8.1:-73861078 | MS.gene95302:CDS |
| GAGAAAACAGTGAAGGGAAA+GGG | 0.487106 | 8.1:-73863786 | MS.gene95302:CDS |
| GCGGCTGCAGCTTCCTTGAG+CGG | 0.488025 | 8.1:+73862125 | None:intergenic |
| TAAGACATGACAGCAAATAG+TGG | 0.492429 | 8.1:-73864311 | None:intergenic |
| CTGTTTGAATGACCAGAAAT+GGG | 0.492430 | 8.1:+73860317 | None:intergenic |
| TAAATGAGGCAATCTCCATC+TGG | 0.493793 | 8.1:+73862073 | None:intergenic |
| ATGGAACAAGGAAAATGCCT+TGG | 0.493894 | 8.1:-73863455 | MS.gene95302:CDS |
| CGTCTTCTCGTCCCAATACC+AGG | 0.496888 | 8.1:-73862669 | MS.gene95302:intron |
| CAGCATCAGAGGAATCAGTT+AGG | 0.500345 | 8.1:-73864023 | MS.gene95302:CDS |
| AGAGAAAACAGTGAAGGGAA+AGG | 0.500835 | 8.1:-73863787 | MS.gene95302:CDS |
| TATAGGAACCATAATGAGTC+CGG | 0.501767 | 8.1:-73861202 | MS.gene95302:CDS |
| ATAAAGTGAAGAAAACCTTA+AGG | 0.502155 | 8.1:-73863683 | MS.gene95302:CDS |
| CTTGTTGCAGCCAACTCAGT+TGG | 0.503279 | 8.1:-73860236 | MS.gene95302:CDS |
| AATGGGCCAAAGAGAATTCA+AGG | 0.506547 | 8.1:-73862038 | MS.gene95302:CDS |
| AATCAAGGGTTGATAAAGAA+AGG | 0.507494 | 8.1:-73863305 | MS.gene95302:CDS |
| TTGTGAGAAGCCATTGGCAC+TGG | 0.508051 | 8.1:+73860356 | None:intergenic |
| CAAAGCTCAGTTGTGTGTGC+TGG | 0.508113 | 8.1:-73861758 | MS.gene95302:CDS |
| TGGATTCAGATGTGGGATGC+AGG | 0.508695 | 8.1:-73861564 | MS.gene95302:intron |
| TTGTTTGAACGAAGATATCA+AGG | 0.514100 | 8.1:-73862330 | MS.gene95302:CDS |
| CAGATGTGGGATGCAGGCAC+TGG | 0.514655 | 8.1:-73861558 | MS.gene95302:CDS |
| TCACAAAATGCAAAGGAAGC+TGG | 0.517461 | 8.1:-73862721 | MS.gene95302:CDS |
| ATCTAGGTGACCTTGGCAAA+GGG | 0.519350 | 8.1:+73864252 | None:intergenic |
| GTAGAAAGAAATCATTCGTA+TGG | 0.520653 | 8.1:-73862305 | MS.gene95302:CDS |
| TAAGGTAGATAGTTCAATTG+TGG | 0.521276 | 8.1:+73862266 | None:intergenic |
| TTGCCTCATTTAGAGAATGT+TGG | 0.524574 | 8.1:-73862062 | MS.gene95302:CDS |
| CGGAGCACCAAAAGAGAGCT+TGG | 0.525737 | 8.1:-73861515 | MS.gene95302:CDS |
| TTTGGTCATCAAACACATGT+TGG | 0.526232 | 8.1:+73863529 | None:intergenic |
| TTACCAACATTCTCTAAATG+AGG | 0.528415 | 8.1:+73862059 | None:intergenic |
| TCGAATTTGTGAGAAGCCAT+TGG | 0.529274 | 8.1:+73860350 | None:intergenic |
| TGGAACAAGGAAAATGCCTT+GGG | 0.536920 | 8.1:-73863454 | MS.gene95302:CDS |
| TTTCACAATTCCAACTGAGT+TGG | 0.539152 | 8.1:+73860226 | None:intergenic |
| AATCTAGGTGACCTTGGCAA+AGG | 0.539545 | 8.1:+73864251 | None:intergenic |
| AACAATGTGTTTAGGATCTG+TGG | 0.540165 | 8.1:+73864115 | None:intergenic |
| CAATTCAGTTTGAAGAGAAG+TGG | 0.541430 | 8.1:-73863218 | MS.gene95302:CDS |
| CTTAAGGCATGACTTAAATA+CGG | 0.542841 | 8.1:+73863494 | None:intergenic |
| TACTTCTCCATGAGATTCCA+AGG | 0.543464 | 8.1:-73862149 | MS.gene95302:CDS |
| TGGTGTACGTTACCTGGTCA+TGG | 0.543773 | 8.1:-73861072 | MS.gene95302:CDS |
| AGATTAAGCAAAGGACAAAA+GGG | 0.544395 | 8.1:-73863945 | MS.gene95302:CDS |
| CATAATCAGTTGATGCCAGA+TGG | 0.545546 | 8.1:+73861718 | None:intergenic |
| AAGGCCATCATGACCTGCAA+TGG | 0.548595 | 8.1:-73863474 | MS.gene95302:CDS |
| GAGCGGGCCTTGGAATCTCA+TGG | 0.550025 | 8.1:+73862142 | None:intergenic |
| ACACTCTCAAGGGTTTGTCT+TGG | 0.554478 | 8.1:-73863619 | MS.gene95302:CDS |
| GATGAAGACTACATTGCAGC+AGG | 0.558236 | 8.1:-73861876 | MS.gene95302:CDS |
| GTTAGGAGAGAAAACAGTGA+AGG | 0.558766 | 8.1:-73863793 | MS.gene95302:CDS |
| AAGCAGTGATAAAAGTGTGA+TGG | 0.568908 | 8.1:-73862099 | MS.gene95302:CDS |
| TGATGCTGCCTAAAGTTATG+TGG | 0.570049 | 8.1:+73864038 | None:intergenic |
| AGAACAATCATCACTTCCAC+TGG | 0.572949 | 8.1:+73861455 | None:intergenic |
| TAAGGGTCATAGTAATGGAA+AGG | 0.576196 | 8.1:-73860914 | MS.gene95302:intron |
| GAGATTCCAAGGCCCGCTCA+AGG | 0.576812 | 8.1:-73862138 | MS.gene95302:CDS |
| TTAGGAGAGAAAACAGTGAA+GGG | 0.577733 | 8.1:-73863792 | MS.gene95302:CDS |
| AAAGTGTGATGGAAACCAGA+TGG | 0.581140 | 8.1:-73862088 | MS.gene95302:CDS |
| CTGGTATTGGGACGAGAAGA+CGG | 0.587976 | 8.1:+73862670 | None:intergenic |
| TCATGACCTGCAATGGAACA+AGG | 0.588932 | 8.1:-73863467 | MS.gene95302:CDS |
| CAAATCTCTACCAGTGCCAA+TGG | 0.588939 | 8.1:-73860366 | MS.gene95302:CDS |
| AGGAGGTCCAGATCCAGCTA+AGG | 0.590988 | 8.1:+73864157 | None:intergenic |
| GTGCACAATCTAGGTGACCT+TGG | 0.592426 | 8.1:+73864245 | None:intergenic |
| GGTTAAGTCACAAGCATCAG+AGG | 0.593665 | 8.1:+73860939 | None:intergenic |
| ATGACAGCAAATAGTGGGAG+AGG | 0.595178 | 8.1:-73864305 | MS.gene95302:CDS |
| TTGGATGGATACATTGCATG+TGG | 0.600527 | 8.1:-73860789 | MS.gene95302:CDS |
| TCGGCTGATTACAAAGTGTA+CGG | 0.605940 | 8.1:-73861123 | MS.gene95302:CDS |
| TTGTTTCTAGTGTCTGCTGG+AGG | 0.606239 | 8.1:-73860274 | MS.gene95302:CDS |
| AAGACATGACAGCAAATAGT+GGG | 0.611577 | 8.1:-73864310 | None:intergenic |
| GCACAGGTATCCTGTTCCCA+AGG | 0.614629 | 8.1:+73863438 | None:intergenic |
| GGCGATAAGACGAAACAAGA+CGG | 0.617468 | 8.1:+73863585 | None:intergenic |
| ATTTCTATCACAAAATGCAA+AGG | 0.621491 | 8.1:-73862728 | MS.gene95302:CDS |
| AATTGTGAAACTACTTCAGA+TGG | 0.626139 | 8.1:-73860213 | MS.gene95302:CDS |
| ATTGTGCACACCTATTAGGA+AGG | 0.627489 | 8.1:-73864231 | MS.gene95302:CDS |
| CTGGCATCAACTGATTATGA+TGG | 0.627873 | 8.1:-73861714 | MS.gene95302:CDS |
| TTTGTTTGACATCTCGACGA+CGG | 0.632482 | 8.1:+73861782 | None:intergenic |
| GAAGACTACATTGCAGCAGG+TGG | 0.632505 | 8.1:-73861873 | MS.gene95302:CDS |
| AAATCAATGACCCTTTGCCA+AGG | 0.639148 | 8.1:-73864262 | MS.gene95302:CDS |
| ATCAACTGATTATGATGGTG+TGG | 0.639647 | 8.1:-73861709 | MS.gene95302:CDS |
| ACAAGCATCAGAGGACAACT+CGG | 0.642038 | 8.1:+73860948 | None:intergenic |
| TCATAATGTGATGTCTGGCG+CGG | 0.644923 | 8.1:-73863757 | MS.gene95302:CDS |
| ATAACTTTAGGCAGCATCAG+AGG | 0.649606 | 8.1:-73864034 | MS.gene95302:CDS |
| TACAGCAAGTTCGAAGAGCG+CGG | 0.652487 | 8.1:-73861963 | MS.gene95302:CDS |
| ACTTAAGGCACATATCACAT+TGG | 0.655318 | 8.1:+73861908 | None:intergenic |
| TGCTGCCTAAAGTTATGTGG+AGG | 0.655498 | 8.1:+73864041 | None:intergenic |
| ATGTGGTTCAGAATCTAATG+AGG | 0.656979 | 8.1:-73860772 | MS.gene95302:intron |
| AATCACTTGAAATAGCATTG+AGG | 0.657781 | 8.1:+73861823 | None:intergenic |
| ATGGACTCAACTTAAGAGCG+TGG | 0.658372 | 8.1:-73863722 | MS.gene95302:CDS |
| TAGCTTCAAAGAGTTATCAG+TGG | 0.667175 | 8.1:+73860996 | None:intergenic |
| AAATCACTCAGATTAAGCAA+AGG | 0.669333 | 8.1:-73863954 | MS.gene95302:CDS |
| TTGTCCAGAAGTGCTCAATG+AGG | 0.673641 | 8.1:-73863190 | MS.gene95302:CDS |
| TCAGCCACTGTCTCAATACA+CGG | 0.673768 | 8.1:-73861535 | MS.gene95302:CDS |
| TCAAACAGTAGTGATAACAA+TGG | 0.675011 | 8.1:-73860302 | MS.gene95302:CDS |
| AATGTGTTTAGGATCTGTGG+TGG | 0.700851 | 8.1:+73864118 | None:intergenic |
| AGATGATGTAGCTGACACAC+AGG | 0.702078 | 8.1:-73862426 | MS.gene95302:CDS |
| TGTTTGACATCTCGACGACG+GGG | 0.706101 | 8.1:+73861784 | None:intergenic |
| GCTGCCTAAAGTTATGTGGA+GGG | 0.718131 | 8.1:+73864042 | None:intergenic |
| TGCTCCGTGTATTGAGACAG+TGG | 0.719956 | 8.1:+73861531 | None:intergenic |
| TGACCAGGTAACGTACACCA+AGG | 0.738718 | 8.1:+73861075 | None:intergenic |
| CTGCAATGTAGTCTTCATCG+CGG | 0.756043 | 8.1:+73861880 | None:intergenic |
| TTTGAACGAAGATATCAAGG+AGG | 0.768052 | 8.1:-73862327 | MS.gene95302:CDS |
| CAAACTATGGAATATCAGCG+AGG | 0.779696 | 8.1:-73861430 | MS.gene95302:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAATAAAATTAAATACAT+TGG | - | chr8.1:73860952-73860971 | MS.gene95302:CDS | 10.0% |
| !!! | ATGTATTTAATTTTATTCAA+CGG | + | chr8.1:73860952-73860971 | None:intergenic | 10.0% |
| !! | ATTAAAATATCGTTTAGTTA+TGG | + | chr8.1:73863147-73863166 | None:intergenic | 15.0% |
| !! | TATTGAATTCAACTAATTAT+CGG | + | chr8.1:73864044-73864063 | None:intergenic | 15.0% |
| !! | TTATGATAAACTAATTTCTT+CGG | + | chr8.1:73863889-73863908 | None:intergenic | 15.0% |
| !!! | AAATCTTTTATTTTTTGGAT+CGG | - | chr8.1:73863371-73863390 | MS.gene95302:CDS | 15.0% |
| !!! | GTATATATTTAAACAGATTT+TGG | - | chr8.1:73860855-73860874 | MS.gene95302:intron | 15.0% |
| !!! | TATCTTTTTTTATGTATAAC+AGG | - | chr8.1:73861990-73862009 | MS.gene95302:CDS | 15.0% |
| !!! | TTAGTTTATCATAATTTTTG+TGG | - | chr8.1:73863895-73863914 | MS.gene95302:CDS | 15.0% |
| !!! | TTTTTCTTTTTATTACTCTA+CGG | - | chr8.1:73863921-73863940 | MS.gene95302:CDS | 15.0% |
| !! | AAAATAATTATCTCACAATG+CGG | - | chr8.1:73863267-73863286 | MS.gene95302:CDS | 20.0% |
| !! | AATAGGTTACGAATAATTAT+AGG | + | chr8.1:73861657-73861676 | None:intergenic | 20.0% |
| !! | ATAGGTTACGAATAATTATA+GGG | + | chr8.1:73861656-73861675 | None:intergenic | 20.0% |
| !! | ATTGAATTCAACTAATTATC+GGG | + | chr8.1:73864043-73864062 | None:intergenic | 20.0% |
| !! | CACTAAAATGTTAACAAAAT+AGG | + | chr8.1:73861674-73861693 | None:intergenic | 20.0% |
| !! | CACTAATTAAAATAACCATA+GGG | - | chr8.1:73861489-73861508 | MS.gene95302:CDS | 20.0% |
| !! | TCACTAATTAAAATAACCAT+AGG | - | chr8.1:73861488-73861507 | MS.gene95302:CDS | 20.0% |
| !! | TCCAAAAAATAAAAGATTTG+TGG | + | chr8.1:73863370-73863389 | None:intergenic | 20.0% |
| !! | TGAAACTTAACAAAATATCT+TGG | + | chr8.1:73861471-73861490 | None:intergenic | 20.0% |
| !! | TTTAAATATATACAGCCTTA+AGG | + | chr8.1:73860848-73860867 | None:intergenic | 20.0% |
| !!! | AGATCTACTAATAATTTTAC+TGG | + | chr8.1:73862284-73862303 | None:intergenic | 20.0% |
| !!! | ATTTAAACAGATTTTGGAAT+TGG | - | chr8.1:73860861-73860880 | MS.gene95302:intron | 20.0% |
| !!! | CTATTTTGTTAACATTTTAG+TGG | - | chr8.1:73861672-73861691 | MS.gene95302:intron | 20.0% |
| !!! | TCCACAAATCTTTTATTTTT+TGG | - | chr8.1:73863366-73863385 | MS.gene95302:CDS | 20.0% |
| !!! | TCTGAATGTATGATTTTTAA+TGG | - | chr8.1:73861907-73861926 | MS.gene95302:CDS | 20.0% |
| ! | AACATTAATGTTATGTGACA+TGG | - | chr8.1:73862925-73862944 | MS.gene95302:intron | 25.0% |
| ! | ACAAAAGAAAACAAAAAGTG+AGG | + | chr8.1:73863646-73863665 | None:intergenic | 25.0% |
| ! | ATAAAGTGAAGAAAACCTTA+AGG | - | chr8.1:73860830-73860849 | MS.gene95302:intron | 25.0% |
| ! | ATTTCTATCACAAAATGCAA+AGG | - | chr8.1:73861785-73861804 | MS.gene95302:CDS | 25.0% |
| ! | CAGTTATATAAAAAACCATC+TGG | - | chr8.1:73862780-73862799 | MS.gene95302:CDS | 25.0% |
| ! | TGAAGAAGAAAAGAAAAAAC+AGG | - | chr8.1:73862135-73862154 | MS.gene95302:CDS | 25.0% |
| ! | TGTATCAATTTCATTTCCTA+AGG | + | chr8.1:73861538-73861557 | None:intergenic | 25.0% |
| ! | TTACTGGAAAAATCATGATA+AGG | + | chr8.1:73862268-73862287 | None:intergenic | 25.0% |
| ! | TTGAATTCAATATCAAGTGA+GGG | - | chr8.1:73864052-73864071 | MS.gene95302:CDS | 25.0% |
| ! | TTGTTGAAAAGTTACATGTT+AGG | - | chr8.1:73860416-73860435 | MS.gene95302:intron | 25.0% |
| !! | AACTTTTCAACAATGTGTTT+AGG | + | chr8.1:73860409-73860428 | None:intergenic | 25.0% |
| !! | GCATTTTGTGATAGAAATTT+TGG | + | chr8.1:73861783-73861802 | None:intergenic | 25.0% |
| !! | TATAAAGCTTTTGCGAATAT+AGG | - | chr8.1:73860625-73860644 | MS.gene95302:intron | 25.0% |
| !! | TTTTGTGATAGAAATTTTGG+CGG | + | chr8.1:73861780-73861799 | None:intergenic | 25.0% |
| !! | TTTTTGCAGAGAAATTCTAT+AGG | - | chr8.1:73863294-73863313 | MS.gene95302:CDS | 25.0% |
| !!! | ATTTAGAGAATGTTGGTAAT+GGG | - | chr8.1:73862458-73862477 | MS.gene95302:CDS | 25.0% |
| !!! | TTCTATTTTTTCTACCTTTC+AGG | - | chr8.1:73864111-73864130 | MS.gene95302:CDS | 25.0% |
| AAAAATGGACATGGAATCAA+GGG | - | chr8.1:73861194-73861213 | MS.gene95302:CDS | 30.0% | |
| AAAATATCTTGGCTATCAAG+AGG | + | chr8.1:73861460-73861479 | None:intergenic | 30.0% | |
| AAATCACTCAGATTAAGCAA+AGG | - | chr8.1:73860559-73860578 | MS.gene95302:intron | 30.0% | |
| AAGAACTTGAATGTAGCTTT+AGG | - | chr8.1:73860445-73860464 | MS.gene95302:intron | 30.0% | |
| AAGAGAATTCAAGGTTCTAT+TGG | - | chr8.1:73862484-73862503 | MS.gene95302:CDS | 30.0% | |
| AATATTGCCATTGATGTTTG+AGG | - | chr8.1:73861937-73861956 | MS.gene95302:CDS | 30.0% | |
| AATCACTTGAAATAGCATTG+AGG | + | chr8.1:73862693-73862712 | None:intergenic | 30.0% | |
| AATTGTGAAACTACTTCAGA+TGG | - | chr8.1:73864300-73864319 | MS.gene95302:CDS | 30.0% | |
| AGATTAAGCAAAGGACAAAA+GGG | - | chr8.1:73860568-73860587 | MS.gene95302:intron | 30.0% | |
| ATAATGCTTTACCTGGTATT+GGG | + | chr8.1:73861858-73861877 | None:intergenic | 30.0% | |
| ATAGAACCTTGAATTCTCTT+TGG | + | chr8.1:73862484-73862503 | None:intergenic | 30.0% | |
| ATATAGTACAATAGTCTGTC+TGG | - | chr8.1:73863799-73863818 | MS.gene95302:CDS | 30.0% | |
| ATGATTGTTCTGTCAAACTA+TGG | - | chr8.1:73863070-73863089 | MS.gene95302:intron | 30.0% | |
| ATTAGGAAGGAAAATGTGAT+TGG | - | chr8.1:73860295-73860314 | MS.gene95302:CDS | 30.0% | |
| ATTCTTCATAATGTGATGTC+TGG | - | chr8.1:73860751-73860770 | MS.gene95302:intron | 30.0% | |
| CTTAAGGCATGACTTAAATA+CGG | + | chr8.1:73861022-73861041 | None:intergenic | 30.0% | |
| GAAAAAACAGGAAGCTAAAT+TGG | - | chr8.1:73862147-73862166 | MS.gene95302:CDS | 30.0% | |
| GCACAATTTAATCAAACCTT+AGG | - | chr8.1:73861519-73861538 | MS.gene95302:CDS | 30.0% | |
| GCATAATTAATCCAAGAAGT+TGG | + | chr8.1:73861588-73861607 | None:intergenic | 30.0% | |
| GTAGAAAGAAATCATTCGTA+TGG | - | chr8.1:73862208-73862227 | MS.gene95302:CDS | 30.0% | |
| GTTGAATTCAATATCAAGTG+AGG | - | chr8.1:73864051-73864070 | MS.gene95302:CDS | 30.0% | |
| TAAGGTAGATAGTTCAATTG+TGG | + | chr8.1:73862250-73862269 | None:intergenic | 30.0% | |
| TCAAACAGTAGTGATAACAA+TGG | - | chr8.1:73864211-73864230 | MS.gene95302:CDS | 30.0% | |
| TCAACAAATGTTTATAGCCT+TGG | - | chr8.1:73861360-73861379 | MS.gene95302:intron | 30.0% | |
| TGAATTTATACGCGAATTAG+AGG | - | chr8.1:73862027-73862046 | MS.gene95302:CDS | 30.0% | |
| TTAATGTTATGTGACATGGT+TGG | - | chr8.1:73862929-73862948 | MS.gene95302:intron | 30.0% | |
| TTACCAACATTCTCTAAATG+AGG | + | chr8.1:73862457-73862476 | None:intergenic | 30.0% | |
| TTCGTAACACTAAAATTCCT+TGG | - | chr8.1:73863421-73863440 | MS.gene95302:CDS | 30.0% | |
| TTGCATATACCTTCATAGAA+AGG | + | chr8.1:73862520-73862539 | None:intergenic | 30.0% | |
| TTGTTTGAACGAAGATATCA+AGG | - | chr8.1:73862183-73862202 | MS.gene95302:CDS | 30.0% | |
| TTTGCTTCAACAAATGAACT+TGG | + | chr8.1:73862310-73862329 | None:intergenic | 30.0% | |
| ! | ATACGGTGAAACATGATTTT+TGG | + | chr8.1:73861005-73861024 | None:intergenic | 30.0% |
| ! | ATCACATTTTCCTTCCTAAT+AGG | + | chr8.1:73860295-73860314 | None:intergenic | 30.0% |
| ! | CATTTAGAGAATGTTGGTAA+TGG | - | chr8.1:73862457-73862476 | MS.gene95302:CDS | 30.0% |
| ! | TTTTGCGAATATAGGCAATA+TGG | - | chr8.1:73860633-73860652 | MS.gene95302:intron | 30.0% |
| !! | AATCAAGGGTTGATAAAGAA+AGG | - | chr8.1:73861208-73861227 | MS.gene95302:CDS | 30.0% |
| !!! | TTTCGTTGGTTTATCTGTTT+TGG | - | chr8.1:73863705-73863724 | MS.gene95302:CDS | 30.0% |
| ACTTAAGGCACATATCACAT+TGG | + | chr8.1:73862608-73862627 | None:intergenic | 35.0% | |
| ATGTAGCGTAGAATGTGAAA+CGG | + | chr8.1:73863862-73863881 | None:intergenic | 35.0% | |
| ATGTGGTTCAGAATCTAATG+AGG | - | chr8.1:73863741-73863760 | MS.gene95302:CDS | 35.0% | |
| CAAAAATGGACATGGAATCA+AGG | - | chr8.1:73861193-73861212 | MS.gene95302:CDS | 35.0% | |
| CAATTCAGTTTGAAGAGAAG+TGG | - | chr8.1:73861295-73861314 | MS.gene95302:intron | 35.0% | |
| CAGATAAACCAACGAAATTC+TGG | + | chr8.1:73863702-73863721 | None:intergenic | 35.0% | |
| CAGATTAAGCAAAGGACAAA+AGG | - | chr8.1:73860567-73860586 | MS.gene95302:intron | 35.0% | |
| CATAATGCTTTACCTGGTAT+TGG | + | chr8.1:73861859-73861878 | None:intergenic | 35.0% | |
| CATCACTTCAACTGTATTCA+TGG | - | chr8.1:73861162-73861181 | MS.gene95302:CDS | 35.0% | |
| CGTATTTAAGTCATGCCTTA+AGG | - | chr8.1:73861020-73861039 | MS.gene95302:CDS | 35.0% | |
| CTATCAAGAGGAAATTATGC+AGG | + | chr8.1:73861448-73861467 | None:intergenic | 35.0% | |
| GAACAAAAACTAGTACTAGG+AGG | + | chr8.1:73860376-73860395 | None:intergenic | 35.0% | |
| GAATAGTCCTCAAACATCAA+TGG | + | chr8.1:73861947-73861966 | None:intergenic | 35.0% | |
| GAGGAAATTATGCAGGATAA+AGG | + | chr8.1:73861441-73861460 | None:intergenic | 35.0% | |
| GCTTGTGACTTAACCTTTAA+GGG | - | chr8.1:73863582-73863601 | MS.gene95302:CDS | 35.0% | |
| GTGATAACAGTAAACCTGAA+AGG | + | chr8.1:73864128-73864147 | None:intergenic | 35.0% | |
| GTGGAACAAAAACTAGTACT+AGG | + | chr8.1:73860379-73860398 | None:intergenic | 35.0% | |
| TAGCTTCAAAGAGTTATCAG+TGG | + | chr8.1:73863520-73863539 | None:intergenic | 35.0% | |
| TATAGGAACCATAATGAGTC+CGG | - | chr8.1:73863311-73863330 | MS.gene95302:CDS | 35.0% | |
| TCCATTACTATGACCCTTAA+AGG | + | chr8.1:73863598-73863617 | None:intergenic | 35.0% | |
| TCTAGTTATCCTCAGTTGTT+AGG | - | chr8.1:73860703-73860722 | MS.gene95302:intron | 35.0% | |
| TGAACACAACATACATTTGC+CGG | + | chr8.1:73863333-73863352 | None:intergenic | 35.0% | |
| TGCTTGTGACTTAACCTTTA+AGG | - | chr8.1:73863581-73863600 | MS.gene95302:CDS | 35.0% | |
| TTAGGAGAGAAAACAGTGAA+GGG | - | chr8.1:73860721-73860740 | MS.gene95302:intron | 35.0% | |
| TTCACATTCTACGCTACATT+TGG | - | chr8.1:73863863-73863882 | MS.gene95302:CDS | 35.0% | |
| TTGCCTCATTTAGAGAATGT+TGG | - | chr8.1:73862451-73862470 | MS.gene95302:CDS | 35.0% | |
| TTTCACAATTCCAACTGAGT+TGG | + | chr8.1:73864290-73864309 | None:intergenic | 35.0% | |
| TTTCTTCTCCAGAATTTCGT+TGG | - | chr8.1:73863691-73863710 | MS.gene95302:CDS | 35.0% | |
| TTTGAACGAAGATATCAAGG+AGG | - | chr8.1:73862186-73862205 | MS.gene95302:CDS | 35.0% | |
| TTTGGTCATCAAACACATGT+TGG | + | chr8.1:73860987-73861006 | None:intergenic | 35.0% | |
| ! | AACAATGTGTTTAGGATCTG+TGG | + | chr8.1:73860401-73860420 | None:intergenic | 35.0% |
| ! | AAGCAGTGATAAAAGTGTGA+TGG | - | chr8.1:73862414-73862433 | MS.gene95302:CDS | 35.0% |
| ! | ACCTTTAAGGGTCATAGTAA+TGG | - | chr8.1:73863594-73863613 | MS.gene95302:CDS | 35.0% |
| ! | AGAAATTTTGCTTCCTTAGC+TGG | - | chr8.1:73860343-73860362 | MS.gene95302:CDS | 35.0% |
| ! | ATCAACTGATTATGATGGTG+TGG | - | chr8.1:73862804-73862823 | MS.gene95302:CDS | 35.0% |
| ! | CAAGTTTTCTTCCAACTTCT+TGG | - | chr8.1:73861574-73861593 | MS.gene95302:intron | 35.0% |
| ! | CACACTTTTATCACTGCTTT+TGG | + | chr8.1:73862413-73862432 | None:intergenic | 35.0% |
| ! | GCTTCTTTGCACTCAAATTT+TGG | + | chr8.1:73861104-73861123 | None:intergenic | 35.0% |
| ! | TAAGGGTCATAGTAATGGAA+AGG | - | chr8.1:73863599-73863618 | MS.gene95302:CDS | 35.0% |
| ! | TTATTACTCTACGGCGTTTT+GGG | - | chr8.1:73863930-73863949 | MS.gene95302:CDS | 35.0% |
| ! | TTCCACTGGCAAACATTTTT+GGG | + | chr8.1:73863047-73863066 | None:intergenic | 35.0% |
| ! | TTGATTTTGCACACTCTCAA+GGG | - | chr8.1:73860884-73860903 | MS.gene95302:intron | 35.0% |
| ! | TTTATTACTCTACGGCGTTT+TGG | - | chr8.1:73863929-73863948 | MS.gene95302:CDS | 35.0% |
| !! | ACTTTTATCACTGCTTTTGG+CGG | + | chr8.1:73862410-73862429 | None:intergenic | 35.0% |
| !! | CTGATAACTCTTTGAAGCTA+TGG | - | chr8.1:73863520-73863539 | MS.gene95302:CDS | 35.0% |
| !! | GAATTAGAGGCATCAAATTC+TGG | - | chr8.1:73862040-73862059 | MS.gene95302:CDS | 35.0% |
| !! | GTTGGTTTATCTGTTTTGGA+TGG | - | chr8.1:73863709-73863728 | MS.gene95302:CDS | 35.0% |
| AAATCAATGACCCTTTGCCA+AGG | - | chr8.1:73860251-73860270 | MS.gene95302:CDS | 40.0% | |
| AATGGGCCAAAGAGAATTCA+AGG | - | chr8.1:73862475-73862494 | MS.gene95302:CDS | 40.0% | |
| AATTGTGCATAACAGCCCTA+TGG | + | chr8.1:73861507-73861526 | None:intergenic | 40.0% | |
| ACATGGTTGGATTCAGATGT+GGG | - | chr8.1:73862942-73862961 | MS.gene95302:intron | 40.0% | |
| AGAACAATCATCACTTCCAC+TGG | + | chr8.1:73863061-73863080 | None:intergenic | 40.0% | |
| AGAGAAAACAGTGAAGGGAA+AGG | - | chr8.1:73860726-73860745 | MS.gene95302:intron | 40.0% | |
| ATAACTTTAGGCAGCATCAG+AGG | - | chr8.1:73860479-73860498 | MS.gene95302:intron | 40.0% | |
| ATGGAACAAGGAAAATGCCT+TGG | - | chr8.1:73861058-73861077 | MS.gene95302:CDS | 40.0% | |
| ATTGTGCACACCTATTAGGA+AGG | - | chr8.1:73860282-73860301 | MS.gene95302:CDS | 40.0% | |
| CAAACTATGGAATATCAGCG+AGG | - | chr8.1:73863083-73863102 | MS.gene95302:intron | 40.0% | |
| CCTCAAAAAGAAGAACTCCA+AGG | + | chr8.1:73861380-73861399 | None:intergenic | 40.0% | |
| CTAATAGGTGTGCACAATCT+AGG | + | chr8.1:73860280-73860299 | None:intergenic | 40.0% | |
| CTAGATTGTGCACACCTATT+AGG | - | chr8.1:73860278-73860297 | MS.gene95302:CDS | 40.0% | |
| CTGGCATCAACTGATTATGA+TGG | - | chr8.1:73862799-73862818 | MS.gene95302:CDS | 40.0% | |
| CTGTGACACAAAAATGGACA+TGG | - | chr8.1:73861185-73861204 | MS.gene95302:CDS | 40.0% | |
| GAGAAAACAGTGAAGGGAAA+GGG | - | chr8.1:73860727-73860746 | MS.gene95302:intron | 40.0% | |
| GCTGTGCAATATTGAGTCAT+TGG | - | chr8.1:73861710-73861729 | MS.gene95302:CDS | 40.0% | |
| GTATCCCTCCACATAACTTT+AGG | - | chr8.1:73860467-73860486 | MS.gene95302:intron | 40.0% | |
| GTTAGGAGAGAAAACAGTGA+AGG | - | chr8.1:73860720-73860739 | MS.gene95302:intron | 40.0% | |
| TAAATGAGGCAATCTCCATC+TGG | + | chr8.1:73862443-73862462 | None:intergenic | 40.0% | |
| TAATTATCGGGTATCTGCGA+AGG | + | chr8.1:73864031-73864050 | None:intergenic | 40.0% | |
| TACATTTGCCGGACTCATTA+TGG | + | chr8.1:73863322-73863341 | None:intergenic | 40.0% | |
| TACTTCTCCATGAGATTCCA+AGG | - | chr8.1:73862364-73862383 | MS.gene95302:CDS | 40.0% | |
| TCACAAAATGCAAAGGAAGC+TGG | - | chr8.1:73861792-73861811 | MS.gene95302:CDS | 40.0% | |
| TCATGGCTGTGACACAAAAA+TGG | - | chr8.1:73861179-73861198 | MS.gene95302:CDS | 40.0% | |
| TCGAATTTGTGAGAAGCCAT+TGG | + | chr8.1:73864166-73864185 | None:intergenic | 40.0% | |
| TCGGCTGATTACAAAGTGTA+CGG | - | chr8.1:73863390-73863409 | MS.gene95302:CDS | 40.0% | |
| TGAAGAGACAGCATCTCTTA+AGG | - | chr8.1:73861134-73861153 | MS.gene95302:CDS | 40.0% | |
| TGATGCTGCCTAAAGTTATG+TGG | + | chr8.1:73860478-73860497 | None:intergenic | 40.0% | |
| TGGAACAAGGAAAATGCCTT+GGG | - | chr8.1:73861059-73861078 | MS.gene95302:CDS | 40.0% | |
| TTCATCGCGGTCAAAACTTA+AGG | + | chr8.1:73862623-73862642 | None:intergenic | 40.0% | |
| TTGGATGGATACATTGCATG+TGG | - | chr8.1:73863724-73863743 | MS.gene95302:CDS | 40.0% | |
| TTTGTTTGACATCTCGACGA+CGG | + | chr8.1:73862734-73862753 | None:intergenic | 40.0% | |
| ! | AAAGTGTGATGGAAACCAGA+TGG | - | chr8.1:73862425-73862444 | MS.gene95302:CDS | 40.0% |
| ! | AATGTGTTTAGGATCTGTGG+TGG | + | chr8.1:73860398-73860417 | None:intergenic | 40.0% |
| ! | CAAGGTTCTATTGGTTGTCT+AGG | - | chr8.1:73862493-73862512 | MS.gene95302:CDS | 40.0% |
| ! | CATAATCAGTTGATGCCAGA+TGG | + | chr8.1:73862798-73862817 | None:intergenic | 40.0% |
| ! | CATTTTCCTTGTTCCATTGC+AGG | + | chr8.1:73861055-73861074 | None:intergenic | 40.0% |
| ! | CCTTGGAGTTCTTCTTTTTG+AGG | - | chr8.1:73861377-73861396 | MS.gene95302:intron | 40.0% |
| ! | CTTCCACTGGCAAACATTTT+TGG | + | chr8.1:73863048-73863067 | None:intergenic | 40.0% |
| ! | GGTCATAGTAATGGAAAGGT+TGG | - | chr8.1:73863603-73863622 | MS.gene95302:CDS | 40.0% |
| ! | GTTTTCTCTCCTAACAACTG+AGG | + | chr8.1:73860715-73860734 | None:intergenic | 40.0% |
| ! | TGATTATGATGGTGTGGTTC+AGG | - | chr8.1:73862810-73862829 | MS.gene95302:intron | 40.0% |
| ! | TGTCTAGGACCTTTCTATGA+AGG | - | chr8.1:73862508-73862527 | MS.gene95302:intron | 40.0% |
| !! | ACTCAAATTTTGGCATGCAC+AGG | + | chr8.1:73861094-73861113 | None:intergenic | 40.0% |
| !! | AGCTTGGTCTGTTCACTTTT+CGG | - | chr8.1:73863014-73863033 | MS.gene95302:intron | 40.0% |
| !! | AGTTTGTTTCTAGTGTCTGC+TGG | - | chr8.1:73864236-73864255 | MS.gene95302:CDS | 40.0% |
| !! | GTTGATTTTGCACACTCTCA+AGG | - | chr8.1:73860883-73860902 | MS.gene95302:intron | 40.0% |
| !!! | ACTGGCAAACATTTTTGGGT+CGG | + | chr8.1:73863043-73863062 | None:intergenic | 40.0% |
| !!! | AGGAAGCTGGTTTTTGTCTA+TGG | - | chr8.1:73861805-73861824 | MS.gene95302:CDS | 40.0% |
| AAAGAAAGGCTGTGCGTTGA+TGG | - | chr8.1:73861222-73861241 | MS.gene95302:intron | 45.0% | |
| AAGGAAAATGCCTTGGGAAC+AGG | - | chr8.1:73861065-73861084 | MS.gene95302:CDS | 45.0% | |
| AATCTAGGTGACCTTGGCAA+AGG | + | chr8.1:73860265-73860284 | None:intergenic | 45.0% | |
| ACAAGCATCAGAGGACAACT+CGG | + | chr8.1:73863568-73863587 | None:intergenic | 45.0% | |
| ACACTCTCAAGGGTTTGTCT+TGG | - | chr8.1:73860894-73860913 | MS.gene95302:intron | 45.0% | |
| AGATGATGTAGCTGACACAC+AGG | - | chr8.1:73862087-73862106 | MS.gene95302:CDS | 45.0% | |
| ATCTAGGTGACCTTGGCAAA+GGG | + | chr8.1:73860264-73860283 | None:intergenic | 45.0% | |
| ATGGACTCAACTTAAGAGCG+TGG | - | chr8.1:73860791-73860810 | MS.gene95302:CDS | 45.0% | |
| CAAATCTCTACCAGTGCCAA+TGG | - | chr8.1:73864147-73864166 | MS.gene95302:CDS | 45.0% | |
| CAATAGTCTGTCTGGATCTC+TGG | - | chr8.1:73863807-73863826 | MS.gene95302:CDS | 45.0% | |
| CAGCAGCATAATGCTTTACC+TGG | + | chr8.1:73861865-73861884 | None:intergenic | 45.0% | |
| CAGCATCAGAGGAATCAGTT+AGG | - | chr8.1:73860490-73860509 | MS.gene95302:intron | 45.0% | |
| CTGCAATGTAGTCTTCATCG+CGG | + | chr8.1:73862636-73862655 | None:intergenic | 45.0% | |
| GACATGGTTGGATTCAGATG+TGG | - | chr8.1:73862941-73862960 | MS.gene95302:intron | 45.0% | |
| GACCCAAAAATGTTTGCCAG+TGG | - | chr8.1:73863042-73863061 | MS.gene95302:intron | 45.0% | |
| GAGTCAATCGATCCCATTTC+TGG | - | chr8.1:73864184-73864203 | MS.gene95302:CDS | 45.0% | |
| GATGAAGACTACATTGCAGC+AGG | - | chr8.1:73862637-73862656 | MS.gene95302:intron | 45.0% | |
| GCTGCCTAAAGTTATGTGGA+GGG | + | chr8.1:73860474-73860493 | None:intergenic | 45.0% | |
| GGCGATAAGACGAAACAAGA+CGG | + | chr8.1:73860931-73860950 | None:intergenic | 45.0% | |
| GGTTAAGTCACAAGCATCAG+AGG | + | chr8.1:73863577-73863596 | None:intergenic | 45.0% | |
| GTTTCCTCATTGAGCACTTC+TGG | + | chr8.1:73861330-73861349 | None:intergenic | 45.0% | |
| TCAGCCACTGTCTCAATACA+CGG | - | chr8.1:73862978-73862997 | MS.gene95302:intron | 45.0% | |
| TCATAATGTGATGTCTGGCG+CGG | - | chr8.1:73860756-73860775 | MS.gene95302:intron | 45.0% | |
| TCATGACCTGCAATGGAACA+AGG | - | chr8.1:73861046-73861065 | MS.gene95302:CDS | 45.0% | |
| TGCTGCCTAAAGTTATGTGG+AGG | + | chr8.1:73860475-73860494 | None:intergenic | 45.0% | |
| TGTTCCATTGCAGGTCATGA+TGG | + | chr8.1:73861046-73861065 | None:intergenic | 45.0% | |
| TTGTTTGACATCTCGACGAC+GGG | + | chr8.1:73862733-73862752 | None:intergenic | 45.0% | |
| TTTGCTTCCTTAGCTGGATC+TGG | - | chr8.1:73860349-73860368 | MS.gene95302:CDS | 45.0% | |
| ! | ATGACAGCAAATAGTGGGAG+AGG | - | chr8.1:73860208-73860227 | MS.gene95302:CDS | 45.0% |
| ! | ATTCCTTGGTGTACGTTACC+TGG | - | chr8.1:73863435-73863454 | MS.gene95302:CDS | 45.0% |
| ! | CTAACAGCTTTTCCATGACC+AGG | + | chr8.1:73863456-73863475 | None:intergenic | 45.0% |
| ! | GAACAGACCAAGCTCTCTTT+TGG | + | chr8.1:73863008-73863027 | None:intergenic | 45.0% |
| ! | GAGGAACTGAAGAGCATAAG+AGG | - | chr8.1:73860227-73860246 | MS.gene95302:CDS | 45.0% |
| !! | TTGTCCAGAAGTGCTCAATG+AGG | - | chr8.1:73861323-73861342 | MS.gene95302:intron | 45.0% |
| !! | TTGTTTCTAGTGTCTGCTGG+AGG | - | chr8.1:73864239-73864258 | MS.gene95302:CDS | 45.0% |
| AAGGCCATCATGACCTGCAA+TGG | - | chr8.1:73861039-73861058 | MS.gene95302:CDS | 50.0% | |
| CAAAGCTCAGTTGTGTGTGC+TGG | - | chr8.1:73862755-73862774 | MS.gene95302:CDS | 50.0% | |
| CTTGTTGCAGCCAACTCAGT+TGG | - | chr8.1:73864277-73864296 | MS.gene95302:CDS | 50.0% | |
| GAAGACTACATTGCAGCAGG+TGG | - | chr8.1:73862640-73862659 | MS.gene95302:intron | 50.0% | |
| GTGCACAATCTAGGTGACCT+TGG | + | chr8.1:73860271-73860290 | None:intergenic | 50.0% | |
| TACAGCAAGTTCGAAGAGCG+CGG | - | chr8.1:73862550-73862569 | MS.gene95302:intron | 50.0% | |
| TGACCAGGTAACGTACACCA+AGG | + | chr8.1:73863441-73863460 | None:intergenic | 50.0% | |
| TGCTCCGTGTATTGAGACAG+TGG | + | chr8.1:73862985-73863004 | None:intergenic | 50.0% | |
| TGGATTCAGATGTGGGATGC+AGG | - | chr8.1:73862949-73862968 | MS.gene95302:intron | 50.0% | |
| TGGTGTACGTTACCTGGTCA+TGG | - | chr8.1:73863441-73863460 | MS.gene95302:CDS | 50.0% | |
| TGTTTGACATCTCGACGACG+GGG | + | chr8.1:73862732-73862751 | None:intergenic | 50.0% | |
| TTGTGAGAAGCCATTGGCAC+TGG | + | chr8.1:73864160-73864179 | None:intergenic | 50.0% | |
| ! | CTGGTATTGGGACGAGAAGA+CGG | + | chr8.1:73861846-73861865 | None:intergenic | 50.0% |
| ! | TGCAGGTCATGATGGCCTTA+AGG | + | chr8.1:73861038-73861057 | None:intergenic | 50.0% |
| !!! | GGCGCGGAATGTTTTAACGA+TGG | - | chr8.1:73860772-73860791 | MS.gene95302:intron | 50.0% |
| AGGAGGTCCAGATCCAGCTA+AGG | + | chr8.1:73860359-73860378 | None:intergenic | 55.0% | |
| CGTCTTCTCGTCCCAATACC+AGG | - | chr8.1:73861844-73861863 | MS.gene95302:CDS | 55.0% | |
| GCACAGGTATCCTGTTCCCA+AGG | + | chr8.1:73861078-73861097 | None:intergenic | 55.0% | |
| TTGGGACGAGAAGACGGTTC+AGG | + | chr8.1:73861840-73861859 | None:intergenic | 55.0% | |
| ! | CGGAGCACCAAAAGAGAGCT+TGG | - | chr8.1:73862998-73863017 | MS.gene95302:intron | 55.0% |
| CAGATGTGGGATGCAGGCAC+TGG | - | chr8.1:73862955-73862974 | MS.gene95302:intron | 60.0% | |
| GAGATTCCAAGGCCCGCTCA+AGG | - | chr8.1:73862375-73862394 | MS.gene95302:CDS | 60.0% | |
| GAGCGGGCCTTGGAATCTCA+TGG | + | chr8.1:73862374-73862393 | None:intergenic | 60.0% | |
| CAGCTTCCTTGAGCGGGCCT+TGG | + | chr8.1:73862384-73862403 | None:intergenic | 65.0% | |
| CGGCTGCAGCTTCCTTGAGC+GGG | + | chr8.1:73862390-73862409 | None:intergenic | 65.0% | |
| GCGGCTGCAGCTTCCTTGAG+CGG | + | chr8.1:73862391-73862410 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 73860208 | 73864327 | 73860208 | ID=MS.gene95302 |
| chr8.1 | mRNA | 73860208 | 73864327 | 73860208 | ID=MS.gene95302.t1;Parent=MS.gene95302 |
| chr8.1 | exon | 73863137 | 73864327 | 73863137 | ID=MS.gene95302.t1.exon1;Parent=MS.gene95302.t1 |
| chr8.1 | CDS | 73863137 | 73864327 | 73863137 | ID=cds.MS.gene95302.t1;Parent=MS.gene95302.t1 |
| chr8.1 | exon | 73862670 | 73862827 | 73862670 | ID=MS.gene95302.t1.exon2;Parent=MS.gene95302.t1 |
| chr8.1 | CDS | 73862670 | 73862827 | 73862670 | ID=cds.MS.gene95302.t1;Parent=MS.gene95302.t1 |
| chr8.1 | exon | 73861704 | 73862523 | 73861704 | ID=MS.gene95302.t1.exon3;Parent=MS.gene95302.t1 |
| chr8.1 | CDS | 73861704 | 73862523 | 73861704 | ID=cds.MS.gene95302.t1;Parent=MS.gene95302.t1 |
| chr8.1 | exon | 73861431 | 73861577 | 73861431 | ID=MS.gene95302.t1.exon4;Parent=MS.gene95302.t1 |
| chr8.1 | CDS | 73861431 | 73861577 | 73861431 | ID=cds.MS.gene95302.t1;Parent=MS.gene95302.t1 |
| chr8.1 | exon | 73860915 | 73861232 | 73860915 | ID=MS.gene95302.t1.exon5;Parent=MS.gene95302.t1 |
| chr8.1 | CDS | 73860915 | 73861232 | 73860915 | ID=cds.MS.gene95302.t1;Parent=MS.gene95302.t1 |
| chr8.1 | exon | 73860773 | 73860832 | 73860773 | ID=MS.gene95302.t1.exon6;Parent=MS.gene95302.t1 |
| chr8.1 | CDS | 73860773 | 73860832 | 73860773 | ID=cds.MS.gene95302.t1;Parent=MS.gene95302.t1 |
| chr8.1 | exon | 73860208 | 73860402 | 73860208 | ID=MS.gene95302.t1.exon7;Parent=MS.gene95302.t1 |
| chr8.1 | CDS | 73860208 | 73860402 | 73860208 | ID=cds.MS.gene95302.t1;Parent=MS.gene95302.t1 |
| Gene Sequence |
| Protein sequence |
