Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06287.t1 | XP_003602742.1 | 96 | 272 | 10 | 1 | 1 | 271 | 1 | 272 | 1.20E-142 | 515.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06287.t1 | Q55CU8 | 34.1 | 205 | 128 | 2 | 66 | 263 | 73 | 277 | 4.9e-23 | 109.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06287.t1 | G7J392 | 96.0 | 272 | 10 | 1 | 1 | 271 | 1 | 272 | 8.9e-143 | 515.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene06287 | 0.996948 | 1.43E-234 | -1.69E-46 |
| MS.gene050426 | MS.gene06287 | -0.82736 | 1.63E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene06287 | 0.80631 | 8.75E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene06287 | 0.830351 | 3.08E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene06287 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene06287 | 0.813596 | 2.36E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene06287 | 0.801671 | 8.07E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene06287 | 0.8509 | 1.26E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene06287 | 0.843482 | 1.36E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene06287 | 0.804462 | 2.14E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene06287 | 0.832316 | 1.01E-55 | -1.69E-46 |
| MS.gene052469 | MS.gene06287 | 0.820516 | 6.58E-53 | -1.69E-46 |
| MS.gene054556 | MS.gene06287 | 0.803932 | 2.75E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene06287 | 0.805385 | 1.37E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene06287 | 0.820691 | 6.00E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene06287 | 0.830652 | 2.60E-55 | -1.69E-46 |
| MS.gene056719 | MS.gene06287 | 0.815069 | 1.12E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene06287 | 0.801873 | 7.33E-49 | -1.69E-46 |
| MS.gene057440 | MS.gene06287 | -0.810571 | 1.08E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene06287 | 0.824071 | 9.84E-54 | -1.69E-46 |
| MS.gene058276 | MS.gene06287 | 0.804253 | 2.36E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene06287 | 0.817947 | 2.53E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene06287 | 0.81471 | 1.34E-51 | -1.69E-46 |
| MS.gene059285 | MS.gene06287 | 0.823388 | 1.42E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene06287 | 0.815595 | 8.53E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene06287 | 0.81209 | 5.05E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene06287 | 0.810303 | 1.23E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene06287 | 0.826987 | 2.01E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene06287 | 0.8329 | 7.26E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06287.t1 | MTR_3g098530 | 95.956 | 272 | 10 | 1 | 1 | 271 | 1 | 272 | 0.0 | 530 |
| MS.gene06287.t1 | MTR_8g096180 | 75.000 | 232 | 58 | 0 | 40 | 271 | 21 | 252 | 3.13e-134 | 379 |
| MS.gene06287.t1 | MTR_8g096170 | 73.593 | 231 | 61 | 0 | 40 | 270 | 24 | 254 | 7.25e-131 | 371 |
| MS.gene06287.t1 | MTR_8g096180 | 71.901 | 242 | 58 | 1 | 40 | 271 | 21 | 262 | 9.82e-131 | 371 |
| MS.gene06287.t1 | MTR_1g032580 | 37.975 | 237 | 138 | 4 | 39 | 270 | 5 | 237 | 1.24e-54 | 177 |
| MS.gene06287.t1 | MTR_1g032580 | 38.421 | 190 | 111 | 3 | 86 | 270 | 1 | 189 | 9.10e-46 | 152 |
| MS.gene06287.t1 | MTR_1g022185 | 31.224 | 237 | 152 | 6 | 34 | 262 | 7 | 240 | 1.58e-29 | 113 |
| MS.gene06287.t1 | MTR_4g105450 | 35.220 | 159 | 101 | 2 | 65 | 222 | 68 | 225 | 4.51e-26 | 103 |
| MS.gene06287.t1 | MTR_4g105460 | 33.129 | 163 | 107 | 2 | 65 | 226 | 70 | 231 | 9.63e-25 | 99.8 |
| MS.gene06287.t1 | MTR_7g087500 | 28.986 | 207 | 131 | 5 | 64 | 262 | 42 | 240 | 2.60e-23 | 97.4 |
| MS.gene06287.t1 | MTR_3g097350 | 30.476 | 210 | 132 | 4 | 66 | 261 | 247 | 456 | 3.21e-22 | 96.3 |
| MS.gene06287.t1 | MTR_3g117090 | 32.794 | 247 | 145 | 9 | 35 | 261 | 62 | 307 | 6.05e-22 | 95.1 |
| MS.gene06287.t1 | MTR_3g117090 | 32.389 | 247 | 146 | 8 | 35 | 261 | 62 | 307 | 6.58e-22 | 95.1 |
| MS.gene06287.t1 | MTR_4g070720 | 33.333 | 219 | 127 | 7 | 61 | 261 | 89 | 306 | 1.58e-21 | 94.0 |
| MS.gene06287.t1 | MTR_3g112150 | 31.797 | 217 | 129 | 6 | 68 | 266 | 93 | 308 | 1.74e-21 | 94.0 |
| MS.gene06287.t1 | MTR_1g022480 | 29.856 | 278 | 173 | 11 | 10 | 266 | 51 | 327 | 7.52e-21 | 92.0 |
| MS.gene06287.t1 | MTR_1g022480 | 29.856 | 278 | 173 | 11 | 10 | 266 | 51 | 327 | 7.63e-21 | 92.0 |
| MS.gene06287.t1 | MTR_1g022480 | 29.856 | 278 | 173 | 11 | 10 | 266 | 51 | 327 | 7.92e-21 | 92.0 |
| MS.gene06287.t1 | MTR_1g104540 | 27.778 | 198 | 137 | 3 | 43 | 235 | 12 | 208 | 4.58e-20 | 89.4 |
| MS.gene06287.t1 | MTR_1g022480 | 32.558 | 215 | 126 | 8 | 70 | 266 | 30 | 243 | 5.53e-20 | 89.7 |
| MS.gene06287.t1 | MTR_3g074050 | 28.139 | 231 | 148 | 8 | 40 | 261 | 22 | 243 | 7.06e-20 | 87.8 |
| MS.gene06287.t1 | MTR_5g062310 | 28.000 | 175 | 122 | 3 | 64 | 237 | 44 | 215 | 7.51e-20 | 87.8 |
| MS.gene06287.t1 | MTR_7g056587 | 29.804 | 255 | 150 | 10 | 28 | 261 | 64 | 310 | 8.67e-20 | 89.0 |
| MS.gene06287.t1 | MTR_5g021050 | 31.535 | 241 | 143 | 8 | 43 | 263 | 50 | 288 | 8.73e-20 | 89.0 |
| MS.gene06287.t1 | MTR_7g056587 | 29.804 | 255 | 150 | 10 | 28 | 261 | 72 | 318 | 8.98e-20 | 89.0 |
| MS.gene06287.t1 | MTR_7g056587 | 29.804 | 255 | 150 | 10 | 28 | 261 | 72 | 318 | 9.38e-20 | 89.0 |
| MS.gene06287.t1 | MTR_5g021050 | 31.535 | 241 | 143 | 8 | 43 | 263 | 50 | 288 | 9.57e-20 | 88.6 |
| MS.gene06287.t1 | MTR_7g056587 | 29.804 | 255 | 150 | 10 | 28 | 261 | 86 | 332 | 1.03e-19 | 89.0 |
| MS.gene06287.t1 | MTR_3g074050 | 27.706 | 231 | 150 | 8 | 40 | 261 | 22 | 244 | 1.81e-19 | 86.7 |
| MS.gene06287.t1 | MTR_2g031610 | 29.524 | 210 | 132 | 6 | 66 | 261 | 142 | 349 | 2.66e-19 | 87.4 |
| MS.gene06287.t1 | MTR_8g095360 | 28.814 | 295 | 169 | 11 | 3 | 261 | 97 | 386 | 4.56e-19 | 86.7 |
| MS.gene06287.t1 | MTR_3g117100 | 32.093 | 215 | 127 | 7 | 65 | 261 | 107 | 320 | 5.50e-19 | 86.7 |
| MS.gene06287.t1 | MTR_8g077700 | 28.846 | 208 | 141 | 6 | 62 | 265 | 39 | 243 | 5.85e-19 | 84.7 |
| MS.gene06287.t1 | MTR_4g033435 | 29.911 | 224 | 120 | 7 | 63 | 261 | 266 | 477 | 6.31e-19 | 86.7 |
| MS.gene06287.t1 | MTR_8g076880 | 31.507 | 219 | 129 | 7 | 62 | 261 | 73 | 289 | 6.41e-19 | 86.7 |
| MS.gene06287.t1 | MTR_4g070810 | 31.513 | 238 | 143 | 8 | 43 | 261 | 81 | 317 | 8.28e-19 | 86.3 |
| MS.gene06287.t1 | MTR_8g077700 | 28.846 | 208 | 141 | 6 | 62 | 265 | 67 | 271 | 2.24e-18 | 83.6 |
| MS.gene06287.t1 | MTR_7g070480 | 27.830 | 212 | 138 | 5 | 63 | 261 | 95 | 304 | 7.49e-18 | 83.2 |
| MS.gene06287.t1 | MTR_4g013300 | 28.372 | 215 | 128 | 7 | 66 | 261 | 123 | 330 | 9.87e-18 | 82.8 |
| MS.gene06287.t1 | MTR_5g012460 | 29.515 | 227 | 127 | 5 | 62 | 263 | 109 | 327 | 1.19e-17 | 82.4 |
| MS.gene06287.t1 | MTR_4g105460 | 35.036 | 137 | 86 | 3 | 65 | 200 | 70 | 204 | 7.47e-17 | 77.4 |
| MS.gene06287.t1 | MTR_3g010190 | 29.555 | 247 | 153 | 8 | 36 | 263 | 71 | 315 | 7.64e-17 | 80.5 |
| MS.gene06287.t1 | MTR_8g071000 | 29.779 | 272 | 166 | 12 | 10 | 261 | 35 | 301 | 1.19e-16 | 79.7 |
| MS.gene06287.t1 | MTR_4g033435 | 28.079 | 203 | 123 | 6 | 63 | 247 | 266 | 463 | 8.90e-16 | 77.0 |
| MS.gene06287.t1 | MTR_4g070790 | 28.311 | 219 | 136 | 6 | 62 | 261 | 78 | 294 | 3.67e-14 | 72.0 |
| MS.gene06287.t1 | MTR_7g056587 | 29.744 | 195 | 116 | 6 | 86 | 261 | 1 | 193 | 7.12e-14 | 71.6 |
| MS.gene06287.t1 | MTR_5g062310 | 25.490 | 153 | 110 | 3 | 86 | 237 | 1 | 150 | 1.44e-13 | 69.3 |
| MS.gene06287.t1 | MTR_1g069915 | 28.507 | 221 | 129 | 9 | 61 | 261 | 142 | 353 | 1.92e-13 | 70.1 |
| MS.gene06287.t1 | MTR_3g074050 | 27.027 | 185 | 119 | 7 | 86 | 262 | 1 | 177 | 4.45e-13 | 67.8 |
| MS.gene06287.t1 | MTR_6g015645 | 32.484 | 157 | 90 | 6 | 120 | 261 | 27 | 182 | 4.73e-12 | 65.9 |
| MS.gene06287.t1 | MTR_3g060670 | 25.822 | 213 | 124 | 7 | 68 | 257 | 33 | 234 | 1.34e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06287.t1 | AT1G01630 | 65.368 | 231 | 80 | 0 | 41 | 271 | 25 | 255 | 1.45e-117 | 337 |
| MS.gene06287.t1 | AT1G14820 | 38.333 | 240 | 139 | 4 | 36 | 270 | 1 | 236 | 2.29e-49 | 164 |
| MS.gene06287.t1 | AT1G14820 | 39.815 | 216 | 124 | 3 | 60 | 270 | 9 | 223 | 4.46e-47 | 157 |
| MS.gene06287.t1 | AT1G14820 | 39.815 | 216 | 124 | 3 | 60 | 270 | 9 | 223 | 4.46e-47 | 157 |
| MS.gene06287.t1 | AT4G08690 | 30.531 | 226 | 150 | 5 | 40 | 261 | 16 | 238 | 5.91e-29 | 112 |
| MS.gene06287.t1 | AT4G08690 | 30.531 | 226 | 150 | 5 | 40 | 261 | 16 | 238 | 5.91e-29 | 112 |
| MS.gene06287.t1 | AT4G08690 | 30.531 | 226 | 150 | 5 | 40 | 261 | 16 | 238 | 5.91e-29 | 112 |
| MS.gene06287.t1 | AT1G75170 | 30.864 | 243 | 148 | 8 | 31 | 265 | 14 | 244 | 1.06e-26 | 105 |
| MS.gene06287.t1 | AT1G75170 | 30.864 | 243 | 148 | 8 | 31 | 265 | 14 | 244 | 1.06e-26 | 105 |
| MS.gene06287.t1 | AT1G22180 | 30.531 | 226 | 150 | 6 | 41 | 262 | 20 | 242 | 4.91e-24 | 99.0 |
| MS.gene06287.t1 | AT1G22180 | 30.531 | 226 | 150 | 6 | 41 | 262 | 20 | 242 | 4.91e-24 | 99.0 |
| MS.gene06287.t1 | AT4G36640 | 29.612 | 206 | 138 | 5 | 64 | 265 | 39 | 241 | 1.26e-23 | 97.4 |
| MS.gene06287.t1 | AT4G36640 | 29.612 | 206 | 138 | 5 | 64 | 265 | 39 | 241 | 1.26e-23 | 97.4 |
| MS.gene06287.t1 | AT5G63060 | 33.742 | 163 | 106 | 2 | 65 | 226 | 36 | 197 | 6.31e-23 | 94.4 |
| MS.gene06287.t1 | AT5G63060 | 33.742 | 163 | 106 | 2 | 65 | 226 | 71 | 232 | 1.06e-22 | 94.4 |
| MS.gene06287.t1 | AT4G34580 | 33.180 | 217 | 125 | 8 | 64 | 261 | 83 | 298 | 7.25e-22 | 95.1 |
| MS.gene06287.t1 | AT4G34580 | 33.180 | 217 | 125 | 8 | 64 | 261 | 83 | 298 | 7.25e-22 | 95.1 |
| MS.gene06287.t1 | AT4G39180 | 31.696 | 224 | 134 | 7 | 61 | 266 | 89 | 311 | 5.61e-21 | 92.4 |
| MS.gene06287.t1 | AT4G39180 | 31.696 | 224 | 134 | 7 | 61 | 266 | 89 | 311 | 5.82e-21 | 92.4 |
| MS.gene06287.t1 | AT4G39180 | 31.696 | 224 | 134 | 7 | 61 | 266 | 89 | 311 | 5.82e-21 | 92.4 |
| MS.gene06287.t1 | AT4G36490 | 31.050 | 219 | 130 | 7 | 62 | 261 | 72 | 288 | 1.36e-20 | 91.3 |
| MS.gene06287.t1 | AT1G30690 | 30.769 | 208 | 133 | 6 | 63 | 261 | 217 | 422 | 2.03e-20 | 90.9 |
| MS.gene06287.t1 | AT1G30690 | 30.769 | 208 | 133 | 6 | 63 | 261 | 217 | 422 | 2.03e-20 | 90.9 |
| MS.gene06287.t1 | AT2G16380 | 34.259 | 216 | 122 | 8 | 65 | 261 | 84 | 298 | 2.95e-20 | 90.5 |
| MS.gene06287.t1 | AT2G16380 | 34.259 | 216 | 122 | 8 | 65 | 261 | 84 | 298 | 2.95e-20 | 90.5 |
| MS.gene06287.t1 | AT4G09160 | 27.626 | 257 | 157 | 8 | 31 | 261 | 268 | 521 | 4.62e-20 | 90.1 |
| MS.gene06287.t1 | AT2G18180 | 31.222 | 221 | 131 | 7 | 62 | 263 | 75 | 293 | 4.63e-20 | 89.7 |
| MS.gene06287.t1 | AT4G09160 | 27.626 | 257 | 157 | 8 | 31 | 261 | 268 | 521 | 4.67e-20 | 90.1 |
| MS.gene06287.t1 | AT4G39170 | 31.250 | 272 | 165 | 9 | 10 | 261 | 49 | 318 | 5.10e-20 | 89.7 |
| MS.gene06287.t1 | AT4G09160 | 27.626 | 257 | 157 | 8 | 31 | 261 | 293 | 546 | 5.26e-20 | 89.7 |
| MS.gene06287.t1 | AT4G39170 | 31.250 | 272 | 165 | 9 | 10 | 261 | 49 | 318 | 5.78e-20 | 89.7 |
| MS.gene06287.t1 | AT2G18180 | 31.222 | 221 | 131 | 7 | 62 | 263 | 75 | 293 | 5.87e-20 | 89.7 |
| MS.gene06287.t1 | AT2G21540 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.14e-19 | 88.6 |
| MS.gene06287.t1 | AT2G21540 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.14e-19 | 88.6 |
| MS.gene06287.t1 | AT2G21520 | 32.870 | 216 | 124 | 7 | 65 | 261 | 111 | 324 | 1.15e-19 | 89.0 |
| MS.gene06287.t1 | AT2G21520 | 32.870 | 216 | 124 | 7 | 65 | 261 | 111 | 324 | 1.15e-19 | 89.0 |
| MS.gene06287.t1 | AT2G21540 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.25e-19 | 88.6 |
| MS.gene06287.t1 | AT2G21540 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.25e-19 | 88.6 |
| MS.gene06287.t1 | AT2G21540 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.25e-19 | 88.6 |
| MS.gene06287.t1 | AT2G21540 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.25e-19 | 88.6 |
| MS.gene06287.t1 | AT2G21520 | 32.870 | 216 | 124 | 7 | 65 | 261 | 107 | 320 | 1.28e-19 | 88.6 |
| MS.gene06287.t1 | AT2G18180 | 31.132 | 212 | 125 | 7 | 71 | 263 | 13 | 222 | 2.81e-19 | 87.4 |
| MS.gene06287.t1 | AT2G18180 | 31.132 | 212 | 125 | 7 | 71 | 263 | 13 | 222 | 3.70e-19 | 87.0 |
| MS.gene06287.t1 | AT1G05370 | 30.899 | 178 | 122 | 1 | 62 | 239 | 38 | 214 | 8.24e-19 | 85.9 |
| MS.gene06287.t1 | AT1G19650 | 31.513 | 238 | 143 | 7 | 43 | 261 | 78 | 314 | 8.78e-19 | 86.3 |
| MS.gene06287.t1 | AT1G19650 | 31.933 | 238 | 142 | 7 | 43 | 261 | 78 | 314 | 9.96e-19 | 85.5 |
| MS.gene06287.t1 | AT1G19650 | 30.932 | 236 | 142 | 7 | 44 | 261 | 10 | 242 | 1.39e-18 | 85.5 |
| MS.gene06287.t1 | AT1G75370 | 32.218 | 239 | 140 | 8 | 43 | 261 | 87 | 323 | 4.20e-18 | 84.3 |
| MS.gene06287.t1 | AT1G75370 | 32.218 | 239 | 140 | 8 | 43 | 261 | 87 | 323 | 6.42e-18 | 83.6 |
| MS.gene06287.t1 | AT5G47510 | 30.455 | 220 | 134 | 6 | 62 | 263 | 45 | 263 | 4.19e-17 | 80.5 |
| MS.gene06287.t1 | AT5G47510 | 30.455 | 220 | 134 | 6 | 62 | 263 | 44 | 262 | 4.49e-17 | 80.5 |
| MS.gene06287.t1 | AT5G47510 | 30.455 | 220 | 134 | 6 | 62 | 263 | 45 | 263 | 5.03e-17 | 80.1 |
| MS.gene06287.t1 | AT1G55690 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 5.87e-17 | 80.9 |
| MS.gene06287.t1 | AT1G55690 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 7.24e-17 | 80.5 |
| MS.gene06287.t1 | AT1G55690 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 7.24e-17 | 80.5 |
| MS.gene06287.t1 | AT1G55690 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 7.24e-17 | 80.5 |
| MS.gene06287.t1 | AT1G55690 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 7.24e-17 | 80.5 |
| MS.gene06287.t1 | AT1G22180 | 28.333 | 180 | 123 | 5 | 86 | 262 | 1 | 177 | 1.64e-16 | 77.4 |
| MS.gene06287.t1 | AT1G22180 | 28.333 | 180 | 123 | 5 | 86 | 262 | 1 | 177 | 1.64e-16 | 77.4 |
| MS.gene06287.t1 | AT1G75170 | 33.117 | 154 | 91 | 5 | 116 | 262 | 10 | 158 | 3.54e-16 | 75.9 |
| MS.gene06287.t1 | AT3G24840 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.23e-16 | 78.2 |
| MS.gene06287.t1 | AT3G24840 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.23e-16 | 78.2 |
| MS.gene06287.t1 | AT3G24840 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.23e-16 | 78.2 |
| MS.gene06287.t1 | AT3G24840 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.31e-16 | 78.2 |
| MS.gene06287.t1 | AT3G24840 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.31e-16 | 78.2 |
| MS.gene06287.t1 | AT3G24840 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.31e-16 | 78.2 |
| MS.gene06287.t1 | AT3G24840 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.31e-16 | 78.2 |
| MS.gene06287.t1 | AT1G72160 | 28.571 | 210 | 134 | 7 | 66 | 261 | 164 | 371 | 5.06e-16 | 77.8 |
| MS.gene06287.t1 | AT4G36640 | 27.174 | 184 | 127 | 5 | 86 | 265 | 1 | 181 | 6.41e-16 | 75.5 |
| MS.gene06287.t1 | AT3G22410 | 29.412 | 170 | 116 | 4 | 68 | 235 | 33 | 200 | 1.01e-15 | 76.6 |
| MS.gene06287.t1 | AT3G51670 | 27.273 | 209 | 137 | 5 | 66 | 261 | 82 | 288 | 1.24e-15 | 76.6 |
| MS.gene06287.t1 | AT2G18180 | 29.949 | 197 | 117 | 7 | 86 | 263 | 1 | 195 | 7.14e-14 | 71.6 |
| MS.gene06287.t1 | AT2G16380 | 31.443 | 194 | 114 | 7 | 86 | 261 | 1 | 193 | 2.57e-13 | 69.7 |
| MS.gene06287.t1 | AT1G55840 | 26.556 | 241 | 132 | 9 | 50 | 257 | 12 | 240 | 3.16e-12 | 66.2 |
| MS.gene06287.t1 | AT5G47730 | 27.586 | 203 | 128 | 7 | 71 | 257 | 41 | 240 | 4.46e-12 | 65.9 |
| MS.gene06287.t1 | AT5G47730 | 27.586 | 203 | 128 | 7 | 71 | 257 | 41 | 240 | 4.46e-12 | 65.9 |
| MS.gene06287.t1 | AT1G55840 | 27.143 | 210 | 120 | 7 | 71 | 257 | 14 | 213 | 5.65e-12 | 65.1 |
| MS.gene06287.t1 | AT1G72150 | 26.484 | 219 | 132 | 10 | 63 | 261 | 253 | 462 | 2.03e-11 | 64.3 |
Find 57 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATCTATTGCAGACATTA+AGG | 0.206776 | 3.1:+78089612 | MS.gene06287:CDS |
| AGTTCTCATGAGGCTGATTT+TGG | 0.214151 | 3.1:-78087800 | None:intergenic |
| GCAGCAAAAGCAACAGTTAT+AGG | 0.238428 | 3.1:-78088441 | None:intergenic |
| CTTACATGTTTATGAAAGTA+TGG | 0.278705 | 3.1:+78089740 | MS.gene06287:CDS |
| TTCTCCATTTCATGTACTTT+AGG | 0.284773 | 3.1:-78088320 | None:intergenic |
| GAATCCAATGCTGAATTTCC+AGG | 0.307712 | 3.1:-78087688 | None:intergenic |
| GAATCTTGTATTGGAACTAA+TGG | 0.319714 | 3.1:-78089999 | None:intergenic |
| ATTGGATTCAAAACATGAAT+TGG | 0.341875 | 3.1:+78087702 | MS.gene06287:CDS |
| AAGCCGCGACCCTTCTTCTA+AGG | 0.343766 | 3.1:+78087831 | MS.gene06287:CDS |
| AGTCAGCTCCCAGAGATATA+TGG | 0.360943 | 3.1:+78089966 | MS.gene06287:CDS |
| ATTAATCAAGAATCTTGTAT+TGG | 0.399694 | 3.1:-78090008 | None:intergenic |
| CATACTTTCATAAACATGTA+AGG | 0.403022 | 3.1:-78089739 | None:intergenic |
| AAAATTCTTGTTCAAGATGA+TGG | 0.403189 | 3.1:+78087745 | MS.gene06287:CDS |
| TGTTCCTAAAGTACATGAAA+TGG | 0.412855 | 3.1:+78088316 | MS.gene06287:CDS |
| AACAACTTTCCCAGTCTCTC+TGG | 0.415107 | 3.1:-78089703 | None:intergenic |
| GTATCTATTGCAGACATTAA+GGG | 0.415933 | 3.1:+78089613 | MS.gene06287:CDS |
| AGTTTGCCTCCATATATCTC+TGG | 0.418208 | 3.1:-78089975 | None:intergenic |
| AATGCTGAATTTCCAGGCTC+AGG | 0.419917 | 3.1:-78087682 | None:intergenic |
| TCAAGATGATGGAGCTTTGA+AGG | 0.435484 | 3.1:+78087756 | MS.gene06287:CDS |
| CAAGAAAAGATGTATGTTCA+AGG | 0.455113 | 3.1:+78088399 | MS.gene06287:CDS |
| TATTGCAGACATTAAGGGCT+GGG | 0.457362 | 3.1:+78089618 | MS.gene06287:CDS |
| AGATTACTATCCAGAGAGAC+TGG | 0.459793 | 3.1:+78089693 | MS.gene06287:CDS |
| TTGTTTGTTACCTTAGAAGA+AGG | 0.464246 | 3.1:-78087841 | None:intergenic |
| GAAACAGTGAGCCCTGAGCC+TGG | 0.469224 | 3.1:+78087670 | MS.gene06287:CDS |
| TGGTATTGTCATCAATGAAA+GGG | 0.492868 | 3.1:-78089774 | None:intergenic |
| TTGGTATTGTCATCAATGAA+AGG | 0.500676 | 3.1:-78089775 | None:intergenic |
| CTATTGCAGACATTAAGGGC+TGG | 0.521375 | 3.1:+78089617 | MS.gene06287:CDS |
| TCGTGATTTAGATGTAGATA+AGG | 0.528241 | 3.1:+78088284 | MS.gene06287:CDS |
| TGTTCAAGGAGTGGATAAGA+AGG | 0.530265 | 3.1:+78088413 | MS.gene06287:CDS |
| TGGATAGTAATCTTGTAGAA+TGG | 0.535897 | 3.1:-78089683 | None:intergenic |
| ATGCTGAATTTCCAGGCTCA+GGG | 0.541275 | 3.1:-78087681 | None:intergenic |
| TAATGTGACAGGATGCCACC+AGG | 0.550381 | 3.1:+78089577 | MS.gene06287:intron |
| TGTTTGTTACCTTAGAAGAA+GGG | 0.551270 | 3.1:-78087840 | None:intergenic |
| TGATGACAATACCAAGAAGA+AGG | 0.551378 | 3.1:+78089783 | MS.gene06287:CDS |
| TATGCAAACAGCGACATTCG+CGG | 0.552322 | 3.1:+78089643 | MS.gene06287:CDS |
| AGATCGTCAGGTATCTCTGA+AGG | 0.558116 | 3.1:-78088372 | None:intergenic |
| AGCGACATTCGCGGTTACCT+CGG | 0.560343 | 3.1:+78089652 | MS.gene06287:CDS |
| TGAGCCTGGAAATTCAGCAT+TGG | 0.570238 | 3.1:+78087684 | MS.gene06287:CDS |
| GTTTGCCTCCATATATCTCT+GGG | 0.573143 | 3.1:-78089974 | None:intergenic |
| AGAAAATCATTTGTTCCAAG+TGG | 0.582982 | 3.1:+78088339 | MS.gene06287:CDS |
| AAAGATGTATGTTCAAGGAG+TGG | 0.599654 | 3.1:+78088404 | MS.gene06287:CDS |
| TTACCTTAGAAGAAGGGTCG+CGG | 0.603865 | 3.1:-78087834 | None:intergenic |
| ATTGCAGACATTAAGGGCTG+GGG | 0.606164 | 3.1:+78089619 | MS.gene06287:CDS |
| GATCGTCAGGTATCTCTGAA+GGG | 0.611116 | 3.1:-78088371 | None:intergenic |
| TCATAAACATGTAAGGTGCA+TGG | 0.614836 | 3.1:-78089732 | None:intergenic |
| ATCGTCAGGTATCTCTGAAG+GGG | 0.622595 | 3.1:-78088370 | None:intergenic |
| GAAGGGGATACAGAACCACT+TGG | 0.629494 | 3.1:-78088354 | None:intergenic |
| TTTCAACAAGAGTTCTCATG+AGG | 0.631501 | 3.1:-78087810 | None:intergenic |
| AATGTGACAGGATGCCACCA+GGG | 0.634560 | 3.1:+78089578 | MS.gene06287:intron |
| GATTACTATCCAGAGAGACT+GGG | 0.647177 | 3.1:+78089694 | MS.gene06287:CDS |
| TTGGCTAAAGAAGAAACCAA+GGG | 0.653928 | 3.1:+78087721 | MS.gene06287:CDS |
| GTTCAAGGAGTGGATAAGAA+GGG | 0.656937 | 3.1:+78088414 | MS.gene06287:CDS |
| ATTGGCTAAAGAAGAAACCA+AGG | 0.661306 | 3.1:+78087720 | MS.gene06287:CDS |
| CAGCTCCCAGAGATATATGG+AGG | 0.670836 | 3.1:+78089969 | MS.gene06287:CDS |
| ATGTGACAGGATGCCACCAG+GGG | 0.685775 | 3.1:+78089579 | MS.gene06287:intron |
| TGGCTAAAGAAGAAACCAAG+GGG | 0.720399 | 3.1:+78087722 | MS.gene06287:CDS |
| GTAGAATGGTTAGAGCACCG+AGG | 0.822792 | 3.1:-78089669 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATACAAAATTTATGA+TGG | + | chr3.1:78088135-78088154 | MS.gene06287:intron | 10.0% |
| !!! | GTTATTTTTTTAATTCTAAA+AGG | + | chr3.1:78088962-78088981 | MS.gene06287:intron | 10.0% |
| !!! | TTCTTTATAAAATTTGTTTT+AGG | + | chr3.1:78088986-78089005 | MS.gene06287:intron | 10.0% |
| !!! | AAACATTTTCAAAACAAAAA+TGG | + | chr3.1:78088465-78088484 | MS.gene06287:CDS | 15.0% |
| !!! | AAATTTATCTTTTTTTACAC+AGG | - | chr3.1:78089190-78089209 | None:intergenic | 15.0% |
| !!! | ATAAATATTTTTTGTGTTAC+AGG | + | chr3.1:78089395-78089414 | MS.gene06287:intron | 15.0% |
| !!! | TAAATATTTTTTGTGTTACA+GGG | + | chr3.1:78089396-78089415 | MS.gene06287:intron | 15.0% |
| !!! | TTCTAAAAAAGTCAAATTTT+GGG | - | chr3.1:78088068-78088087 | None:intergenic | 15.0% |
| !!! | TTTCTAAAAAAGTCAAATTT+TGG | - | chr3.1:78088069-78088088 | None:intergenic | 15.0% |
| !!! | TTTTTTCGAACTAAATTTTT+TGG | + | chr3.1:78088105-78088124 | MS.gene06287:intron | 15.0% |
| !! | ATGCATATACAGTTTATATT+TGG | + | chr3.1:78089507-78089526 | MS.gene06287:intron | 20.0% |
| !! | CTTATGTCTAAATTAACAAA+AGG | - | chr3.1:78089339-78089358 | None:intergenic | 20.0% |
| !!! | AACTAAATTGACTTATTTTG+AGG | - | chr3.1:78088799-78088818 | None:intergenic | 20.0% |
| !!! | TTTTCAAAACAAAAATGGTT+TGG | + | chr3.1:78088470-78088489 | MS.gene06287:CDS | 20.0% |
| !!! | TTTTGATAAAACAGTGATAA+CGG | + | chr3.1:78087905-78087924 | MS.gene06287:intron | 20.0% |
| ! | AAAATTCTTGTTCAAGATGA+TGG | + | chr3.1:78087745-78087764 | MS.gene06287:CDS | 25.0% |
| ! | AACTTTACAATTCTTCTTAC+TGG | - | chr3.1:78089543-78089562 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | chr3.1:78089127-78089146 | None:intergenic | 25.0% |
| ! | ATAGAACAAAACAAACATCA+TGG | - | chr3.1:78088161-78088180 | None:intergenic | 25.0% |
| ! | ATTGGATTCAAAACATGAAT+TGG | + | chr3.1:78087702-78087721 | MS.gene06287:CDS | 25.0% |
| ! | CATACTTTCATAAACATGTA+AGG | - | chr3.1:78089742-78089761 | None:intergenic | 25.0% |
| ! | CTAATATGTGAAGTTATGTT+TGG | + | chr3.1:78088574-78088593 | MS.gene06287:intron | 25.0% |
| ! | CTTACATGTTTATGAAAGTA+TGG | + | chr3.1:78089740-78089759 | MS.gene06287:CDS | 25.0% |
| ! | TCCATAAATTCTCCAAAATA+GGG | + | chr3.1:78088694-78088713 | MS.gene06287:intron | 25.0% |
| ! | TGCATGAATTAATTAATGAG+TGG | - | chr3.1:78089469-78089488 | None:intergenic | 25.0% |
| ! | TTCCATAAATTCTCCAAAAT+AGG | + | chr3.1:78088693-78088712 | MS.gene06287:intron | 25.0% |
| ! | TTTGAAAATTGAGATGTTCT+AGG | + | chr3.1:78089856-78089875 | MS.gene06287:intron | 25.0% |
| !! | TAAAAGTTTTACCTTCTTCT+TGG | - | chr3.1:78089797-78089816 | None:intergenic | 25.0% |
| !! | TATGTTGTTTATCCAAACAA+TGG | + | chr3.1:78089365-78089384 | MS.gene06287:intron | 25.0% |
| !!! | AAAATTTGTTTTAGGCATCT+TGG | + | chr3.1:78088994-78089013 | MS.gene06287:intron | 25.0% |
| !!! | ATTAATTTGTTTATCCCAAC+AGG | + | chr3.1:78089282-78089301 | MS.gene06287:intron | 25.0% |
| !!! | ATTAGTTTGTTAACCATAAG+AGG | - | chr3.1:78088559-78088578 | None:intergenic | 25.0% |
| AAACTCATGTGAGACTATTT+GGG | + | chr3.1:78089072-78089091 | MS.gene06287:intron | 30.0% | |
| AAATAAGTCAATCCAAACAC+TGG | - | chr3.1:78089034-78089053 | None:intergenic | 30.0% | |
| AATAAGTCAATCCAAACACT+GGG | - | chr3.1:78089033-78089052 | None:intergenic | 30.0% | |
| AGAAAATCATTTGTTCCAAG+TGG | + | chr3.1:78088339-78088358 | MS.gene06287:CDS | 30.0% | |
| AGACCAAAAGGATATATATG+AGG | - | chr3.1:78088885-78088904 | None:intergenic | 30.0% | |
| AGTGAAAAACAGATCCAAAT+CGG | - | chr3.1:78088027-78088046 | None:intergenic | 30.0% | |
| CAAGAAAAGATGTATGTTCA+AGG | + | chr3.1:78088399-78088418 | MS.gene06287:CDS | 30.0% | |
| GAATCTTGTATTGGAACTAA+TGG | - | chr3.1:78090002-78090021 | None:intergenic | 30.0% | |
| GATTTGAACTTAAGACCAAA+AGG | - | chr3.1:78088897-78088916 | None:intergenic | 30.0% | |
| GTATCTATTGCAGACATTAA+GGG | + | chr3.1:78089613-78089632 | MS.gene06287:CDS | 30.0% | |
| GTTGTAGTTGCAAAAAAAAG+TGG | - | chr3.1:78087941-78087960 | None:intergenic | 30.0% | |
| TAAACTCATGTGAGACTATT+TGG | + | chr3.1:78089071-78089090 | MS.gene06287:intron | 30.0% | |
| TAGGTAGCAAATAGTTAGAT+TGG | + | chr3.1:78088199-78088218 | MS.gene06287:intron | 30.0% | |
| TCGTGATTTAGATGTAGATA+AGG | + | chr3.1:78088284-78088303 | MS.gene06287:CDS | 30.0% | |
| TGGATAGTAATCTTGTAGAA+TGG | - | chr3.1:78089686-78089705 | None:intergenic | 30.0% | |
| TGGTATTGTCATCAATGAAA+GGG | - | chr3.1:78089777-78089796 | None:intergenic | 30.0% | |
| TGTATCTATTGCAGACATTA+AGG | + | chr3.1:78089612-78089631 | MS.gene06287:CDS | 30.0% | |
| TGTTCCTAAAGTACATGAAA+TGG | + | chr3.1:78088316-78088335 | MS.gene06287:CDS | 30.0% | |
| TTCTCCATTTCATGTACTTT+AGG | - | chr3.1:78088323-78088342 | None:intergenic | 30.0% | |
| TTGGTATTGTCATCAATGAA+AGG | - | chr3.1:78089778-78089797 | None:intergenic | 30.0% | |
| ! | AGACCTCATATATATCCTTT+TGG | + | chr3.1:78088879-78088898 | MS.gene06287:intron | 30.0% |
| ! | GTTTTCATAAACTACCTGTT+GGG | - | chr3.1:78089299-78089318 | None:intergenic | 30.0% |
| ! | TGTTTGTTACCTTAGAAGAA+GGG | - | chr3.1:78087843-78087862 | None:intergenic | 30.0% |
| ! | TGTTTTCATAAACTACCTGT+TGG | - | chr3.1:78089300-78089319 | None:intergenic | 30.0% |
| ! | TTGTTTGTTACCTTAGAAGA+AGG | - | chr3.1:78087844-78087863 | None:intergenic | 30.0% |
| !! | ACCCTATTTTGGAGAATTTA+TGG | - | chr3.1:78088698-78088717 | None:intergenic | 30.0% |
| !! | ATTACTATGTTGTACCGATT+TGG | + | chr3.1:78088010-78088029 | MS.gene06287:intron | 30.0% |
| !! | GTTCTATTACAGTACTGATT+AGG | + | chr3.1:78088174-78088193 | MS.gene06287:intron | 30.0% |
| !! | TTGGTCTTAAGTTCAAATCT+TGG | + | chr3.1:78088898-78088917 | MS.gene06287:intron | 30.0% |
| AAAGATGTATGTTCAAGGAG+TGG | + | chr3.1:78088404-78088423 | MS.gene06287:CDS | 35.0% | |
| ACAACTAATAGCATCTCAAG+TGG | - | chr3.1:78088522-78088541 | None:intergenic | 35.0% | |
| AGACTATTTGGGAGAGTTTA+AGG | + | chr3.1:78089083-78089102 | MS.gene06287:intron | 35.0% | |
| AGGTTTAAACTTCGGGATTT+AGG | + | chr3.1:78088760-78088779 | MS.gene06287:intron | 35.0% | |
| ATGTAGTTGTGAGATCGTTT+AGG | + | chr3.1:78088619-78088638 | MS.gene06287:intron | 35.0% | |
| ATTGGCTAAAGAAGAAACCA+AGG | + | chr3.1:78087720-78087739 | MS.gene06287:CDS | 35.0% | |
| CAACTAATAGCATCTCAAGT+GGG | - | chr3.1:78088521-78088540 | None:intergenic | 35.0% | |
| CAATGCTTGAAATCCTCTTA+TGG | + | chr3.1:78088543-78088562 | MS.gene06287:intron | 35.0% | |
| GGAATTGAATTGAGCTTGAT+GGG | + | chr3.1:78088220-78088239 | MS.gene06287:intron | 35.0% | |
| GGTTTAAACTTCGGGATTTA+GGG | + | chr3.1:78088761-78088780 | MS.gene06287:intron | 35.0% | |
| TCATAAACATGTAAGGTGCA+TGG | - | chr3.1:78089735-78089754 | None:intergenic | 35.0% | |
| TGATGACAATACCAAGAAGA+AGG | + | chr3.1:78089783-78089802 | MS.gene06287:CDS | 35.0% | |
| TGGAATTGAATTGAGCTTGA+TGG | + | chr3.1:78088219-78088238 | MS.gene06287:intron | 35.0% | |
| TTGGCTAAAGAAGAAACCAA+GGG | + | chr3.1:78087721-78087740 | MS.gene06287:CDS | 35.0% | |
| TTTATCGTTGAGCCATTGTT+TGG | - | chr3.1:78089380-78089399 | None:intergenic | 35.0% | |
| TTTCAACAAGAGTTCTCATG+AGG | - | chr3.1:78087813-78087832 | None:intergenic | 35.0% | |
| ! | CTAATCTTGAACAAAGTGCT+AGG | - | chr3.1:78087975-78087994 | None:intergenic | 35.0% |
| ! | TTGAACAAGAATTTTCCCCT+TGG | - | chr3.1:78087740-78087759 | None:intergenic | 35.0% |
| !! | TTACAGTACTGATTAGGCTT+AGG | + | chr3.1:78088180-78088199 | MS.gene06287:intron | 35.0% |
| AAAATAGGGTCTGTTTGGAC+AGG | + | chr3.1:78088708-78088727 | MS.gene06287:intron | 40.0% | |
| AAATAGGGTCTGTTTGGACA+GGG | + | chr3.1:78088709-78088728 | MS.gene06287:intron | 40.0% | |
| AAGTTTAAACCTTGCTTGGG+TGG | - | chr3.1:78088752-78088771 | None:intergenic | 40.0% | |
| AGATTACTATCCAGAGAGAC+TGG | + | chr3.1:78089693-78089712 | MS.gene06287:CDS | 40.0% | |
| AGCTTACCCAATAATGTGAC+AGG | + | chr3.1:78089566-78089585 | MS.gene06287:intron | 40.0% | |
| AGTTTGCCTCCATATATCTC+TGG | - | chr3.1:78089978-78089997 | None:intergenic | 40.0% | |
| CCAAGCAAGGTTTAAACTTC+GGG | + | chr3.1:78088753-78088772 | MS.gene06287:intron | 40.0% | |
| CCCAAGCAAGGTTTAAACTT+CGG | + | chr3.1:78088752-78088771 | MS.gene06287:intron | 40.0% | |
| CCGAAGTTTAAACCTTGCTT+GGG | - | chr3.1:78088755-78088774 | None:intergenic | 40.0% | |
| GAATCCAATGCTGAATTTCC+AGG | - | chr3.1:78087691-78087710 | None:intergenic | 40.0% | |
| GATTACTATCCAGAGAGACT+GGG | + | chr3.1:78089694-78089713 | MS.gene06287:CDS | 40.0% | |
| GCAGCAAAAGCAACAGTTAT+AGG | - | chr3.1:78088444-78088463 | None:intergenic | 40.0% | |
| GTTCAAGGAGTGGATAAGAA+GGG | + | chr3.1:78088414-78088433 | MS.gene06287:CDS | 40.0% | |
| GTTTGCCTCCATATATCTCT+GGG | - | chr3.1:78089977-78089996 | None:intergenic | 40.0% | |
| TATTGCAGACATTAAGGGCT+GGG | + | chr3.1:78089618-78089637 | MS.gene06287:CDS | 40.0% | |
| TCTCCAAAATAGGGTCTGTT+TGG | + | chr3.1:78088703-78088722 | MS.gene06287:intron | 40.0% | |
| TGGCATCCTGTCACATTATT+GGG | - | chr3.1:78089575-78089594 | None:intergenic | 40.0% | |
| TGGCTAAAGAAGAAACCAAG+GGG | + | chr3.1:78087722-78087741 | MS.gene06287:CDS | 40.0% | |
| TGTTCAAGGAGTGGATAAGA+AGG | + | chr3.1:78088413-78088432 | MS.gene06287:CDS | 40.0% | |
| ! | GATACAAACTTTTCTTCCCC+TGG | - | chr3.1:78089598-78089617 | None:intergenic | 40.0% |
| ! | TGTCCAAACAGACCCTATTT+TGG | - | chr3.1:78088709-78088728 | None:intergenic | 40.0% |
| ! | TTTTCTTGTGCAAGATCGTC+AGG | - | chr3.1:78088387-78088406 | None:intergenic | 40.0% |
| !! | AGTTCTCATGAGGCTGATTT+TGG | - | chr3.1:78087803-78087822 | None:intergenic | 40.0% |
| !! | TCAAGATGATGGAGCTTTGA+AGG | + | chr3.1:78087756-78087775 | MS.gene06287:CDS | 40.0% |
| AACAACTTTCCCAGTCTCTC+TGG | - | chr3.1:78089706-78089725 | None:intergenic | 45.0% | |
| AATGCTGAATTTCCAGGCTC+AGG | - | chr3.1:78087685-78087704 | None:intergenic | 45.0% | |
| AGATCGTCAGGTATCTCTGA+AGG | - | chr3.1:78088375-78088394 | None:intergenic | 45.0% | |
| AGTCAATCCAAACACTGGGT+CGG | - | chr3.1:78089029-78089048 | None:intergenic | 45.0% | |
| AGTCAGCTCCCAGAGATATA+TGG | + | chr3.1:78089966-78089985 | MS.gene06287:CDS | 45.0% | |
| ATGCTGAATTTCCAGGCTCA+GGG | - | chr3.1:78087684-78087703 | None:intergenic | 45.0% | |
| ATTGCAGACATTAAGGGCTG+GGG | + | chr3.1:78089619-78089638 | MS.gene06287:CDS | 45.0% | |
| CCCGAAGTTTAAACCTTGCT+TGG | - | chr3.1:78088756-78088775 | None:intergenic | 45.0% | |
| CTATTGCAGACATTAAGGGC+TGG | + | chr3.1:78089617-78089636 | MS.gene06287:CDS | 45.0% | |
| GATCGTCAGGTATCTCTGAA+GGG | - | chr3.1:78088374-78088393 | None:intergenic | 45.0% | |
| GTGGCATCCTGTCACATTAT+TGG | - | chr3.1:78089576-78089595 | None:intergenic | 45.0% | |
| TATGCAAACAGCGACATTCG+CGG | + | chr3.1:78089643-78089662 | MS.gene06287:CDS | 45.0% | |
| TGAGCCTGGAAATTCAGCAT+TGG | + | chr3.1:78087684-78087703 | MS.gene06287:CDS | 45.0% | |
| TTACCTTAGAAGAAGGGTCG+CGG | - | chr3.1:78087837-78087856 | None:intergenic | 45.0% | |
| TTTAGGCATCTTGGCGTGTT+GGG | + | chr3.1:78089003-78089022 | MS.gene06287:intron | 45.0% | |
| ! | ACAAACTTTTCTTCCCCTGG+TGG | - | chr3.1:78089595-78089614 | None:intergenic | 45.0% |
| ! | ATCGTCAGGTATCTCTGAAG+GGG | - | chr3.1:78088373-78088392 | None:intergenic | 45.0% |
| ! | TTGAATTGAGCTTGATGGGC+AGG | + | chr3.1:78088224-78088243 | MS.gene06287:intron | 45.0% |
| ! | TTTTAGGCATCTTGGCGTGT+TGG | + | chr3.1:78089002-78089021 | MS.gene06287:intron | 45.0% |
| AATGTGACAGGATGCCACCA+GGG | + | chr3.1:78089578-78089597 | MS.gene06287:intron | 50.0% | |
| CAGCTCCCAGAGATATATGG+AGG | + | chr3.1:78089969-78089988 | MS.gene06287:CDS | 50.0% | |
| GAAGGGGATACAGAACCACT+TGG | - | chr3.1:78088357-78088376 | None:intergenic | 50.0% | |
| TAAACCTTGCTTGGGTGGCT+TGG | - | chr3.1:78088747-78088766 | None:intergenic | 50.0% | |
| TAATGTGACAGGATGCCACC+AGG | + | chr3.1:78089577-78089596 | MS.gene06287:intron | 50.0% | |
| ! | AATTGAGCTTGATGGGCAGG+AGG | + | chr3.1:78088227-78088246 | MS.gene06287:intron | 50.0% |
| !! | GTAGAATGGTTAGAGCACCG+AGG | - | chr3.1:78089672-78089691 | None:intergenic | 50.0% |
| AAGCCGCGACCCTTCTTCTA+AGG | + | chr3.1:78087831-78087850 | MS.gene06287:CDS | 55.0% | |
| AGCGACATTCGCGGTTACCT+CGG | + | chr3.1:78089652-78089671 | MS.gene06287:CDS | 55.0% | |
| ATGTGACAGGATGCCACCAG+GGG | + | chr3.1:78089579-78089598 | MS.gene06287:intron | 55.0% | |
| AGGGTCTGTTTGGACAGGGC+CGG | + | chr3.1:78088713-78088732 | MS.gene06287:intron | 60.0% | |
| GAAACAGTGAGCCCTGAGCC+TGG | + | chr3.1:78087670-78087689 | MS.gene06287:CDS | 60.0% | |
| TGTTGGGCCGACCCAGTGTT+TGG | + | chr3.1:78089019-78089038 | MS.gene06287:intron | 60.0% | |
| AGGGCCAAGCCACCCAAGCA+AGG | + | chr3.1:78088740-78088759 | MS.gene06287:intron | 65.0% | |
| TTTGGACAGGGCCGGCCCAA+GGG | + | chr3.1:78088721-78088740 | MS.gene06287:intron | 65.0% | |
| ! | GCTTGGGTGGCTTGGCCCTT+GGG | - | chr3.1:78088739-78088758 | None:intergenic | 65.0% |
| ! | TGCTTGGGTGGCTTGGCCCT+TGG | - | chr3.1:78088740-78088759 | None:intergenic | 65.0% |
| GTTTGGACAGGGCCGGCCCA+AGG | + | chr3.1:78088720-78088739 | MS.gene06287:intron | 70.0% | |
| ! | GGGTGGCTTGGCCCTTGGGC+CGG | - | chr3.1:78088735-78088754 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 78087667 | 78090025 | 78087667 | ID=MS.gene06287 |
| chr3.1 | mRNA | 78087667 | 78090025 | 78087667 | ID=MS.gene06287.t1;Parent=MS.gene06287 |
| chr3.1 | exon | 78087667 | 78087852 | 78087667 | ID=MS.gene06287.t1.exon1;Parent=MS.gene06287.t1 |
| chr3.1 | CDS | 78087667 | 78087852 | 78087667 | ID=cds.MS.gene06287.t1;Parent=MS.gene06287.t1 |
| chr3.1 | exon | 78088246 | 78088504 | 78088246 | ID=MS.gene06287.t1.exon2;Parent=MS.gene06287.t1 |
| chr3.1 | CDS | 78088246 | 78088504 | 78088246 | ID=cds.MS.gene06287.t1;Parent=MS.gene06287.t1 |
| chr3.1 | exon | 78089417 | 78089453 | 78089417 | ID=MS.gene06287.t1.exon3;Parent=MS.gene06287.t1 |
| chr3.1 | CDS | 78089417 | 78089453 | 78089417 | ID=cds.MS.gene06287.t1;Parent=MS.gene06287.t1 |
| chr3.1 | exon | 78089588 | 78089804 | 78089588 | ID=MS.gene06287.t1.exon4;Parent=MS.gene06287.t1 |
| chr3.1 | CDS | 78089588 | 78089804 | 78089588 | ID=cds.MS.gene06287.t1;Parent=MS.gene06287.t1 |
| chr3.1 | exon | 78089909 | 78090025 | 78089909 | ID=MS.gene06287.t1.exon5;Parent=MS.gene06287.t1 |
| chr3.1 | CDS | 78089909 | 78090025 | 78089909 | ID=cds.MS.gene06287.t1;Parent=MS.gene06287.t1 |
| Gene Sequence |
| Protein sequence |
