Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051605.t1 | ACJ84046.1 | 80.3 | 304 | 28 | 2 | 1 | 272 | 1 | 304 | 1.40E-69 | 273.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051605.t1 | Q9SZI6 | 74.5 | 51 | 11 | 1 | 143 | 191 | 186 | 236 | 9.4e-14 | 79.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051605.t1 | B7FH17 | 80.3 | 304 | 28 | 2 | 1 | 272 | 1 | 304 | 1.0e-69 | 273.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051605.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene051605 | 0.801521 | 8.66E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene051605 | 0.823313 | 1.48E-53 | -1.69E-46 |
| MS.gene050812 | MS.gene051605 | 0.806616 | 7.55E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene051605 | 0.839944 | 1.17E-57 | -1.69E-46 |
| MS.gene051605 | MS.gene052188 | 0.837021 | 6.64E-57 | -1.69E-46 |
| MS.gene051605 | MS.gene052310 | 0.845397 | 4.17E-59 | -1.69E-46 |
| MS.gene051605 | MS.gene052340 | 0.818439 | 1.96E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene052414 | 0.814821 | 1.27E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene052421 | 0.820585 | 6.35E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene052485 | 0.80855 | 2.93E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene053557 | 0.819127 | 1.37E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene053912 | 0.815952 | 7.10E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene055116 | 0.841932 | 3.52E-58 | -1.69E-46 |
| MS.gene051605 | MS.gene056511 | 0.812707 | 3.70E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene056659 | 0.813626 | 2.33E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene057749 | 0.809115 | 2.22E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene057823 | 0.802361 | 5.82E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene057825 | 0.822566 | 2.21E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene058007 | 0.813324 | 2.71E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene058376 | 0.811042 | 8.53E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene058444 | 0.804004 | 2.66E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene058660 | 0.806855 | 6.72E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene058700 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene058928 | 0.833755 | 4.44E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene059597 | 0.804626 | 1.97E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene059688 | 0.846153 | 2.60E-59 | -1.69E-46 |
| MS.gene051605 | MS.gene059692 | 0.838916 | 2.16E-57 | -1.69E-46 |
| MS.gene051605 | MS.gene059695 | 0.840239 | 9.80E-58 | -1.69E-46 |
| MS.gene051605 | MS.gene059711 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene059807 | 0.813186 | 2.91E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene061041 | 0.805912 | 1.06E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene061049 | 0.802233 | 6.18E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene061606 | 0.80383 | 2.89E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene061659 | 0.8232 | 1.57E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene062227 | 0.813553 | 2.42E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene06287 | 0.801671 | 8.07E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene063074 | 0.823983 | 1.03E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene064168 | 0.809349 | 1.98E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene064519 | 0.818893 | 1.55E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene064789 | 0.80245 | 5.58E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene064875 | 0.815546 | 8.75E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene06490 | 0.801968 | 7.01E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene066450 | 0.822037 | 2.93E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene067385 | 0.820912 | 5.34E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene067414 | 0.846682 | 1.86E-59 | -1.69E-46 |
| MS.gene051605 | MS.gene067522 | 0.808611 | 2.85E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene068064 | 0.823998 | 1.02E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene069859 | 0.844913 | 5.63E-59 | -1.69E-46 |
| MS.gene051605 | MS.gene069976 | 0.814697 | 1.35E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene070207 | 0.822492 | 2.30E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene070266 | 0.826562 | 2.53E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene070317 | 0.818119 | 2.31E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene070789 | 0.807604 | 4.66E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene070835 | 0.803364 | 3.61E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene070956 | 0.814102 | 1.83E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene071613 | 0.80409 | 2.55E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene072430 | 0.827204 | 1.78E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene072998 | 0.819213 | 1.31E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene073295 | 0.830369 | 3.05E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene07366 | 0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene073925 | 0.826985 | 2.01E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene073926 | 0.813774 | 2.16E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene073963 | 0.805735 | 1.16E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene074268 | 0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene07619 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene07862 | 0.815254 | 1.02E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene08083 | 0.802206 | 6.26E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene09574 | 0.814861 | 1.24E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene09725 | 0.821088 | 4.86E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene09727 | 0.817632 | 2.98E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene09923 | 0.823783 | 1.15E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene09953 | 0.815565 | 8.66E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene20025 | 0.823056 | 1.70E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene20275 | 0.804105 | 2.53E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene20910 | 0.811039 | 8.55E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene20931 | 0.805159 | 1.53E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene21413 | 0.800756 | 1.24E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene21534 | 0.820515 | 6.59E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene21564 | 0.812257 | 4.64E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene22206 | 0.828604 | 8.20E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene22209 | 0.829113 | 6.17E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene22721 | 0.821857 | 3.23E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene22846 | 0.825714 | 4.03E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene22985 | 0.815525 | 8.84E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene23002 | 0.809459 | 1.87E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene23357 | 0.831414 | 1.69E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene24098 | 0.806716 | 7.19E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene24730 | 0.801149 | 1.03E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene25171 | 0.82492 | 6.22E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene25693 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene25859 | 0.820206 | 7.75E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene26111 | 0.807179 | 5.73E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene26649 | 0.807532 | 4.83E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene27100 | 0.814691 | 1.35E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene27498 | 0.807207 | 5.66E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene27514 | 0.825534 | 4.45E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene28113 | 0.810641 | 1.04E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene28163 | 0.806851 | 6.73E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene28314 | 0.830669 | 2.58E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene28441 | 0.800788 | 1.22E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene28656 | 0.806171 | 9.36E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene28694 | 0.812149 | 4.90E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene28984 | 0.802018 | 6.85E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene29173 | 0.817427 | 3.32E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene30306 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene30834 | 0.832177 | 1.10E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene31035 | 0.831898 | 1.29E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene31046 | 0.805698 | 1.18E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene31266 | 0.839326 | 1.69E-57 | -1.69E-46 |
| MS.gene051605 | MS.gene31298 | 0.814667 | 1.37E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene31671 | 0.821547 | 3.81E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene32046 | 0.815376 | 9.54E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene32274 | 0.814217 | 1.72E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene32705 | 0.812961 | 3.26E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene32707 | 0.815747 | 7.89E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene33658 | 0.811783 | 5.89E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene34188 | 0.819276 | 1.26E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene34191 | 0.811411 | 7.10E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene34496 | 0.804466 | 2.13E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene34800 | 0.807011 | 6.23E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene34843 | 0.819576 | 1.08E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene36353 | 0.807247 | 5.55E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene36507 | 0.823767 | 1.16E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene37919 | 0.802181 | 6.34E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene39277 | 0.83622 | 1.06E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene39892 | 0.808835 | 2.55E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene41713 | 0.806283 | 8.87E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene41873 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene42667 | 0.812077 | 5.08E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene43067 | 0.816951 | 4.24E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene43403 | 0.803452 | 3.46E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene43407 | 0.806387 | 8.43E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene43562 | 0.819487 | 1.13E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene43782 | 0.819734 | 9.94E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene43919 | 0.821377 | 4.17E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene44558 | 0.827309 | 1.68E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene44876 | 0.81312 | 3.01E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene46239 | 0.805095 | 1.57E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene46602 | 0.827791 | 1.29E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene46645 | 0.803713 | 3.06E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene46942 | 0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene46956 | 0.834015 | 3.83E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene47389 | 0.815848 | 7.49E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene47396 | 0.816983 | 4.17E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene47398 | 0.80299 | 4.32E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene47869 | 0.815312 | 9.86E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene48151 | 0.804084 | 2.56E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene48509 | 0.813335 | 2.70E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene48593 | 0.809424 | 1.91E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene48662 | 0.831083 | 2.04E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene49048 | 0.813174 | 2.93E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene49050 | 0.809535 | 1.80E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene49935 | 0.820901 | 5.37E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene50226 | 0.804337 | 2.27E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene50731 | 0.813615 | 2.34E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene52101 | 0.802092 | 6.61E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene52324 | 0.821485 | 3.94E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene53332 | 0.824499 | 7.81E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene53556 | 0.801701 | 7.95E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene55153 | 0.804175 | 2.45E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene55270 | 0.816464 | 5.46E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene56043 | 0.803238 | 3.83E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene56089 | 0.814007 | 1.92E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene56177 | 0.823004 | 1.75E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene56216 | 0.80162 | 8.26E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene56713 | 0.808557 | 2.92E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene57547 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene57561 | 0.852647 | 4.02E-61 | -1.69E-46 |
| MS.gene051605 | MS.gene58160 | 0.803721 | 3.05E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene58162 | 0.804103 | 2.54E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene58252 | 0.818575 | 1.82E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene58344 | 0.829867 | 4.05E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene58345 | 0.841422 | 4.80E-58 | -1.69E-46 |
| MS.gene051605 | MS.gene58346 | 0.813827 | 2.10E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene59950 | 0.813398 | 2.61E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene60813 | 0.807203 | 5.67E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene62420 | 0.833704 | 4.58E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene62822 | 0.808861 | 2.52E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene63115 | 0.857519 | 1.54E-62 | -1.69E-46 |
| MS.gene051605 | MS.gene63538 | 0.842442 | 2.58E-58 | -1.69E-46 |
| MS.gene051605 | MS.gene63955 | 0.821871 | 3.21E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene63957 | 0.807661 | 4.53E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene64294 | 0.80886 | 2.52E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene64994 | 0.810946 | 8.95E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene65588 | 0.814375 | 1.59E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene66835 | 0.813531 | 2.44E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene66892 | 0.826502 | 2.62E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene67204 | 0.820283 | 7.44E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene67422 | 0.801113 | 1.05E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene68677 | 0.814665 | 1.37E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene68963 | 0.813101 | 3.03E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene68967 | 0.80106 | 1.08E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene68968 | 0.800848 | 1.19E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene69489 | 0.808999 | 2.35E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene70088 | 0.816596 | 5.10E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene70267 | 0.831729 | 1.41E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene70304 | 0.81177 | 5.93E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene70333 | 0.813415 | 2.59E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene70352 | 0.840283 | 9.55E-58 | -1.69E-46 |
| MS.gene051605 | MS.gene71024 | 0.81418 | 1.76E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene71456 | 0.804629 | 1.97E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene71664 | 0.828903 | 6.94E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene71667 | 0.80196 | 7.04E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene73235 | 0.822009 | 2.98E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene74225 | 0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene75176 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene75297 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene75493 | 0.827649 | 1.39E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene76300 | 0.809746 | 1.62E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene76428 | 0.801864 | 7.36E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene77433 | 0.81773 | 2.83E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene78321 | 0.822971 | 1.78E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene78531 | 0.824366 | 8.39E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene79020 | 0.803441 | 3.48E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene79179 | 0.805547 | 1.27E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene79726 | 0.809856 | 1.54E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene79947 | 0.801877 | 7.32E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene80178 | 0.815475 | 9.07E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene81523 | 0.806886 | 6.62E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene81859 | 0.807971 | 3.89E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene81877 | 0.81688 | 4.40E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene83543 | 0.808488 | 3.02E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene84406 | 0.804983 | 1.66E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene84575 | 0.811393 | 7.16E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene85703 | 0.806416 | 8.31E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene86216 | 0.814723 | 1.33E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene86306 | 0.804203 | 2.42E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene86413 | 0.834961 | 2.21E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene87280 | 0.803117 | 4.06E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene88768 | 0.82036 | 7.15E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene88945 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene88978 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene90538 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene90950 | 0.816291 | 5.96E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene91319 | 0.803407 | 3.54E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene91325 | 0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene91508 | 0.808153 | 3.56E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene91509 | 0.803641 | 3.16E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene92064 | 0.812044 | 5.17E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene92559 | 0.812573 | 3.96E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene92659 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene92714 | 0.814696 | 1.35E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene92761 | 0.813879 | 2.05E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene92773 | 0.824361 | 8.41E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene92871 | 0.817966 | 2.51E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene94035 | 0.80073 | 1.26E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene94333 | 0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene94785 | 0.800781 | 1.23E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene95008 | 0.802698 | 4.96E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene95702 | 0.828879 | 7.03E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene95748 | 0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene95806 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene051605 | MS.gene95884 | 0.80277 | 4.79E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene97081 | 0.848082 | 7.69E-60 | -1.69E-46 |
| MS.gene051605 | MS.gene99854 | 0.81286 | 3.43E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051605.t1 | MTR_1g016170 | 86.230 | 305 | 9 | 3 | 1 | 272 | 1 | 305 | 3.64e-166 | 462 |
| MS.gene051605.t1 | MTR_3g050610 | 73.653 | 167 | 24 | 2 | 1 | 167 | 1 | 147 | 3.13e-66 | 203 |
| MS.gene051605.t1 | MTR_3g050550 | 80.851 | 94 | 18 | 0 | 64 | 157 | 1 | 94 | 2.51e-47 | 153 |
| MS.gene051605.t1 | MTR_4g126350 | 40.164 | 122 | 51 | 3 | 63 | 183 | 115 | 215 | 5.67e-17 | 79.7 |
| MS.gene051605.t1 | MTR_4g121110 | 62.500 | 48 | 18 | 0 | 151 | 198 | 27 | 74 | 7.57e-16 | 73.2 |
| MS.gene051605.t1 | MTR_2g038720 | 35.841 | 226 | 90 | 8 | 65 | 270 | 98 | 288 | 1.71e-15 | 75.1 |
| MS.gene051605.t1 | MTR_7g112330 | 69.444 | 36 | 11 | 0 | 154 | 189 | 22 | 57 | 5.44e-13 | 65.1 |
| MS.gene051605.t1 | MTR_5g020230 | 50.000 | 66 | 27 | 1 | 131 | 190 | 93 | 158 | 3.22e-12 | 65.1 |
| MS.gene051605.t1 | MTR_1g094930 | 53.659 | 41 | 19 | 0 | 149 | 189 | 142 | 182 | 6.51e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051605.t1 | AT5G56860 | 40.458 | 131 | 51 | 6 | 75 | 187 | 142 | 263 | 4.53e-18 | 83.6 |
| MS.gene051605.t1 | AT4G26150 | 45.133 | 113 | 31 | 4 | 75 | 185 | 147 | 230 | 3.66e-17 | 80.5 |
| MS.gene051605.t1 | AT5G49300 | 66.667 | 45 | 15 | 0 | 150 | 194 | 32 | 76 | 4.29e-17 | 76.3 |
| MS.gene051605.t1 | AT5G26930 | 69.048 | 42 | 13 | 0 | 150 | 191 | 22 | 63 | 4.17e-16 | 73.2 |
| MS.gene051605.t1 | AT3G06740 | 66.667 | 42 | 14 | 0 | 151 | 192 | 38 | 79 | 1.57e-14 | 69.7 |
| MS.gene051605.t1 | AT4G16141 | 68.293 | 41 | 13 | 0 | 151 | 191 | 34 | 74 | 2.99e-14 | 70.1 |
| MS.gene051605.t1 | AT3G16870 | 57.143 | 56 | 20 | 1 | 151 | 206 | 39 | 90 | 3.87e-14 | 69.7 |
| MS.gene051605.t1 | AT4G36620 | 61.364 | 44 | 17 | 0 | 154 | 197 | 75 | 118 | 2.54e-12 | 65.1 |
| MS.gene051605.t1 | AT2G18380 | 68.293 | 41 | 12 | 1 | 154 | 193 | 92 | 132 | 3.93e-12 | 64.3 |
| MS.gene051605.t1 | AT5G25830 | 55.556 | 45 | 20 | 0 | 145 | 189 | 210 | 254 | 2.86e-11 | 63.2 |
| MS.gene051605.t1 | AT3G50870 | 62.222 | 45 | 16 | 1 | 154 | 197 | 152 | 196 | 3.87e-11 | 62.8 |
| MS.gene051605.t1 | AT1G08010 | 54.000 | 50 | 22 | 1 | 140 | 189 | 207 | 255 | 8.10e-11 | 61.6 |
| MS.gene051605.t1 | AT1G08010 | 54.000 | 50 | 22 | 1 | 140 | 189 | 207 | 255 | 8.10e-11 | 61.6 |
| MS.gene051605.t1 | AT1G08010 | 54.000 | 50 | 22 | 1 | 140 | 189 | 207 | 255 | 8.10e-11 | 61.6 |
Find 62 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTGTTTGGTCTCATTAT+TGG | 0.200196 | 1.3:-6090483 | None:intergenic |
| TGACCTTGTAGTAAGGAATT+AGG | 0.293931 | 1.3:-6089376 | None:intergenic |
| TGTTACTACTAGGGCTTGTT+TGG | 0.323214 | 1.3:-6090605 | None:intergenic |
| ATGATGAGACCTAGTAATTA+TGG | 0.329839 | 1.3:+6090549 | MS.gene051605:CDS |
| TTGTTACCGCTGTTACTACT+AGG | 0.336848 | 1.3:-6090615 | None:intergenic |
| GTCCAAGAAATCAAAATATA+AGG | 0.340331 | 1.3:+6090577 | MS.gene051605:CDS |
| ACAGCGGTAACAACACCATT+AGG | 0.354036 | 1.3:+6090625 | MS.gene051605:CDS |
| TTTGCAATGCTTGTGGAATC+AGG | 0.357272 | 1.3:+6091246 | MS.gene051605:CDS |
| CAACACCATTAGGGTTTGTT+CGG | 0.364696 | 1.3:+6090635 | MS.gene051605:CDS |
| TCATCATAATCATAATCTAA+TGG | 0.373491 | 1.3:-6091458 | None:intergenic |
| CACTCCTCCAAAGTGGGGTA+TGG | 0.383367 | 1.3:-6090671 | None:intergenic |
| CACAAATTTATCATCATCCT+TGG | 0.395360 | 1.3:+6090350 | MS.gene051605:CDS |
| AGCAACGGCGGCACGACTTC+TGG | 0.401059 | 1.3:+6091484 | MS.gene051605:CDS |
| CCTGGTGGATTCAGAGAAAC+AGG | 0.414838 | 1.3:-6089352 | None:intergenic |
| GTGGCTGTAATACTGTTGTT+TGG | 0.427204 | 1.3:-6090495 | None:intergenic |
| TTCATCAAGTGAGTCAGTTA+TGG | 0.431248 | 1.3:+6090305 | MS.gene051605:CDS |
| CAGCGGTAACAACACCATTA+GGG | 0.438409 | 1.3:+6090626 | MS.gene051605:CDS |
| CTTTGGAGGAGTGGCCCTAT+GGG | 0.439971 | 1.3:+6090681 | MS.gene051605:CDS |
| ACTTTGGAGGAGTGGCCCTA+TGG | 0.441269 | 1.3:+6090680 | MS.gene051605:CDS |
| TTGATGAATTATAGAGTTGT+TGG | 0.441916 | 1.3:-6090290 | None:intergenic |
| ATAGTCACGGGTCTGAGAAA+TGG | 0.445338 | 1.3:+6090397 | MS.gene051605:CDS |
| CTTCTGGTGGATATATCTTC+TGG | 0.451597 | 1.3:+6091500 | MS.gene051605:CDS |
| ACAATCCGAACAAACCCTAA+TGG | 0.454044 | 1.3:-6090640 | None:intergenic |
| CGAAATACCTTTGGACCCAT+AGG | 0.478103 | 1.3:-6090696 | None:intergenic |
| TTTATCATCATCCTTGGAGC+TGG | 0.479939 | 1.3:+6090356 | MS.gene051605:CDS |
| CTTGATAGCTTTGTCAGTAG+TGG | 0.482210 | 1.3:-6090514 | None:intergenic |
| ACTCCTCCAAAGTGGGGTAT+GGG | 0.495268 | 1.3:-6090670 | None:intergenic |
| TTCTTAGTCTTGAATTGTGT+AGG | 0.495944 | 1.3:-6091353 | None:intergenic |
| TAATTACTAGGTCTCATCAT+TGG | 0.503467 | 1.3:-6090546 | None:intergenic |
| GCTGCTATCTTCCAGCTCCA+AGG | 0.513483 | 1.3:-6090367 | None:intergenic |
| TGGTCTCATTATTGGAGTTG+TGG | 0.515285 | 1.3:-6090475 | None:intergenic |
| AAGCTGGCATTTCATCATGA+TGG | 0.517666 | 1.3:+6090249 | MS.gene051605:CDS |
| TCAGGCAGAGAAAGGCAAGA+AGG | 0.520139 | 1.3:+6091264 | MS.gene051605:CDS |
| CAGGCAGAGAAAGGCAAGAA+GGG | 0.521350 | 1.3:+6091265 | MS.gene051605:CDS |
| ACAACTTCAACTACTTCTGC+TGG | 0.524955 | 1.3:+6091398 | MS.gene051605:CDS |
| GCAATGGCTGAAGCTGCAAA+TGG | 0.532959 | 1.3:+6091287 | MS.gene051605:CDS |
| ATTACTTTAGGATCATAAGC+TGG | 0.534318 | 1.3:+6090233 | MS.gene051605:intron |
| CCTGTTTCTCTGAATCCACC+AGG | 0.540643 | 1.3:+6089352 | MS.gene051605:CDS |
| CAGTCACTTTGCAATGCTTG+TGG | 0.543553 | 1.3:+6091239 | MS.gene051605:intron |
| TTGTGGAATCAGGCAGAGAA+AGG | 0.551715 | 1.3:+6091256 | MS.gene051605:CDS |
| GAAATACCTTTGGACCCATA+GGG | 0.553030 | 1.3:-6090695 | None:intergenic |
| GTACATCCCATACCCCACTT+TGG | 0.556830 | 1.3:+6090664 | MS.gene051605:CDS |
| TGTTACCGCTGTTACTACTA+GGG | 0.563428 | 1.3:-6090614 | None:intergenic |
| TAGGGCCACTCCTCCAAAGT+GGG | 0.565226 | 1.3:-6090677 | None:intergenic |
| GGACTAGTACCATAATTACT+AGG | 0.573336 | 1.3:-6090558 | None:intergenic |
| ATTCAGAGAAACAGGAGTCA+TGG | 0.574562 | 1.3:-6089344 | None:intergenic |
| AGAAGTAGTTGAAGTTGTAG+AGG | 0.579757 | 1.3:-6091393 | None:intergenic |
| GAGTGGCCCTATGGGTCCAA+AGG | 0.590272 | 1.3:+6090689 | MS.gene051605:CDS |
| CATCCCATACCCCACTTTGG+AGG | 0.595750 | 1.3:+6090667 | MS.gene051605:CDS |
| GGTCCTAATTCCTTACTACA+AGG | 0.608365 | 1.3:+6089373 | MS.gene051605:CDS |
| AATGGATATCTTCAAAGATG+AGG | 0.610970 | 1.3:+6090415 | MS.gene051605:CDS |
| TGATTATGATGAAGCAGCAA+CGG | 0.614524 | 1.3:+6091469 | MS.gene051605:CDS |
| GAGAAAGGCAAGAAGGGCAA+TGG | 0.614871 | 1.3:+6091271 | MS.gene051605:CDS |
| CATACCCCACTTTGGAGGAG+TGG | 0.615240 | 1.3:+6090672 | MS.gene051605:CDS |
| AACGGCGGCACGACTTCTGG+TGG | 0.640817 | 1.3:+6091487 | MS.gene051605:CDS |
| AGTAAGGAATTAGGACCTGG+TGG | 0.650702 | 1.3:-6089367 | None:intergenic |
| ATAGGGCCACTCCTCCAAAG+TGG | 0.665162 | 1.3:-6090678 | None:intergenic |
| ACAATTCAAGACTAAGAACA+AGG | 0.668290 | 1.3:+6091358 | MS.gene051605:CDS |
| TGTAGTAAGGAATTAGGACC+TGG | 0.677396 | 1.3:-6089370 | None:intergenic |
| AGGGCCACTCCTCCAAAGTG+GGG | 0.692599 | 1.3:-6090676 | None:intergenic |
| TTATGATGAAGCAGCAACGG+CGG | 0.694941 | 1.3:+6091472 | MS.gene051605:CDS |
| ACAAGCCCTAGTAGTAACAG+CGG | 0.724459 | 1.3:+6090609 | MS.gene051605:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAATTAAGTTTAATTA+TGG | - | chr1.3:6091165-6091184 | None:intergenic | 10.0% |
| !! | AATTAAAAAAGATAAAATAG+AGG | - | chr1.3:6090989-6091008 | None:intergenic | 10.0% |
| !! | TTGAAATCATATAATATAAT+TGG | + | chr1.3:6090012-6090031 | MS.gene051605:intron | 10.0% |
| !!! | AATATCAATATATTTTTTTG+AGG | - | chr1.3:6090850-6090869 | None:intergenic | 10.0% |
| !!! | ATATCAATATATTTTTTTGA+GGG | - | chr1.3:6090849-6090868 | None:intergenic | 10.0% |
| !!! | TTGATAATAATGATATAATT+TGG | + | chr1.3:6089919-6089938 | MS.gene051605:intron | 10.0% |
| !! | AACATCTATAAAAAAACAAA+AGG | - | chr1.3:6089709-6089728 | None:intergenic | 15.0% |
| !! | ACATCTATAAAAAAACAAAA+GGG | - | chr1.3:6089708-6089727 | None:intergenic | 15.0% |
| !! | ATAAAATTATAGAAGAGAAA+AGG | - | chr1.3:6089990-6090009 | None:intergenic | 15.0% |
| !! | ATTGATATTTATTGTTCATA+AGG | + | chr1.3:6090861-6090880 | MS.gene051605:intron | 15.0% |
| !! | TTGATATTTATTGTTCATAA+GGG | + | chr1.3:6090862-6090881 | MS.gene051605:intron | 15.0% |
| !!! | GATATTAATAATTTTTGTGA+TGG | - | chr1.3:6090823-6090842 | None:intergenic | 15.0% |
| !!! | TATCAATATATTTTTTTGAG+GGG | - | chr1.3:6090848-6090867 | None:intergenic | 15.0% |
| !!! | TGATCTATAATTTGTATTAA+AGG | - | chr1.3:6090951-6090970 | None:intergenic | 15.0% |
| !!! | TGTTTTTGTAAGAATTTTTA+TGG | - | chr1.3:6090917-6090936 | None:intergenic | 15.0% |
| !! | AATAATAACATACACATCAA+AGG | - | chr1.3:6090133-6090152 | None:intergenic | 20.0% |
| !! | ATTTGTATTAAAGGAAGTAA+AGG | - | chr1.3:6090942-6090961 | None:intergenic | 20.0% |
| !! | CATCTATAAAAAAACAAAAG+GGG | - | chr1.3:6089707-6089726 | None:intergenic | 20.0% |
| !! | TAGATTAATAATCAGATCAT+AGG | - | chr1.3:6089945-6089964 | None:intergenic | 20.0% |
| !! | TCATCATAATCATAATCTAA+TGG | - | chr1.3:6091461-6091480 | None:intergenic | 20.0% |
| !!! | ATCTTTGATTTGATTACTTT+AGG | + | chr1.3:6090221-6090240 | MS.gene051605:intron | 20.0% |
| !!! | TACCTTATATTTTGATTTCT+TGG | - | chr1.3:6090582-6090601 | None:intergenic | 20.0% |
| ! | AAAAAAGATAAAATAGAGGC+AGG | - | chr1.3:6090985-6091004 | None:intergenic | 25.0% |
| ! | AGAGAGAAGTAAAAAACAAA+GGG | - | chr1.3:6089513-6089532 | None:intergenic | 25.0% |
| ! | GTCCAAGAAATCAAAATATA+AGG | + | chr1.3:6090577-6090596 | MS.gene051605:CDS | 25.0% |
| ! | GTTTCAAAACAACACAATTA+TGG | - | chr1.3:6089808-6089827 | None:intergenic | 25.0% |
| ! | TAGTTAACATGAAAACATGT+TGG | + | chr1.3:6091214-6091233 | MS.gene051605:intron | 25.0% |
| ! | TTGATGAATTATAGAGTTGT+TGG | - | chr1.3:6090293-6090312 | None:intergenic | 25.0% |
| !! | CGATAAACGTTAAATTTTAG+TGG | - | chr1.3:6090789-6090808 | None:intergenic | 25.0% |
| !!! | ATCTTAAGCACTTTAGTTTT+AGG | - | chr1.3:6091326-6091345 | None:intergenic | 25.0% |
| !!! | TCTTAAGCACTTTAGTTTTA+GGG | - | chr1.3:6091325-6091344 | None:intergenic | 25.0% |
| AATGGATATCTTCAAAGATG+AGG | + | chr1.3:6090415-6090434 | MS.gene051605:CDS | 30.0% | |
| ACAATTCAAGACTAAGAACA+AGG | + | chr1.3:6091358-6091377 | MS.gene051605:CDS | 30.0% | |
| AGAAAATCATGATCATCATC+AGG | + | chr1.3:6089471-6089490 | MS.gene051605:intron | 30.0% | |
| AGAGTTTAACGAAATACCTT+TGG | - | chr1.3:6090708-6090727 | None:intergenic | 30.0% | |
| ATATGGACGAATAGTGAATA+AGG | - | chr1.3:6090735-6090754 | None:intergenic | 30.0% | |
| ATGATGAGACCTAGTAATTA+TGG | + | chr1.3:6090549-6090568 | MS.gene051605:CDS | 30.0% | |
| CAATATTTCTCCTGTTAATC+AGG | + | chr1.3:6089411-6089430 | MS.gene051605:intron | 30.0% | |
| CACAAATTTATCATCATCCT+TGG | + | chr1.3:6090350-6090369 | MS.gene051605:CDS | 30.0% | |
| CAGGAGAAATATTGAAGAAT+TGG | - | chr1.3:6089405-6089424 | None:intergenic | 30.0% | |
| CTATTCGTCCATATTAAAGT+AGG | + | chr1.3:6090741-6090760 | MS.gene051605:intron | 30.0% | |
| GAGAGAGAAGTAAAAAACAA+AGG | - | chr1.3:6089514-6089533 | None:intergenic | 30.0% | |
| TAATTACTAGGTCTCATCAT+TGG | - | chr1.3:6090549-6090568 | None:intergenic | 30.0% | |
| TATGGACGAATAGTGAATAA+GGG | - | chr1.3:6090734-6090753 | None:intergenic | 30.0% | |
| TCAAAACAACACAATTATGG+TGG | - | chr1.3:6089805-6089824 | None:intergenic | 30.0% | |
| ! | TTTAACTTACTTGGAGACTT+TGG | + | chr1.3:6089448-6089467 | MS.gene051605:intron | 30.0% |
| !! | ATTACTTTAGGATCATAAGC+TGG | + | chr1.3:6090233-6090252 | MS.gene051605:intron | 30.0% |
| !! | TTCTTAGTCTTGAATTGTGT+AGG | - | chr1.3:6091356-6091375 | None:intergenic | 30.0% |
| !!! | CTTAAGCACTTTAGTTTTAG+GGG | - | chr1.3:6091324-6091343 | None:intergenic | 30.0% |
| !!! | TTTTGAAACAAGACAACGTT+TGG | + | chr1.3:6089819-6089838 | MS.gene051605:intron | 30.0% |
| AGAAGTAGTTGAAGTTGTAG+AGG | - | chr1.3:6091396-6091415 | None:intergenic | 35.0% | |
| AGCAGCAAAAAGAATAGTCA+CGG | + | chr1.3:6090384-6090403 | MS.gene051605:CDS | 35.0% | |
| CCAAGTAAGTTAAAGAAGGT+AGG | - | chr1.3:6089442-6089461 | None:intergenic | 35.0% | |
| GTCTCCAAGTAAGTTAAAGA+AGG | - | chr1.3:6089446-6089465 | None:intergenic | 35.0% | |
| TCCATATTAAAGTAGGAGAG+TGG | + | chr1.3:6090748-6090767 | MS.gene051605:intron | 35.0% | |
| TGACCTTGTAGTAAGGAATT+AGG | - | chr1.3:6089379-6089398 | None:intergenic | 35.0% | |
| TGATTATGATGAAGCAGCAA+CGG | + | chr1.3:6091469-6091488 | MS.gene051605:CDS | 35.0% | |
| TTCATCAAGTGAGTCAGTTA+TGG | + | chr1.3:6090305-6090324 | MS.gene051605:CDS | 35.0% | |
| ! | CCTACCTTCTTTAACTTACT+TGG | + | chr1.3:6089439-6089458 | MS.gene051605:intron | 35.0% |
| ! | CTGTTGTTTGGTCTCATTAT+TGG | - | chr1.3:6090486-6090505 | None:intergenic | 35.0% |
| ! | GGACTAGTACCATAATTACT+AGG | - | chr1.3:6090561-6090580 | None:intergenic | 35.0% |
| ! | TTTAGTGGATCGTAACAACA+AGG | - | chr1.3:6090774-6090793 | None:intergenic | 35.0% |
| !!! | TTGGTTTTGACCTTGTAGTA+AGG | - | chr1.3:6089386-6089405 | None:intergenic | 35.0% |
| AAGCTGGCATTTCATCATGA+TGG | + | chr1.3:6090249-6090268 | MS.gene051605:CDS | 40.0% | |
| ACAACTTCAACTACTTCTGC+TGG | + | chr1.3:6091398-6091417 | MS.gene051605:CDS | 40.0% | |
| ACAATCCGAACAAACCCTAA+TGG | - | chr1.3:6090643-6090662 | None:intergenic | 40.0% | |
| GAAATACCTTTGGACCCATA+GGG | - | chr1.3:6090698-6090717 | None:intergenic | 40.0% | |
| GCAGCAAAAAGAATAGTCAC+GGG | + | chr1.3:6090385-6090404 | MS.gene051605:CDS | 40.0% | |
| GCCACTCTCCTACTTTAATA+TGG | - | chr1.3:6090752-6090771 | None:intergenic | 40.0% | |
| GGTCCTAATTCCTTACTACA+AGG | + | chr1.3:6089373-6089392 | MS.gene051605:CDS | 40.0% | |
| GTGGCTGTAATACTGTTGTT+TGG | - | chr1.3:6090498-6090517 | None:intergenic | 40.0% | |
| TGAAACAAGACAACGTTTGG+TGG | + | chr1.3:6089822-6089841 | MS.gene051605:intron | 40.0% | |
| TGGTCTCATTATTGGAGTTG+TGG | - | chr1.3:6090478-6090497 | None:intergenic | 40.0% | |
| TGTAGTAAGGAATTAGGACC+TGG | - | chr1.3:6089373-6089392 | None:intergenic | 40.0% | |
| TGTTACCGCTGTTACTACTA+GGG | - | chr1.3:6090617-6090636 | None:intergenic | 40.0% | |
| TTGTTACCGCTGTTACTACT+AGG | - | chr1.3:6090618-6090637 | None:intergenic | 40.0% | |
| TTTATCATCATCCTTGGAGC+TGG | + | chr1.3:6090356-6090375 | MS.gene051605:CDS | 40.0% | |
| TTTGCAATGCTTGTGGAATC+AGG | + | chr1.3:6091246-6091265 | MS.gene051605:CDS | 40.0% | |
| ! | CAACACCATTAGGGTTTGTT+CGG | + | chr1.3:6090635-6090654 | MS.gene051605:CDS | 40.0% |
| ! | CTTCTGGTGGATATATCTTC+TGG | + | chr1.3:6091500-6091519 | MS.gene051605:CDS | 40.0% |
| ! | TGTTACTACTAGGGCTTGTT+TGG | - | chr1.3:6090608-6090627 | None:intergenic | 40.0% |
| !! | CTTGATAGCTTTGTCAGTAG+TGG | - | chr1.3:6090517-6090536 | None:intergenic | 40.0% |
| ACAAGCCCTAGTAGTAACAG+CGG | + | chr1.3:6090609-6090628 | MS.gene051605:CDS | 45.0% | |
| ACAGCGGTAACAACACCATT+AGG | + | chr1.3:6090625-6090644 | MS.gene051605:CDS | 45.0% | |
| AGTAAGGAATTAGGACCTGG+TGG | - | chr1.3:6089370-6089389 | None:intergenic | 45.0% | |
| ATAGTCACGGGTCTGAGAAA+TGG | + | chr1.3:6090397-6090416 | MS.gene051605:CDS | 45.0% | |
| CAGCGGTAACAACACCATTA+GGG | + | chr1.3:6090626-6090645 | MS.gene051605:CDS | 45.0% | |
| CGAAATACCTTTGGACCCAT+AGG | - | chr1.3:6090699-6090718 | None:intergenic | 45.0% | |
| TTATGATGAAGCAGCAACGG+CGG | + | chr1.3:6091472-6091491 | MS.gene051605:CDS | 45.0% | |
| TTGTGGAATCAGGCAGAGAA+AGG | + | chr1.3:6091256-6091275 | MS.gene051605:CDS | 45.0% | |
| ! | CAGTCACTTTGCAATGCTTG+TGG | + | chr1.3:6091239-6091258 | MS.gene051605:intron | 45.0% |
| !! | GTAGGAGTGTCCTGATTAAC+AGG | - | chr1.3:6089424-6089443 | None:intergenic | 45.0% |
| !!! | TAATTTTTATTATTATATCA+CGG | + | chr1.3:6091078-6091097 | MS.gene051605:intron | 5.0% |
| ACTCCTCCAAAGTGGGGTAT+GGG | - | chr1.3:6090673-6090692 | None:intergenic | 50.0% | |
| CAGGCAGAGAAAGGCAAGAA+GGG | + | chr1.3:6091265-6091284 | MS.gene051605:CDS | 50.0% | |
| GAGAAAGGCAAGAAGGGCAA+TGG | + | chr1.3:6091271-6091290 | MS.gene051605:CDS | 50.0% | |
| GCAATGGCTGAAGCTGCAAA+TGG | + | chr1.3:6091287-6091306 | MS.gene051605:CDS | 50.0% | |
| GTACATCCCATACCCCACTT+TGG | + | chr1.3:6090664-6090683 | MS.gene051605:CDS | 50.0% | |
| TCAGGCAGAGAAAGGCAAGA+AGG | + | chr1.3:6091264-6091283 | MS.gene051605:CDS | 50.0% | |
| ! | CCTGTTTCTCTGAATCCACC+AGG | + | chr1.3:6089352-6089371 | MS.gene051605:CDS | 50.0% |
| !! | CCTGGTGGATTCAGAGAAAC+AGG | - | chr1.3:6089355-6089374 | None:intergenic | 50.0% |
| ATAGGGCCACTCCTCCAAAG+TGG | - | chr1.3:6090681-6090700 | None:intergenic | 55.0% | |
| CACTCCTCCAAAGTGGGGTA+TGG | - | chr1.3:6090674-6090693 | None:intergenic | 55.0% | |
| CATCCCATACCCCACTTTGG+AGG | + | chr1.3:6090667-6090686 | MS.gene051605:CDS | 55.0% | |
| GCTGCTATCTTCCAGCTCCA+AGG | - | chr1.3:6090370-6090389 | None:intergenic | 55.0% | |
| TAGGGCCACTCCTCCAAAGT+GGG | - | chr1.3:6090680-6090699 | None:intergenic | 55.0% | |
| ! | ACTTTGGAGGAGTGGCCCTA+TGG | + | chr1.3:6090680-6090699 | MS.gene051605:CDS | 55.0% |
| ! | CATACCCCACTTTGGAGGAG+TGG | + | chr1.3:6090672-6090691 | MS.gene051605:CDS | 55.0% |
| ! | CTTTGGAGGAGTGGCCCTAT+GGG | + | chr1.3:6090681-6090700 | MS.gene051605:CDS | 55.0% |
| AGGGCCACTCCTCCAAAGTG+GGG | - | chr1.3:6090679-6090698 | None:intergenic | 60.0% | |
| GAGTGGCCCTATGGGTCCAA+AGG | + | chr1.3:6090689-6090708 | MS.gene051605:CDS | 60.0% | |
| AACGGCGGCACGACTTCTGG+TGG | + | chr1.3:6091487-6091506 | MS.gene051605:CDS | 65.0% | |
| AGCAACGGCGGCACGACTTC+TGG | + | chr1.3:6091484-6091503 | MS.gene051605:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 6089346 | 6091535 | 6089346 | ID=MS.gene051605 |
| chr1.3 | mRNA | 6089346 | 6091535 | 6089346 | ID=MS.gene051605.t1;Parent=MS.gene051605 |
| chr1.3 | exon | 6089346 | 6089394 | 6089346 | ID=MS.gene051605.t1.exon1;Parent=MS.gene051605.t1 |
| chr1.3 | CDS | 6089346 | 6089394 | 6089346 | ID=cds.MS.gene051605.t1;Parent=MS.gene051605.t1 |
| chr1.3 | exon | 6089974 | 6089981 | 6089974 | ID=MS.gene051605.t1.exon2;Parent=MS.gene051605.t1 |
| chr1.3 | CDS | 6089974 | 6089981 | 6089974 | ID=cds.MS.gene051605.t1;Parent=MS.gene051605.t1 |
| chr1.3 | exon | 6090243 | 6090710 | 6090243 | ID=MS.gene051605.t1.exon3;Parent=MS.gene051605.t1 |
| chr1.3 | CDS | 6090243 | 6090710 | 6090243 | ID=cds.MS.gene051605.t1;Parent=MS.gene051605.t1 |
| chr1.3 | exon | 6091242 | 6091535 | 6091242 | ID=MS.gene051605.t1.exon4;Parent=MS.gene051605.t1 |
| chr1.3 | CDS | 6091242 | 6091535 | 6091242 | ID=cds.MS.gene051605.t1;Parent=MS.gene051605.t1 |
| Gene Sequence |
| Protein sequence |
