Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065867.t1 | KEH40695.1 | 30.2 | 325 | 172 | 7 | 28 | 301 | 37 | 357 | 7.40E-22 | 114.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065867.t1 | A0A072VRD3 | 30.2 | 325 | 172 | 7 | 28 | 301 | 37 | 357 | 5.4e-22 | 114.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene065867 | 0.842392 | 2.66E-58 | -1.69E-46 |
| MS.gene049501 | MS.gene065867 | 0.818532 | 1.87E-52 | -1.69E-46 |
| MS.gene052867 | MS.gene065867 | 0.80467 | 1.93E-49 | -1.69E-46 |
| MS.gene05288 | MS.gene065867 | 0.844919 | 5.61E-59 | -1.69E-46 |
| MS.gene05289 | MS.gene065867 | 0.846965 | 1.56E-59 | -1.69E-46 |
| MS.gene053008 | MS.gene065867 | 0.815227 | 1.03E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene065867 | 0.824551 | 7.59E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene065867 | 0.801891 | 7.27E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene065867 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene065867 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene065867 | 0.801181 | 1.02E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene065867 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene055926 | MS.gene065867 | 0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene058595 | MS.gene065867 | 0.813609 | 2.35E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene065867 | 0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene065867 | 0.802612 | 5.16E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene065867 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene065867 | 0.800289 | 1.55E-48 | -1.69E-46 |
| MS.gene060998 | MS.gene065867 | 0.802687 | 4.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065867.t1 | MTR_1g033450 | 29.538 | 325 | 174 | 7 | 28 | 301 | 37 | 357 | 9.48e-29 | 115 |
| MS.gene065867.t1 | MTR_0572s0010 | 27.442 | 215 | 139 | 2 | 88 | 302 | 224 | 421 | 3.19e-21 | 94.4 |
| MS.gene065867.t1 | MTR_1g050495 | 25.446 | 224 | 159 | 3 | 88 | 310 | 220 | 436 | 7.34e-20 | 90.5 |
| MS.gene065867.t1 | MTR_6g079380 | 25.733 | 307 | 175 | 7 | 20 | 310 | 166 | 435 | 9.18e-20 | 90.1 |
| MS.gene065867.t1 | MTR_6g078190 | 24.828 | 290 | 175 | 5 | 40 | 302 | 64 | 337 | 4.20e-19 | 88.2 |
| MS.gene065867.t1 | MTR_3g448620 | 27.962 | 211 | 145 | 3 | 88 | 298 | 215 | 418 | 5.65e-19 | 87.8 |
| MS.gene065867.t1 | MTR_6g079920 | 25.267 | 281 | 196 | 5 | 40 | 312 | 192 | 466 | 1.16e-18 | 86.7 |
| MS.gene065867.t1 | MTR_6g079920 | 20.922 | 282 | 194 | 5 | 35 | 301 | 292 | 559 | 8.97e-12 | 66.2 |
| MS.gene065867.t1 | MTR_6g077540 | 24.510 | 306 | 191 | 6 | 20 | 310 | 182 | 462 | 3.02e-18 | 85.5 |
| MS.gene065867.t1 | MTR_6g077540 | 20.070 | 284 | 194 | 6 | 35 | 301 | 291 | 558 | 8.42e-12 | 66.2 |
| MS.gene065867.t1 | MTR_6g079830 | 24.549 | 277 | 196 | 4 | 41 | 310 | 193 | 463 | 8.92e-18 | 84.3 |
| MS.gene065867.t1 | MTR_6g079830 | 21.790 | 257 | 188 | 3 | 40 | 289 | 87 | 337 | 5.78e-11 | 63.5 |
| MS.gene065867.t1 | MTR_8g107050 | 24.306 | 288 | 184 | 6 | 23 | 291 | 282 | 554 | 9.29e-18 | 84.3 |
| MS.gene065867.t1 | MTR_8g107050 | 24.306 | 288 | 184 | 6 | 23 | 291 | 282 | 554 | 1.03e-17 | 84.0 |
| MS.gene065867.t1 | MTR_6g079240 | 27.317 | 205 | 141 | 3 | 88 | 291 | 64 | 261 | 1.98e-17 | 82.8 |
| MS.gene065867.t1 | MTR_6g079240 | 21.654 | 254 | 178 | 3 | 63 | 301 | 129 | 376 | 5.63e-14 | 72.4 |
| MS.gene065867.t1 | MTR_6g078160 | 27.232 | 224 | 155 | 3 | 88 | 310 | 218 | 434 | 2.17e-17 | 82.8 |
| MS.gene065867.t1 | MTR_6g079310 | 26.389 | 216 | 151 | 3 | 88 | 302 | 176 | 384 | 2.17e-17 | 82.8 |
| MS.gene065867.t1 | MTR_6g079310 | 21.654 | 254 | 178 | 3 | 63 | 301 | 241 | 488 | 6.20e-14 | 72.4 |
| MS.gene065867.t1 | MTR_6g478210 | 25.180 | 278 | 193 | 5 | 41 | 310 | 10 | 280 | 2.61e-17 | 82.0 |
| MS.gene065867.t1 | MTR_6g079890 | 24.658 | 292 | 205 | 5 | 27 | 310 | 132 | 416 | 2.88e-17 | 82.4 |
| MS.gene065867.t1 | MTR_2g035630 | 27.602 | 221 | 152 | 3 | 91 | 310 | 223 | 436 | 3.01e-17 | 82.4 |
| MS.gene065867.t1 | MTR_2g035630 | 21.094 | 256 | 177 | 4 | 63 | 301 | 285 | 532 | 5.41e-13 | 69.7 |
| MS.gene065867.t1 | MTR_0014s0210 | 25.185 | 270 | 184 | 6 | 41 | 302 | 120 | 379 | 3.94e-17 | 82.0 |
| MS.gene065867.t1 | MTR_0014s0210 | 21.401 | 257 | 174 | 4 | 62 | 301 | 238 | 483 | 6.45e-11 | 63.5 |
| MS.gene065867.t1 | MTR_0177s0060 | 22.112 | 303 | 169 | 4 | 64 | 302 | 101 | 400 | 6.48e-17 | 81.6 |
| MS.gene065867.t1 | MTR_3g061000 | 24.000 | 250 | 167 | 4 | 77 | 310 | 205 | 447 | 9.73e-17 | 80.9 |
| MS.gene065867.t1 | MTR_0654s0010 | 28.856 | 201 | 125 | 5 | 81 | 270 | 105 | 298 | 1.12e-16 | 80.5 |
| MS.gene065867.t1 | MTR_6g079210 | 23.741 | 278 | 181 | 6 | 41 | 302 | 10 | 272 | 1.22e-16 | 80.1 |
| MS.gene065867.t1 | MTR_6g079210 | 21.277 | 282 | 189 | 6 | 37 | 301 | 111 | 376 | 9.25e-14 | 71.6 |
| MS.gene065867.t1 | MTR_0237s0070 | 24.510 | 306 | 189 | 6 | 20 | 309 | 291 | 570 | 1.41e-16 | 80.9 |
| MS.gene065867.t1 | MTR_0237s0070 | 22.441 | 254 | 176 | 5 | 63 | 301 | 420 | 667 | 2.93e-12 | 67.8 |
| MS.gene065867.t1 | MTR_6g079250 | 25.180 | 278 | 177 | 7 | 41 | 302 | 10 | 272 | 1.59e-16 | 79.7 |
| MS.gene065867.t1 | MTR_0014s0260 | 27.317 | 205 | 141 | 3 | 88 | 291 | 156 | 353 | 2.11e-16 | 79.7 |
| MS.gene065867.t1 | MTR_0019s0210 | 23.423 | 222 | 164 | 2 | 81 | 302 | 218 | 433 | 2.13e-16 | 80.1 |
| MS.gene065867.t1 | MTR_6g079180 | 24.042 | 287 | 187 | 6 | 40 | 310 | 9 | 280 | 3.05e-16 | 79.0 |
| MS.gene065867.t1 | MTR_6g079180 | 21.455 | 275 | 183 | 6 | 37 | 294 | 111 | 369 | 4.86e-13 | 69.3 |
| MS.gene065867.t1 | MTR_7g076550 | 26.275 | 255 | 177 | 4 | 48 | 302 | 198 | 441 | 3.71e-16 | 79.3 |
| MS.gene065867.t1 | MTR_6g080210 | 25.431 | 232 | 160 | 5 | 67 | 295 | 200 | 421 | 3.75e-16 | 79.3 |
| MS.gene065867.t1 | MTR_0014s0180 | 25.463 | 216 | 153 | 3 | 88 | 302 | 223 | 431 | 4.01e-16 | 79.3 |
| MS.gene065867.t1 | MTR_6g065540 | 25.468 | 267 | 168 | 5 | 41 | 291 | 178 | 429 | 5.55e-16 | 79.0 |
| MS.gene065867.t1 | MTR_6g065540 | 21.942 | 278 | 184 | 5 | 41 | 301 | 283 | 544 | 9.53e-14 | 72.0 |
| MS.gene065867.t1 | MTR_6g065560 | 27.692 | 195 | 135 | 2 | 88 | 282 | 263 | 451 | 8.77e-16 | 78.2 |
| MS.gene065867.t1 | MTR_3g034990 | 26.389 | 216 | 151 | 3 | 88 | 302 | 230 | 438 | 1.04e-15 | 77.8 |
| MS.gene065867.t1 | MTR_0308s0020 | 25.000 | 224 | 160 | 3 | 88 | 310 | 216 | 432 | 1.36e-15 | 77.4 |
| MS.gene065867.t1 | MTR_0308s0020 | 23.282 | 262 | 168 | 5 | 63 | 303 | 106 | 355 | 3.35e-11 | 64.3 |
| MS.gene065867.t1 | MTR_6g079590 | 25.000 | 280 | 177 | 6 | 41 | 303 | 275 | 538 | 1.51e-15 | 77.4 |
| MS.gene065867.t1 | MTR_6g079590 | 23.741 | 278 | 191 | 4 | 44 | 310 | 173 | 440 | 1.30e-13 | 71.6 |
| MS.gene065867.t1 | MTR_6g079590 | 21.708 | 281 | 187 | 7 | 40 | 303 | 64 | 328 | 1.88e-12 | 68.2 |
| MS.gene065867.t1 | MTR_1g045850 | 21.429 | 238 | 166 | 3 | 80 | 302 | 149 | 380 | 2.56e-15 | 76.6 |
| MS.gene065867.t1 | MTR_5g095130 | 22.764 | 246 | 166 | 4 | 74 | 304 | 615 | 851 | 3.04e-15 | 77.0 |
| MS.gene065867.t1 | MTR_4g107180 | 23.318 | 223 | 165 | 2 | 88 | 310 | 115 | 331 | 3.16e-15 | 76.3 |
| MS.gene065867.t1 | MTR_1g064390 | 24.638 | 207 | 146 | 4 | 88 | 291 | 216 | 415 | 3.18e-15 | 76.6 |
| MS.gene065867.t1 | MTR_6g078210 | 25.112 | 223 | 161 | 2 | 88 | 310 | 234 | 450 | 5.90e-15 | 75.9 |
| MS.gene065867.t1 | MTR_6g079960 | 24.476 | 286 | 187 | 5 | 40 | 310 | 170 | 441 | 7.01e-15 | 75.5 |
| MS.gene065867.t1 | MTR_7g012890 | 24.453 | 274 | 184 | 5 | 41 | 302 | 167 | 429 | 1.41e-14 | 74.7 |
| MS.gene065867.t1 | MTR_0014s0250 | 24.651 | 215 | 156 | 3 | 88 | 302 | 220 | 428 | 1.73e-14 | 74.3 |
| MS.gene065867.t1 | MTR_6g445320 | 24.651 | 215 | 149 | 3 | 88 | 302 | 219 | 420 | 3.04e-14 | 73.6 |
| MS.gene065867.t1 | MTR_6g069300 | 22.340 | 282 | 198 | 5 | 40 | 310 | 171 | 442 | 4.06e-14 | 73.2 |
| MS.gene065867.t1 | MTR_1g033960 | 22.556 | 266 | 177 | 5 | 41 | 291 | 302 | 553 | 5.41e-14 | 73.2 |
| MS.gene065867.t1 | MTR_1g033960 | 26.744 | 258 | 160 | 8 | 65 | 303 | 283 | 530 | 5.41e-11 | 63.9 |
| MS.gene065867.t1 | MTR_6g069180 | 24.373 | 279 | 182 | 4 | 40 | 303 | 63 | 327 | 5.49e-14 | 72.8 |
| MS.gene065867.t1 | MTR_6g069180 | 24.074 | 216 | 156 | 4 | 88 | 302 | 223 | 431 | 6.03e-11 | 63.5 |
| MS.gene065867.t1 | MTR_6g079220 | 22.330 | 206 | 150 | 4 | 88 | 291 | 225 | 422 | 2.07e-13 | 70.9 |
| MS.gene065867.t1 | MTR_1840s0010 | 31.111 | 135 | 87 | 2 | 88 | 222 | 207 | 335 | 2.14e-13 | 70.1 |
| MS.gene065867.t1 | MTR_1g016213 | 25.414 | 181 | 129 | 2 | 91 | 271 | 16 | 190 | 2.27e-13 | 69.7 |
| MS.gene065867.t1 | MTR_2g048635 | 26.667 | 135 | 91 | 3 | 140 | 270 | 111 | 241 | 2.82e-13 | 68.9 |
| MS.gene065867.t1 | MTR_0429s0020 | 23.256 | 215 | 159 | 2 | 88 | 302 | 233 | 441 | 6.32e-13 | 69.7 |
| MS.gene065867.t1 | MTR_4g068360 | 25.000 | 232 | 159 | 7 | 62 | 291 | 358 | 576 | 6.61e-13 | 69.7 |
| MS.gene065867.t1 | MTR_6g061120 | 24.664 | 223 | 162 | 2 | 88 | 310 | 86 | 302 | 7.28e-13 | 68.9 |
| MS.gene065867.t1 | MTR_6g471100 | 21.993 | 291 | 194 | 6 | 31 | 303 | 234 | 509 | 1.51e-12 | 68.6 |
| MS.gene065867.t1 | MTR_6g478130 | 22.963 | 270 | 180 | 5 | 65 | 310 | 29 | 294 | 1.67e-12 | 67.8 |
| MS.gene065867.t1 | MTR_6g478130 | 22.662 | 278 | 182 | 6 | 41 | 295 | 83 | 350 | 7.72e-11 | 62.8 |
| MS.gene065867.t1 | MTR_1g029490 | 20.803 | 274 | 194 | 5 | 41 | 302 | 173 | 435 | 2.09e-12 | 68.2 |
| MS.gene065867.t1 | MTR_5g077930 | 24.265 | 272 | 176 | 5 | 41 | 296 | 229 | 486 | 2.78e-12 | 67.8 |
| MS.gene065867.t1 | MTR_6g068820 | 23.318 | 223 | 165 | 3 | 88 | 310 | 141 | 357 | 2.79e-12 | 67.4 |
| MS.gene065867.t1 | MTR_0110s0060 | 21.300 | 277 | 205 | 3 | 41 | 310 | 163 | 433 | 3.09e-12 | 67.4 |
| MS.gene065867.t1 | MTR_6g069840 | 23.308 | 266 | 175 | 4 | 41 | 291 | 254 | 505 | 3.55e-12 | 67.4 |
| MS.gene065867.t1 | MTR_6g069840 | 25.434 | 173 | 119 | 5 | 92 | 262 | 207 | 371 | 1.32e-11 | 65.5 |
| MS.gene065867.t1 | MTR_6g082970 | 24.537 | 216 | 155 | 3 | 88 | 302 | 21 | 229 | 4.12e-12 | 65.5 |
| MS.gene065867.t1 | MTR_6g069840 | 23.308 | 266 | 175 | 4 | 41 | 291 | 270 | 521 | 4.34e-12 | 67.0 |
| MS.gene065867.t1 | MTR_6g069840 | 25.434 | 173 | 119 | 5 | 92 | 262 | 223 | 387 | 1.58e-11 | 65.5 |
| MS.gene065867.t1 | MTR_7g067460 | 23.600 | 250 | 165 | 6 | 64 | 295 | 112 | 353 | 4.55e-12 | 67.0 |
| MS.gene065867.t1 | MTR_3g088505 | 25.862 | 232 | 146 | 5 | 65 | 279 | 219 | 441 | 4.66e-12 | 66.6 |
| MS.gene065867.t1 | MTR_1g016220 | 25.143 | 175 | 125 | 2 | 97 | 271 | 27 | 195 | 5.11e-12 | 65.5 |
| MS.gene065867.t1 | MTR_0573s0020 | 21.875 | 256 | 175 | 5 | 63 | 301 | 8 | 255 | 5.36e-12 | 65.5 |
| MS.gene065867.t1 | MTR_6g079290 | 22.927 | 205 | 143 | 3 | 92 | 295 | 1 | 191 | 6.30e-12 | 65.5 |
| MS.gene065867.t1 | MTR_0054s0140 | 24.123 | 228 | 150 | 5 | 80 | 291 | 257 | 477 | 9.08e-12 | 65.9 |
| MS.gene065867.t1 | MTR_0054s0140 | 23.827 | 277 | 158 | 4 | 40 | 289 | 85 | 335 | 9.16e-12 | 65.9 |
| MS.gene065867.t1 | MTR_1g091880 | 25.258 | 194 | 122 | 4 | 80 | 257 | 16 | 202 | 1.05e-11 | 65.5 |
| MS.gene065867.t1 | MTR_2g049740 | 22.984 | 248 | 162 | 7 | 65 | 293 | 245 | 482 | 1.58e-11 | 65.5 |
| MS.gene065867.t1 | MTR_7g405940 | 21.277 | 235 | 161 | 5 | 72 | 289 | 224 | 451 | 3.99e-11 | 64.3 |
| MS.gene065867.t1 | MTR_5g089850 | 22.179 | 257 | 138 | 4 | 65 | 281 | 265 | 499 | 4.02e-11 | 63.9 |
| MS.gene065867.t1 | MTR_7g011500 | 25.397 | 252 | 153 | 9 | 65 | 291 | 454 | 695 | 5.54e-11 | 63.9 |
| MS.gene065867.t1 | MTR_6g068790 | 23.721 | 215 | 158 | 3 | 88 | 302 | 232 | 440 | 5.66e-11 | 63.5 |
| MS.gene065867.t1 | MTR_4g076540 | 24.609 | 256 | 165 | 6 | 72 | 305 | 560 | 809 | 5.93e-11 | 63.9 |
| MS.gene065867.t1 | MTR_2g041700 | 24.581 | 179 | 130 | 2 | 88 | 266 | 235 | 408 | 6.14e-11 | 63.5 |
| MS.gene065867.t1 | MTR_8g105170 | 22.177 | 248 | 164 | 5 | 63 | 291 | 434 | 671 | 9.15e-11 | 63.2 |
| MS.gene065867.t1 | MTR_5g029690 | 24.113 | 282 | 168 | 6 | 65 | 301 | 340 | 620 | 9.64e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065867.t1 | AT5G41170 | 24.627 | 268 | 166 | 7 | 65 | 304 | 61 | 320 | 2.60e-16 | 79.3 |
| MS.gene065867.t1 | AT3G06920 | 26.728 | 217 | 144 | 4 | 91 | 304 | 612 | 816 | 3.20e-16 | 79.7 |
| MS.gene065867.t1 | AT3G06920 | 26.728 | 217 | 144 | 4 | 91 | 304 | 626 | 830 | 3.66e-16 | 79.7 |
| MS.gene065867.t1 | AT3G06920 | 26.728 | 217 | 144 | 4 | 91 | 304 | 626 | 830 | 3.66e-16 | 79.7 |
| MS.gene065867.t1 | AT5G41170 | 24.627 | 268 | 166 | 7 | 65 | 304 | 161 | 420 | 5.38e-16 | 79.0 |
| MS.gene065867.t1 | AT5G41170 | 24.627 | 268 | 166 | 7 | 65 | 304 | 161 | 420 | 5.78e-16 | 78.6 |
| MS.gene065867.t1 | AT5G59900 | 23.052 | 308 | 184 | 7 | 37 | 299 | 191 | 490 | 4.48e-15 | 76.3 |
| MS.gene065867.t1 | AT5G59900 | 25.094 | 267 | 178 | 8 | 41 | 295 | 370 | 626 | 3.73e-11 | 64.3 |
| MS.gene065867.t1 | AT4G28010 | 23.985 | 271 | 176 | 6 | 41 | 295 | 110 | 366 | 1.15e-14 | 75.1 |
| MS.gene065867.t1 | AT1G13040 | 22.819 | 298 | 172 | 7 | 41 | 291 | 223 | 509 | 1.36e-13 | 71.6 |
| MS.gene065867.t1 | AT1G13040 | 22.819 | 298 | 172 | 7 | 41 | 291 | 223 | 509 | 1.36e-13 | 71.6 |
| MS.gene065867.t1 | AT1G64583 | 22.581 | 310 | 205 | 7 | 12 | 302 | 88 | 381 | 2.24e-13 | 70.9 |
| MS.gene065867.t1 | AT1G64583 | 22.581 | 310 | 205 | 7 | 12 | 302 | 113 | 406 | 2.39e-13 | 70.9 |
| MS.gene065867.t1 | AT1G62680 | 23.322 | 283 | 179 | 8 | 40 | 304 | 87 | 349 | 4.56e-13 | 70.1 |
| MS.gene065867.t1 | AT1G62680 | 23.322 | 283 | 179 | 8 | 40 | 304 | 87 | 349 | 4.56e-13 | 70.1 |
| MS.gene065867.t1 | AT1G62720 | 25.806 | 248 | 150 | 6 | 62 | 307 | 120 | 335 | 6.89e-13 | 69.3 |
| MS.gene065867.t1 | AT1G62930 | 22.257 | 319 | 186 | 7 | 20 | 291 | 101 | 404 | 1.10e-12 | 68.9 |
| MS.gene065867.t1 | AT1G31840 | 25.000 | 244 | 154 | 6 | 65 | 289 | 410 | 643 | 1.41e-12 | 68.9 |
| MS.gene065867.t1 | AT1G63130 | 22.945 | 292 | 190 | 6 | 19 | 291 | 130 | 405 | 1.55e-12 | 68.6 |
| MS.gene065867.t1 | AT1G63130 | 22.945 | 292 | 190 | 6 | 19 | 291 | 130 | 405 | 1.55e-12 | 68.6 |
| MS.gene065867.t1 | AT5G46580 | 25.600 | 250 | 160 | 6 | 72 | 303 | 212 | 453 | 1.57e-12 | 68.6 |
| MS.gene065867.t1 | AT1G62590 | 24.806 | 258 | 164 | 6 | 65 | 304 | 174 | 419 | 1.63e-12 | 68.6 |
| MS.gene065867.t1 | AT1G62590 | 23.077 | 273 | 191 | 5 | 30 | 291 | 75 | 339 | 3.03e-12 | 67.8 |
| MS.gene065867.t1 | AT1G62590 | 24.806 | 258 | 164 | 6 | 65 | 304 | 174 | 419 | 1.63e-12 | 68.6 |
| MS.gene065867.t1 | AT1G62590 | 23.077 | 273 | 191 | 5 | 30 | 291 | 75 | 339 | 3.03e-12 | 67.8 |
| MS.gene065867.t1 | AT5G39710 | 24.180 | 244 | 159 | 6 | 74 | 299 | 303 | 538 | 1.65e-12 | 68.6 |
| MS.gene065867.t1 | AT5G39710 | 23.529 | 204 | 139 | 5 | 91 | 288 | 405 | 597 | 8.60e-11 | 63.2 |
| MS.gene065867.t1 | AT1G09900 | 21.106 | 199 | 150 | 3 | 98 | 295 | 376 | 568 | 1.69e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065867.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065867.t1 | AT3G16710 | 21.951 | 246 | 167 | 4 | 75 | 303 | 217 | 454 | 3.13e-12 | 67.4 |
| MS.gene065867.t1 | AT3G16710 | 21.739 | 253 | 172 | 6 | 65 | 299 | 172 | 416 | 5.61e-11 | 63.5 |
| MS.gene065867.t1 | AT3G16710 | 22.222 | 234 | 157 | 4 | 75 | 291 | 217 | 442 | 4.80e-12 | 66.6 |
| MS.gene065867.t1 | AT3G16710 | 21.739 | 253 | 172 | 6 | 65 | 299 | 172 | 416 | 7.76e-11 | 63.2 |
| MS.gene065867.t1 | AT1G63330 | 23.282 | 262 | 182 | 5 | 40 | 291 | 12 | 264 | 5.05e-12 | 67.0 |
| MS.gene065867.t1 | AT1G63330 | 24.419 | 258 | 165 | 6 | 65 | 304 | 99 | 344 | 5.53e-12 | 66.6 |
| MS.gene065867.t1 | AT1G63330 | 23.282 | 262 | 182 | 5 | 40 | 291 | 12 | 264 | 5.05e-12 | 67.0 |
| MS.gene065867.t1 | AT1G63330 | 24.419 | 258 | 165 | 6 | 65 | 304 | 99 | 344 | 5.53e-12 | 66.6 |
| MS.gene065867.t1 | AT1G63330 | 23.282 | 262 | 182 | 5 | 40 | 291 | 12 | 264 | 5.05e-12 | 67.0 |
| MS.gene065867.t1 | AT1G63330 | 24.419 | 258 | 165 | 6 | 65 | 304 | 99 | 344 | 5.53e-12 | 66.6 |
| MS.gene065867.t1 | AT1G12620 | 21.782 | 202 | 152 | 2 | 102 | 303 | 283 | 478 | 5.58e-12 | 67.0 |
| MS.gene065867.t1 | AT1G12620 | 28.750 | 160 | 106 | 5 | 140 | 295 | 141 | 296 | 8.33e-12 | 66.2 |
| MS.gene065867.t1 | AT1G63080 | 23.301 | 309 | 191 | 10 | 19 | 304 | 114 | 399 | 6.14e-12 | 66.6 |
| MS.gene065867.t1 | AT1G63080 | 21.176 | 255 | 176 | 4 | 65 | 302 | 224 | 470 | 3.51e-11 | 64.3 |
| MS.gene065867.t1 | AT1G63080 | 23.301 | 309 | 191 | 10 | 19 | 304 | 114 | 399 | 6.14e-12 | 66.6 |
| MS.gene065867.t1 | AT1G63080 | 21.176 | 255 | 176 | 4 | 65 | 302 | 224 | 470 | 3.51e-11 | 64.3 |
| MS.gene065867.t1 | AT1G63080 | 23.301 | 309 | 191 | 10 | 19 | 304 | 114 | 399 | 6.14e-12 | 66.6 |
| MS.gene065867.t1 | AT1G63080 | 21.176 | 255 | 176 | 4 | 65 | 302 | 224 | 470 | 3.51e-11 | 64.3 |
| MS.gene065867.t1 | AT2G01740 | 19.421 | 242 | 167 | 4 | 63 | 302 | 73 | 288 | 8.64e-12 | 66.2 |
| MS.gene065867.t1 | AT2G02150 | 23.673 | 245 | 156 | 4 | 78 | 302 | 329 | 562 | 1.29e-11 | 65.9 |
| MS.gene065867.t1 | AT2G02150 | 23.673 | 245 | 156 | 4 | 78 | 302 | 329 | 562 | 1.29e-11 | 65.9 |
| MS.gene065867.t1 | AT1G62670 | 23.529 | 255 | 168 | 8 | 65 | 301 | 205 | 450 | 2.10e-11 | 65.1 |
| MS.gene065867.t1 | AT1G62670 | 23.529 | 255 | 168 | 8 | 65 | 301 | 205 | 450 | 2.10e-11 | 65.1 |
| MS.gene065867.t1 | AT4G26800 | 21.168 | 274 | 191 | 7 | 42 | 302 | 17 | 278 | 2.60e-11 | 64.3 |
| MS.gene065867.t1 | AT1G12700 | 23.045 | 243 | 166 | 4 | 64 | 291 | 157 | 393 | 3.19e-11 | 64.7 |
| MS.gene065867.t1 | AT1G12700 | 23.045 | 243 | 166 | 4 | 64 | 291 | 157 | 393 | 3.19e-11 | 64.7 |
| MS.gene065867.t1 | AT1G74580 | 21.633 | 245 | 166 | 5 | 65 | 291 | 375 | 611 | 3.50e-11 | 64.7 |
| MS.gene065867.t1 | AT1G74580 | 21.633 | 245 | 166 | 5 | 65 | 291 | 375 | 611 | 3.50e-11 | 64.7 |
| MS.gene065867.t1 | AT1G74580 | 21.633 | 245 | 166 | 5 | 65 | 291 | 375 | 611 | 3.50e-11 | 64.7 |
| MS.gene065867.t1 | AT3G22470 | 20.974 | 267 | 178 | 6 | 40 | 289 | 72 | 322 | 3.52e-11 | 64.3 |
| MS.gene065867.t1 | AT4G26800 | 21.168 | 274 | 191 | 7 | 42 | 302 | 87 | 348 | 3.75e-11 | 63.9 |
| MS.gene065867.t1 | AT2G31400 | 23.438 | 256 | 171 | 6 | 77 | 315 | 370 | 617 | 3.85e-11 | 64.3 |
| MS.gene065867.t1 | AT1G12700 | 23.045 | 243 | 166 | 4 | 64 | 291 | 141 | 377 | 3.95e-11 | 64.3 |
| MS.gene065867.t1 | AT3G22470 | 20.974 | 267 | 178 | 6 | 40 | 289 | 72 | 322 | 4.08e-11 | 64.3 |
| MS.gene065867.t1 | AT1G06580 | 23.148 | 216 | 155 | 4 | 90 | 304 | 32 | 237 | 4.69e-11 | 63.5 |
| MS.gene065867.t1 | AT1G06580 | 23.148 | 216 | 155 | 4 | 90 | 304 | 32 | 237 | 4.69e-11 | 63.5 |
| MS.gene065867.t1 | AT4G26800 | 21.168 | 274 | 191 | 7 | 42 | 302 | 162 | 423 | 4.72e-11 | 63.9 |
| MS.gene065867.t1 | AT2G31400 | 23.438 | 256 | 171 | 6 | 77 | 315 | 370 | 617 | 5.52e-11 | 63.9 |
| MS.gene065867.t1 | AT1G06580 | 22.791 | 215 | 157 | 3 | 90 | 304 | 138 | 343 | 8.15e-11 | 63.2 |
| MS.gene065867.t1 | AT3G07290 | 20.690 | 319 | 191 | 6 | 22 | 291 | 390 | 695 | 8.90e-11 | 63.2 |
| MS.gene065867.t1 | AT1G62910 | 22.727 | 286 | 163 | 6 | 55 | 291 | 131 | 407 | 9.74e-11 | 63.2 |
Find 68 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTCTATCATGATAAAAT+TGG | 0.139982 | 2.4:-31387697 | MS.gene065867:CDS |
| GTTGGCTTGTTTGTTAAATC+TGG | 0.157006 | 2.4:-31388291 | MS.gene065867:CDS |
| ATCTTCTTCATCATCTTCTA+TGG | 0.176300 | 2.4:-31388535 | MS.gene065867:CDS |
| GTTCCGCAGCGCTCTCTATC+TGG | 0.234547 | 2.4:-31388418 | MS.gene065867:CDS |
| CAGGTTGAGCATTGCTTATT+AGG | 0.240333 | 2.4:+31387418 | None:intergenic |
| GGCTCTCTGATGGACTATTT+TGG | 0.245917 | 2.4:-31387753 | MS.gene065867:CDS |
| GCAGTAAAGGACTTCGCATT+TGG | 0.316585 | 2.4:+31387558 | None:intergenic |
| TACTTAGATATTACCTCATT+TGG | 0.327256 | 2.4:-31387774 | MS.gene065867:CDS |
| CAGTAAAGGACTTCGCATTT+GGG | 0.338011 | 2.4:+31387559 | None:intergenic |
| TTGTTAACGTCTGTGGTAAA+TGG | 0.342942 | 2.4:-31387441 | MS.gene065867:CDS |
| GAACAAAATTTGTAATTCAT+TGG | 0.344828 | 2.4:+31388579 | None:intergenic |
| TATTGCCACTTACAGTGATA+TGG | 0.352702 | 2.4:-31387931 | MS.gene065867:intron |
| CTTTCTATCATGATAAAATT+GGG | 0.357563 | 2.4:-31387696 | MS.gene065867:CDS |
| GGTTGTACTCAACAGCCTTA+TGG | 0.358829 | 2.4:-31387658 | MS.gene065867:CDS |
| TTTGGTCATGCGTGTGAAAA+TGG | 0.364306 | 2.4:-31387630 | MS.gene065867:CDS |
| TCATGGCATACCCCTTCAAT+AGG | 0.366340 | 2.4:+31388238 | None:intergenic |
| CGTTATGCAATGTCTGTTGT+TGG | 0.372082 | 2.4:-31388309 | MS.gene065867:CDS |
| AACAGCCTTATGGAGGTCTT+TGG | 0.388961 | 2.4:-31387648 | MS.gene065867:CDS |
| TGACTTGATGTCAAAATATC+TGG | 0.392050 | 2.4:+31387797 | None:intergenic |
| ATCCACTCATCAATAATTCA+TGG | 0.399275 | 2.4:-31387879 | MS.gene065867:CDS |
| AACTCCTTCCTCTTCACAAA+AGG | 0.402673 | 2.4:+31388438 | None:intergenic |
| CAGATTTCTTAGATTTGAAA+AGG | 0.428586 | 2.4:-31387526 | MS.gene065867:CDS |
| TTCCTTTGGTTCCACCATCA+AGG | 0.433297 | 2.4:+31387283 | None:intergenic |
| GAACACAAACGTGCCCTTGA+TGG | 0.444045 | 2.4:-31387297 | MS.gene065867:CDS |
| TCTTCTTCATCATCTTCTAT+GGG | 0.450948 | 2.4:-31388534 | MS.gene065867:CDS |
| TACTGTCAATACCCTATTGA+AGG | 0.455845 | 2.4:-31388250 | MS.gene065867:CDS |
| ATTGGGAATACAGCCCAATC+TGG | 0.463417 | 2.4:-31387679 | MS.gene065867:CDS |
| TCCTTTGGTTCCACCATCAA+GGG | 0.467264 | 2.4:+31387284 | None:intergenic |
| TCTGTTAATTACTGCAGTAA+AGG | 0.468872 | 2.4:+31387545 | None:intergenic |
| AGAAACCGAAGGGCTTGTTC+CGG | 0.474472 | 2.4:+31387837 | None:intergenic |
| CAGAAATGAAGGAGTTCAAT+GGG | 0.478009 | 2.4:-31388470 | MS.gene065867:CDS |
| CCACTGCCTTGTTAAGCAAC+CGG | 0.482626 | 2.4:-31387856 | MS.gene065867:CDS |
| GCTGTTGAGTACAACCAGAT+TGG | 0.482656 | 2.4:+31387665 | None:intergenic |
| TACCTCATTTGGCTCTCTGA+TGG | 0.484871 | 2.4:-31387763 | MS.gene065867:CDS |
| CTGTTGAGTACAACCAGATT+GGG | 0.488767 | 2.4:+31387666 | None:intergenic |
| ACAAAGAGTAGTGCTTTCTC+AGG | 0.492053 | 2.4:+31387399 | None:intergenic |
| TTGGCTTGTTTGTTAAATCT+GGG | 0.492169 | 2.4:-31388290 | MS.gene065867:CDS |
| CATGGCATACCCCTTCAATA+GGG | 0.496300 | 2.4:+31388239 | None:intergenic |
| ACAGAAATGAAGGAGTTCAA+TGG | 0.498224 | 2.4:-31388471 | MS.gene065867:CDS |
| TTCCGCAGCGCTCTCTATCT+GGG | 0.500229 | 2.4:-31388417 | MS.gene065867:intron |
| GAAGAAACGAACAGAAATGA+AGG | 0.507965 | 2.4:-31388481 | MS.gene065867:CDS |
| AGCAACCGGAACAAGCCCTT+CGG | 0.509997 | 2.4:-31387842 | MS.gene065867:CDS |
| CTTGTTCCGGTTGCTTAACA+AGG | 0.514050 | 2.4:+31387850 | None:intergenic |
| ACTCCTTCCTCTTCACAAAA+GGG | 0.531722 | 2.4:+31388439 | None:intergenic |
| GCCCTTGATGGTGGAACCAA+AGG | 0.542001 | 2.4:-31387285 | MS.gene065867:CDS |
| CACAAACGTGCCCTTGATGG+TGG | 0.551888 | 2.4:-31387294 | MS.gene065867:CDS |
| TCAGAAATTGTTAACGTCTG+TGG | 0.560139 | 2.4:-31387448 | MS.gene065867:CDS |
| CCGGTTGCTTAACAAGGCAG+TGG | 0.567872 | 2.4:+31387856 | None:intergenic |
| ACTGTCAATACCCTATTGAA+GGG | 0.569698 | 2.4:-31388249 | MS.gene065867:CDS |
| TGGTGGAACCAAAGGAAAAG+AGG | 0.572747 | 2.4:-31387277 | MS.gene065867:CDS |
| GTGAAAATGGTCGAAATCCG+TGG | 0.574926 | 2.4:-31387617 | MS.gene065867:CDS |
| TGATGAGTGGATGAAATAAG+TGG | 0.575654 | 2.4:+31387890 | None:intergenic |
| CATGACCAAAGACCTCCATA+AGG | 0.612208 | 2.4:+31387643 | None:intergenic |
| GGTGGAACCAAAGGAAAAGA+GGG | 0.613088 | 2.4:-31387276 | MS.gene065867:CDS |
| AAGTGTTGGAAGGATTGAAG+AGG | 0.617326 | 2.4:-31387730 | MS.gene065867:CDS |
| GTCCATCAGAGAGCCAAATG+AGG | 0.621267 | 2.4:+31387761 | None:intergenic |
| AGTAAAGGACTTCGCATTTG+GGG | 0.623142 | 2.4:+31387560 | None:intergenic |
| AACAGTATAACACGGAAGGT+CGG | 0.624195 | 2.4:+31387347 | None:intergenic |
| CAAGCTTTAAAAGAAACCGA+AGG | 0.627260 | 2.4:+31387826 | None:intergenic |
| TGAAAACAGTATAACACGGA+AGG | 0.627817 | 2.4:+31387343 | None:intergenic |
| AAAACATAGAAAAGCATCCA+CGG | 0.628919 | 2.4:+31387600 | None:intergenic |
| AAGCTTTAAAAGAAACCGAA+GGG | 0.631235 | 2.4:+31387827 | None:intergenic |
| GGCCATGAATTATTGATGAG+TGG | 0.640779 | 2.4:+31387877 | None:intergenic |
| CTCATGAAAACAGTATAACA+CGG | 0.658543 | 2.4:+31387339 | None:intergenic |
| CTGTCAATACCCTATTGAAG+GGG | 0.658952 | 2.4:-31388248 | MS.gene065867:intron |
| TGTACTCAACAGCCTTATGG+AGG | 0.660545 | 2.4:-31387655 | MS.gene065867:CDS |
| GATGAGTGGATGAAATAAGT+GGG | 0.663581 | 2.4:+31387891 | None:intergenic |
| TACCCAGATAGAGAGCGCTG+CGG | 0.799610 | 2.4:+31388415 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTAAATGATAATATCTT+AGG | - | chr2.4:31387807-31387826 | MS.gene065867:CDS | 15.0% |
| !! | ACTTTCTATCATGATAAAAT+TGG | - | chr2.4:31388136-31388155 | MS.gene065867:intron | 20.0% |
| !! | AGTTAAATGAAATTTCCTTT+GGG | - | chr2.4:31387675-31387694 | MS.gene065867:CDS | 20.0% |
| !! | CTTTCTATCATGATAAAATT+GGG | - | chr2.4:31388137-31388156 | MS.gene065867:intron | 20.0% |
| ! | CAAAGGAAATTTCATTTAAC+TGG | + | chr2.4:31387676-31387695 | None:intergenic | 25.0% |
| ! | CAGATTTCTTAGATTTGAAA+AGG | - | chr2.4:31388307-31388326 | MS.gene065867:CDS | 25.0% |
| ! | CAGTTAAATGAAATTTCCTT+TGG | - | chr2.4:31387674-31387693 | MS.gene065867:CDS | 25.0% |
| ! | GTCTTTGCAACTTAAATTTA+GGG | - | chr2.4:31387498-31387517 | MS.gene065867:CDS | 25.0% |
| ! | GTTCATAGAGAAAAAGTTTA+AGG | - | chr2.4:31388463-31388482 | MS.gene065867:CDS | 25.0% |
| ! | TACTTAGATATTACCTCATT+TGG | - | chr2.4:31388059-31388078 | MS.gene065867:intron | 25.0% |
| !!! | AATTTTGTTCGTCATTTTAC+AGG | - | chr2.4:31387267-31387286 | MS.gene065867:CDS | 25.0% |
| !!! | ATTTTGTTCGTCATTTTACA+GGG | - | chr2.4:31387268-31387287 | MS.gene065867:CDS | 25.0% |
| !!! | CTAAATTTAAGTTGCAAAGA+CGG | + | chr2.4:31387499-31387518 | None:intergenic | 25.0% |
| AGTAGTATACATTACCACAT+CGG | + | chr2.4:31387841-31387860 | None:intergenic | 30.0% | |
| ATCCACTCATCAATAATTCA+TGG | - | chr2.4:31387954-31387973 | MS.gene065867:intron | 30.0% | |
| ATCTTCTTCATCATCTTCTA+TGG | - | chr2.4:31387298-31387317 | MS.gene065867:CDS | 30.0% | |
| ATGAATGCAAAACCAAAACA+AGG | - | chr2.4:31387614-31387633 | MS.gene065867:CDS | 30.0% | |
| CGTCTTTGCAACTTAAATTT+AGG | - | chr2.4:31387497-31387516 | MS.gene065867:CDS | 30.0% | |
| CTCATGAAAACAGTATAACA+CGG | + | chr2.4:31388497-31388516 | None:intergenic | 30.0% | |
| TCTGTTAATTACTGCAGTAA+AGG | + | chr2.4:31388291-31388310 | None:intergenic | 30.0% | |
| TCTTCTTCATCATCTTCTAT+GGG | - | chr2.4:31387299-31387318 | MS.gene065867:CDS | 30.0% | |
| TGACTTGATGTCAAAATATC+TGG | + | chr2.4:31388039-31388058 | None:intergenic | 30.0% | |
| TGATAATATCTTAGGTGTCA+AGG | - | chr2.4:31387815-31387834 | MS.gene065867:CDS | 30.0% | |
| ! | GGATGCTTTTCTATGTTTTA+GGG | - | chr2.4:31388237-31388256 | MS.gene065867:intron | 30.0% |
| ! | GTGTTATACTGTTTTCATGA+GGG | - | chr2.4:31388496-31388515 | MS.gene065867:CDS | 30.0% |
| ! | TGGATGCTTTTCTATGTTTT+AGG | - | chr2.4:31388236-31388255 | MS.gene065867:intron | 30.0% |
| !! | AAAACATAGAAAAGCATCCA+CGG | + | chr2.4:31388236-31388255 | None:intergenic | 30.0% |
| !! | AAGCTTTAAAAGAAACCGAA+GGG | + | chr2.4:31388009-31388028 | None:intergenic | 30.0% |
| !! | TTGGCTTGTTTGTTAAATCT+GGG | - | chr2.4:31387543-31387562 | MS.gene065867:CDS | 30.0% |
| !!! | TTGTTTTGGTTTTGCATTCA+TGG | + | chr2.4:31387615-31387634 | None:intergenic | 30.0% |
| AAGATCACCTAACATGCATA+TGG | + | chr2.4:31387714-31387733 | None:intergenic | 35.0% | |
| ACAGAAATGAAGGAGTTCAA+TGG | - | chr2.4:31387362-31387381 | MS.gene065867:CDS | 35.0% | |
| ACTGTCAATACCCTATTGAA+GGG | - | chr2.4:31387584-31387603 | MS.gene065867:CDS | 35.0% | |
| ATAGATGCATTGTGCAAACA+CGG | - | chr2.4:31387864-31387883 | MS.gene065867:CDS | 35.0% | |
| CAGAAATGAAGGAGTTCAAT+GGG | - | chr2.4:31387363-31387382 | MS.gene065867:CDS | 35.0% | |
| CTTCAATCCATATGCATGTT+AGG | - | chr2.4:31387704-31387723 | MS.gene065867:CDS | 35.0% | |
| GAAGAAACGAACAGAAATGA+AGG | - | chr2.4:31387352-31387371 | MS.gene065867:CDS | 35.0% | |
| GATGAGTGGATGAAATAAGT+GGG | + | chr2.4:31387945-31387964 | None:intergenic | 35.0% | |
| GTTAACCATATCACTGTAAG+TGG | + | chr2.4:31387910-31387929 | None:intergenic | 35.0% | |
| TACTGTCAATACCCTATTGA+AGG | - | chr2.4:31387583-31387602 | MS.gene065867:CDS | 35.0% | |
| TCAGAAATTGTTAACGTCTG+TGG | - | chr2.4:31388385-31388404 | MS.gene065867:intron | 35.0% | |
| TGAAAACAGTATAACACGGA+AGG | + | chr2.4:31388493-31388512 | None:intergenic | 35.0% | |
| TGATGAGTGGATGAAATAAG+TGG | + | chr2.4:31387946-31387965 | None:intergenic | 35.0% | |
| TTGTTAACGTCTGTGGTAAA+TGG | - | chr2.4:31388392-31388411 | MS.gene065867:intron | 35.0% | |
| ! | AACAAAACCCTCTTTTCCTT+TGG | + | chr2.4:31388567-31388586 | None:intergenic | 35.0% |
| ! | CGTGTTATACTGTTTTCATG+AGG | - | chr2.4:31388495-31388514 | MS.gene065867:CDS | 35.0% |
| ! | CTAACATGCATATGGATTGA+AGG | + | chr2.4:31387706-31387725 | None:intergenic | 35.0% |
| ! | TATTGCCACTTACAGTGATA+TGG | - | chr2.4:31387902-31387921 | MS.gene065867:CDS | 35.0% |
| !! | ATGGACTATTTTGGAAGTGT+TGG | - | chr2.4:31388089-31388108 | MS.gene065867:intron | 35.0% |
| !! | CAAGCTTTAAAAGAAACCGA+AGG | + | chr2.4:31388010-31388029 | None:intergenic | 35.0% |
| !! | GCAAACTCTAAACCTTGTTT+TGG | + | chr2.4:31387629-31387648 | None:intergenic | 35.0% |
| !! | GTTGGCTTGTTTGTTAAATC+TGG | - | chr2.4:31387542-31387561 | MS.gene065867:CDS | 35.0% |
| !!! | ACTATTTTGGAAGTGTTGGA+AGG | - | chr2.4:31388093-31388112 | MS.gene065867:intron | 35.0% |
| AACAGTATAACACGGAAGGT+CGG | + | chr2.4:31388489-31388508 | None:intergenic | 40.0% | |
| AACTCCTTCCTCTTCACAAA+AGG | + | chr2.4:31387398-31387417 | None:intergenic | 40.0% | |
| ACAAAGAGTAGTGCTTTCTC+AGG | + | chr2.4:31388437-31388456 | None:intergenic | 40.0% | |
| ACTCCTTCCTCTTCACAAAA+GGG | + | chr2.4:31387397-31387416 | None:intergenic | 40.0% | |
| AGTAAAGGACTTCGCATTTG+GGG | + | chr2.4:31388276-31388295 | None:intergenic | 40.0% | |
| CAGTAAAGGACTTCGCATTT+GGG | + | chr2.4:31388277-31388296 | None:intergenic | 40.0% | |
| CGTTATGCAATGTCTGTTGT+TGG | - | chr2.4:31387524-31387543 | MS.gene065867:CDS | 40.0% | |
| CTGTCAATACCCTATTGAAG+GGG | - | chr2.4:31387585-31387604 | MS.gene065867:CDS | 40.0% | |
| CTGTTGAGTACAACCAGATT+GGG | + | chr2.4:31388170-31388189 | None:intergenic | 40.0% | |
| GGATTGAAGGATTATCCCAA+AGG | + | chr2.4:31387693-31387712 | None:intergenic | 40.0% | |
| GGCCATGAATTATTGATGAG+TGG | + | chr2.4:31387959-31387978 | None:intergenic | 40.0% | |
| TATTGCGCAGTATGCATGTT+TGG | - | chr2.4:31387750-31387769 | MS.gene065867:CDS | 40.0% | |
| TGCATGTTAGGTGATCTTAG+TGG | - | chr2.4:31387716-31387735 | MS.gene065867:CDS | 40.0% | |
| TTTGGTCATGCGTGTGAAAA+TGG | - | chr2.4:31388203-31388222 | MS.gene065867:intron | 40.0% | |
| ! | CAGGTTGAGCATTGCTTATT+AGG | + | chr2.4:31388418-31388437 | None:intergenic | 40.0% |
| ! | TACTACACCCTTTTGTGAAG+AGG | - | chr2.4:31387387-31387406 | MS.gene065867:CDS | 40.0% |
| ! | TGCATGTTTGGTGATCTTAG+TGG | - | chr2.4:31387762-31387781 | MS.gene065867:CDS | 40.0% |
| !! | AAGTGTTGGAAGGATTGAAG+AGG | - | chr2.4:31388103-31388122 | MS.gene065867:intron | 40.0% |
| !!! | TTCATGAGGGCTTGTTTTGA+AGG | - | chr2.4:31388509-31388528 | MS.gene065867:CDS | 40.0% |
| ATTGGGAATACAGCCCAATC+TGG | - | chr2.4:31388154-31388173 | MS.gene065867:intron | 45.0% | |
| CATGACCAAAGACCTCCATA+AGG | + | chr2.4:31388193-31388212 | None:intergenic | 45.0% | |
| CATGGCATACCCCTTCAATA+GGG | + | chr2.4:31387597-31387616 | None:intergenic | 45.0% | |
| CTTGTTCCGGTTGCTTAACA+AGG | + | chr2.4:31387986-31388005 | None:intergenic | 45.0% | |
| GCAGTAAAGGACTTCGCATT+TGG | + | chr2.4:31388278-31388297 | None:intergenic | 45.0% | |
| GCTGTTGAGTACAACCAGAT+TGG | + | chr2.4:31388171-31388190 | None:intergenic | 45.0% | |
| GGTGGAACCAAAGGAAAAGA+GGG | - | chr2.4:31388557-31388576 | MS.gene065867:CDS | 45.0% | |
| GGTTGTACTCAACAGCCTTA+TGG | - | chr2.4:31388175-31388194 | MS.gene065867:intron | 45.0% | |
| GTGAAAATGGTCGAAATCCG+TGG | - | chr2.4:31388216-31388235 | MS.gene065867:intron | 45.0% | |
| TCATGGCATACCCCTTCAAT+AGG | + | chr2.4:31387598-31387617 | None:intergenic | 45.0% | |
| TGGTGGAACCAAAGGAAAAG+AGG | - | chr2.4:31388556-31388575 | MS.gene065867:CDS | 45.0% | |
| ! | AACAGCCTTATGGAGGTCTT+TGG | - | chr2.4:31388185-31388204 | MS.gene065867:intron | 45.0% |
| ! | ACACCCTTTTGTGAAGAGGA+AGG | - | chr2.4:31387391-31387410 | MS.gene065867:CDS | 45.0% |
| ! | TCCTTTGGTTCCACCATCAA+GGG | + | chr2.4:31388552-31388571 | None:intergenic | 45.0% |
| ! | TGTACTCAACAGCCTTATGG+AGG | - | chr2.4:31388178-31388197 | MS.gene065867:intron | 45.0% |
| ! | TTCCTTTGGTTCCACCATCA+AGG | + | chr2.4:31388553-31388572 | None:intergenic | 45.0% |
| !! | AGAGTTTGCTGCCAAGTTAC+AGG | - | chr2.4:31387640-31387659 | MS.gene065867:CDS | 45.0% |
| !! | GAGTTTGCTGCCAAGTTACA+GGG | - | chr2.4:31387641-31387660 | MS.gene065867:CDS | 45.0% |
| !! | TACCTCATTTGGCTCTCTGA+TGG | - | chr2.4:31388070-31388089 | MS.gene065867:intron | 45.0% |
| !!! | GGCTCTCTGATGGACTATTT+TGG | - | chr2.4:31388080-31388099 | MS.gene065867:intron | 45.0% |
| CTGCCAAGTTACAGGGTGTA+GGG | - | chr2.4:31387648-31387667 | MS.gene065867:CDS | 50.0% | |
| GAACACAAACGTGCCCTTGA+TGG | - | chr2.4:31388536-31388555 | MS.gene065867:CDS | 50.0% | |
| GAACCCTACACCCTGTAACT+TGG | + | chr2.4:31387654-31387673 | None:intergenic | 50.0% | |
| GTCCATCAGAGAGCCAAATG+AGG | + | chr2.4:31388075-31388094 | None:intergenic | 50.0% | |
| ! | AGAAACCGAAGGGCTTGTTC+CGG | + | chr2.4:31387999-31388018 | None:intergenic | 50.0% |
| ! | CCACTGCCTTGTTAAGCAAC+CGG | - | chr2.4:31387977-31387996 | MS.gene065867:intron | 50.0% |
| AGCAACCGGAACAAGCCCTT+CGG | - | chr2.4:31387991-31388010 | MS.gene065867:intron | 55.0% | |
| CACAAACGTGCCCTTGATGG+TGG | - | chr2.4:31388539-31388558 | MS.gene065867:CDS | 55.0% | |
| CCGGTTGCTTAACAAGGCAG+TGG | + | chr2.4:31387980-31387999 | None:intergenic | 55.0% | |
| CTTAGGTGTCAAGGCCGATG+TGG | - | chr2.4:31387824-31387843 | MS.gene065867:CDS | 55.0% | |
| GCTGCCAAGTTACAGGGTGT+AGG | - | chr2.4:31387647-31387666 | MS.gene065867:CDS | 55.0% | |
| TTCCGCAGCGCTCTCTATCT+GGG | - | chr2.4:31387416-31387435 | MS.gene065867:CDS | 55.0% | |
| !! | GCCCTTGATGGTGGAACCAA+AGG | - | chr2.4:31388548-31388567 | MS.gene065867:CDS | 55.0% |
| !! | TACCCAGATAGAGAGCGCTG+CGG | + | chr2.4:31387421-31387440 | None:intergenic | 55.0% |
| GCAGCGCTCTCTATCTGGGT+AGG | - | chr2.4:31387420-31387439 | MS.gene065867:CDS | 60.0% | |
| GTTCCGCAGCGCTCTCTATC+TGG | - | chr2.4:31387415-31387434 | MS.gene065867:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 31387257 | 31388598 | 31387257 | ID=MS.gene065867 |
| chr2.4 | mRNA | 31387257 | 31388598 | 31387257 | ID=MS.gene065867.t1;Parent=MS.gene065867 |
| chr2.4 | exon | 31388418 | 31388598 | 31388418 | ID=MS.gene065867.t1.exon1;Parent=MS.gene065867.t1 |
| chr2.4 | CDS | 31388418 | 31388598 | 31388418 | ID=cds.MS.gene065867.t1;Parent=MS.gene065867.t1 |
| chr2.4 | exon | 31388249 | 31388336 | 31388249 | ID=MS.gene065867.t1.exon2;Parent=MS.gene065867.t1 |
| chr2.4 | CDS | 31388249 | 31388336 | 31388249 | ID=cds.MS.gene065867.t1;Parent=MS.gene065867.t1 |
| chr2.4 | exon | 31387257 | 31387938 | 31387257 | ID=MS.gene065867.t1.exon3;Parent=MS.gene065867.t1 |
| chr2.4 | CDS | 31387257 | 31387938 | 31387257 | ID=cds.MS.gene065867.t1;Parent=MS.gene065867.t1 |
| Gene Sequence |
| Protein sequence |
