Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069238.t1 | XP_013444879.1 | 91.7 | 503 | 41 | 1 | 1 | 503 | 1 | 502 | 8.40E-284 | 985.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069238.t1 | B0X1Q4 | 23.9 | 348 | 230 | 8 | 115 | 444 | 71 | 401 | 9.8e-23 | 109.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069238.t1 | A0A072TN56 | 91.7 | 503 | 41 | 1 | 1 | 503 | 1 | 502 | 6.0e-284 | 985.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene069238 | 0.824788 | 6.68E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene069238 | 0.82788 | 1.23E-54 | -1.69E-46 |
| MS.gene050559 | MS.gene069238 | 0.834206 | 3.43E-56 | -1.69E-46 |
| MS.gene050561 | MS.gene069238 | 0.829927 | 3.91E-55 | -1.69E-46 |
| MS.gene050562 | MS.gene069238 | 0.834236 | 3.37E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene069238 | 0.807234 | 5.59E-50 | -1.69E-46 |
| MS.gene051492 | MS.gene069238 | 0.809154 | 2.18E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene069238 | 0.867129 | 1.72E-65 | -1.69E-46 |
| MS.gene051832 | MS.gene069238 | 0.80416 | 2.47E-49 | -1.69E-46 |
| MS.gene053094 | MS.gene069238 | 0.804314 | 2.29E-49 | -1.69E-46 |
| MS.gene053151 | MS.gene069238 | 0.804552 | 2.04E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene069238 | 0.851615 | 7.91E-61 | -1.69E-46 |
| MS.gene054892 | MS.gene069238 | 0.810057 | 1.39E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene069238 | 0.803626 | 3.19E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene069238 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene069238 | 0.834339 | 3.17E-56 | -1.69E-46 |
| MS.gene059774 | MS.gene069238 | 0.824875 | 6.37E-54 | -1.69E-46 |
| MS.gene060373 | MS.gene069238 | 0.812689 | 3.74E-51 | -1.69E-46 |
| MS.gene060697 | MS.gene069238 | 0.821649 | 3.61E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069238.t1 | MTR_8g031450 | 94.235 | 503 | 28 | 1 | 1 | 503 | 1 | 502 | 0.0 | 1001 |
| MS.gene069238.t1 | MTR_8g031470 | 75.800 | 500 | 102 | 6 | 6 | 503 | 3 | 485 | 0.0 | 783 |
| MS.gene069238.t1 | MTR_8g031470 | 69.200 | 500 | 98 | 7 | 6 | 503 | 3 | 448 | 0.0 | 692 |
| MS.gene069238.t1 | MTR_0014s0440 | 60.563 | 426 | 163 | 3 | 81 | 503 | 61 | 484 | 0.0 | 563 |
| MS.gene069238.t1 | MTR_0014s0440 | 60.563 | 426 | 163 | 3 | 81 | 503 | 72 | 495 | 0.0 | 563 |
| MS.gene069238.t1 | MTR_5g010500 | 54.309 | 499 | 187 | 9 | 20 | 496 | 6 | 485 | 0.0 | 553 |
| MS.gene069238.t1 | MTR_8g031290 | 57.309 | 431 | 180 | 3 | 73 | 501 | 59 | 487 | 0.0 | 550 |
| MS.gene069238.t1 | MTR_7g076890 | 53.846 | 416 | 181 | 6 | 73 | 482 | 16 | 426 | 2.08e-171 | 491 |
| MS.gene069238.t1 | MTR_7g076860 | 55.584 | 394 | 169 | 3 | 95 | 482 | 3 | 396 | 6.52e-171 | 489 |
| MS.gene069238.t1 | MTR_3g464000 | 47.696 | 369 | 185 | 5 | 113 | 480 | 104 | 465 | 1.28e-126 | 379 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069238.t1 | AT2G45830 | 62.033 | 482 | 165 | 6 | 27 | 501 | 36 | 506 | 0.0 | 625 |
| MS.gene069238.t1 | AT2G45830 | 62.033 | 482 | 165 | 6 | 27 | 501 | 36 | 506 | 0.0 | 625 |
| MS.gene069238.t1 | AT3G61270 | 58.824 | 493 | 180 | 5 | 18 | 503 | 9 | 485 | 0.0 | 601 |
| MS.gene069238.t1 | AT5G23850 | 62.471 | 429 | 152 | 4 | 76 | 497 | 96 | 522 | 0.0 | 580 |
| MS.gene069238.t1 | AT2G45830 | 71.233 | 365 | 104 | 1 | 138 | 501 | 1 | 365 | 0.0 | 567 |
| MS.gene069238.t1 | AT2G45830 | 71.233 | 365 | 104 | 1 | 138 | 501 | 1 | 365 | 0.0 | 567 |
| MS.gene069238.t1 | AT2G45830 | 71.233 | 365 | 104 | 1 | 138 | 501 | 1 | 365 | 0.0 | 567 |
| MS.gene069238.t1 | AT2G45830 | 71.233 | 365 | 104 | 1 | 138 | 501 | 1 | 365 | 0.0 | 567 |
| MS.gene069238.t1 | AT3G48980 | 59.397 | 431 | 166 | 3 | 77 | 498 | 96 | 526 | 0.0 | 562 |
| MS.gene069238.t1 | AT3G48980 | 59.122 | 433 | 168 | 3 | 77 | 500 | 90 | 522 | 0.0 | 561 |
| MS.gene069238.t1 | AT3G61270 | 68.852 | 366 | 114 | 0 | 138 | 503 | 1 | 366 | 0.0 | 546 |
| MS.gene069238.t1 | AT1G63420 | 58.513 | 417 | 162 | 4 | 96 | 501 | 150 | 566 | 6.82e-178 | 513 |
| MS.gene069238.t1 | AT3G61280 | 48.096 | 499 | 240 | 5 | 22 | 501 | 24 | 522 | 3.46e-170 | 492 |
| MS.gene069238.t1 | AT2G45840 | 51.878 | 426 | 194 | 4 | 82 | 501 | 86 | 506 | 7.08e-163 | 473 |
| MS.gene069238.t1 | AT3G61290 | 52.941 | 425 | 189 | 4 | 83 | 501 | 17 | 436 | 1.99e-162 | 469 |
| MS.gene069238.t1 | AT1G07220 | 42.919 | 459 | 236 | 9 | 40 | 479 | 22 | 473 | 2.38e-134 | 400 |
| MS.gene069238.t1 | AT1G63420 | 59.306 | 317 | 123 | 3 | 87 | 397 | 141 | 457 | 8.11e-134 | 397 |
| MS.gene069238.t1 | AT3G61280 | 46.505 | 329 | 159 | 4 | 22 | 333 | 24 | 352 | 9.54e-100 | 306 |
Find 131 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTTCTTGTAAAGTTAA+AGG | 0.172099 | 8.2:+66823057 | None:intergenic |
| ATAGAGTACCTTATGCTTAT+TGG | 0.187130 | 8.2:-66824437 | MS.gene069238:CDS |
| TATTGTAACTTTAGCCTTCT+TGG | 0.194591 | 8.2:+66826803 | None:intergenic |
| AAACATATCTTAAACTCTTC+TGG | 0.202488 | 8.2:-66826860 | MS.gene069238:CDS |
| CATTTACTATTATCTCTAAT+TGG | 0.229440 | 8.2:+66823690 | None:intergenic |
| TGTTCCCAGATTGGTCCTTT+TGG | 0.251598 | 8.2:-66825329 | MS.gene069238:CDS |
| GAAAATCTTGAAGGCTAGTT+TGG | 0.275454 | 8.2:-66822447 | MS.gene069238:intron |
| CCCTGGCAAGTTGCCTGATT+TGG | 0.297539 | 8.2:-66825469 | MS.gene069238:CDS |
| TCTTAAATTTGCTGTGGATT+GGG | 0.302591 | 8.2:-66823661 | MS.gene069238:CDS |
| TTCCTAGTTGCAGCAACATT+AGG | 0.310919 | 8.2:+66824405 | None:intergenic |
| CTCTTAAATTTGCTGTGGAT+TGG | 0.326139 | 8.2:-66823662 | MS.gene069238:CDS |
| TCCATCCCTGTCGGAGTTGC+CGG | 0.327059 | 8.2:+66822376 | None:intergenic |
| AAAGGAGGTGGTGCAGCATT+TGG | 0.343015 | 8.2:+66825390 | None:intergenic |
| TTGTTCAGATCAAGGGAGTT+TGG | 0.348323 | 8.2:-66825358 | MS.gene069238:CDS |
| CTTTGTGTTGTTTGTTTATG+TGG | 0.349356 | 8.2:+66825808 | None:intergenic |
| CTTGTCCCTCATACTTTAGA+TGG | 0.351063 | 8.2:-66825680 | MS.gene069238:CDS |
| CATACAAGAGGATTTAGATA+TGG | 0.359929 | 8.2:-66823286 | MS.gene069238:CDS |
| TCCTAGTTGCAGCAACATTA+GGG | 0.365225 | 8.2:+66824406 | None:intergenic |
| ACATATCAGGCACAAGCAAT+AGG | 0.367131 | 8.2:-66823327 | MS.gene069238:intron |
| AAATTAGCCTTATGAATAAC+AGG | 0.368661 | 8.2:+66825420 | None:intergenic |
| AACATATCTTAAACTCTTCT+GGG | 0.371728 | 8.2:-66826859 | MS.gene069238:CDS |
| TCTGAACAATATCTAAATAA+AGG | 0.372325 | 8.2:+66825372 | None:intergenic |
| TAAAGTATGAGGGACAAGTA+TGG | 0.379391 | 8.2:+66825685 | None:intergenic |
| TGTAAAGTTAAAGGATCATA+TGG | 0.380829 | 8.2:+66823066 | None:intergenic |
| AAATATATACTTGTATGTAT+AGG | 0.396627 | 8.2:+66824334 | None:intergenic |
| TTATGTTTGATTGTGAAGAT+AGG | 0.400717 | 8.2:-66825443 | MS.gene069238:CDS |
| TTTAGATATTGTTCAGATCA+AGG | 0.403575 | 8.2:-66825366 | MS.gene069238:CDS |
| TGGATATTGTGTTCCCAGAT+TGG | 0.404783 | 8.2:-66825338 | MS.gene069238:CDS |
| TTATTAAAGTACATAATTGC+AGG | 0.406413 | 8.2:-66825864 | MS.gene069238:intron |
| TTTAAGGTTGTTATTGTGGA+TGG | 0.409621 | 8.2:-66825579 | MS.gene069238:CDS |
| CATATCAGGCACAAGCAATA+GGG | 0.409703 | 8.2:-66823326 | MS.gene069238:intron |
| CAAGAGATGTGTTCACTTTG+TGG | 0.415967 | 8.2:-66825518 | MS.gene069238:CDS |
| AGTTAGTGAGAAATACATTA+TGG | 0.416709 | 8.2:-66823796 | MS.gene069238:CDS |
| CATCCCCAAAAGGACCAATC+TGG | 0.419621 | 8.2:+66825324 | None:intergenic |
| AAAACTTAACCTTAATCATT+GGG | 0.422945 | 8.2:+66822331 | None:intergenic |
| CCTCCACCGGCAACTCCGAC+AGG | 0.424036 | 8.2:-66822382 | MS.gene069238:CDS |
| TGGATCCATTACAACACTAT+TGG | 0.426661 | 8.2:-66823713 | MS.gene069238:CDS |
| ATGGATCCATCTAAAGTATG+AGG | 0.427483 | 8.2:+66825674 | None:intergenic |
| ATGCTACATCAAAAGATGAT+TGG | 0.430911 | 8.2:-66824365 | MS.gene069238:CDS |
| TCCAAATCAGGCAACTTGCC+AGG | 0.431840 | 8.2:+66825468 | None:intergenic |
| ACAGCTCCTTGAGGTATAGT+TGG | 0.440110 | 8.2:+66823201 | None:intergenic |
| GTGATCCCTTTCTCTCTCCA+TGG | 0.440254 | 8.2:+66825639 | None:intergenic |
| TCAAACATAAGTTCCAAATC+AGG | 0.446282 | 8.2:+66825456 | None:intergenic |
| GGTTACAAGAAATCAAGCTT+AGG | 0.447993 | 8.2:-66824208 | MS.gene069238:CDS |
| AAGAGATGTGTTCACTTTGT+GGG | 0.454524 | 8.2:-66825517 | MS.gene069238:CDS |
| TGGTACACAAAGGAAATTCA+TGG | 0.455426 | 8.2:-66823142 | MS.gene069238:CDS |
| TTAAAACCATGGAGAGAGAA+AGG | 0.456309 | 8.2:-66825645 | MS.gene069238:CDS |
| ACAATGGCATGTGATGTAAT+TGG | 0.458295 | 8.2:-66823162 | MS.gene069238:CDS |
| TGATTTCTTGTAACCTTGAG+TGG | 0.459596 | 8.2:+66824216 | None:intergenic |
| ATCCTTAAAGAGATAAAAGA+AGG | 0.461536 | 8.2:-66824483 | MS.gene069238:CDS |
| CTTAAATTTGCTGTGGATTG+GGG | 0.462415 | 8.2:-66823660 | MS.gene069238:CDS |
| GAAATTCATGGAGGAGTCAA+TGG | 0.462936 | 8.2:-66823130 | MS.gene069238:CDS |
| CCTGTCGGAGTTGCCGGTGG+AGG | 0.465133 | 8.2:+66822382 | None:intergenic |
| TATATTACCTATGGGTGCAT+TGG | 0.467864 | 8.2:+66824182 | None:intergenic |
| AAAAGCTAATTCAACAAGAC+AGG | 0.470223 | 8.2:-66823028 | MS.gene069238:intron |
| GGGAAACAAACATGCTGATA+AGG | 0.472868 | 8.2:-66823640 | MS.gene069238:intron |
| ATTGGCCAATAGTGTTGTAA+TGG | 0.475825 | 8.2:+66823708 | None:intergenic |
| ATGTAGCATTGCATTTCAAA+AGG | 0.477688 | 8.2:+66824379 | None:intergenic |
| AGGTATAAGATTTATATAGA+AGG | 0.477784 | 8.2:-66823831 | MS.gene069238:CDS |
| AACTTGGAGGGTATACTAGA+AGG | 0.479795 | 8.2:-66822422 | MS.gene069238:CDS |
| TTTCCACTTAGATGCACCTA+TGG | 0.485480 | 8.2:-66825777 | MS.gene069238:CDS |
| CACTTCTCTTAAATTTGCTG+TGG | 0.490212 | 8.2:-66823667 | MS.gene069238:CDS |
| GAAGGCTAGTTTGGACAACT+TGG | 0.490481 | 8.2:-66822438 | MS.gene069238:intron |
| GGAGAGAGAAAGGGATCACT+AGG | 0.498557 | 8.2:-66825635 | MS.gene069238:CDS |
| TTAGATATTGTTCAGATCAA+GGG | 0.500259 | 8.2:-66825365 | MS.gene069238:CDS |
| GTACCTTATGCTTATTGGAA+GGG | 0.503766 | 8.2:-66824432 | MS.gene069238:CDS |
| TACCTTATGCTTATTGGAAG+GGG | 0.503930 | 8.2:-66824431 | MS.gene069238:CDS |
| AGGGATCACTAGGGAAATGT+TGG | 0.504622 | 8.2:-66825625 | MS.gene069238:CDS |
| TTTATATAGAAGGATGGGCT+TGG | 0.509845 | 8.2:-66823821 | MS.gene069238:CDS |
| AGATAGGCCTGTTATTCATA+AGG | 0.511562 | 8.2:-66825427 | MS.gene069238:CDS |
| GGCTAGTTTGGACAACTTGG+AGG | 0.514697 | 8.2:-66822435 | MS.gene069238:CDS |
| TTCCCCTTCCAATAAGCATA+AGG | 0.515441 | 8.2:+66824429 | None:intergenic |
| AGATGTATGTGGAAAAGTAT+AGG | 0.517281 | 8.2:-66825554 | MS.gene069238:CDS |
| GAGATGTTTCTTCACCAAGA+AGG | 0.520532 | 8.2:-66826817 | MS.gene069238:CDS |
| ATAAGATTTATATAGAAGGA+TGG | 0.521449 | 8.2:-66823827 | MS.gene069238:CDS |
| ATCCCCAAAAGGACCAATCT+GGG | 0.523594 | 8.2:+66825325 | None:intergenic |
| GTTACAAGAAATCAAGCTTA+GGG | 0.524559 | 8.2:-66824207 | MS.gene069238:CDS |
| TAGCATTTACCATCCCCAAA+AGG | 0.526190 | 8.2:+66825314 | None:intergenic |
| TCTCCATAGGTGCATCTAAG+TGG | 0.531658 | 8.2:+66825774 | None:intergenic |
| AGTACCTTATGCTTATTGGA+AGG | 0.533255 | 8.2:-66824433 | MS.gene069238:CDS |
| TAAAACCATGGAGAGAGAAA+GGG | 0.538306 | 8.2:-66825644 | MS.gene069238:CDS |
| TAAGATTTATATAGAAGGAT+GGG | 0.538690 | 8.2:-66823826 | MS.gene069238:CDS |
| TGTTTATGTGGATTGATGAA+AGG | 0.545807 | 8.2:+66825820 | None:intergenic |
| AAAGTATGAGGGACAAGTAT+GGG | 0.545831 | 8.2:+66825686 | None:intergenic |
| TATTAAAGTACATAATTGCA+GGG | 0.546277 | 8.2:-66825863 | MS.gene069238:intron |
| GATCACTAGGGAAATGTTGG+AGG | 0.547879 | 8.2:-66825622 | MS.gene069238:CDS |
| ATCCCTGTCGGAGTTGCCGG+TGG | 0.554045 | 8.2:+66822379 | None:intergenic |
| GACGATTGCGAAGCCTCCAC+CGG | 0.556209 | 8.2:-66822395 | MS.gene069238:CDS |
| ACCGGCAACTCCGACAGGGA+TGG | 0.570000 | 8.2:-66822377 | MS.gene069238:CDS |
| GTTAAAGGATCATATGGAGG+AGG | 0.572145 | 8.2:+66823072 | None:intergenic |
| AACTATACCTCAAGGAGCTG+TGG | 0.573210 | 8.2:-66823199 | MS.gene069238:CDS |
| AGCTAGCAAATTCATACAAG+AGG | 0.580152 | 8.2:-66823298 | MS.gene069238:CDS |
| CAGAGACAAATATAAAGCCA+TGG | 0.587033 | 8.2:-66824512 | MS.gene069238:CDS |
| CCAAATCAGGCAACTTGCCA+GGG | 0.588415 | 8.2:+66825469 | None:intergenic |
| GGGTCTAACATATAATGTCA+TGG | 0.588604 | 8.2:+66823764 | None:intergenic |
| ATAGCTACCACCACTGTGGT+TGG | 0.596622 | 8.2:-66826783 | MS.gene069238:CDS |
| CAATATCTAAATAAAGGAGG+TGG | 0.601684 | 8.2:+66825378 | None:intergenic |
| TATGGAGGAGGAATAGTGCA+TGG | 0.604369 | 8.2:+66823084 | None:intergenic |
| AGAGATGTGTTCACTTTGTG+GGG | 0.604516 | 8.2:-66825516 | MS.gene069238:CDS |
| ACCCTAATGTTGCTGCAACT+AGG | 0.605182 | 8.2:-66824407 | MS.gene069238:CDS |
| TAGGGAACCAATGCACCCAT+AGG | 0.605662 | 8.2:-66824189 | MS.gene069238:intron |
| CATGGAGGAGTCAATGGTGA+AGG | 0.605682 | 8.2:-66823124 | MS.gene069238:CDS |
| TTCAAACCAACTATACCTCA+AGG | 0.608229 | 8.2:-66823207 | MS.gene069238:CDS |
| ATATCAGGCACAAGCAATAG+GGG | 0.609154 | 8.2:-66823325 | MS.gene069238:intron |
| TATCTTAAACTCTTCTGGGG+TGG | 0.610291 | 8.2:-66826855 | MS.gene069238:CDS |
| TCCATGAAGATTTAAAACCA+TGG | 0.611046 | 8.2:-66825656 | MS.gene069238:CDS |
| GCTAGTTTGGACAACTTGGA+GGG | 0.612742 | 8.2:-66822434 | MS.gene069238:CDS |
| CTCCACCGGCAACTCCGACA+GGG | 0.619420 | 8.2:-66822381 | MS.gene069238:CDS |
| TGTGGATGGAAAGATGTATG+TGG | 0.621271 | 8.2:-66825565 | MS.gene069238:CDS |
| TGGATCCATCTAAAGTATGA+GGG | 0.622254 | 8.2:+66825675 | None:intergenic |
| AAAGTTAAAGGATCATATGG+AGG | 0.624764 | 8.2:+66823069 | None:intergenic |
| CAAAAGAAATCCATCCCTGT+CGG | 0.628067 | 8.2:+66822367 | None:intergenic |
| AAGGGAACAAACAGACCAAG+TGG | 0.633365 | 8.2:-66824464 | MS.gene069238:CDS |
| TCCTTAAAGAGATAAAAGAA+GGG | 0.636766 | 8.2:-66824482 | MS.gene069238:CDS |
| GAACAATATCTAAATAAAGG+AGG | 0.638895 | 8.2:+66825375 | None:intergenic |
| TGGGATAAAGAATCCACTCA+AGG | 0.640081 | 8.2:-66824229 | MS.gene069238:CDS |
| CAATTATTGAGAATGTACCC+TGG | 0.642475 | 8.2:-66825486 | MS.gene069238:CDS |
| GAGAGAGAAAGGGATCACTA+GGG | 0.642556 | 8.2:-66825634 | MS.gene069238:CDS |
| GTGATGTAATTGGTACACAA+AGG | 0.644655 | 8.2:-66823152 | MS.gene069238:CDS |
| GAACAAACAGACCAAGTGGA+AGG | 0.645321 | 8.2:-66824460 | MS.gene069238:CDS |
| GTGCATGGATTTAAATCACT+AGG | 0.647032 | 8.2:+66823099 | None:intergenic |
| CAAAACTCCACAGCTCCTTG+AGG | 0.648484 | 8.2:+66823192 | None:intergenic |
| ATCACTAGGGAAATGTTGGA+GGG | 0.649801 | 8.2:-66825621 | MS.gene069238:CDS |
| AGGTACTCTATCCTTCCACT+TGG | 0.660422 | 8.2:+66824449 | None:intergenic |
| AAACAAACCAACCACAGTGG+TGG | 0.666348 | 8.2:+66826776 | None:intergenic |
| ATTCAACTCAAACATGAACA+AGG | 0.670929 | 8.2:-66826889 | None:intergenic |
| ACATATCTTAAACTCTTCTG+GGG | 0.672048 | 8.2:-66826858 | MS.gene069238:CDS |
| TCAGGCACAAGCAATAGGGG+AGG | 0.683802 | 8.2:-66823322 | MS.gene069238:intron |
| TACAATAGCTACCACCACTG+TGG | 0.741658 | 8.2:-66826787 | MS.gene069238:CDS |
| TACACAAAGGAAATTCATGG+AGG | 0.749892 | 8.2:-66823139 | MS.gene069238:CDS |
| ACAAAACAAACCAACCACAG+TGG | 0.751123 | 8.2:+66826773 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTTTTAAATTATTAG+CGG | + | chr8.2:66825716-66825735 | None:intergenic | 10.0% |
| !! | AAATATATACTTGTATGTAT+AGG | + | chr8.2:66824891-66824910 | None:intergenic | 15.0% |
| !! | AAATATTACCATTACATAAA+TGG | + | chr8.2:66824493-66824512 | None:intergenic | 15.0% |
| !! | TTGTATGATATAAATATTTG+TGG | + | chr8.2:66824359-66824378 | None:intergenic | 15.0% |
| !!! | AAAATATTTACGATGTTTTT+CGG | + | chr8.2:66823987-66824006 | None:intergenic | 15.0% |
| !!! | CAAATAAAAATTTGTTAGAT+TGG | + | chr8.2:66826503-66826522 | None:intergenic | 15.0% |
| !!! | CAATCTAACAAATTTTTATT+TGG | - | chr8.2:66826501-66826520 | MS.gene069238:intron | 15.0% |
| !!! | TTTGTTTTTACTCTAATTTT+TGG | + | chr8.2:66826421-66826440 | None:intergenic | 15.0% |
| !! | AAAAGTTCTTGTAAAGTTAA+AGG | + | chr8.2:66826168-66826187 | None:intergenic | 20.0% |
| !! | AAAGTAATTGGATCAAATTT+GGG | + | chr8.2:66823309-66823328 | None:intergenic | 20.0% |
| !! | AATTAGTATTTACCGAATAA+CGG | - | chr8.2:66826365-66826384 | MS.gene069238:intron | 20.0% |
| !! | ACAAATATGGACATAAATAT+TGG | - | chr8.2:66825668-66825687 | MS.gene069238:CDS | 20.0% |
| !! | AGGTATAAGATTTATATAGA+AGG | - | chr8.2:66825391-66825410 | MS.gene069238:CDS | 20.0% |
| !! | AGTGATATTTATATTACCTA+TGG | + | chr8.2:66825052-66825071 | None:intergenic | 20.0% |
| !! | ATAAGATTTATATAGAAGGA+TGG | - | chr8.2:66825395-66825414 | MS.gene069238:CDS | 20.0% |
| !! | ATGAAAAAGTCATAGAAATT+GGG | + | chr8.2:66825481-66825500 | None:intergenic | 20.0% |
| !! | CAATAAAAAGAATATGTGTT+GGG | + | chr8.2:66823129-66823148 | None:intergenic | 20.0% |
| !! | CATTTACTATTATCTCTAAT+TGG | + | chr8.2:66825535-66825554 | None:intergenic | 20.0% |
| !! | GATATTCTTTACATAAAACA+GGG | - | chr8.2:66824687-66824706 | MS.gene069238:intron | 20.0% |
| !! | GGAATTAAAATAGTATGTTA+TGG | - | chr8.2:66825097-66825116 | MS.gene069238:intron | 20.0% |
| !! | GTGATATTTATATTACCTAT+GGG | + | chr8.2:66825051-66825070 | None:intergenic | 20.0% |
| !! | TAAGATTTATATAGAAGGAT+GGG | - | chr8.2:66825396-66825415 | MS.gene069238:CDS | 20.0% |
| !! | TATTAAAGTACATAATTGCA+GGG | - | chr8.2:66823359-66823378 | MS.gene069238:intron | 20.0% |
| !! | TCAATAAAAAGAATATGTGT+TGG | + | chr8.2:66823130-66823149 | None:intergenic | 20.0% |
| !! | TCTGAACAATATCTAAATAA+AGG | + | chr8.2:66823853-66823872 | None:intergenic | 20.0% |
| !! | TGATATTCTTTACATAAAAC+AGG | - | chr8.2:66824686-66824705 | MS.gene069238:intron | 20.0% |
| !! | TTAGTATGAAAAATTAGCAA+TGG | - | chr8.2:66822563-66822582 | MS.gene069238:intron | 20.0% |
| !! | TTATTAAAGTACATAATTGC+AGG | - | chr8.2:66823358-66823377 | MS.gene069238:intron | 20.0% |
| !! | TTCAGTGTAATTATATATGT+TGG | - | chr8.2:66825741-66825760 | MS.gene069238:CDS | 20.0% |
| !!! | AAAAAGAACAGCAAATTTTA+AGG | - | chr8.2:66823627-66823646 | MS.gene069238:intron | 20.0% |
| !!! | AAATTGAAATTCCATTTTTC+CGG | + | chr8.2:66825232-66825251 | None:intergenic | 20.0% |
| !!! | AAATTTTAAGGTTGTTATTG+TGG | - | chr8.2:66823639-66823658 | MS.gene069238:intron | 20.0% |
| !!! | AATTTGTCTCTAATTTTGTT+AGG | - | chr8.2:66822596-66822615 | MS.gene069238:intron | 20.0% |
| !!! | ACATTTTTTGCTTATAAGTT+GGG | - | chr8.2:66824261-66824280 | MS.gene069238:intron | 20.0% |
| !!! | ACTCTCAAATTATTTTATGT+TGG | - | chr8.2:66824217-66824236 | MS.gene069238:CDS | 20.0% |
| !!! | GCTCAAATAAGTATTTTTTA+AGG | - | chr8.2:66822775-66822794 | MS.gene069238:intron | 20.0% |
| !!! | TATTGGCTAAATAAAAAGAA+TGG | - | chr8.2:66826237-66826256 | MS.gene069238:intron | 20.0% |
| ! | AAAAAGAATGGACAATAGTA+TGG | - | chr8.2:66826249-66826268 | MS.gene069238:intron | 25.0% |
| ! | AAAAAGAGAGAAAATCTTGA+AGG | - | chr8.2:66826766-66826785 | MS.gene069238:CDS | 25.0% |
| ! | AAACATATCTTAAACTCTTC+TGG | - | chr8.2:66822362-66822381 | MS.gene069238:CDS | 25.0% |
| ! | AAATTTGGGAAGATGAATAT+TGG | - | chr8.2:66826220-66826239 | MS.gene069238:intron | 25.0% |
| ! | AACATATAACACAACTAATG+AGG | + | chr8.2:66822714-66822733 | None:intergenic | 25.0% |
| ! | AACATATCTTAAACTCTTCT+GGG | - | chr8.2:66822363-66822382 | MS.gene069238:CDS | 25.0% |
| ! | AACCTAATAAAATGACAACA+TGG | + | chr8.2:66824320-66824339 | None:intergenic | 25.0% |
| ! | AATAGTATGTTATGGTAAAG+TGG | - | chr8.2:66825105-66825124 | MS.gene069238:intron | 25.0% |
| ! | AGTTAGTGAGAAATACATTA+TGG | - | chr8.2:66825426-66825445 | MS.gene069238:CDS | 25.0% |
| ! | ATATGTTGTGACATAATTCT+AGG | - | chr8.2:66823282-66823301 | MS.gene069238:CDS | 25.0% |
| ! | ATCCTTAAAGAGATAAAAGA+AGG | - | chr8.2:66824739-66824758 | MS.gene069238:intron | 25.0% |
| ! | ATCTCATTCTACAAATAGAA+AGG | + | chr8.2:66823951-66823970 | None:intergenic | 25.0% |
| ! | ATTCCCTAAAATTACATATC+AGG | - | chr8.2:66825882-66825901 | MS.gene069238:intron | 25.0% |
| ! | CAAAGTAATTGGATCAAATT+TGG | + | chr8.2:66823310-66823329 | None:intergenic | 25.0% |
| ! | GAACAATATCTAAATAAAGG+AGG | + | chr8.2:66823850-66823869 | None:intergenic | 25.0% |
| ! | GATGAAAAAGTCATAGAAAT+TGG | + | chr8.2:66825482-66825501 | None:intergenic | 25.0% |
| ! | TAGTTTCTTGTCAAAGTAAT+TGG | + | chr8.2:66823321-66823340 | None:intergenic | 25.0% |
| ! | TCCTTAAAGAGATAAAAGAA+GGG | - | chr8.2:66824740-66824759 | MS.gene069238:intron | 25.0% |
| ! | TGTAAAGTTAAAGGATCATA+TGG | + | chr8.2:66826159-66826178 | None:intergenic | 25.0% |
| ! | TGTATATATGTTTGTGTCAT+AGG | - | chr8.2:66824968-66824987 | MS.gene069238:intron | 25.0% |
| ! | TTAAGTCATAAATTGAACCA+AGG | + | chr8.2:66822819-66822838 | None:intergenic | 25.0% |
| ! | TTAGATATTGTTCAGATCAA+GGG | - | chr8.2:66823857-66823876 | MS.gene069238:intron | 25.0% |
| ! | TTATGTTTGATTGTGAAGAT+AGG | - | chr8.2:66823779-66823798 | MS.gene069238:CDS | 25.0% |
| ! | TTGGAATATAAAATGTGTTC+CGG | - | chr8.2:66825210-66825229 | MS.gene069238:intron | 25.0% |
| ! | TTTAGATATTGTTCAGATCA+AGG | - | chr8.2:66823856-66823875 | MS.gene069238:intron | 25.0% |
| ! | TTTATGTATTATCAACACCA+TGG | - | chr8.2:66822732-66822751 | MS.gene069238:intron | 25.0% |
| ! | TTTGAAGAAAATGGAATAAG+CGG | + | chr8.2:66826705-66826724 | None:intergenic | 25.0% |
| ! | TTTGATAAAATCAAAGCTCA+TGG | - | chr8.2:66826548-66826567 | MS.gene069238:intron | 25.0% |
| !! | AACACTTGATTTGAAGAAAA+TGG | + | chr8.2:66826714-66826733 | None:intergenic | 25.0% |
| !! | AACATGACTTTATTTGATTG+TGG | - | chr8.2:66825627-66825646 | MS.gene069238:CDS | 25.0% |
| !! | ATTCATAAGGCTAATTTTCA+AGG | - | chr8.2:66823808-66823827 | MS.gene069238:CDS | 25.0% |
| !! | CTTAATTTTATGTGCATTGT+TGG | - | chr8.2:66825365-66825384 | MS.gene069238:CDS | 25.0% |
| !! | TAAACTCAATTCAAGTTTGT+TGG | - | chr8.2:66825191-66825210 | MS.gene069238:intron | 25.0% |
| !! | TCGATTCAAAAGTATACTTT+CGG | + | chr8.2:66824094-66824113 | None:intergenic | 25.0% |
| !! | TGTATGATTTTTCCGTTATT+CGG | + | chr8.2:66826380-66826399 | None:intergenic | 25.0% |
| !! | TTTTAAATTATTAGCGGTGT+CGG | + | chr8.2:66825710-66825729 | None:intergenic | 25.0% |
| !!! | AAATTAGCCTTATGAATAAC+AGG | + | chr8.2:66823805-66823824 | None:intergenic | 25.0% |
| !!! | AAGTTGAATTTTGAGTTTGT+CGG | - | chr8.2:66825160-66825179 | MS.gene069238:intron | 25.0% |
| !!! | AATAAAGTCATGTTTGTTGT+TGG | + | chr8.2:66825621-66825640 | None:intergenic | 25.0% |
| !!! | ACTTGCACACTATTTTAAAA+AGG | + | chr8.2:66824388-66824407 | None:intergenic | 25.0% |
| !!! | ATTGATGAAAGGTTTTGATT+TGG | + | chr8.2:66823394-66823413 | None:intergenic | 25.0% |
| !!! | CACATTTTTTGCTTATAAGT+TGG | - | chr8.2:66824260-66824279 | MS.gene069238:intron | 25.0% |
| !!! | CTCAAATTATTTTATGTTGG+AGG | - | chr8.2:66824220-66824239 | MS.gene069238:CDS | 25.0% |
| !!! | CTCTTTTTCATATATGCAAT+GGG | + | chr8.2:66826754-66826773 | None:intergenic | 25.0% |
| !!! | GGTTTTTTAAAATATCAAGG+AGG | + | chr8.2:66824063-66824082 | None:intergenic | 25.0% |
| !!! | TATATATGTTGGTGTCATAT+CGG | - | chr8.2:66825752-66825771 | MS.gene069238:CDS | 25.0% |
| !!! | TATGGGTATTTTGATTTGTT+GGG | + | chr8.2:66823522-66823541 | None:intergenic | 25.0% |
| !!! | TCTCTTTTTCATATATGCAA+TGG | + | chr8.2:66826755-66826774 | None:intergenic | 25.0% |
| !!! | TCTTTAAGGATATTTTTCCA+TGG | + | chr8.2:66824730-66824749 | None:intergenic | 25.0% |
| !!! | TGCGGTTTTTTAAAATATCA+AGG | + | chr8.2:66824066-66824085 | None:intergenic | 25.0% |
| !!! | TTTTGAGAGACTATTTTTTG+TGG | - | chr8.2:66826624-66826643 | MS.gene069238:intron | 25.0% |
| AAAAGCTAATTCAACAAGAC+AGG | - | chr8.2:66826194-66826213 | MS.gene069238:intron | 30.0% | |
| AAAGTTAAAGGATCATATGG+AGG | + | chr8.2:66826156-66826175 | None:intergenic | 30.0% | |
| AACAAGACAGGTAGAAATTT+GGG | - | chr8.2:66826206-66826225 | MS.gene069238:intron | 30.0% | |
| AATTTGAAAAGATAAGAGCG+TGG | + | chr8.2:66824456-66824475 | None:intergenic | 30.0% | |
| ACAACACTAAACTAAGTGTT+TGG | - | chr8.2:66823080-66823099 | MS.gene069238:CDS | 30.0% | |
| ACATATCTTAAACTCTTCTG+GGG | - | chr8.2:66822364-66822383 | MS.gene069238:CDS | 30.0% | |
| ATACTTGAGATGGGTAAATA+TGG | + | chr8.2:66824176-66824195 | None:intergenic | 30.0% | |
| ATGCTACATCAAAAGATGAT+TGG | - | chr8.2:66824857-66824876 | MS.gene069238:intron | 30.0% | |
| ATGTAGCATTGCATTTCAAA+AGG | + | chr8.2:66824846-66824865 | None:intergenic | 30.0% | |
| ATTCTCTTTCGCCTAAATAT+CGG | - | chr8.2:66822892-66822911 | MS.gene069238:intron | 30.0% | |
| CAATATCTAAATAAAGGAGG+TGG | + | chr8.2:66823847-66823866 | None:intergenic | 30.0% | |
| CATACAAGAGGATTTAGATA+TGG | - | chr8.2:66825936-66825955 | MS.gene069238:intron | 30.0% | |
| GAGTGATTCAAAATTCTACT+CGG | + | chr8.2:66822871-66822890 | None:intergenic | 30.0% | |
| GTTACAAGAAATCAAGCTTA+GGG | - | chr8.2:66825015-66825034 | MS.gene069238:intron | 30.0% | |
| TAAAATGTGTTCCGGAAAAA+TGG | - | chr8.2:66825218-66825237 | MS.gene069238:intron | 30.0% | |
| TAATGCTAATAGTTACAACG+TGG | + | chr8.2:66823258-66823277 | None:intergenic | 30.0% | |
| TATGACATGATCATTGATCA+AGG | + | chr8.2:66823225-66823244 | None:intergenic | 30.0% | |
| TCAAACATAAGTTCCAAATC+AGG | + | chr8.2:66823769-66823788 | None:intergenic | 30.0% | |
| TCATAGTTCATTCACTCATT+TGG | - | chr8.2:66824130-66824149 | MS.gene069238:intron | 30.0% | |
| TTAAAATAGTGTGCAAGTGA+TGG | - | chr8.2:66824390-66824409 | MS.gene069238:CDS | 30.0% | |
| TTCAAAATTTCTTCGAGTCA+TGG | + | chr8.2:66822939-66822958 | None:intergenic | 30.0% | |
| TTCTCAACTACATCGTAAAA+TGG | - | chr8.2:66824020-66824039 | MS.gene069238:intron | 30.0% | |
| ! | ACAACATGGCATGATTTTAT+TGG | + | chr8.2:66824306-66824325 | None:intergenic | 30.0% |
| ! | AGATGTATGTGGAAAAGTAT+AGG | - | chr8.2:66823668-66823687 | MS.gene069238:CDS | 30.0% |
| ! | ATAGAGTACCTTATGCTTAT+TGG | - | chr8.2:66824785-66824804 | MS.gene069238:intron | 30.0% |
| ! | CAAGAGAACTATCAAGTTTT+TGG | - | chr8.2:66825076-66825095 | MS.gene069238:intron | 30.0% |
| ! | GTGCCTGATATGTAATTTTA+GGG | + | chr8.2:66825888-66825907 | None:intergenic | 30.0% |
| ! | TATTGTAACTTTAGCCTTCT+TGG | + | chr8.2:66822422-66822441 | None:intergenic | 30.0% |
| ! | TCCATGAAGATTTAAAACCA+TGG | - | chr8.2:66823566-66823585 | MS.gene069238:intron | 30.0% |
| ! | TCCCTTCTTTTATCTCTTTA+AGG | + | chr8.2:66824744-66824763 | None:intergenic | 30.0% |
| ! | TGTGCCTGATATGTAATTTT+AGG | + | chr8.2:66825889-66825908 | None:intergenic | 30.0% |
| ! | TGTTTATGTGGATTGATGAA+AGG | + | chr8.2:66823405-66823424 | None:intergenic | 30.0% |
| ! | TTGTTGGGTTATGTTTTGTA+GGG | + | chr8.2:66823507-66823526 | None:intergenic | 30.0% |
| ! | TTTAAGGTTGTTATTGTGGA+TGG | - | chr8.2:66823643-66823662 | MS.gene069238:CDS | 30.0% |
| ! | TTTGTTGGGTTATGTTTTGT+AGG | + | chr8.2:66823508-66823527 | None:intergenic | 30.0% |
| !! | CTTTGTGTTGTTTGTTTATG+TGG | + | chr8.2:66823417-66823436 | None:intergenic | 30.0% |
| !! | TCTTAAATTTGCTGTGGATT+GGG | - | chr8.2:66825561-66825580 | MS.gene069238:CDS | 30.0% |
| !! | TGGATTTCTTTTGTTGCTTA+TGG | - | chr8.2:66826865-66826884 | MS.gene069238:CDS | 30.0% |
| !! | TTTTTGCTTATAAGTTGGGA+GGG | - | chr8.2:66824265-66824284 | MS.gene069238:intron | 30.0% |
| !!! | GTATGGGTATTTTGATTTGT+TGG | + | chr8.2:66823523-66823542 | None:intergenic | 30.0% |
| !!! | TCCATGGTTTTAAATCTTCA+TGG | + | chr8.2:66823570-66823589 | None:intergenic | 30.0% |
| !!! | TGAAAGGTTTTGATTTGGAA+TGG | + | chr8.2:66823389-66823408 | None:intergenic | 30.0% |
| !!! | TGCCATGTTGTCATTTTATT+AGG | - | chr8.2:66824315-66824334 | MS.gene069238:intron | 30.0% |
| !!! | TGGCTTAGTTGTTACTTTTT+TGG | - | chr8.2:66826269-66826288 | MS.gene069238:intron | 30.0% |
| !!! | TTCTATGACTTTTTCATCAG+AGG | - | chr8.2:66825484-66825503 | MS.gene069238:CDS | 30.0% |
| !!! | TTTCTCAGTTTTTTCTCCAT+AGG | + | chr8.2:66823464-66823483 | None:intergenic | 30.0% |
| !!! | TTTTTTGCTTATAAGTTGGG+AGG | - | chr8.2:66824264-66824283 | MS.gene069238:intron | 30.0% |
| AAAGTATGAGGGACAAGTAT+GGG | + | chr8.2:66823539-66823558 | None:intergenic | 35.0% | |
| AAGAGATGTGTTCACTTTGT+GGG | - | chr8.2:66823705-66823724 | MS.gene069238:CDS | 35.0% | |
| ACAATATCTCCTACACAAGA+TGG | + | chr8.2:66823043-66823062 | None:intergenic | 35.0% | |
| ACAATGGCATGTGATGTAAT+TGG | - | chr8.2:66826060-66826079 | MS.gene069238:intron | 35.0% | |
| ACCATGGTAGAAAAATCATG+TGG | - | chr8.2:66822748-66822767 | MS.gene069238:intron | 35.0% | |
| AGATAGGCCTGTTATTCATA+AGG | - | chr8.2:66823795-66823814 | MS.gene069238:CDS | 35.0% | |
| AGCTAGCAAATTCATACAAG+AGG | - | chr8.2:66825924-66825943 | MS.gene069238:intron | 35.0% | |
| AGTACCTTATGCTTATTGGA+AGG | - | chr8.2:66824789-66824808 | MS.gene069238:intron | 35.0% | |
| ATATGTTTGTGTCATAGGAC+TGG | - | chr8.2:66824973-66824992 | MS.gene069238:intron | 35.0% | |
| ATTGGCCAATAGTGTTGTAA+TGG | + | chr8.2:66825517-66825536 | None:intergenic | 35.0% | |
| CAACAAGACAGGTAGAAATT+TGG | - | chr8.2:66826205-66826224 | MS.gene069238:intron | 35.0% | |
| CAATATCTCCTACACAAGAT+GGG | + | chr8.2:66823042-66823061 | None:intergenic | 35.0% | |
| CAATTATTGAGAATGTACCC+TGG | - | chr8.2:66823736-66823755 | MS.gene069238:CDS | 35.0% | |
| CAGAGACAAATATAAAGCCA+TGG | - | chr8.2:66824710-66824729 | MS.gene069238:intron | 35.0% | |
| CATAAATATTGGACACGACA+CGG | - | chr8.2:66825679-66825698 | MS.gene069238:CDS | 35.0% | |
| CTAGCTATGAAGCACAAATA+TGG | - | chr8.2:66825655-66825674 | MS.gene069238:CDS | 35.0% | |
| CTCCAACATATACTTGAGAT+GGG | + | chr8.2:66824185-66824204 | None:intergenic | 35.0% | |
| GGGTCTAACATATAATGTCA+TGG | + | chr8.2:66825461-66825480 | None:intergenic | 35.0% | |
| GGTTACAAGAAATCAAGCTT+AGG | - | chr8.2:66825014-66825033 | MS.gene069238:intron | 35.0% | |
| GTACCTTATGCTTATTGGAA+GGG | - | chr8.2:66824790-66824809 | MS.gene069238:intron | 35.0% | |
| GTAGCTAGCCATTTATGTAA+TGG | - | chr8.2:66824482-66824501 | MS.gene069238:CDS | 35.0% | |
| GTCTTAACTCTCCGATATTT+AGG | + | chr8.2:66822906-66822925 | None:intergenic | 35.0% | |
| GTGATGTAATTGGTACACAA+AGG | - | chr8.2:66826070-66826089 | MS.gene069238:intron | 35.0% | |
| GTGCATGGATTTAAATCACT+AGG | + | chr8.2:66826126-66826145 | None:intergenic | 35.0% | |
| TAAAACCATGGAGAGAGAAA+GGG | - | chr8.2:66823578-66823597 | MS.gene069238:intron | 35.0% | |
| TAAAGTATGAGGGACAAGTA+TGG | + | chr8.2:66823540-66823559 | None:intergenic | 35.0% | |
| TACACAAAGGAAATTCATGG+AGG | - | chr8.2:66826083-66826102 | MS.gene069238:intron | 35.0% | |
| TACCCATCTCAAGTATATGT+TGG | - | chr8.2:66824180-66824199 | MS.gene069238:intron | 35.0% | |
| TACCTTATGCTTATTGGAAG+GGG | - | chr8.2:66824791-66824810 | MS.gene069238:intron | 35.0% | |
| TATATTACCTATGGGTGCAT+TGG | + | chr8.2:66825043-66825062 | None:intergenic | 35.0% | |
| TATGTTTGTGTCATAGGACT+GGG | - | chr8.2:66824974-66824993 | MS.gene069238:intron | 35.0% | |
| TGATTTCTTGTAACCTTGAG+TGG | + | chr8.2:66825009-66825028 | None:intergenic | 35.0% | |
| TGCTGCAAAATCACAAAAAG+TGG | + | chr8.2:66822482-66822501 | None:intergenic | 35.0% | |
| TGGATCCATTACAACACTAT+TGG | - | chr8.2:66825509-66825528 | MS.gene069238:CDS | 35.0% | |
| TGGTACACAAAGGAAATTCA+TGG | - | chr8.2:66826080-66826099 | MS.gene069238:intron | 35.0% | |
| TTAAAACCATGGAGAGAGAA+AGG | - | chr8.2:66823577-66823596 | MS.gene069238:intron | 35.0% | |
| TTCAAACCAACTATACCTCA+AGG | - | chr8.2:66826015-66826034 | MS.gene069238:intron | 35.0% | |
| TTTATGTGCATTGTTGGAAC+AGG | - | chr8.2:66825371-66825390 | MS.gene069238:CDS | 35.0% | |
| ! | AAATTGAACCAAGGTGTTCT+TGG | + | chr8.2:66822810-66822829 | None:intergenic | 35.0% |
| ! | ACCACATGATTTTTCTACCA+TGG | + | chr8.2:66822752-66822771 | None:intergenic | 35.0% |
| ! | ATGGATCCATCTAAAGTATG+AGG | + | chr8.2:66823551-66823570 | None:intergenic | 35.0% |
| ! | CTTCAAATCAAGTGTTGCAT+TGG | - | chr8.2:66826718-66826737 | MS.gene069238:intron | 35.0% |
| ! | CTTTTTGTGATTTTGCAGCA+TGG | - | chr8.2:66822482-66822501 | MS.gene069238:intron | 35.0% |
| ! | GAAAATCTTGAAGGCTAGTT+TGG | - | chr8.2:66826775-66826794 | MS.gene069238:CDS | 35.0% |
| ! | TGGATCCATCTAAAGTATGA+GGG | + | chr8.2:66823550-66823569 | None:intergenic | 35.0% |
| ! | TTTATATAGAAGGATGGGCT+TGG | - | chr8.2:66825401-66825420 | MS.gene069238:CDS | 35.0% |
| ! | TTTTCCTCGCAATTCACAAA+AGG | - | chr8.2:66824932-66824951 | MS.gene069238:intron | 35.0% |
| !! | CACTTCTCTTAAATTTGCTG+TGG | - | chr8.2:66825555-66825574 | MS.gene069238:CDS | 35.0% |
| !! | CTCTTAAATTTGCTGTGGAT+TGG | - | chr8.2:66825560-66825579 | MS.gene069238:CDS | 35.0% |
| !! | CTTAAATTTGCTGTGGATTG+GGG | - | chr8.2:66825562-66825581 | MS.gene069238:CDS | 35.0% |
| !! | TTTTATGTTGGAGGTGCAAA+AGG | - | chr8.2:66824229-66824248 | MS.gene069238:CDS | 35.0% |
| AAATAGTGTGCAAGTGATGG+TGG | - | chr8.2:66824393-66824412 | MS.gene069238:CDS | 40.0% | |
| ACAAAACAAACCAACCACAG+TGG | + | chr8.2:66822452-66822471 | None:intergenic | 40.0% | |
| ACATATCAGGCACAAGCAAT+AGG | - | chr8.2:66825895-66825914 | MS.gene069238:intron | 40.0% | |
| AGAGATGTGTTCACTTTGTG+GGG | - | chr8.2:66823706-66823725 | MS.gene069238:CDS | 40.0% | |
| AGTATACTTTCGGACAAGTG+CGG | + | chr8.2:66824084-66824103 | None:intergenic | 40.0% | |
| ATATCAGGCACAAGCAATAG+GGG | - | chr8.2:66825897-66825916 | MS.gene069238:intron | 40.0% | |
| ATCACTAGGGAAATGTTGGA+GGG | - | chr8.2:66823601-66823620 | MS.gene069238:intron | 40.0% | |
| ATCTAGCAAGCTATGAAGCA+CGG | + | chr8.2:66825811-66825830 | None:intergenic | 40.0% | |
| CAAAAGAAATCCATCCCTGT+CGG | + | chr8.2:66826858-66826877 | None:intergenic | 40.0% | |
| CAAGAGATGTGTTCACTTTG+TGG | - | chr8.2:66823704-66823723 | MS.gene069238:CDS | 40.0% | |
| CATATCAGGCACAAGCAATA+GGG | - | chr8.2:66825896-66825915 | MS.gene069238:intron | 40.0% | |
| CCATCTCAAGTATATGTTGG+AGG | - | chr8.2:66824183-66824202 | MS.gene069238:intron | 40.0% | |
| CCTCCAACATATACTTGAGA+TGG | + | chr8.2:66824186-66824205 | None:intergenic | 40.0% | |
| CTTGTCCCTCATACTTTAGA+TGG | - | chr8.2:66823542-66823561 | MS.gene069238:intron | 40.0% | |
| GAAATTCATGGAGGAGTCAA+TGG | - | chr8.2:66826092-66826111 | MS.gene069238:intron | 40.0% | |
| GAGATGTTTCTTCACCAAGA+AGG | - | chr8.2:66822405-66822424 | MS.gene069238:CDS | 40.0% | |
| GGATGTTGAAGCATAGGATT+AGG | + | chr8.2:66823108-66823127 | None:intergenic | 40.0% | |
| GGGAAACAAACATGCTGATA+AGG | - | chr8.2:66825582-66825601 | MS.gene069238:CDS | 40.0% | |
| GTTAAAGGATCATATGGAGG+AGG | + | chr8.2:66826153-66826172 | None:intergenic | 40.0% | |
| TAGCATTTACCATCCCCAAA+AGG | + | chr8.2:66823911-66823930 | None:intergenic | 40.0% | |
| TCCTAGTTGCAGCAACATTA+GGG | + | chr8.2:66824819-66824838 | None:intergenic | 40.0% | |
| TGGATATTGTGTTCCCAGAT+TGG | - | chr8.2:66823884-66823903 | MS.gene069238:intron | 40.0% | |
| TGGGATAAAGAATCCACTCA+AGG | - | chr8.2:66824993-66825012 | MS.gene069238:intron | 40.0% | |
| TGTGGATGGAAAGATGTATG+TGG | - | chr8.2:66823657-66823676 | MS.gene069238:CDS | 40.0% | |
| TTCCCCTTCCAATAAGCATA+AGG | + | chr8.2:66824796-66824815 | None:intergenic | 40.0% | |
| TTCCTAGTTGCAGCAACATT+AGG | + | chr8.2:66824820-66824839 | None:intergenic | 40.0% | |
| TTGTTCAGATCAAGGGAGTT+TGG | - | chr8.2:66823864-66823883 | MS.gene069238:intron | 40.0% | |
| TTTCCACTTAGATGCACCTA+TGG | - | chr8.2:66823445-66823464 | MS.gene069238:intron | 40.0% | |
| ! | AAAGATAAGAGCGTGGAACT+TGG | + | chr8.2:66824449-66824468 | None:intergenic | 40.0% |
| ! | AACTTGGAGGGTATACTAGA+AGG | - | chr8.2:66826800-66826819 | MS.gene069238:CDS | 40.0% |
| ! | GGAGTTTTGCTCAGAAACAA+TGG | - | chr8.2:66826044-66826063 | MS.gene069238:intron | 40.0% |
| ! | TATCTTAAACTCTTCTGGGG+TGG | - | chr8.2:66822367-66822386 | MS.gene069238:CDS | 40.0% |
| ! | TCTTCCTTTTGTGAATTGCG+AGG | + | chr8.2:66824939-66824958 | None:intergenic | 40.0% |
| ! | TGTTTTGTAGGGTAGTCTCT+TGG | + | chr8.2:66823496-66823515 | None:intergenic | 40.0% |
| !!! | TGACTTTTTCATCAGAGGCA+TGG | - | chr8.2:66825489-66825508 | MS.gene069238:CDS | 40.0% |
| AAACAAACCAACCACAGTGG+TGG | + | chr8.2:66822449-66822468 | None:intergenic | 45.0% | |
| AACTATACCTCAAGGAGCTG+TGG | - | chr8.2:66826023-66826042 | MS.gene069238:intron | 45.0% | |
| AAGGGAACAAACAGACCAAG+TGG | - | chr8.2:66824758-66824777 | MS.gene069238:intron | 45.0% | |
| ACAGCTCCTTGAGGTATAGT+TGG | + | chr8.2:66826024-66826043 | None:intergenic | 45.0% | |
| ACCCTAATGTTGCTGCAACT+AGG | - | chr8.2:66824815-66824834 | MS.gene069238:intron | 45.0% | |
| AGGGATCACTAGGGAAATGT+TGG | - | chr8.2:66823597-66823616 | MS.gene069238:intron | 45.0% | |
| AGGTACTCTATCCTTCCACT+TGG | + | chr8.2:66824776-66824795 | None:intergenic | 45.0% | |
| ATCCCCAAAAGGACCAATCT+GGG | + | chr8.2:66823900-66823919 | None:intergenic | 45.0% | |
| GAACAAACAGACCAAGTGGA+AGG | - | chr8.2:66824762-66824781 | MS.gene069238:intron | 45.0% | |
| GAGAGAGAAAGGGATCACTA+GGG | - | chr8.2:66823588-66823607 | MS.gene069238:intron | 45.0% | |
| GATCACTAGGGAAATGTTGG+AGG | - | chr8.2:66823600-66823619 | MS.gene069238:intron | 45.0% | |
| GTGTTGGGATGTTGAAGCAT+AGG | + | chr8.2:66823114-66823133 | None:intergenic | 45.0% | |
| TACAATAGCTACCACCACTG+TGG | - | chr8.2:66822435-66822454 | MS.gene069238:CDS | 45.0% | |
| TATGAAGCACGGACACTCTT+TGG | + | chr8.2:66825800-66825819 | None:intergenic | 45.0% | |
| TATGGAGGAGGAATAGTGCA+TGG | + | chr8.2:66826141-66826160 | None:intergenic | 45.0% | |
| TCTCCATAGGTGCATCTAAG+TGG | + | chr8.2:66823451-66823470 | None:intergenic | 45.0% | |
| TTTGTGCACCCATCTTGTGT+AGG | - | chr8.2:66823031-66823050 | MS.gene069238:CDS | 45.0% | |
| ! | GCTAGTTTGGACAACTTGGA+GGG | - | chr8.2:66826788-66826807 | MS.gene069238:CDS | 45.0% |
| ! | GGACACTCTTTGGATTAGAC+AGG | + | chr8.2:66825790-66825809 | None:intergenic | 45.0% |
| ! | TGCTTATAAGTTGGGAGGGA+GGG | - | chr8.2:66824269-66824288 | MS.gene069238:intron | 45.0% |
| ! | TTGCTTATAAGTTGGGAGGG+AGG | - | chr8.2:66824268-66824287 | MS.gene069238:intron | 45.0% |
| !! | GAAGGCTAGTTTGGACAACT+TGG | - | chr8.2:66826784-66826803 | MS.gene069238:CDS | 45.0% |
| !! | GTTCCCAGATTGGTCCTTTT+GGG | - | chr8.2:66823894-66823913 | MS.gene069238:intron | 45.0% |
| !! | TGTTCCCAGATTGGTCCTTT+TGG | - | chr8.2:66823893-66823912 | MS.gene069238:intron | 45.0% |
| !! | TTCCCAGATTGGTCCTTTTG+GGG | - | chr8.2:66823895-66823914 | MS.gene069238:intron | 45.0% |
| !!! | TTATTTATAAATTTTCTTTA+TGG | - | chr8.2:66824605-66824624 | MS.gene069238:intron | 5.0% |
| AAAGGAGGTGGTGCAGCATT+TGG | + | chr8.2:66823835-66823854 | None:intergenic | 50.0% | |
| ATAGCTACCACCACTGTGGT+TGG | - | chr8.2:66822439-66822458 | MS.gene069238:intron | 50.0% | |
| CAAAACTCCACAGCTCCTTG+AGG | + | chr8.2:66826033-66826052 | None:intergenic | 50.0% | |
| CATCCCCAAAAGGACCAATC+TGG | + | chr8.2:66823901-66823920 | None:intergenic | 50.0% | |
| CATGGAGGAGTCAATGGTGA+AGG | - | chr8.2:66826098-66826117 | MS.gene069238:intron | 50.0% | |
| CCAAATCAGGCAACTTGCCA+GGG | + | chr8.2:66823756-66823775 | None:intergenic | 50.0% | |
| CGAATCGACCAAGAACACCT+TGG | - | chr8.2:66822799-66822818 | MS.gene069238:intron | 50.0% | |
| GGAGAGAGAAAGGGATCACT+AGG | - | chr8.2:66823587-66823606 | MS.gene069238:intron | 50.0% | |
| GTGATCCCTTTCTCTCTCCA+TGG | + | chr8.2:66823586-66823605 | None:intergenic | 50.0% | |
| TAGGGAACCAATGCACCCAT+AGG | - | chr8.2:66825033-66825052 | MS.gene069238:intron | 50.0% | |
| TCCAAATCAGGCAACTTGCC+AGG | + | chr8.2:66823757-66823776 | None:intergenic | 50.0% | |
| !! | CAGATTGGTCCTTTTGGGGA+TGG | - | chr8.2:66823899-66823918 | MS.gene069238:intron | 50.0% |
| !! | GGCTAGTTTGGACAACTTGG+AGG | - | chr8.2:66826787-66826806 | MS.gene069238:CDS | 50.0% |
| CCCTGGCAAGTTGCCTGATT+TGG | - | chr8.2:66823753-66823772 | MS.gene069238:CDS | 55.0% | |
| TCAGGCACAAGCAATAGGGG+AGG | - | chr8.2:66825900-66825919 | MS.gene069238:intron | 55.0% | |
| GACGATTGCGAAGCCTCCAC+CGG | - | chr8.2:66826827-66826846 | MS.gene069238:CDS | 60.0% | |
| TCCATCCCTGTCGGAGTTGC+CGG | + | chr8.2:66826849-66826868 | None:intergenic | 60.0% | |
| ACCGGCAACTCCGACAGGGA+TGG | - | chr8.2:66826845-66826864 | MS.gene069238:CDS | 65.0% | |
| ATCCCTGTCGGAGTTGCCGG+TGG | + | chr8.2:66826846-66826865 | None:intergenic | 65.0% | |
| CTCCACCGGCAACTCCGACA+GGG | - | chr8.2:66826841-66826860 | MS.gene069238:CDS | 65.0% | |
| CCTCCACCGGCAACTCCGAC+AGG | - | chr8.2:66826840-66826859 | MS.gene069238:CDS | 70.0% | |
| CCTGTCGGAGTTGCCGGTGG+AGG | + | chr8.2:66826843-66826862 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 66822346 | 66826898 | 66822346 | ID=MS.gene069238 |
| chr8.2 | mRNA | 66822346 | 66826898 | 66822346 | ID=MS.gene069238.t1;Parent=MS.gene069238 |
| chr8.2 | exon | 66826734 | 66826898 | 66826734 | ID=MS.gene069238.t1.exon1;Parent=MS.gene069238.t1 |
| chr8.2 | CDS | 66826734 | 66826898 | 66826734 | ID=cds.MS.gene069238.t1;Parent=MS.gene069238.t1 |
| chr8.2 | exon | 66825324 | 66825877 | 66825324 | ID=MS.gene069238.t1.exon2;Parent=MS.gene069238.t1 |
| chr8.2 | CDS | 66825324 | 66825877 | 66825324 | ID=cds.MS.gene069238.t1;Parent=MS.gene069238.t1 |
| chr8.2 | exon | 66824344 | 66824536 | 66824344 | ID=MS.gene069238.t1.exon3;Parent=MS.gene069238.t1 |
| chr8.2 | CDS | 66824344 | 66824536 | 66824344 | ID=cds.MS.gene069238.t1;Parent=MS.gene069238.t1 |
| chr8.2 | exon | 66824190 | 66824254 | 66824190 | ID=MS.gene069238.t1.exon4;Parent=MS.gene069238.t1 |
| chr8.2 | CDS | 66824190 | 66824254 | 66824190 | ID=cds.MS.gene069238.t1;Parent=MS.gene069238.t1 |
| chr8.2 | exon | 66823641 | 66823851 | 66823641 | ID=MS.gene069238.t1.exon5;Parent=MS.gene069238.t1 |
| chr8.2 | CDS | 66823641 | 66823851 | 66823641 | ID=cds.MS.gene069238.t1;Parent=MS.gene069238.t1 |
| chr8.2 | exon | 66823029 | 66823340 | 66823029 | ID=MS.gene069238.t1.exon6;Parent=MS.gene069238.t1 |
| chr8.2 | CDS | 66823029 | 66823340 | 66823029 | ID=cds.MS.gene069238.t1;Parent=MS.gene069238.t1 |
| chr8.2 | exon | 66822346 | 66822456 | 66822346 | ID=MS.gene069238.t1.exon7;Parent=MS.gene069238.t1 |
| chr8.2 | CDS | 66822346 | 66822456 | 66822346 | ID=cds.MS.gene069238.t1;Parent=MS.gene069238.t1 |
| Gene Sequence |
| Protein sequence |
