Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049567.t1 | XP_024635249.1 | 84.5 | 573 | 66 | 2 | 1 | 551 | 1 | 572 | 7.30E-275 | 956.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049567.t1 | Q4F883 | 36.0 | 556 | 288 | 20 | 10 | 535 | 9 | 526 | 1.3e-75 | 285.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049567.t1 | A0A072V8I6 | 84.0 | 576 | 66 | 2 | 1 | 551 | 1 | 575 | 1.2e-274 | 954.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene049567 | 0.829993 | 3.77E-55 | -1.69E-46 |
| MS.gene049567 | MS.gene050355 | 0.81541 | 9.38E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene050559 | 0.800927 | 1.15E-48 | -1.69E-46 |
| MS.gene049567 | MS.gene050561 | 0.80188 | 7.31E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene050780 | 0.804384 | 2.22E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene051492 | 0.831184 | 1.93E-55 | -1.69E-46 |
| MS.gene049567 | MS.gene051744 | 0.852933 | 3.33E-61 | -1.69E-46 |
| MS.gene049567 | MS.gene052685 | 0.809135 | 2.20E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene053094 | 0.802592 | 5.21E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene053643 | 0.81722 | 3.69E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene053647 | 0.81696 | 4.22E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene05410 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene049567 | MS.gene05414 | 0.812484 | 4.14E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene054291 | -0.809671 | 1.69E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene054576 | 0.832345 | 9.97E-56 | -1.69E-46 |
| MS.gene049567 | MS.gene054968 | 0.801136 | 1.04E-48 | -1.69E-46 |
| MS.gene049567 | MS.gene055586 | 0.818201 | 2.22E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene055589 | 0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene056779 | 0.807746 | 4.35E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene057026 | 0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene058037 | 0.80126 | 9.79E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene058477 | 0.843737 | 1.17E-58 | -1.69E-46 |
| MS.gene049567 | MS.gene059774 | 0.819919 | 9.02E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene060697 | 0.816555 | 5.21E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene06319 | 0.821654 | 3.60E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene06372 | 0.817135 | 3.86E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene06539 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene065949 | 0.815094 | 1.10E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene066405 | 0.802127 | 6.50E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene066436 | 0.804474 | 2.12E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene066513 | 0.807643 | 4.57E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene067208 | 0.816176 | 6.33E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene069238 | 0.82788 | 1.23E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene070275 | 0.800041 | 1.74E-48 | -1.69E-46 |
| MS.gene049567 | MS.gene070301 | 0.82227 | 2.59E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene070818 | 0.807459 | 5.00E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene071551 | 0.857049 | 2.13E-62 | -1.69E-46 |
| MS.gene049567 | MS.gene072098 | 0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene073008 | 0.804756 | 1.85E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene073306 | 0.803357 | 3.62E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene073428 | 0.849248 | 3.65E-60 | -1.69E-46 |
| MS.gene049567 | MS.gene07344 | 0.809673 | 1.68E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene074100 | 0.815683 | 8.15E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene07815 | 0.836272 | 1.03E-56 | -1.69E-46 |
| MS.gene049567 | MS.gene09417 | 0.815833 | 7.55E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene25151 | 0.808247 | 3.40E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene25215 | 0.803038 | 4.22E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene25755 | 0.826362 | 2.83E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene27084 | 0.825621 | 4.24E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene28156 | 0.817556 | 3.10E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene28461 | 0.836082 | 1.15E-56 | -1.69E-46 |
| MS.gene049567 | MS.gene28498 | 0.802776 | 4.78E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene28798 | 0.827581 | 1.45E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene28904 | 0.803242 | 3.83E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene29428 | 0.805909 | 1.06E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene31142 | 0.807984 | 3.87E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene31283 | 0.828716 | 7.70E-55 | -1.69E-46 |
| MS.gene049567 | MS.gene32231 | 0.818154 | 2.27E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene32556 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene32801 | 0.806883 | 6.63E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene32874 | 0.810307 | 1.23E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene33109 | 0.844238 | 8.55E-59 | -1.69E-46 |
| MS.gene049567 | MS.gene33131 | 0.840492 | 8.42E-58 | -1.69E-46 |
| MS.gene049567 | MS.gene33651 | 0.818053 | 2.40E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene33853 | 0.809881 | 1.52E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene34444 | 0.806847 | 6.74E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene34667 | 0.805393 | 1.36E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene36151 | 0.818431 | 1.97E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene37612 | 0.806149 | 9.46E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene38123 | 0.822566 | 2.21E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene40121 | 0.850774 | 1.37E-60 | -1.69E-46 |
| MS.gene049567 | MS.gene40123 | 0.859146 | 5.06E-63 | -1.69E-46 |
| MS.gene049567 | MS.gene40709 | 0.819216 | 1.30E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene40711 | 0.807195 | 5.69E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene41464 | 0.911172 | 8.21E-83 | -1.69E-46 |
| MS.gene049567 | MS.gene41472 | 0.808731 | 2.68E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene41610 | 0.824584 | 7.46E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene43372 | 0.805951 | 1.04E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene44986 | 0.806877 | 6.64E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene45507 | 0.801402 | 9.16E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene46139 | 0.828925 | 6.86E-55 | -1.69E-46 |
| MS.gene049567 | MS.gene47134 | 0.803327 | 3.67E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene49468 | 0.820066 | 8.35E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene50031 | 0.815911 | 7.25E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene51538 | 0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene049567 | MS.gene52061 | 0.811021 | 8.62E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene52130 | 0.803672 | 3.12E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene53447 | 0.809111 | 2.22E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene53704 | 0.824087 | 9.76E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene54110 | 0.851078 | 1.12E-60 | -1.69E-46 |
| MS.gene049567 | MS.gene54686 | 0.802643 | 5.09E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene54703 | 0.800012 | 1.76E-48 | -1.69E-46 |
| MS.gene049567 | MS.gene54883 | 0.821896 | 3.16E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene54884 | 0.81544 | 9.23E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene58358 | 0.819576 | 1.08E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene58468 | 0.806352 | 8.58E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene58547 | 0.837199 | 5.99E-57 | -1.69E-46 |
| MS.gene049567 | MS.gene58653 | 0.834754 | 2.50E-56 | -1.69E-46 |
| MS.gene049567 | MS.gene58802 | 0.833342 | 5.63E-56 | -1.69E-46 |
| MS.gene049567 | MS.gene61162 | 0.812414 | 4.29E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene64023 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene64024 | 0.814662 | 1.37E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene64225 | 0.815197 | 1.05E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene64645 | 0.812736 | 3.65E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene64670 | 0.803744 | 3.01E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene65673 | 0.816617 | 5.04E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene70515 | 0.801226 | 9.95E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene71440 | 0.826629 | 2.44E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene71879 | 0.826738 | 2.30E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene72149 | 0.803296 | 3.73E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene74452 | 0.80239 | 5.74E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene75206 | 0.803622 | 3.19E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene75963 | 0.802245 | 6.15E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene76148 | 0.835421 | 1.69E-56 | -1.69E-46 |
| MS.gene049567 | MS.gene76244 | 0.823323 | 1.47E-53 | -1.69E-46 |
| MS.gene049567 | MS.gene76356 | 0.804822 | 1.80E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene77588 | 0.806196 | 9.25E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene78642 | 0.808954 | 2.40E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene80853 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene84454 | 0.833676 | 4.65E-56 | -1.69E-46 |
| MS.gene049567 | MS.gene84636 | 0.815046 | 1.13E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene85287 | 0.801354 | 9.37E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene87673 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene049567 | MS.gene88171 | 0.8119 | 5.56E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene89277 | 0.814606 | 1.41E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene90823 | 0.812813 | 3.51E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene92364 | 0.807795 | 4.24E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene94244 | 0.817538 | 3.13E-52 | -1.69E-46 |
| MS.gene049567 | MS.gene97344 | 0.831195 | 1.92E-55 | -1.69E-46 |
| MS.gene049567 | MS.gene98848 | 0.814458 | 1.52E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene99849 | 0.802515 | 5.41E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049567.t1 | MTR_3g467360 | 84.028 | 576 | 66 | 2 | 1 | 551 | 1 | 575 | 0.0 | 988 |
| MS.gene049567.t1 | MTR_3g467360 | 83.860 | 570 | 66 | 2 | 7 | 551 | 13 | 581 | 0.0 | 977 |
| MS.gene049567.t1 | MTR_6g007975 | 64.471 | 577 | 169 | 8 | 5 | 551 | 7 | 577 | 0.0 | 715 |
| MS.gene049567.t1 | MTR_6g008015 | 60.727 | 578 | 190 | 7 | 5 | 551 | 7 | 578 | 0.0 | 677 |
| MS.gene049567.t1 | MTR_6g008055 | 59.391 | 591 | 184 | 13 | 1 | 551 | 1 | 575 | 0.0 | 645 |
| MS.gene049567.t1 | MTR_6g007980 | 55.137 | 584 | 219 | 11 | 1 | 550 | 1 | 575 | 0.0 | 592 |
| MS.gene049567.t1 | MTR_6g007980 | 55.043 | 585 | 219 | 11 | 1 | 550 | 1 | 576 | 0.0 | 591 |
| MS.gene049567.t1 | MTR_6g007980 | 54.949 | 586 | 219 | 11 | 1 | 550 | 1 | 577 | 0.0 | 590 |
| MS.gene049567.t1 | MTR_6g007985 | 61.354 | 458 | 146 | 4 | 120 | 551 | 49 | 501 | 0.0 | 561 |
| MS.gene049567.t1 | MTR_3g467350 | 55.044 | 565 | 157 | 13 | 1 | 551 | 1 | 482 | 0.0 | 530 |
| MS.gene049567.t1 | MTR_0286s0040 | 54.130 | 460 | 109 | 9 | 120 | 551 | 2 | 387 | 1.72e-153 | 445 |
| MS.gene049567.t1 | MTR_0286s0050 | 57.851 | 121 | 45 | 3 | 5 | 120 | 7 | 126 | 4.63e-32 | 121 |
| MS.gene049567.t1 | MTR_3g078633 | 27.324 | 355 | 179 | 18 | 209 | 515 | 276 | 599 | 8.44e-22 | 99.8 |
| MS.gene049567.t1 | MTR_3g078633 | 27.324 | 355 | 179 | 18 | 209 | 515 | 204 | 527 | 9.42e-22 | 99.4 |
| MS.gene049567.t1 | MTR_3g079340 | 24.198 | 343 | 202 | 12 | 209 | 515 | 277 | 597 | 2.48e-18 | 89.0 |
| MS.gene049567.t1 | MTR_8g494200 | 23.446 | 354 | 213 | 12 | 211 | 522 | 274 | 611 | 6.07e-18 | 87.8 |
| MS.gene049567.t1 | MTR_8g494200 | 36.842 | 133 | 66 | 5 | 94 | 209 | 84 | 215 | 2.27e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049567.t1 | AT5G14930 | 35.893 | 560 | 283 | 20 | 10 | 535 | 9 | 526 | 3.11e-91 | 290 |
| MS.gene049567.t1 | AT3G52430 | 24.471 | 425 | 273 | 12 | 130 | 522 | 112 | 520 | 2.88e-30 | 125 |
| MS.gene049567.t1 | AT5G14930 | 36.681 | 229 | 118 | 7 | 10 | 223 | 9 | 225 | 3.08e-29 | 116 |
| MS.gene049567.t1 | AT3G48080 | 26.184 | 359 | 195 | 17 | 209 | 516 | 265 | 604 | 1.20e-13 | 74.3 |
Find 93 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATGTCATTCAATTTCT+TGG | 0.175279 | 3.2:+58181295 | None:intergenic |
| GAATTTGAGGAGTATGTTTA+TGG | 0.181755 | 3.2:-58180765 | MS.gene049567:CDS |
| ACCACCTTCACTATAGTATT+TGG | 0.184967 | 3.2:+58181019 | None:intergenic |
| CCATATCTCGTAGTTCTATT+TGG | 0.220425 | 3.2:-58181944 | MS.gene049567:CDS |
| TGACTATAGATTCTTGCTTT+TGG | 0.226808 | 3.2:-58180869 | MS.gene049567:CDS |
| ACAGTTGGAGGAGTGGTTAT+TGG | 0.276000 | 3.2:-58180958 | MS.gene049567:CDS |
| AAAGAAATTGTTAGAATTTG+AGG | 0.296622 | 3.2:-58180778 | MS.gene049567:CDS |
| GAACTTGAATCTGTTGGTTA+TGG | 0.310006 | 3.2:-58181735 | MS.gene049567:CDS |
| ACCAGTACCTACATGCCTTT+TGG | 0.310304 | 3.2:-58181855 | MS.gene049567:CDS |
| ATATCAGTTGCTAGTGAATC+TGG | 0.321829 | 3.2:+58181639 | None:intergenic |
| GATTTCTTCTTCTGAACTTA+AGG | 0.324062 | 3.2:-58182903 | MS.gene049567:CDS |
| TTTCGTACCCGTTGGTTATA+TGG | 0.328618 | 3.2:-58181083 | MS.gene049567:CDS |
| TGGAAACTTGATAAAGAAAC+TGG | 0.339523 | 3.2:-58182992 | MS.gene049567:CDS |
| GTCCTATTAAGAGAGAAAAT+TGG | 0.343365 | 3.2:+58182836 | None:intergenic |
| AGAATTTCCAAGATAGAATC+TGG | 0.347744 | 3.2:+58181792 | None:intergenic |
| AAAGCTGCACCTTCTCTTTG+TGG | 0.372497 | 3.2:+58181104 | None:intergenic |
| CCAAATAGAACTACGAGATA+TGG | 0.376458 | 3.2:+58181944 | None:intergenic |
| AAGATGGTGTTGGAATTTCT+TGG | 0.381057 | 3.2:-58183012 | MS.gene049567:CDS |
| AGTGTCCCCTGAGATATTTC+TGG | 0.390259 | 3.2:-58180724 | MS.gene049567:CDS |
| CTACCATCCTTTGCAAATCA+TGG | 0.394861 | 3.2:-58183060 | MS.gene049567:CDS |
| ATTGTTACCGGACATGGTCT+TGG | 0.397281 | 3.2:-58182086 | MS.gene049567:CDS |
| CGGACTGCGTTGATTGTTAC+CGG | 0.398698 | 3.2:-58182098 | MS.gene049567:CDS |
| TGAGAATCCAGATTCTATCT+TGG | 0.409998 | 3.2:-58181799 | MS.gene049567:CDS |
| CACTATTTACTGGGAAAAGA+TGG | 0.411799 | 3.2:-58181147 | MS.gene049567:CDS |
| AATTTGAGGAGTATGTTTAT+GGG | 0.417132 | 3.2:-58180764 | MS.gene049567:CDS |
| AAGATTAAACAGTATGCTAT+AGG | 0.429849 | 3.2:-58180606 | MS.gene049567:CDS |
| ATGTCATTCAATTTCTTGGA+TGG | 0.433231 | 3.2:+58181299 | None:intergenic |
| CCAACAGCATCATGGTCAAT+TGG | 0.440770 | 3.2:+58181185 | None:intergenic |
| CGTCCACTCTGCATCACCTT+CGG | 0.442679 | 3.2:-58182002 | MS.gene049567:CDS |
| GTCTGAACATTTCAAACAGT+TGG | 0.451266 | 3.2:-58180973 | MS.gene049567:CDS |
| CTTCGTGCCAGAAATATCTC+AGG | 0.453015 | 3.2:+58180717 | None:intergenic |
| AACTGATATCAGTTTGCAGT+TGG | 0.454655 | 3.2:-58181625 | MS.gene049567:CDS |
| GTTCACCGCTTGTTGGTGAC+AGG | 0.456852 | 3.2:-58181980 | MS.gene049567:CDS |
| ACTGATATCAGTTTGCAGTT+GGG | 0.461531 | 3.2:-58181624 | MS.gene049567:CDS |
| CTGATATCAGTTTGCAGTTG+GGG | 0.462079 | 3.2:-58181623 | MS.gene049567:CDS |
| TGATCCTCCAAGACCATGTC+CGG | 0.476263 | 3.2:+58182079 | None:intergenic |
| ACCTTCGGTTCACCGCTTGT+TGG | 0.478504 | 3.2:-58181987 | MS.gene049567:CDS |
| GCGTTGATTGTTACCGGACA+TGG | 0.479138 | 3.2:-58182092 | MS.gene049567:CDS |
| AATCAAATCAGCTTGAACAT+TGG | 0.479409 | 3.2:+58182922 | None:intergenic |
| AAAGAAGAACTTGAATCTGT+TGG | 0.489615 | 3.2:-58181741 | MS.gene049567:CDS |
| CTTGGAAATTCTCGTGGCGT+TGG | 0.490276 | 3.2:-58181781 | MS.gene049567:CDS |
| CAAGTTCTTCTTTCTTATCG+TGG | 0.503646 | 3.2:+58181751 | None:intergenic |
| AAAACTAAGAATGAAAATGC+AGG | 0.513971 | 3.2:-58181239 | MS.gene049567:CDS |
| AAGACTATGTTAATAACAAA+CGG | 0.514980 | 3.2:-58180995 | MS.gene049567:CDS |
| CACATGATGAATGTTCCAAA+AGG | 0.519064 | 3.2:+58181840 | None:intergenic |
| TCCAAAAGGCATGTAGGTAC+TGG | 0.521347 | 3.2:+58181854 | None:intergenic |
| GTTACCGGACATGGTCTTGG+AGG | 0.521601 | 3.2:-58182083 | MS.gene049567:CDS |
| TACATACGGCCCAACTTGAA+TGG | 0.525478 | 3.2:-58181271 | MS.gene049567:CDS |
| CTTCCATGATTTGCAAAGGA+TGG | 0.526288 | 3.2:+58183057 | None:intergenic |
| CGTACCCGTTGGTTATATGG+AGG | 0.529527 | 3.2:-58181080 | MS.gene049567:CDS |
| CAGCATCATGGTCAATTGGT+TGG | 0.530941 | 3.2:+58181189 | None:intergenic |
| AATCAACGCAGTCCGTGGAT+TGG | 0.532802 | 3.2:+58182106 | None:intergenic |
| CAATTGACCATGATGCTGTT+GGG | 0.534264 | 3.2:-58181184 | MS.gene049567:CDS |
| TATGGAACCCAACAGCATCA+TGG | 0.536170 | 3.2:+58181177 | None:intergenic |
| AAGTTTGACACCACGTATGC+AGG | 0.536402 | 3.2:-58181595 | MS.gene049567:intron |
| TTCTTCTTCTGAACTTAAGG+AGG | 0.539287 | 3.2:-58182900 | MS.gene049567:CDS |
| CAAGAAATTGAATGACATGA+AGG | 0.541822 | 3.2:-58181294 | MS.gene049567:CDS |
| AGTCCCTCCATATAACCAAC+GGG | 0.547594 | 3.2:+58181076 | None:intergenic |
| ATATCACTGTTACATAACAT+TGG | 0.550190 | 3.2:-58182038 | MS.gene049567:CDS |
| TGAACATTTCAAACAGTTGG+AGG | 0.555656 | 3.2:-58180970 | MS.gene049567:CDS |
| CGATCTGTAATGAAGAGCAT+TGG | 0.559759 | 3.2:+58181879 | None:intergenic |
| GCCAAATACTATAGTGAAGG+TGG | 0.562312 | 3.2:-58181020 | MS.gene049567:CDS |
| GTAACAATCAACGCAGTCCG+TGG | 0.565263 | 3.2:+58182101 | None:intergenic |
| ATTTCAAACAGTTGGAGGAG+TGG | 0.565495 | 3.2:-58180965 | MS.gene049567:CDS |
| GTATGTTTATGGGTTGCTCA+AGG | 0.569328 | 3.2:-58180754 | MS.gene049567:CDS |
| TTCTATCTTGGAAATTCTCG+TGG | 0.570429 | 3.2:-58181787 | MS.gene049567:CDS |
| ATCTCTATCGTAAAGCAACA+TGG | 0.570450 | 3.2:-58181698 | MS.gene049567:CDS |
| CCAATTGACCATGATGCTGT+TGG | 0.574111 | 3.2:-58181185 | MS.gene049567:CDS |
| TAGTCTTCCATGATTTGCAA+AGG | 0.577101 | 3.2:+58183053 | None:intergenic |
| AGGGACTACTTACAGAAGAA+TGG | 0.577212 | 3.2:-58181060 | MS.gene049567:CDS |
| GTACCCGTTGGTTATATGGA+GGG | 0.577415 | 3.2:-58181079 | MS.gene049567:CDS |
| ACCAACAAGCGGTGAACCGA+AGG | 0.585729 | 3.2:+58181986 | None:intergenic |
| GTAATGAAGAGCATTGGAAG+TGG | 0.587689 | 3.2:+58181885 | None:intergenic |
| GAATGACATGAAGGTACATA+CGG | 0.588927 | 3.2:-58181285 | MS.gene049567:CDS |
| GAATGTTCCAAAAGGCATGT+AGG | 0.591885 | 3.2:+58181848 | None:intergenic |
| CACGAAGTAGCTACATTCGT+TGG | 0.601103 | 3.2:-58180701 | MS.gene049567:CDS |
| AAACTAAGAATGAAAATGCA+GGG | 0.601227 | 3.2:-58181238 | MS.gene049567:CDS |
| TAGCACACACAGCAAGAATG+TGG | 0.601389 | 3.2:-58180901 | MS.gene049567:CDS |
| TAGTATTTGGCAATAGCTAG+TGG | 0.602435 | 3.2:+58181032 | None:intergenic |
| GAGATGAAGCCACAAAGAGA+AGG | 0.602952 | 3.2:-58181113 | MS.gene049567:CDS |
| TTCGTGCCAGAAATATCTCA+GGG | 0.611265 | 3.2:+58180718 | None:intergenic |
| GAAGTAGCTACATTCGTTGG+TGG | 0.612152 | 3.2:-58180698 | MS.gene049567:CDS |
| TAGTCCCTCCATATAACCAA+CGG | 0.612991 | 3.2:+58181075 | None:intergenic |
| ATTGCCAAATACTATAGTGA+AGG | 0.613573 | 3.2:-58181023 | MS.gene049567:CDS |
| TTCTTTCTTATCGTGGACTG+AGG | 0.617095 | 3.2:+58181758 | None:intergenic |
| TAATGAAGAGCATTGGAAGT+GGG | 0.624740 | 3.2:+58181886 | None:intergenic |
| TGATATCAGTTTGCAGTTGG+GGG | 0.634885 | 3.2:-58181622 | MS.gene049567:CDS |
| TATTCACCTACCTGCATACG+TGG | 0.651228 | 3.2:+58181585 | None:intergenic |
| GAACCGAAGGTGATGCAGAG+TGG | 0.652177 | 3.2:+58181999 | None:intergenic |
| AATCTCCTGTCACCAACAAG+CGG | 0.657865 | 3.2:+58181975 | None:intergenic |
| AGATTAATAGTTCCAATCCA+CGG | 0.668034 | 3.2:-58182118 | MS.gene049567:CDS |
| ACTAGAGAAGTTGAAAACTG+AGG | 0.701081 | 3.2:-58182780 | MS.gene049567:intron |
| TCGTGCCAGAAATATCTCAG+GGG | 0.781520 | 3.2:+58180719 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAGTATAAAAAAATTAA+GGG | - | chr3.2:58183162-58183181 | MS.gene049567:intron | 10.0% |
| !! | AAAAACTAAAATAGAAAGAA+AGG | + | chr3.2:58180650-58180669 | None:intergenic | 15.0% |
| !! | GAATGAGTATAAAAAAATTA+AGG | - | chr3.2:58183161-58183180 | MS.gene049567:intron | 15.0% |
| !! | TAACTTATGAATATTATTGA+TGG | - | chr3.2:58180695-58180714 | MS.gene049567:CDS | 15.0% |
| !! | AAAGAAATTGTTAGAATTTG+AGG | - | chr3.2:58183059-58183078 | MS.gene049567:CDS | 20.0% |
| !! | AAGACTATGTTAATAACAAA+CGG | - | chr3.2:58182842-58182861 | MS.gene049567:CDS | 20.0% |
| !! | ACAAGTAAATGTTAGAAATA+AGG | + | chr3.2:58182493-58182512 | None:intergenic | 20.0% |
| !! | AGTGAATTATAAAAAAAGAG+AGG | - | chr3.2:58182392-58182411 | MS.gene049567:intron | 20.0% |
| !! | ATAAAAAACTCACTATTTAC+TGG | - | chr3.2:58182680-58182699 | MS.gene049567:intron | 20.0% |
| !! | ATAATCATCTAATACTGAAT+AGG | - | chr3.2:58182305-58182324 | MS.gene049567:intron | 20.0% |
| !! | ATCAGACAAATAATCAAAAA+AGG | + | chr3.2:58181099-58181118 | None:intergenic | 20.0% |
| !! | TAAAAAACTCACTATTTACT+GGG | - | chr3.2:58182681-58182700 | MS.gene049567:intron | 20.0% |
| !! | TGAATAAATATTGTACAGTA+TGG | + | chr3.2:58181585-58181604 | None:intergenic | 20.0% |
| !!! | AGTAAATAGTGAGTTTTTTA+TGG | + | chr3.2:58182681-58182700 | None:intergenic | 20.0% |
| !!! | TTTTACAATTCTAGCTTTTA+AGG | - | chr3.2:58180874-58180893 | MS.gene049567:CDS | 20.0% |
| !!! | TTTTTTTATAATTCACTGTG+AGG | + | chr3.2:58182389-58182408 | None:intergenic | 20.0% |
| ! | AAAACTAAGAATGAAAATGC+AGG | - | chr3.2:58182598-58182617 | MS.gene049567:intron | 25.0% |
| ! | AAACTAAGAATGAAAATGCA+GGG | - | chr3.2:58182599-58182618 | MS.gene049567:intron | 25.0% |
| ! | AACACAAAAACTCAAAATGA+AGG | + | chr3.2:58180970-58180989 | None:intergenic | 25.0% |
| ! | AAGATTAAACAGTATGCTAT+AGG | - | chr3.2:58183231-58183250 | MS.gene049567:intron | 25.0% |
| ! | AATAAGCTGTTTATCCAAAT+AGG | - | chr3.2:58181375-58181394 | MS.gene049567:intron | 25.0% |
| ! | ATAAGCTGTTTATCCAAATA+GGG | - | chr3.2:58181376-58181395 | MS.gene049567:intron | 25.0% |
| ! | ATATCACTGTTACATAACAT+TGG | - | chr3.2:58181799-58181818 | MS.gene049567:CDS | 25.0% |
| ! | GAAATAAGGTCATGAAAAAT+TGG | + | chr3.2:58182479-58182498 | None:intergenic | 25.0% |
| ! | TAGCATATGAAAACAACTTA+TGG | - | chr3.2:58181334-58181353 | MS.gene049567:intron | 25.0% |
| ! | TCATATCGTACTATGTATAT+AGG | - | chr3.2:58181637-58181656 | MS.gene049567:CDS | 25.0% |
| ! | TGAACTATTAAGTATGTCTT+AGG | - | chr3.2:58181203-58181222 | MS.gene049567:CDS | 25.0% |
| !! | AATATGTTGTTTATCCAAAC+AGG | + | chr3.2:58181441-58181460 | None:intergenic | 25.0% |
| !! | AATTTGAGGAGTATGTTTAT+GGG | - | chr3.2:58183073-58183092 | MS.gene049567:CDS | 25.0% |
| !! | ATATGTTGTTTATCCAAACA+GGG | + | chr3.2:58181440-58181459 | None:intergenic | 25.0% |
| !! | TTCCAATTTTCTCTCTTAAT+AGG | - | chr3.2:58180999-58181018 | MS.gene049567:CDS | 25.0% |
| AAAGAAGAACTTGAATCTGT+TGG | - | chr3.2:58182096-58182115 | MS.gene049567:CDS | 30.0% | |
| AATCAAATCAGCTTGAACAT+TGG | + | chr3.2:58180918-58180937 | None:intergenic | 30.0% | |
| AGAATTTCCAAGATAGAATC+TGG | + | chr3.2:58182048-58182067 | None:intergenic | 30.0% | |
| AGATTAATAGTTCCAATCCA+CGG | - | chr3.2:58181719-58181738 | MS.gene049567:CDS | 30.0% | |
| ATCTGATATCATACCCTATT+TGG | + | chr3.2:58181392-58181411 | None:intergenic | 30.0% | |
| ATGTCATTCAATTTCTTGGA+TGG | + | chr3.2:58182541-58182560 | None:intergenic | 30.0% | |
| ATTGCCAAATACTATAGTGA+AGG | - | chr3.2:58182814-58182833 | MS.gene049567:CDS | 30.0% | |
| ATTGTTTCATAAGTGATTGC+AGG | + | chr3.2:58181691-58181710 | None:intergenic | 30.0% | |
| CAAACTCTAGTCAAAAAGAA+AGG | + | chr3.2:58181159-58181178 | None:intergenic | 30.0% | |
| CAAGAAATTGAATGACATGA+AGG | - | chr3.2:58182543-58182562 | MS.gene049567:intron | 30.0% | |
| CTTCATGTCATTCAATTTCT+TGG | + | chr3.2:58182545-58182564 | None:intergenic | 30.0% | |
| GATTTCTTCTTCTGAACTTA+AGG | - | chr3.2:58180934-58180953 | MS.gene049567:CDS | 30.0% | |
| GTCCTATTAAGAGAGAAAAT+TGG | + | chr3.2:58181004-58181023 | None:intergenic | 30.0% | |
| TACATAGTACGATATGAGTA+CGG | + | chr3.2:58181634-58181653 | None:intergenic | 30.0% | |
| TAGAGTTTGATGTGTAGATT+TGG | - | chr3.2:58181170-58181189 | MS.gene049567:CDS | 30.0% | |
| TGGAAACTTGATAAAGAAAC+TGG | - | chr3.2:58180845-58180864 | MS.gene049567:CDS | 30.0% | |
| TGGATAAACAACATATTCTG+TGG | - | chr3.2:58181444-58181463 | MS.gene049567:intron | 30.0% | |
| TTGTTTCATAAGTGATTGCA+GGG | + | chr3.2:58181690-58181709 | None:intergenic | 30.0% | |
| ! | GAATTTGAGGAGTATGTTTA+TGG | - | chr3.2:58183072-58183091 | MS.gene049567:CDS | 30.0% |
| ! | TCTTTTTGTACCATTCAAGT+TGG | + | chr3.2:58182579-58182598 | None:intergenic | 30.0% |
| ! | TGACTATAGATTCTTGCTTT+TGG | - | chr3.2:58182968-58182987 | MS.gene049567:CDS | 30.0% |
| !! | CTTTTTGTACCATTCAAGTT+GGG | + | chr3.2:58182578-58182597 | None:intergenic | 30.0% |
| !! | GACTATAGATTCTTGCTTTT+GGG | - | chr3.2:58182969-58182988 | MS.gene049567:CDS | 30.0% |
| !!! | GGATAAACAGCTTATTTTGA+AGG | + | chr3.2:58181371-58181390 | None:intergenic | 30.0% |
| !!! | TCATCTGATAGTTTTGAAGA+TGG | - | chr3.2:58180809-58180828 | MS.gene049567:CDS | 30.0% |
| AACTGATATCAGTTTGCAGT+TGG | - | chr3.2:58182212-58182231 | MS.gene049567:intron | 35.0% | |
| AATAAGTCATGCATGGCATA+TGG | + | chr3.2:58180627-58180646 | None:intergenic | 35.0% | |
| ACAACATATTCTGTGGCAAA+AGG | - | chr3.2:58181451-58181470 | MS.gene049567:intron | 35.0% | |
| ACCACCTTCACTATAGTATT+TGG | + | chr3.2:58182821-58182840 | None:intergenic | 35.0% | |
| ACTAGAGAAGTTGAAAACTG+AGG | - | chr3.2:58181057-58181076 | MS.gene049567:CDS | 35.0% | |
| ACTGATATCAGTTTGCAGTT+GGG | - | chr3.2:58182213-58182232 | MS.gene049567:intron | 35.0% | |
| AGAAAGGAATAAGTCATGCA+TGG | + | chr3.2:58180634-58180653 | None:intergenic | 35.0% | |
| AGTGAGATAAACACCTCTAA+TGG | + | chr3.2:58181544-58181563 | None:intergenic | 35.0% | |
| ATATCAGTTGCTAGTGAATC+TGG | + | chr3.2:58182201-58182220 | None:intergenic | 35.0% | |
| ATATGAGTACGGTACAATAC+AGG | + | chr3.2:58181623-58181642 | None:intergenic | 35.0% | |
| ATCTCTATCGTAAAGCAACA+TGG | - | chr3.2:58182139-58182158 | MS.gene049567:intron | 35.0% | |
| CAAGTTCTTCTTTCTTATCG+TGG | + | chr3.2:58182089-58182108 | None:intergenic | 35.0% | |
| CACATGATGAATGTTCCAAA+AGG | + | chr3.2:58182000-58182019 | None:intergenic | 35.0% | |
| CACTATTTACTGGGAAAAGA+TGG | - | chr3.2:58182690-58182709 | MS.gene049567:intron | 35.0% | |
| CATCTAATACTGAATAGGTG+TGG | - | chr3.2:58182310-58182329 | MS.gene049567:intron | 35.0% | |
| CCAAATAGAACTACGAGATA+TGG | + | chr3.2:58181896-58181915 | None:intergenic | 35.0% | |
| CTAATGGTTAAACAAGCTCA+AGG | + | chr3.2:58181528-58181547 | None:intergenic | 35.0% | |
| GCTCGATTCAAAAAGAGATA+AGG | + | chr3.2:58181506-58181525 | None:intergenic | 35.0% | |
| GTCTGAACATTTCAAACAGT+TGG | - | chr3.2:58182864-58182883 | MS.gene049567:CDS | 35.0% | |
| TAGTATTTGGCAATAGCTAG+TGG | + | chr3.2:58182808-58182827 | None:intergenic | 35.0% | |
| TATGAGTACGGTACAATACA+GGG | + | chr3.2:58181622-58181641 | None:intergenic | 35.0% | |
| TGAACATTTCAAACAGTTGG+AGG | - | chr3.2:58182867-58182886 | MS.gene049567:CDS | 35.0% | |
| TGAGAATCCAGATTCTATCT+TGG | - | chr3.2:58182038-58182057 | MS.gene049567:CDS | 35.0% | |
| TTCTATCTTGGAAATTCTCG+TGG | - | chr3.2:58182050-58182069 | MS.gene049567:CDS | 35.0% | |
| TTCTTCTTCTGAACTTAAGG+AGG | - | chr3.2:58180937-58180956 | MS.gene049567:CDS | 35.0% | |
| TTTAGGGAAGCTTATGAACA+CGG | - | chr3.2:58181258-58181277 | MS.gene049567:CDS | 35.0% | |
| ! | AAGATGGTGTTGGAATTTCT+TGG | - | chr3.2:58180825-58180844 | MS.gene049567:CDS | 35.0% |
| ! | AAGCACTTGTGAGACTTTTT+AGG | - | chr3.2:58181241-58181260 | MS.gene049567:CDS | 35.0% |
| ! | ACTCTTTATAGACGCTTTTC+AGG | - | chr3.2:58181480-58181499 | MS.gene049567:intron | 35.0% |
| ! | ACTTTTATGCGAAGACTTGA+AGG | - | chr3.2:58183011-58183030 | MS.gene049567:CDS | 35.0% |
| ! | AGCAACATGGATAGATTTTC+CGG | - | chr3.2:58182152-58182171 | MS.gene049567:intron | 35.0% |
| ! | AGCACTTGTGAGACTTTTTA+GGG | - | chr3.2:58181242-58181261 | MS.gene049567:CDS | 35.0% |
| ! | CCATATCTCGTAGTTCTATT+TGG | - | chr3.2:58181893-58181912 | MS.gene049567:CDS | 35.0% |
| ! | CTTTTATGCGAAGACTTGAA+GGG | - | chr3.2:58183012-58183031 | MS.gene049567:CDS | 35.0% |
| ! | GAACTTGAATCTGTTGGTTA+TGG | - | chr3.2:58182102-58182121 | MS.gene049567:CDS | 35.0% |
| ! | GAATGACATGAAGGTACATA+CGG | - | chr3.2:58182552-58182571 | MS.gene049567:intron | 35.0% |
| ! | TAGTCTTCCATGATTTGCAA+AGG | + | chr3.2:58180787-58180806 | None:intergenic | 35.0% |
| ! | TCACTTGTGATGATGTATCT+AGG | - | chr3.2:58181559-58181578 | MS.gene049567:intron | 35.0% |
| ! | TGAGCTTGTTTAACCATTAG+AGG | - | chr3.2:58181528-58181547 | MS.gene049567:intron | 35.0% |
| ! | TTTTGTTGCAGATTTAGCAG+TGG | - | chr3.2:58180725-58180744 | MS.gene049567:CDS | 35.0% |
| !! | GTTGTTTTCATATGCTATCG+TGG | + | chr3.2:58181331-58181350 | None:intergenic | 35.0% |
| !! | TAATGAAGAGCATTGGAAGT+GGG | + | chr3.2:58181954-58181973 | None:intergenic | 35.0% |
| !!! | GATAGTTTTGAAGATGGTGT+TGG | - | chr3.2:58180815-58180834 | MS.gene049567:CDS | 35.0% |
| ACAGACACTGAACTTGTAAG+TGG | - | chr3.2:58182346-58182365 | MS.gene049567:intron | 40.0% | |
| ACTTGTAAGTGGAACGGTTA+AGG | - | chr3.2:58182357-58182376 | MS.gene049567:intron | 40.0% | |
| AGGGACTACTTACAGAAGAA+TGG | - | chr3.2:58182777-58182796 | MS.gene049567:intron | 40.0% | |
| ATTTCAAACAGTTGGAGGAG+TGG | - | chr3.2:58182872-58182891 | MS.gene049567:CDS | 40.0% | |
| CAAATGATATCGTCTTCTGC+AGG | + | chr3.2:58182516-58182535 | None:intergenic | 40.0% | |
| CAATTGACCATGATGCTGTT+GGG | - | chr3.2:58182653-58182672 | MS.gene049567:intron | 40.0% | |
| CACTGAACTTGTAAGTGGAA+CGG | - | chr3.2:58182351-58182370 | MS.gene049567:intron | 40.0% | |
| CTACCATCCTTTGCAAATCA+TGG | - | chr3.2:58180777-58180796 | MS.gene049567:CDS | 40.0% | |
| CTGATATCAGTTTGCAGTTG+GGG | - | chr3.2:58182214-58182233 | MS.gene049567:intron | 40.0% | |
| GCCAAATACTATAGTGAAGG+TGG | - | chr3.2:58182817-58182836 | MS.gene049567:CDS | 40.0% | |
| GTATATAGGCTTCGCTTTCT+AGG | - | chr3.2:58181651-58181670 | MS.gene049567:CDS | 40.0% | |
| TAGTCCCTCCATATAACCAA+CGG | + | chr3.2:58182765-58182784 | None:intergenic | 40.0% | |
| TGATATCAGTTTGCAGTTGG+GGG | - | chr3.2:58182215-58182234 | MS.gene049567:intron | 40.0% | |
| TTCGTGCCAGAAATATCTCA+GGG | + | chr3.2:58183122-58183141 | None:intergenic | 40.0% | |
| ! | CGATCTGTAATGAAGAGCAT+TGG | + | chr3.2:58181961-58181980 | None:intergenic | 40.0% |
| ! | CTTCCATGATTTGCAAAGGA+TGG | + | chr3.2:58180783-58180802 | None:intergenic | 40.0% |
| ! | GAATGTTCCAAAAGGCATGT+AGG | + | chr3.2:58181992-58182011 | None:intergenic | 40.0% |
| ! | GTATGTTTATGGGTTGCTCA+AGG | - | chr3.2:58183083-58183102 | MS.gene049567:CDS | 40.0% |
| ! | TTCTTTCTTATCGTGGACTG+AGG | + | chr3.2:58182082-58182101 | None:intergenic | 40.0% |
| ! | TTTCGTACCCGTTGGTTATA+TGG | - | chr3.2:58182754-58182773 | MS.gene049567:intron | 40.0% |
| !! | GTAATGAAGAGCATTGGAAG+TGG | + | chr3.2:58181955-58181974 | None:intergenic | 40.0% |
| AAAGCTGCACCTTCTCTTTG+TGG | + | chr3.2:58182736-58182755 | None:intergenic | 45.0% | |
| AAGTTTGACACCACGTATGC+AGG | - | chr3.2:58182242-58182261 | MS.gene049567:intron | 45.0% | |
| AATCTCCTGTCACCAACAAG+CGG | + | chr3.2:58181865-58181884 | None:intergenic | 45.0% | |
| ACAGTTGGAGGAGTGGTTAT+TGG | - | chr3.2:58182879-58182898 | MS.gene049567:CDS | 45.0% | |
| AGTCCCTCCATATAACCAAC+GGG | + | chr3.2:58182764-58182783 | None:intergenic | 45.0% | |
| AGTGTCCCCTGAGATATTTC+TGG | - | chr3.2:58183113-58183132 | MS.gene049567:intron | 45.0% | |
| ATTGTTACCGGACATGGTCT+TGG | - | chr3.2:58181751-58181770 | MS.gene049567:CDS | 45.0% | |
| CACGAAGTAGCTACATTCGT+TGG | - | chr3.2:58183136-58183155 | MS.gene049567:intron | 45.0% | |
| CAGATTCTGTCCACACACTA+TGG | - | chr3.2:58181407-58181426 | MS.gene049567:intron | 45.0% | |
| CAGCATCATGGTCAATTGGT+TGG | + | chr3.2:58182651-58182670 | None:intergenic | 45.0% | |
| CCAACAGCATCATGGTCAAT+TGG | + | chr3.2:58182655-58182674 | None:intergenic | 45.0% | |
| CCAATTGACCATGATGCTGT+TGG | - | chr3.2:58182652-58182671 | MS.gene049567:intron | 45.0% | |
| CTTCGTGCCAGAAATATCTC+AGG | + | chr3.2:58183123-58183142 | None:intergenic | 45.0% | |
| GAAGTAGCTACATTCGTTGG+TGG | - | chr3.2:58183139-58183158 | MS.gene049567:intron | 45.0% | |
| GAGATGAAGCCACAAAGAGA+AGG | - | chr3.2:58182724-58182743 | MS.gene049567:intron | 45.0% | |
| TACATACGGCCCAACTTGAA+TGG | - | chr3.2:58182566-58182585 | MS.gene049567:intron | 45.0% | |
| TAGCACACACAGCAAGAATG+TGG | - | chr3.2:58182936-58182955 | MS.gene049567:CDS | 45.0% | |
| TATGGAACCCAACAGCATCA+TGG | + | chr3.2:58182663-58182682 | None:intergenic | 45.0% | |
| TATTCACCTACCTGCATACG+TGG | + | chr3.2:58182255-58182274 | None:intergenic | 45.0% | |
| TCGTGCCAGAAATATCTCAG+GGG | + | chr3.2:58183121-58183140 | None:intergenic | 45.0% | |
| ! | ACCAGTACCTACATGCCTTT+TGG | - | chr3.2:58181982-58182001 | MS.gene049567:CDS | 45.0% |
| ! | CTTTTGGGCACATGTTGAAG+AGG | - | chr3.2:58182984-58183003 | MS.gene049567:CDS | 45.0% |
| ! | GTACCCGTTGGTTATATGGA+GGG | - | chr3.2:58182758-58182777 | MS.gene049567:intron | 45.0% |
| ! | GTCAAGTTTTCAGCTTGAGC+CGG | + | chr3.2:58182174-58182193 | None:intergenic | 45.0% |
| ! | TCCAAAAGGCATGTAGGTAC+TGG | + | chr3.2:58181986-58182005 | None:intergenic | 45.0% |
| AATCAACGCAGTCCGTGGAT+TGG | + | chr3.2:58181734-58181753 | None:intergenic | 50.0% | |
| CTTGGAAATTCTCGTGGCGT+TGG | - | chr3.2:58182056-58182075 | MS.gene049567:CDS | 50.0% | |
| GTAACAATCAACGCAGTCCG+TGG | + | chr3.2:58181739-58181758 | None:intergenic | 50.0% | |
| TGATCCTCCAAGACCATGTC+CGG | + | chr3.2:58181761-58181780 | None:intergenic | 50.0% | |
| TGTCCACACACTATGGCGTA+TGG | - | chr3.2:58181414-58181433 | MS.gene049567:intron | 50.0% | |
| TTGACACCACGTATGCAGGT+AGG | - | chr3.2:58182246-58182265 | MS.gene049567:intron | 50.0% | |
| ! | CGTACCCGTTGGTTATATGG+AGG | - | chr3.2:58182757-58182776 | MS.gene049567:intron | 50.0% |
| !! | CGGACTGCGTTGATTGTTAC+CGG | - | chr3.2:58181739-58181758 | MS.gene049567:CDS | 50.0% |
| !! | GCGTTGATTGTTACCGGACA+TGG | - | chr3.2:58181745-58181764 | MS.gene049567:CDS | 50.0% |
| ACCAACAAGCGGTGAACCGA+AGG | + | chr3.2:58181854-58181873 | None:intergenic | 55.0% | |
| ACCTTCGGTTCACCGCTTGT+TGG | - | chr3.2:58181850-58181869 | MS.gene049567:CDS | 55.0% | |
| CGTCCACTCTGCATCACCTT+CGG | - | chr3.2:58181835-58181854 | MS.gene049567:CDS | 55.0% | |
| CTATGGCGTATGGCCCTGTT+TGG | - | chr3.2:58181424-58181443 | MS.gene049567:intron | 55.0% | |
| GAACCGAAGGTGATGCAGAG+TGG | + | chr3.2:58181841-58181860 | None:intergenic | 55.0% | |
| ! | GTGCAGCTTTTCGTACCCGT+TGG | - | chr3.2:58182746-58182765 | MS.gene049567:intron | 55.0% |
| ! | GTTACCGGACATGGTCTTGG+AGG | - | chr3.2:58181754-58181773 | MS.gene049567:CDS | 55.0% |
| !! | GTTCACCGCTTGTTGGTGAC+AGG | - | chr3.2:58181857-58181876 | MS.gene049567:CDS | 55.0% |
| GGGCCATACGCCATAGTGTG+TGG | + | chr3.2:58181420-58181439 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 58180587 | 58183272 | 58180587 | ID=MS.gene049567 |
| chr3.2 | mRNA | 58180587 | 58183272 | 58180587 | ID=MS.gene049567.t1;Parent=MS.gene049567 |
| chr3.2 | exon | 58183256 | 58183272 | 58183256 | ID=MS.gene049567.t1.exon1;Parent=MS.gene049567.t1 |
| chr3.2 | CDS | 58183256 | 58183272 | 58183256 | ID=cds.MS.gene049567.t1;Parent=MS.gene049567.t1 |
| chr3.2 | exon | 58182781 | 58183123 | 58182781 | ID=MS.gene049567.t1.exon2;Parent=MS.gene049567.t1 |
| chr3.2 | CDS | 58182781 | 58183123 | 58182781 | ID=cds.MS.gene049567.t1;Parent=MS.gene049567.t1 |
| chr3.2 | exon | 58181596 | 58182138 | 58181596 | ID=MS.gene049567.t1.exon3;Parent=MS.gene049567.t1 |
| chr3.2 | CDS | 58181596 | 58182138 | 58181596 | ID=cds.MS.gene049567.t1;Parent=MS.gene049567.t1 |
| chr3.2 | exon | 58180587 | 58181339 | 58180587 | ID=MS.gene049567.t1.exon4;Parent=MS.gene049567.t1 |
| chr3.2 | CDS | 58180587 | 58181339 | 58180587 | ID=cds.MS.gene049567.t1;Parent=MS.gene049567.t1 |
| Gene Sequence |
| Protein sequence |
