Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07138.t1 | XP_024626987.1 | 98.9 | 623 | 7 | 0 | 1 | 623 | 1 | 623 | 0.00E+00 | 1193.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07138.t1 | Q9SA69 | 68.2 | 639 | 176 | 9 | 1 | 623 | 1 | 628 | 1.5e-232 | 807.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07138.t1 | A0A396HDB7 | 98.9 | 623 | 7 | 0 | 1 | 623 | 1 | 623 | 0.0e+00 | 1193.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049133 | MS.gene07138 | 0.81049 | 1.12E-50 | -1.69E-46 |
| MS.gene049418 | MS.gene07138 | 0.876963 | 9.19E-69 | -1.69E-46 |
| MS.gene049660 | MS.gene07138 | 0.83147 | 1.64E-55 | -1.69E-46 |
| MS.gene049697 | MS.gene07138 | 0.803454 | 3.46E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene07138 | 0.807425 | 5.09E-50 | -1.69E-46 |
| MS.gene05054 | MS.gene07138 | 0.826296 | 2.93E-54 | -1.69E-46 |
| MS.gene051067 | MS.gene07138 | 0.835678 | 1.46E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene07138 | 0.809938 | 1.48E-50 | -1.69E-46 |
| MS.gene052383 | MS.gene07138 | 0.832333 | 1.00E-55 | -1.69E-46 |
| MS.gene054614 | MS.gene07138 | 0.840218 | 9.92E-58 | -1.69E-46 |
| MS.gene055128 | MS.gene07138 | 0.803462 | 3.45E-49 | -1.69E-46 |
| MS.gene056228 | MS.gene07138 | 0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene056704 | MS.gene07138 | 0.83131 | 1.79E-55 | -1.69E-46 |
| MS.gene056870 | MS.gene07138 | 0.839131 | 1.90E-57 | -1.69E-46 |
| MS.gene05709 | MS.gene07138 | 0.823401 | 1.41E-53 | -1.69E-46 |
| MS.gene058197 | MS.gene07138 | 0.812568 | 3.97E-51 | -1.69E-46 |
| MS.gene058198 | MS.gene07138 | 0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene058386 | MS.gene07138 | 0.800049 | 1.73E-48 | -1.69E-46 |
| MS.gene05866 | MS.gene07138 | 0.801833 | 7.47E-49 | -1.69E-46 |
| MS.gene059163 | MS.gene07138 | 0.801662 | 8.10E-49 | -1.69E-46 |
| MS.gene059164 | MS.gene07138 | 0.800099 | 1.69E-48 | -1.69E-46 |
| MS.gene059300 | MS.gene07138 | 0.808003 | 3.83E-50 | -1.69E-46 |
| MS.gene060473 | MS.gene07138 | 0.804101 | 2.54E-49 | -1.69E-46 |
| MS.gene060825 | MS.gene07138 | 0.805999 | 1.02E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07138 | MS.gene91300 | PPI |
| MS.gene07138 | MS.gene060275 | PPI |
| MS.gene71625 | MS.gene07138 | PPI |
| MS.gene76815 | MS.gene07138 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07138.t1 | MTR_7g108290 | 98.331 | 599 | 9 | 1 | 1 | 598 | 1 | 599 | 0.0 | 1208 |
| MS.gene07138.t1 | MTR_1g088885 | 76.837 | 626 | 131 | 6 | 1 | 623 | 1 | 615 | 0.0 | 989 |
| MS.gene07138.t1 | MTR_4g022330 | 47.924 | 578 | 277 | 10 | 30 | 600 | 28 | 588 | 1.02e-179 | 523 |
| MS.gene07138.t1 | MTR_7g073980 | 44.034 | 595 | 289 | 11 | 34 | 615 | 31 | 594 | 1.50e-162 | 480 |
| MS.gene07138.t1 | MTR_5g016060 | 40.287 | 628 | 317 | 13 | 22 | 617 | 25 | 626 | 1.31e-150 | 449 |
| MS.gene07138.t1 | MTR_4g095430 | 39.701 | 602 | 314 | 16 | 25 | 602 | 1 | 577 | 4.98e-137 | 413 |
| MS.gene07138.t1 | MTR_3g062540 | 35.364 | 591 | 307 | 12 | 20 | 593 | 7 | 539 | 6.36e-117 | 360 |
| MS.gene07138.t1 | MTR_5g016060 | 37.918 | 538 | 277 | 12 | 111 | 617 | 1 | 512 | 5.17e-112 | 345 |
| MS.gene07138.t1 | MTR_3g062540 | 35.560 | 554 | 283 | 11 | 56 | 593 | 2 | 497 | 1.09e-108 | 337 |
| MS.gene07138.t1 | MTR_2g009340 | 31.373 | 663 | 384 | 12 | 13 | 619 | 20 | 667 | 2.29e-107 | 339 |
| MS.gene07138.t1 | MTR_2g084595 | 35.034 | 588 | 334 | 12 | 34 | 590 | 21 | 591 | 4.10e-107 | 337 |
| MS.gene07138.t1 | MTR_5g075640 | 33.773 | 607 | 305 | 11 | 20 | 594 | 8 | 549 | 8.19e-107 | 334 |
| MS.gene07138.t1 | MTR_8g078900 | 35.559 | 599 | 311 | 12 | 38 | 575 | 22 | 606 | 8.53e-107 | 337 |
| MS.gene07138.t1 | MTR_4g093850 | 33.120 | 625 | 347 | 15 | 31 | 602 | 38 | 644 | 3.53e-106 | 335 |
| MS.gene07138.t1 | MTR_8g078900 | 35.484 | 589 | 305 | 12 | 48 | 575 | 2 | 576 | 4.35e-105 | 331 |
| MS.gene07138.t1 | MTR_8g078900 | 36.364 | 539 | 288 | 10 | 78 | 575 | 42 | 566 | 6.68e-100 | 317 |
| MS.gene07138.t1 | MTR_8g090220 | 33.387 | 617 | 308 | 15 | 36 | 604 | 52 | 613 | 3.67e-99 | 316 |
| MS.gene07138.t1 | MTR_1g094850 | 34.035 | 570 | 337 | 12 | 38 | 590 | 28 | 575 | 4.11e-98 | 312 |
| MS.gene07138.t1 | MTR_2g018750 | 34.570 | 593 | 340 | 14 | 20 | 590 | 9 | 575 | 3.78e-97 | 310 |
| MS.gene07138.t1 | MTR_5g075640 | 33.509 | 570 | 283 | 10 | 56 | 594 | 2 | 506 | 9.65e-97 | 306 |
| MS.gene07138.t1 | MTR_8g090220 | 36.345 | 498 | 246 | 10 | 36 | 499 | 52 | 512 | 5.13e-96 | 304 |
| MS.gene07138.t1 | MTR_1g064360 | 35.081 | 553 | 307 | 13 | 26 | 556 | 15 | 537 | 7.53e-96 | 305 |
| MS.gene07138.t1 | MTR_5g032780 | 37.618 | 529 | 275 | 12 | 18 | 506 | 12 | 525 | 4.54e-89 | 290 |
| MS.gene07138.t1 | MTR_2g048390 | 35.920 | 451 | 249 | 8 | 26 | 448 | 15 | 453 | 2.55e-86 | 277 |
| MS.gene07138.t1 | MTR_1g106430 | 34.451 | 537 | 322 | 11 | 34 | 556 | 26 | 546 | 6.27e-86 | 281 |
| MS.gene07138.t1 | MTR_5g015790 | 36.157 | 484 | 265 | 11 | 34 | 498 | 25 | 483 | 1.11e-85 | 280 |
| MS.gene07138.t1 | MTR_4g134210 | 33.155 | 561 | 309 | 12 | 27 | 566 | 17 | 532 | 1.10e-80 | 266 |
| MS.gene07138.t1 | MTR_1g014070 | 34.105 | 475 | 290 | 9 | 34 | 497 | 25 | 487 | 2.23e-80 | 266 |
| MS.gene07138.t1 | MTR_4g093850 | 33.881 | 487 | 258 | 11 | 26 | 462 | 33 | 505 | 2.33e-79 | 261 |
| MS.gene07138.t1 | MTR_8g069330 | 33.276 | 583 | 331 | 16 | 39 | 587 | 29 | 587 | 1.80e-77 | 258 |
| MS.gene07138.t1 | MTR_8g078900 | 35.011 | 457 | 237 | 8 | 38 | 448 | 22 | 464 | 1.75e-76 | 251 |
| MS.gene07138.t1 | MTR_2g084595 | 33.710 | 442 | 250 | 9 | 34 | 448 | 21 | 446 | 9.76e-72 | 238 |
| MS.gene07138.t1 | MTR_8g078900 | 36.272 | 397 | 213 | 6 | 78 | 448 | 42 | 424 | 9.13e-70 | 232 |
| MS.gene07138.t1 | MTR_2g027410 | 31.959 | 485 | 277 | 10 | 27 | 496 | 17 | 463 | 3.51e-66 | 227 |
| MS.gene07138.t1 | MTR_1g082690 | 27.406 | 478 | 286 | 7 | 37 | 503 | 59 | 486 | 1.08e-64 | 222 |
| MS.gene07138.t1 | MTR_4g011530 | 33.333 | 441 | 240 | 12 | 189 | 616 | 18 | 417 | 3.94e-62 | 213 |
| MS.gene07138.t1 | MTR_2g102730 | 36.240 | 367 | 182 | 8 | 213 | 563 | 24 | 354 | 2.26e-58 | 202 |
| MS.gene07138.t1 | MTR_2g027410 | 31.002 | 429 | 243 | 10 | 83 | 496 | 1 | 391 | 4.94e-53 | 189 |
| MS.gene07138.t1 | MTR_4g045767 | 25.397 | 567 | 368 | 13 | 45 | 593 | 14 | 543 | 5.24e-42 | 160 |
| MS.gene07138.t1 | MTR_1g105870 | 37.900 | 219 | 114 | 4 | 43 | 259 | 38 | 236 | 1.16e-41 | 152 |
| MS.gene07138.t1 | MTR_4g074190 | 26.337 | 505 | 289 | 14 | 37 | 499 | 4 | 467 | 7.30e-41 | 156 |
| MS.gene07138.t1 | MTR_4g074190 | 26.652 | 454 | 254 | 12 | 84 | 499 | 9 | 421 | 3.50e-38 | 148 |
| MS.gene07138.t1 | MTR_4g074190 | 25.052 | 479 | 276 | 14 | 37 | 473 | 4 | 441 | 6.34e-32 | 129 |
| MS.gene07138.t1 | MTR_1g035720 | 27.682 | 289 | 148 | 6 | 296 | 575 | 286 | 522 | 9.63e-27 | 115 |
| MS.gene07138.t1 | MTR_2g010890 | 25.225 | 444 | 254 | 11 | 102 | 518 | 1 | 393 | 3.37e-26 | 112 |
| MS.gene07138.t1 | MTR_2g048375 | 40.580 | 138 | 75 | 3 | 464 | 601 | 1 | 131 | 6.14e-21 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07138.t1 | AT1G03010 | 68.701 | 639 | 173 | 9 | 1 | 623 | 1 | 628 | 0.0 | 855 |
| MS.gene07138.t1 | AT1G03010 | 68.914 | 608 | 162 | 9 | 32 | 623 | 31 | 627 | 0.0 | 807 |
| MS.gene07138.t1 | AT1G03010 | 68.914 | 608 | 162 | 9 | 32 | 623 | 5 | 601 | 0.0 | 807 |
| MS.gene07138.t1 | AT2G47860 | 60.870 | 644 | 216 | 12 | 1 | 623 | 1 | 629 | 0.0 | 730 |
| MS.gene07138.t1 | AT2G47860 | 58.771 | 667 | 216 | 13 | 1 | 623 | 1 | 652 | 0.0 | 717 |
| MS.gene07138.t1 | AT2G47860 | 60.421 | 523 | 175 | 10 | 121 | 623 | 1 | 511 | 0.0 | 570 |
| MS.gene07138.t1 | AT2G47860 | 60.421 | 523 | 175 | 10 | 121 | 623 | 1 | 511 | 0.0 | 570 |
| MS.gene07138.t1 | AT2G47860 | 61.269 | 457 | 155 | 7 | 1 | 448 | 1 | 444 | 0.0 | 531 |
| MS.gene07138.t1 | AT2G47860 | 58.333 | 480 | 155 | 8 | 1 | 448 | 1 | 467 | 3.13e-180 | 519 |
| MS.gene07138.t1 | AT5G48800 | 46.540 | 578 | 278 | 8 | 23 | 594 | 28 | 580 | 7.97e-175 | 510 |
| MS.gene07138.t1 | AT5G67385 | 40.129 | 618 | 320 | 13 | 22 | 617 | 10 | 599 | 6.00e-141 | 423 |
| MS.gene07138.t1 | AT3G08570 | 43.038 | 553 | 282 | 11 | 34 | 575 | 32 | 562 | 1.30e-140 | 423 |
| MS.gene07138.t1 | AT3G08660 | 40.842 | 546 | 276 | 11 | 34 | 575 | 32 | 534 | 1.21e-133 | 404 |
| MS.gene07138.t1 | AT5G67385 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.15e-126 | 384 |
| MS.gene07138.t1 | AT5G67385 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.15e-126 | 384 |
| MS.gene07138.t1 | AT5G67385 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.15e-126 | 384 |
| MS.gene07138.t1 | AT5G67385 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.15e-126 | 384 |
| MS.gene07138.t1 | AT3G08660 | 40.232 | 517 | 262 | 11 | 63 | 575 | 1 | 474 | 2.08e-121 | 370 |
| MS.gene07138.t1 | AT1G30440 | 35.434 | 587 | 327 | 12 | 26 | 575 | 15 | 586 | 1.32e-111 | 349 |
| MS.gene07138.t1 | AT5G03250 | 35.593 | 590 | 324 | 13 | 26 | 590 | 15 | 573 | 2.74e-106 | 333 |
| MS.gene07138.t1 | AT2G30520 | 33.445 | 595 | 326 | 13 | 22 | 594 | 15 | 561 | 1.82e-105 | 331 |
| MS.gene07138.t1 | AT5G13600 | 36.538 | 572 | 297 | 16 | 39 | 583 | 29 | 561 | 3.58e-101 | 320 |
| MS.gene07138.t1 | AT3G49970 | 33.786 | 589 | 287 | 15 | 48 | 617 | 6 | 510 | 3.79e-98 | 310 |
| MS.gene07138.t1 | AT3G49970 | 33.786 | 589 | 287 | 15 | 48 | 617 | 6 | 510 | 3.79e-98 | 310 |
| MS.gene07138.t1 | AT2G30520 | 33.036 | 560 | 306 | 12 | 56 | 594 | 2 | 513 | 6.74e-95 | 302 |
| MS.gene07138.t1 | AT2G30520 | 33.036 | 560 | 306 | 12 | 56 | 594 | 2 | 513 | 6.74e-95 | 302 |
| MS.gene07138.t1 | AT3G44820 | 31.940 | 598 | 333 | 11 | 26 | 575 | 12 | 583 | 4.20e-94 | 303 |
| MS.gene07138.t1 | AT5G66560 | 32.039 | 618 | 322 | 9 | 38 | 575 | 21 | 620 | 3.58e-92 | 298 |
| MS.gene07138.t1 | AT5G66560 | 31.908 | 608 | 316 | 9 | 48 | 575 | 2 | 591 | 4.36e-90 | 292 |
| MS.gene07138.t1 | AT2G14820 | 34.375 | 544 | 320 | 13 | 34 | 558 | 25 | 550 | 1.41e-89 | 291 |
| MS.gene07138.t1 | AT2G14820 | 34.375 | 544 | 320 | 13 | 34 | 558 | 25 | 550 | 1.41e-89 | 291 |
| MS.gene07138.t1 | AT5G66560 | 33.582 | 536 | 302 | 7 | 76 | 575 | 64 | 581 | 2.56e-88 | 287 |
| MS.gene07138.t1 | AT3G50840 | 33.333 | 573 | 310 | 10 | 22 | 575 | 2 | 521 | 2.60e-88 | 286 |
| MS.gene07138.t1 | AT3G08660 | 37.915 | 422 | 224 | 9 | 34 | 451 | 32 | 419 | 1.93e-87 | 279 |
| MS.gene07138.t1 | AT5G10250 | 32.184 | 609 | 311 | 16 | 31 | 598 | 44 | 591 | 2.35e-87 | 285 |
| MS.gene07138.t1 | AT5G10250 | 31.886 | 599 | 311 | 15 | 31 | 598 | 44 | 576 | 2.94e-84 | 276 |
| MS.gene07138.t1 | AT5G67440 | 36.059 | 477 | 268 | 10 | 34 | 498 | 25 | 476 | 3.49e-84 | 275 |
| MS.gene07138.t1 | AT5G67440 | 36.059 | 477 | 268 | 10 | 34 | 498 | 25 | 476 | 3.49e-84 | 275 |
| MS.gene07138.t1 | AT1G67900 | 36.276 | 521 | 287 | 11 | 18 | 507 | 12 | 518 | 7.09e-84 | 276 |
| MS.gene07138.t1 | AT1G67900 | 36.276 | 521 | 287 | 11 | 18 | 507 | 12 | 518 | 7.09e-84 | 276 |
| MS.gene07138.t1 | AT1G67900 | 36.276 | 521 | 287 | 11 | 18 | 507 | 12 | 518 | 7.09e-84 | 276 |
| MS.gene07138.t1 | AT1G67900 | 36.276 | 521 | 287 | 11 | 18 | 507 | 12 | 518 | 7.09e-84 | 276 |
| MS.gene07138.t1 | AT1G67900 | 36.276 | 521 | 287 | 11 | 18 | 507 | 12 | 518 | 7.09e-84 | 276 |
| MS.gene07138.t1 | AT1G67900 | 36.276 | 521 | 287 | 11 | 18 | 507 | 12 | 518 | 7.09e-84 | 276 |
| MS.gene07138.t1 | AT4G31820 | 35.404 | 483 | 265 | 11 | 29 | 498 | 20 | 468 | 2.42e-82 | 270 |
| MS.gene07138.t1 | AT5G67440 | 36.304 | 460 | 256 | 10 | 51 | 498 | 5 | 439 | 7.67e-80 | 263 |
| MS.gene07138.t1 | AT3G50840 | 33.086 | 538 | 288 | 10 | 57 | 575 | 1 | 485 | 7.88e-80 | 262 |
| MS.gene07138.t1 | AT3G50840 | 33.086 | 538 | 288 | 10 | 57 | 575 | 1 | 485 | 7.88e-80 | 262 |
| MS.gene07138.t1 | AT4G37590 | 32.165 | 485 | 271 | 11 | 34 | 501 | 25 | 468 | 1.62e-77 | 257 |
| MS.gene07138.t1 | AT5G03250 | 34.350 | 492 | 270 | 11 | 121 | 590 | 1 | 461 | 2.45e-77 | 254 |
| MS.gene07138.t1 | AT3G26490 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 1.06e-75 | 253 |
| MS.gene07138.t1 | AT3G26490 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 1.06e-75 | 253 |
| MS.gene07138.t1 | AT3G26490 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 1.06e-75 | 253 |
| MS.gene07138.t1 | AT2G23050 | 32.454 | 493 | 268 | 12 | 24 | 505 | 19 | 457 | 2.18e-74 | 246 |
| MS.gene07138.t1 | AT5G47800 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 2.22e-74 | 248 |
| MS.gene07138.t1 | AT5G47800 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 2.22e-74 | 248 |
| MS.gene07138.t1 | AT5G47800 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 2.22e-74 | 248 |
| MS.gene07138.t1 | AT5G47800 | 32.700 | 474 | 287 | 9 | 33 | 496 | 136 | 587 | 2.31e-73 | 249 |
| MS.gene07138.t1 | AT4G31820 | 34.076 | 449 | 249 | 11 | 63 | 498 | 1 | 415 | 6.97e-68 | 230 |
| MS.gene07138.t1 | AT5G66560 | 31.590 | 478 | 242 | 8 | 38 | 448 | 21 | 480 | 6.99e-64 | 218 |
| MS.gene07138.t1 | AT3G26490 | 33.617 | 470 | 259 | 13 | 18 | 453 | 12 | 462 | 4.34e-58 | 203 |
| MS.gene07138.t1 | AT1G52770 | 34.430 | 395 | 209 | 7 | 197 | 575 | 17 | 377 | 6.10e-58 | 202 |
| MS.gene07138.t1 | AT5G64330 | 34.384 | 349 | 202 | 8 | 269 | 596 | 371 | 713 | 6.35e-52 | 191 |
| MS.gene07138.t1 | AT5G64330 | 34.677 | 248 | 135 | 3 | 34 | 256 | 50 | 295 | 5.53e-41 | 159 |
| MS.gene07138.t1 | AT2G23050 | 32.564 | 390 | 209 | 10 | 121 | 505 | 1 | 341 | 1.04e-50 | 180 |
| MS.gene07138.t1 | AT5G64330 | 41.224 | 245 | 129 | 4 | 269 | 503 | 312 | 551 | 3.59e-49 | 181 |
| MS.gene07138.t1 | AT5G64330 | 34.061 | 229 | 124 | 3 | 53 | 256 | 10 | 236 | 4.86e-35 | 140 |
| MS.gene07138.t1 | AT3G15570 | 36.913 | 298 | 142 | 5 | 222 | 499 | 38 | 309 | 5.59e-49 | 177 |
| MS.gene07138.t1 | AT3G19850 | 25.202 | 496 | 303 | 9 | 36 | 497 | 3 | 464 | 6.42e-49 | 179 |
| MS.gene07138.t1 | AT5G64330 | 41.224 | 245 | 129 | 4 | 269 | 503 | 371 | 610 | 7.87e-49 | 181 |
| MS.gene07138.t1 | AT5G64330 | 34.553 | 246 | 138 | 2 | 34 | 256 | 50 | 295 | 2.93e-41 | 159 |
| MS.gene07138.t1 | AT3G22104 | 29.032 | 465 | 265 | 11 | 36 | 483 | 4 | 420 | 2.60e-45 | 168 |
| MS.gene07138.t1 | AT1G50280 | 25.000 | 488 | 309 | 10 | 32 | 492 | 3 | 460 | 1.25e-44 | 167 |
| MS.gene07138.t1 | AT5G48130 | 27.096 | 513 | 292 | 14 | 42 | 534 | 45 | 495 | 1.75e-44 | 168 |
| MS.gene07138.t1 | AT1G50280 | 24.943 | 441 | 282 | 8 | 74 | 492 | 14 | 427 | 1.17e-42 | 160 |
| MS.gene07138.t1 | AT5G17580 | 27.789 | 475 | 300 | 10 | 38 | 503 | 7 | 447 | 1.83e-39 | 152 |
| MS.gene07138.t1 | AT5G17580 | 27.368 | 475 | 302 | 9 | 38 | 503 | 22 | 462 | 1.89e-39 | 153 |
| MS.gene07138.t1 | AT3G03510 | 28.673 | 422 | 226 | 12 | 90 | 501 | 8 | 364 | 1.62e-38 | 148 |
| MS.gene07138.t1 | AT3G22104 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.18e-34 | 137 |
| MS.gene07138.t1 | AT3G22104 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.18e-34 | 137 |
| MS.gene07138.t1 | AT3G22104 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.18e-34 | 137 |
Find 106 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAGTTTCCTCTTGTTTCT+AGG | 0.091654 | 7.1:+5729237 | MS.gene07138:intron |
| CACCAATCTAAGGGTGTTTC+TGG | 0.142169 | 7.1:-5729698 | None:intergenic |
| GAGAAAATTGTCAAGTAATT+TGG | 0.180360 | 7.1:-5730278 | None:intergenic |
| GAATTGAAGCCTAGTGTTTC+AGG | 0.216646 | 7.1:+5727639 | MS.gene07138:CDS |
| TTTCTAGGAGTGGAAGATTT+AGG | 0.247375 | 7.1:+5729252 | MS.gene07138:CDS |
| TTCTTTACTACGAACAAATA+AGG | 0.259310 | 7.1:+5730878 | MS.gene07138:CDS |
| AGAATTCTCAGAAAAGAATT+TGG | 0.264671 | 7.1:+5729451 | MS.gene07138:CDS |
| AGAGTTGATCAGCAAAATTT+TGG | 0.272364 | 7.1:+5729799 | MS.gene07138:CDS |
| AACTTCTTGTAGAAGTGATT+TGG | 0.280903 | 7.1:+5730009 | MS.gene07138:CDS |
| ATCTTGTTTGGTGGTATTCA+TGG | 0.287931 | 7.1:+5730934 | MS.gene07138:CDS |
| AAGATATCAACCTTGTTAAT+AGG | 0.326340 | 7.1:+5729573 | MS.gene07138:CDS |
| ATTTACCTTGTGAAGTGAAT+AGG | 0.350440 | 7.1:-5728716 | None:intergenic |
| AGAGTTTCCCCACCAATCTA+AGG | 0.353136 | 7.1:-5729708 | None:intergenic |
| GAGAATGAGGTTGAATGATT+TGG | 0.354022 | 7.1:+5731071 | MS.gene07138:CDS |
| AGTATTCGTGGCAGTGGAAC+TGG | 0.358592 | 7.1:+5731207 | MS.gene07138:CDS |
| AGCTGTTGACATCTTCCTTA+AGG | 0.360096 | 7.1:+5730402 | MS.gene07138:CDS |
| TTAAGAATTGAGCTTTGCTT+TGG | 0.368579 | 7.1:-5730250 | None:intergenic |
| TTCTAAAACATTATCAATGA+TGG | 0.372684 | 7.1:+5729673 | MS.gene07138:CDS |
| TGTATAATGTTCGATGTGTT+TGG | 0.373596 | 7.1:-5729512 | None:intergenic |
| CAAAGATCAGGGAGTGGTAT+AGG | 0.379986 | 7.1:+5730967 | MS.gene07138:CDS |
| GGACACAATCAAATCTTGTT+TGG | 0.395537 | 7.1:+5730922 | MS.gene07138:CDS |
| AAACATGAAAGAAATGCTAT+TGG | 0.398126 | 7.1:-5729956 | None:intergenic |
| TTTCTTCGAACGAGTTATAT+CGG | 0.401205 | 7.1:+5729751 | MS.gene07138:CDS |
| ATAGGTTCATCCGAACATTA+AGG | 0.402802 | 7.1:+5730744 | MS.gene07138:intron |
| GAAAGGCTACCAGTTCAAAT+AGG | 0.406258 | 7.1:+5730847 | MS.gene07138:CDS |
| TGCAAAGAGCAACTAACTTC+TGG | 0.410485 | 7.1:+5729623 | MS.gene07138:CDS |
| GGTCAATTTCCTCAAAGATC+AGG | 0.415797 | 7.1:+5730955 | MS.gene07138:CDS |
| AAAGCAAAGCTCAATTCTTA+AGG | 0.417656 | 7.1:+5730252 | MS.gene07138:CDS |
| GAGCTTTGCTTTGGAGATCC+AGG | 0.425100 | 7.1:-5730241 | None:intergenic |
| AGGTTGATATCTTCTGATAA+AGG | 0.430627 | 7.1:-5729563 | None:intergenic |
| AGCACTTGCAGAACTACTTC+CGG | 0.434035 | 7.1:+5730345 | MS.gene07138:CDS |
| ATACCACTCCCTGATCTTTG+AGG | 0.435450 | 7.1:-5730964 | None:intergenic |
| TATGCACATAATTCTCTTCA+AGG | 0.435685 | 7.1:+5729827 | MS.gene07138:CDS |
| TCACTGGAGACATCAGATAT+TGG | 0.444897 | 7.1:-5728667 | None:intergenic |
| GCTTACTACCAACTCAATCT+AGG | 0.447056 | 7.1:+5729921 | MS.gene07138:CDS |
| GTATAATGTTCGATGTGTTT+GGG | 0.449390 | 7.1:-5729511 | None:intergenic |
| ACTTGTACACCTATTTGAAC+TGG | 0.460924 | 7.1:-5730856 | None:intergenic |
| CGCTCCGAGTCCTTAATGTT+CGG | 0.462622 | 7.1:-5730754 | None:intergenic |
| TTCCGTATTCACAGTATTCG+TGG | 0.463092 | 7.1:+5731195 | MS.gene07138:CDS |
| AGGCTTCGAAATGCGATGAA+TGG | 0.467453 | 7.1:+5730898 | MS.gene07138:CDS |
| TTTCCTCTTGTTTCTAGGAG+TGG | 0.473410 | 7.1:+5729242 | MS.gene07138:CDS |
| TCAGGGAGTGGTATAGGAAG+TGG | 0.474984 | 7.1:+5730973 | MS.gene07138:CDS |
| AGCCTAGTGTTTCAGGAAGA+AGG | 0.476944 | 7.1:+5727646 | MS.gene07138:CDS |
| GGAAACCGGGACCGTGGTTG+TGG | 0.476979 | 7.1:-5731240 | None:intergenic |
| TGCCACGAATACTGTGAATA+CGG | 0.478137 | 7.1:-5731197 | None:intergenic |
| CTTGTAACGCGAGCATGATC+CGG | 0.480182 | 7.1:-5730364 | None:intergenic |
| GATCGGTTTACAACTCGATC+AGG | 0.481839 | 7.1:+5730039 | MS.gene07138:CDS |
| GTAAGTCTTCCGACCGTGCC+AGG | 0.485055 | 7.1:+5729314 | MS.gene07138:CDS |
| TACTTGGATGGTAAGATCAC+TGG | 0.486316 | 7.1:-5728683 | None:intergenic |
| TCTTCTGCAATTCAATGTCA+AGG | 0.497562 | 7.1:-5729868 | None:intergenic |
| AAGAGCTGAATCATATCTAA+AGG | 0.501938 | 7.1:+5729478 | MS.gene07138:CDS |
| AATAGGTTGATGCTCCTACT+TGG | 0.504109 | 7.1:-5728699 | None:intergenic |
| AACCAGAAACACCCTTAGAT+TGG | 0.511015 | 7.1:+5729696 | MS.gene07138:CDS |
| CTTCTGCAATTCAATGTCAA+GGG | 0.515528 | 7.1:-5729867 | None:intergenic |
| AAACACATCGAACATTATAC+AGG | 0.516060 | 7.1:+5729514 | MS.gene07138:CDS |
| AAAATGGGAGTTGTAACTCT+TGG | 0.524005 | 7.1:+5727615 | None:intergenic |
| CACAATCAAATCTTGTTTGG+TGG | 0.524281 | 7.1:+5730925 | MS.gene07138:CDS |
| ATAGCTGCAAAATTCTGCTA+TGG | 0.525366 | 7.1:+5729356 | MS.gene07138:CDS |
| GAGTATGAATTTGACAGTCC+TGG | 0.526590 | 7.1:+5730223 | MS.gene07138:CDS |
| GCATGTCTTATGCTTGAACT+TGG | 0.528359 | 7.1:-5727678 | None:intergenic |
| TGAATCATATCTAAAGGAAA+CGG | 0.538877 | 7.1:+5729484 | MS.gene07138:CDS |
| GCATAAGACATGCCACTGAA+TGG | 0.541068 | 7.1:+5727688 | MS.gene07138:CDS |
| CATTGATTAGCCTATTAACA+AGG | 0.548783 | 7.1:-5729583 | None:intergenic |
| ATTCACAGTATTCGTGGCAG+TGG | 0.549968 | 7.1:+5731201 | MS.gene07138:CDS |
| TGCATCTACACCACCTGGCA+CGG | 0.550474 | 7.1:-5729327 | None:intergenic |
| TCATCCGAACATTAAGGACT+CGG | 0.556784 | 7.1:+5730750 | MS.gene07138:CDS |
| GTCAATTTCCTCAAAGATCA+GGG | 0.559074 | 7.1:+5730956 | MS.gene07138:CDS |
| AGAAACACCCTTAGATTGGT+GGG | 0.561564 | 7.1:+5729700 | MS.gene07138:CDS |
| GCCATGCCGCACAAAATGAA+AGG | 0.570379 | 7.1:+5730830 | MS.gene07138:CDS |
| ACCGATGCATAGTTATCTCT+AGG | 0.575158 | 7.1:-5731006 | None:intergenic |
| GATTTGAAGAATTTGCGTGC+AGG | 0.575709 | 7.1:-5731138 | None:intergenic |
| TTGAATTGCAGAAGAAACAA+AGG | 0.576448 | 7.1:+5729876 | MS.gene07138:CDS |
| CTAGTCCACAACCACGGTCC+CGG | 0.580906 | 7.1:+5731235 | MS.gene07138:CDS |
| TCCTAGAGATAACTATGCAT+CGG | 0.582662 | 7.1:+5731005 | MS.gene07138:CDS |
| AAGTAACAAGAATGAGAATG+AGG | 0.586252 | 7.1:+5731058 | MS.gene07138:CDS |
| CAGAAACACCCTTAGATTGG+TGG | 0.586270 | 7.1:+5729699 | MS.gene07138:CDS |
| GGTTGATGCTCCTACTTGGA+TGG | 0.586634 | 7.1:-5728695 | None:intergenic |
| CTTGTAGAAGTGATTTGGAG+AGG | 0.587525 | 7.1:+5730014 | MS.gene07138:CDS |
| TGAATTGCAGAAGAAACAAA+GGG | 0.588131 | 7.1:+5729877 | MS.gene07138:CDS |
| GCACTCGAAGGTGAATTCGT+TGG | 0.590719 | 7.1:-5730085 | None:intergenic |
| AGTGATTTGGAGAGGCGGAT+CGG | 0.592594 | 7.1:+5730022 | MS.gene07138:CDS |
| TCTACACCACCTGGCACGGT+CGG | 0.595705 | 7.1:-5729323 | None:intergenic |
| CTTCCACTCCTAGAAACAAG+AGG | 0.596628 | 7.1:-5729245 | None:intergenic |
| GAGTTTCCCCACCAATCTAA+GGG | 0.605139 | 7.1:-5729707 | None:intergenic |
| ATATCGGTTATGAAATCGAA+GGG | 0.606291 | 7.1:+5729767 | MS.gene07138:CDS |
| AGTGATCTTACCATCCAAGT+AGG | 0.606850 | 7.1:+5728685 | MS.gene07138:CDS |
| CTTCGAAATGCGATGAATGG+AGG | 0.608119 | 7.1:+5730901 | MS.gene07138:CDS |
| GTCCTTCTTCCTGAAACACT+AGG | 0.612878 | 7.1:-5727648 | None:intergenic |
| ATGCACATAATTCTCTTCAA+GGG | 0.619987 | 7.1:+5729828 | MS.gene07138:CDS |
| TGAAAAGGAAACCGGGACCG+TGG | 0.620189 | 7.1:-5731246 | None:intergenic |
| TCAAATGCATCTACACCACC+TGG | 0.627222 | 7.1:-5729332 | None:intergenic |
| TATATCGGTTATGAAATCGA+AGG | 0.631995 | 7.1:+5729766 | MS.gene07138:CDS |
| ATCAACCTATTCACTTCACA+AGG | 0.635818 | 7.1:+5728711 | MS.gene07138:CDS |
| TAGCATAGCAATATTCGAGA+GGG | 0.638972 | 7.1:-5729396 | None:intergenic |
| TTTCCTCAAAGATCAGGGAG+TGG | 0.639154 | 7.1:+5730961 | MS.gene07138:CDS |
| AAAATTATAATACCATTCAG+TGG | 0.645788 | 7.1:-5727700 | None:intergenic |
| GAAACACCCTTAGATTGGTG+GGG | 0.662827 | 7.1:+5729701 | MS.gene07138:CDS |
| GTAGAAGTGATTTGGAGAGG+CGG | 0.668323 | 7.1:+5730017 | MS.gene07138:CDS |
| ATAGCATAGCAATATTCGAG+AGG | 0.677800 | 7.1:-5729397 | None:intergenic |
| AGTCTTCCGACCGTGCCAGG+TGG | 0.688935 | 7.1:+5729317 | MS.gene07138:CDS |
| CATGCTCGCGTTACAAGCGA+CGG | 0.689890 | 7.1:+5730370 | MS.gene07138:CDS |
| TTCGTGGCAGTGGAACTGGA+AGG | 0.695731 | 7.1:+5731211 | MS.gene07138:CDS |
| ATTCTGCTATGGAATCAATG+TGG | 0.703925 | 7.1:+5729367 | MS.gene07138:CDS |
| ATTGTGTTGTGAGCACTCGA+AGG | 0.726239 | 7.1:-5730097 | None:intergenic |
| GAAGGTCTAGTCCACAACCA+CGG | 0.728361 | 7.1:+5731229 | MS.gene07138:CDS |
| ACGGTCGGAAGACTTACGCG+CGG | 0.751124 | 7.1:-5729308 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGTATGATAATAATTGA+TGG | - | chr7.1:5728238-5728257 | None:intergenic | 15.0% |
| !! | ATAATTATAACATATCAGAA+TGG | - | chr7.1:5728754-5728773 | None:intergenic | 15.0% |
| !! | TTATAATTATACATTCAACA+TGG | + | chr7.1:5728764-5728783 | MS.gene07138:intron | 15.0% |
| !!! | AATATTATTTTCTAACGTTA+TGG | - | chr7.1:5730528-5730547 | None:intergenic | 15.0% |
| !!! | ACTTTTTTCTTTTTTTTTGA+AGG | + | chr7.1:5727729-5727748 | MS.gene07138:intron | 15.0% |
| !!! | ATATTATTTTCTAACGTTAT+GGG | - | chr7.1:5730527-5730546 | None:intergenic | 15.0% |
| !!! | CTGTATCAAAATAATATTTT+AGG | - | chr7.1:5728427-5728446 | None:intergenic | 15.0% |
| !!! | TCAAAATAATATTTTAGGAA+TGG | - | chr7.1:5728422-5728441 | None:intergenic | 15.0% |
| !!! | TTTAAAACCTTTTATACTAA+CGG | - | chr7.1:5728913-5728932 | None:intergenic | 15.0% |
| !!! | TTTTTATGTAATGCAATAAA+TGG | - | chr7.1:5728508-5728527 | None:intergenic | 15.0% |
| !! | AAAATTATAATACCATTCAG+TGG | - | chr7.1:5727703-5727722 | None:intergenic | 20.0% |
| !! | TAATTAATGACTGAAATTGT+TGG | + | chr7.1:5730709-5730728 | MS.gene07138:intron | 20.0% |
| !! | TGATAACATACTATATAAGA+TGG | - | chr7.1:5729080-5729099 | None:intergenic | 20.0% |
| !!! | ATCATTGATAATGTTTTAGA+AGG | - | chr7.1:5729674-5729693 | None:intergenic | 20.0% |
| !!! | ATGATATAGATTCAATTTTG+AGG | + | chr7.1:5730122-5730141 | MS.gene07138:CDS | 20.0% |
| !!! | TCTCTGAAAATTTCAATTTT+TGG | + | chr7.1:5728560-5728579 | MS.gene07138:intron | 20.0% |
| !!! | TGTTGGTTTATTTATCATAT+AGG | + | chr7.1:5730726-5730745 | MS.gene07138:intron | 20.0% |
| !!! | TTAATAGTGTTTTCAATAGA+AGG | - | chr7.1:5730448-5730467 | None:intergenic | 20.0% |
| !!! | TTCTAAAACATTATCAATGA+TGG | + | chr7.1:5729673-5729692 | MS.gene07138:CDS | 20.0% |
| ! | AAACATGAAAGAAATGCTAT+TGG | - | chr7.1:5729959-5729978 | None:intergenic | 25.0% |
| ! | AACCCATTAATGCAAATAAT+TGG | - | chr7.1:5728382-5728401 | None:intergenic | 25.0% |
| ! | AAGATATCAACCTTGTTAAT+AGG | + | chr7.1:5729573-5729592 | MS.gene07138:CDS | 25.0% |
| ! | AATTTCATGAAATCTTGAAG+TGG | - | chr7.1:5727852-5727871 | None:intergenic | 25.0% |
| ! | ACTCCAATTATTTGCATTAA+TGG | + | chr7.1:5728376-5728395 | MS.gene07138:intron | 25.0% |
| ! | AGAATTCTCAGAAAAGAATT+TGG | + | chr7.1:5729451-5729470 | MS.gene07138:CDS | 25.0% |
| ! | ATTAGTTCATCAACCATAAT+AGG | - | chr7.1:5727981-5728000 | None:intergenic | 25.0% |
| ! | CTCCAATTATTTGCATTAAT+GGG | + | chr7.1:5728377-5728396 | MS.gene07138:intron | 25.0% |
| ! | GAGAAAATTGTCAAGTAATT+TGG | - | chr7.1:5730281-5730300 | None:intergenic | 25.0% |
| ! | TGAATCATATCTAAAGGAAA+CGG | + | chr7.1:5729484-5729503 | MS.gene07138:CDS | 25.0% |
| ! | TTCTTTACTACGAACAAATA+AGG | + | chr7.1:5730878-5730897 | MS.gene07138:CDS | 25.0% |
| ! | TTGCATTTCCAAATTCATTT+AGG | - | chr7.1:5728275-5728294 | None:intergenic | 25.0% |
| !! | AAACTTAAGTAACCATTTTG+AGG | + | chr7.1:5728453-5728472 | MS.gene07138:intron | 25.0% |
| !! | ATCTTAATTTTCCAATCTCA+AGG | - | chr7.1:5728107-5728126 | None:intergenic | 25.0% |
| !!! | CATACTATTGTTTTAGCTTT+TGG | + | chr7.1:5728249-5728268 | MS.gene07138:intron | 25.0% |
| !!! | CTTTTCTACTTTTCTGAATT+TGG | + | chr7.1:5730147-5730166 | MS.gene07138:CDS | 25.0% |
| !!! | TTGCTTTGATTTGTAAAGAA+AGG | + | chr7.1:5730679-5730698 | MS.gene07138:intron | 25.0% |
| AAACACATCGAACATTATAC+AGG | + | chr7.1:5729514-5729533 | MS.gene07138:CDS | 30.0% | |
| AAAGCAAAGCTCAATTCTTA+AGG | + | chr7.1:5730252-5730271 | MS.gene07138:CDS | 30.0% | |
| AACTTCTTGTAGAAGTGATT+TGG | + | chr7.1:5730009-5730028 | MS.gene07138:CDS | 30.0% | |
| AAGAGCTGAATCATATCTAA+AGG | + | chr7.1:5729478-5729497 | MS.gene07138:CDS | 30.0% | |
| AAGTAACAAGAATGAGAATG+AGG | + | chr7.1:5731058-5731077 | MS.gene07138:CDS | 30.0% | |
| ATAGCAAAACTACATTTGAC+AGG | - | chr7.1:5729115-5729134 | None:intergenic | 30.0% | |
| ATCATGTCATTGTTTGGTAA+AGG | - | chr7.1:5728153-5728172 | None:intergenic | 30.0% | |
| ATGCACATAATTCTCTTCAA+GGG | + | chr7.1:5729828-5729847 | MS.gene07138:CDS | 30.0% | |
| ATGGTGCAATAATAAGACAT+TGG | - | chr7.1:5728489-5728508 | None:intergenic | 30.0% | |
| ATTTACCTTGTGAAGTGAAT+AGG | - | chr7.1:5728719-5728738 | None:intergenic | 30.0% | |
| CCAAAAAAATTGTCCATTGT+CGG | - | chr7.1:5728304-5728323 | None:intergenic | 30.0% | |
| CTACGTGTATATAATGATTC+AGG | + | chr7.1:5728625-5728644 | MS.gene07138:intron | 30.0% | |
| GACATGAAAATTTCAAAGCA+TGG | - | chr7.1:5728606-5728625 | None:intergenic | 30.0% | |
| GTATAATGTTCGATGTGTTT+GGG | - | chr7.1:5729514-5729533 | None:intergenic | 30.0% | |
| TATGCACATAATTCTCTTCA+AGG | + | chr7.1:5729827-5729846 | MS.gene07138:CDS | 30.0% | |
| TGAATTGCAGAAGAAACAAA+GGG | + | chr7.1:5729877-5729896 | MS.gene07138:CDS | 30.0% | |
| TGATACACCGTTAGTATAAA+AGG | + | chr7.1:5728903-5728922 | MS.gene07138:intron | 30.0% | |
| TGTATAATGTTCGATGTGTT+TGG | - | chr7.1:5729515-5729534 | None:intergenic | 30.0% | |
| TTAAGAATTGAGCTTTGCTT+TGG | - | chr7.1:5730253-5730272 | None:intergenic | 30.0% | |
| TTGAATTGCAGAAGAAACAA+AGG | + | chr7.1:5729876-5729895 | MS.gene07138:CDS | 30.0% | |
| TTTCATATAGCTAACAGATG+AGG | - | chr7.1:5728198-5728217 | None:intergenic | 30.0% | |
| TTTCTTCGAACGAGTTATAT+CGG | + | chr7.1:5729751-5729770 | MS.gene07138:CDS | 30.0% | |
| ! | AAGGAACAAGATTTTCACAA+TGG | - | chr7.1:5729547-5729566 | None:intergenic | 30.0% |
| ! | ATATCGGTTATGAAATCGAA+GGG | + | chr7.1:5729767-5729786 | MS.gene07138:CDS | 30.0% |
| ! | CATGTTTCTGAATAACTTCT+AGG | - | chr7.1:5727797-5727816 | None:intergenic | 30.0% |
| ! | GAATGGCTATTTCAATATAG+TGG | - | chr7.1:5728405-5728424 | None:intergenic | 30.0% |
| ! | TATATCGGTTATGAAATCGA+AGG | + | chr7.1:5729766-5729785 | MS.gene07138:CDS | 30.0% |
| !! | AATCAATTGTTTTGCTTAGG+CGG | - | chr7.1:5730783-5730802 | None:intergenic | 30.0% |
| !! | AGAGTTGATCAGCAAAATTT+TGG | + | chr7.1:5729799-5729818 | MS.gene07138:CDS | 30.0% |
| !! | AGGTTGATATCTTCTGATAA+AGG | - | chr7.1:5729566-5729585 | None:intergenic | 30.0% |
| !! | CATTGATTAGCCTATTAACA+AGG | - | chr7.1:5729586-5729605 | None:intergenic | 30.0% |
| !! | GACAATCAATTGTTTTGCTT+AGG | - | chr7.1:5730786-5730805 | None:intergenic | 30.0% |
| !! | TTCTCTTTTGAAAAGGAAAC+CGG | - | chr7.1:5731257-5731276 | None:intergenic | 30.0% |
| !!! | GATTTTGAGTTCTAACCTTA+AGG | - | chr7.1:5730420-5730439 | None:intergenic | 30.0% |
| ACGAAATACCAACACAAACA+CGG | + | chr7.1:5728006-5728025 | MS.gene07138:intron | 35.0% | |
| ACTTGTACACCTATTTGAAC+TGG | - | chr7.1:5730859-5730878 | None:intergenic | 35.0% | |
| ATAGCATAGCAATATTCGAG+AGG | - | chr7.1:5729400-5729419 | None:intergenic | 35.0% | |
| ATAGCTGCAAAATTCTGCTA+TGG | + | chr7.1:5729356-5729375 | MS.gene07138:CDS | 35.0% | |
| ATAGGTTCATCCGAACATTA+AGG | + | chr7.1:5730744-5730763 | MS.gene07138:intron | 35.0% | |
| ATCAACCTATTCACTTCACA+AGG | + | chr7.1:5728711-5728730 | MS.gene07138:CDS | 35.0% | |
| ATTCTGCTATGGAATCAATG+TGG | + | chr7.1:5729367-5729386 | MS.gene07138:CDS | 35.0% | |
| CAACCATAATAGGATCTGAA+GGG | - | chr7.1:5727971-5727990 | None:intergenic | 35.0% | |
| CTAGAAACAAGAGGAAACTA+GGG | - | chr7.1:5729239-5729258 | None:intergenic | 35.0% | |
| CTTCTGCAATTCAATGTCAA+GGG | - | chr7.1:5729870-5729889 | None:intergenic | 35.0% | |
| GAAAATTTCAAAGCATGGCA+AGG | - | chr7.1:5728601-5728620 | None:intergenic | 35.0% | |
| GAGAATGAGGTTGAATGATT+TGG | + | chr7.1:5731071-5731090 | MS.gene07138:CDS | 35.0% | |
| GGACACAATCAAATCTTGTT+TGG | + | chr7.1:5730922-5730941 | MS.gene07138:CDS | 35.0% | |
| GGATAAGAATAGCCTCAAAA+TGG | - | chr7.1:5728468-5728487 | None:intergenic | 35.0% | |
| GTCAATTTCCTCAAAGATCA+GGG | + | chr7.1:5730956-5730975 | MS.gene07138:CDS | 35.0% | |
| TAGCATAGCAATATTCGAGA+GGG | - | chr7.1:5729399-5729418 | None:intergenic | 35.0% | |
| TCAACCATAATAGGATCTGA+AGG | - | chr7.1:5727972-5727991 | None:intergenic | 35.0% | |
| TCCTAGAGATAACTATGCAT+CGG | + | chr7.1:5731005-5731024 | MS.gene07138:CDS | 35.0% | |
| TCTTCTGCAATTCAATGTCA+AGG | - | chr7.1:5729871-5729890 | None:intergenic | 35.0% | |
| TTTGGTAAAGGACTACATCA+AGG | - | chr7.1:5728141-5728160 | None:intergenic | 35.0% | |
| ! | ACATGATGCTCGATTTTGAA+TGG | + | chr7.1:5728166-5728185 | MS.gene07138:intron | 35.0% |
| ! | ACATTCAACATGGTTTTCTC+TGG | + | chr7.1:5728774-5728793 | MS.gene07138:intron | 35.0% |
| ! | ATCTTGTTTGGTGGTATTCA+TGG | + | chr7.1:5730934-5730953 | MS.gene07138:CDS | 35.0% |
| ! | CACAATCAAATCTTGTTTGG+TGG | + | chr7.1:5730925-5730944 | MS.gene07138:CDS | 35.0% |
| ! | GCAAGTGCTATGAATTTTGA+TGG | - | chr7.1:5730334-5730353 | None:intergenic | 35.0% |
| ! | GCTTTTGGCCTAAATGAATT+TGG | + | chr7.1:5728264-5728283 | MS.gene07138:intron | 35.0% |
| ! | GTCTTATTGAGTTCGAGTTT+GGG | + | chr7.1:5727899-5727918 | MS.gene07138:intron | 35.0% |
| ! | TACTTTTCTGAATTTGGACG+AGG | + | chr7.1:5730153-5730172 | MS.gene07138:CDS | 35.0% |
| ! | TCTGGTTTACATTCCAAGTT+AGG | + | chr7.1:5728792-5728811 | MS.gene07138:intron | 35.0% |
| ! | TCTTATTGAGTTCGAGTTTG+GGG | + | chr7.1:5727900-5727919 | MS.gene07138:intron | 35.0% |
| ! | TGTTTGTGTTGGTATTTCGT+AGG | - | chr7.1:5728006-5728025 | None:intergenic | 35.0% |
| ! | TTTCTAGGAGTGGAAGATTT+AGG | + | chr7.1:5729252-5729271 | MS.gene07138:CDS | 35.0% |
| !! | AGTCTTATTGAGTTCGAGTT+TGG | + | chr7.1:5727898-5727917 | MS.gene07138:intron | 35.0% |
| !! | TCTCTTTTGAAAAGGAAACC+GGG | - | chr7.1:5731256-5731275 | None:intergenic | 35.0% |
| !!! | CCGACAATGGACAATTTTTT+TGG | + | chr7.1:5728301-5728320 | MS.gene07138:intron | 35.0% |
| AACCAGAAACACCCTTAGAT+TGG | + | chr7.1:5729696-5729715 | MS.gene07138:CDS | 40.0% | |
| ACCGATGCATAGTTATCTCT+AGG | - | chr7.1:5731009-5731028 | None:intergenic | 40.0% | |
| AGAAACACCCTTAGATTGGT+GGG | + | chr7.1:5729700-5729719 | MS.gene07138:CDS | 40.0% | |
| AGCTGTTGACATCTTCCTTA+AGG | + | chr7.1:5730402-5730421 | MS.gene07138:CDS | 40.0% | |
| AGTGATCTTACCATCCAAGT+AGG | + | chr7.1:5728685-5728704 | MS.gene07138:CDS | 40.0% | |
| ATCAATGTCCGTGTTTGTGT+TGG | - | chr7.1:5728017-5728036 | None:intergenic | 40.0% | |
| CCTAGAAACAAGAGGAAACT+AGG | - | chr7.1:5729240-5729259 | None:intergenic | 40.0% | |
| CTATTCATTGCCACCTAACT+TGG | - | chr7.1:5728808-5728827 | None:intergenic | 40.0% | |
| GAAAGGCTACCAGTTCAAAT+AGG | + | chr7.1:5730847-5730866 | MS.gene07138:CDS | 40.0% | |
| GAATTGAAGCCTAGTGTTTC+AGG | + | chr7.1:5727639-5727658 | MS.gene07138:CDS | 40.0% | |
| GAGTATGAATTTGACAGTCC+TGG | + | chr7.1:5730223-5730242 | MS.gene07138:CDS | 40.0% | |
| GATTTGAAGAATTTGCGTGC+AGG | - | chr7.1:5731141-5731160 | None:intergenic | 40.0% | |
| GCATGTCTTATGCTTGAACT+TGG | - | chr7.1:5727681-5727700 | None:intergenic | 40.0% | |
| GCTTACTACCAACTCAATCT+AGG | + | chr7.1:5729921-5729940 | MS.gene07138:CDS | 40.0% | |
| GGTCAATTTCCTCAAAGATC+AGG | + | chr7.1:5730955-5730974 | MS.gene07138:CDS | 40.0% | |
| GGTTTACATTCCAAGTTAGG+TGG | + | chr7.1:5728795-5728814 | MS.gene07138:intron | 40.0% | |
| GTTAGGTGGCAATGAATAGT+TGG | + | chr7.1:5728809-5728828 | MS.gene07138:intron | 40.0% | |
| GTTATTGGACACCTTGAGAT+TGG | + | chr7.1:5728093-5728112 | MS.gene07138:intron | 40.0% | |
| TACTTGGATGGTAAGATCAC+TGG | - | chr7.1:5728686-5728705 | None:intergenic | 40.0% | |
| TCACTGGAGACATCAGATAT+TGG | - | chr7.1:5728670-5728689 | None:intergenic | 40.0% | |
| TCATCCGAACATTAAGGACT+CGG | + | chr7.1:5730750-5730769 | MS.gene07138:CDS | 40.0% | |
| TCGAGCATCATGTCATTGTT+TGG | - | chr7.1:5728159-5728178 | None:intergenic | 40.0% | |
| TGCAAAGAGCAACTAACTTC+TGG | + | chr7.1:5729623-5729642 | MS.gene07138:CDS | 40.0% | |
| TGCCACGAATACTGTGAATA+CGG | - | chr7.1:5731200-5731219 | None:intergenic | 40.0% | |
| TTCCGTATTCACAGTATTCG+TGG | + | chr7.1:5731195-5731214 | MS.gene07138:CDS | 40.0% | |
| ! | CCAAGAGCTCAAAAGCATAA+TGG | - | chr7.1:5729149-5729168 | None:intergenic | 40.0% |
| ! | CCATTATGCTTTTGAGCTCT+TGG | + | chr7.1:5729146-5729165 | MS.gene07138:intron | 40.0% |
| ! | CCTAGTTTCCTCTTGTTTCT+AGG | + | chr7.1:5729237-5729256 | MS.gene07138:intron | 40.0% |
| ! | CTTATTGAGTTCGAGTTTGG+GGG | + | chr7.1:5727901-5727920 | MS.gene07138:intron | 40.0% |
| ! | CTTGTAGAAGTGATTTGGAG+AGG | + | chr7.1:5730014-5730033 | MS.gene07138:CDS | 40.0% |
| ! | GAGCTTTTCCTAGATTGAGT+TGG | - | chr7.1:5729932-5729951 | None:intergenic | 40.0% |
| ! | TGGTAGCCTTTCATTTTGTG+CGG | - | chr7.1:5730839-5730858 | None:intergenic | 40.0% |
| ! | TGTTAGTGTCGTGTCGTTAT+TGG | + | chr7.1:5728078-5728097 | MS.gene07138:intron | 40.0% |
| ! | TTATGCTTTTGAGCTCTTGG+TGG | + | chr7.1:5729149-5729168 | MS.gene07138:intron | 40.0% |
| ! | TTTTCTGAATTTGGACGAGG+TGG | + | chr7.1:5730156-5730175 | MS.gene07138:CDS | 40.0% |
| !! | AATAGGTTGATGCTCCTACT+TGG | - | chr7.1:5728702-5728721 | None:intergenic | 40.0% |
| !! | TTTCCTCTTGTTTCTAGGAG+TGG | + | chr7.1:5729242-5729261 | MS.gene07138:CDS | 40.0% |
| !!! | CAGGAAGAGTCTTTTTTTGC+AGG | + | chr7.1:5728644-5728663 | MS.gene07138:intron | 40.0% |
| AATGCAAAGCTCACCGACAA+TGG | + | chr7.1:5728288-5728307 | MS.gene07138:intron | 45.0% | |
| AGAGTTGAATCAGTGTGTCG+CGG | - | chr7.1:5730657-5730676 | None:intergenic | 45.0% | |
| AGAGTTTCCCCACCAATCTA+AGG | - | chr7.1:5729711-5729730 | None:intergenic | 45.0% | |
| AGCACTTGCAGAACTACTTC+CGG | + | chr7.1:5730345-5730364 | MS.gene07138:CDS | 45.0% | |
| AGCCTAGTGTTTCAGGAAGA+AGG | + | chr7.1:5727646-5727665 | MS.gene07138:CDS | 45.0% | |
| AGGCTTCGAAATGCGATGAA+TGG | + | chr7.1:5730898-5730917 | MS.gene07138:CDS | 45.0% | |
| ATACCACTCCCTGATCTTTG+AGG | - | chr7.1:5730967-5730986 | None:intergenic | 45.0% | |
| ATTCACAGTATTCGTGGCAG+TGG | + | chr7.1:5731201-5731220 | MS.gene07138:CDS | 45.0% | |
| ATTGGAGTTTCACGCTAGCA+TGG | - | chr7.1:5728364-5728383 | None:intergenic | 45.0% | |
| ATTGTGTTGTGAGCACTCGA+AGG | - | chr7.1:5730100-5730119 | None:intergenic | 45.0% | |
| CAAAGATCAGGGAGTGGTAT+AGG | + | chr7.1:5730967-5730986 | MS.gene07138:CDS | 45.0% | |
| CAGAAACACCCTTAGATTGG+TGG | + | chr7.1:5729699-5729718 | MS.gene07138:CDS | 45.0% | |
| CCATAATAGGATCTGAAGGG+AGG | - | chr7.1:5727968-5727987 | None:intergenic | 45.0% | |
| CCTCCCTTCAGATCCTATTA+TGG | + | chr7.1:5727965-5727984 | MS.gene07138:intron | 45.0% | |
| CTTCCACTCCTAGAAACAAG+AGG | - | chr7.1:5729248-5729267 | None:intergenic | 45.0% | |
| CTTCGAAATGCGATGAATGG+AGG | + | chr7.1:5730901-5730920 | MS.gene07138:CDS | 45.0% | |
| GAAACACCCTTAGATTGGTG+GGG | + | chr7.1:5729701-5729720 | MS.gene07138:CDS | 45.0% | |
| GAGTTTCCCCACCAATCTAA+GGG | - | chr7.1:5729710-5729729 | None:intergenic | 45.0% | |
| GCATAAGACATGCCACTGAA+TGG | + | chr7.1:5727688-5727707 | MS.gene07138:CDS | 45.0% | |
| GTCCTTCTTCCTGAAACACT+AGG | - | chr7.1:5727651-5727670 | None:intergenic | 45.0% | |
| TCAAATGCATCTACACCACC+TGG | - | chr7.1:5729335-5729354 | None:intergenic | 45.0% | |
| TTTCCTCAAAGATCAGGGAG+TGG | + | chr7.1:5730961-5730980 | MS.gene07138:CDS | 45.0% | |
| ! | GATCGGTTTACAACTCGATC+AGG | + | chr7.1:5730039-5730058 | MS.gene07138:CDS | 45.0% |
| ! | GTAGAAGTGATTTGGAGAGG+CGG | + | chr7.1:5730017-5730036 | MS.gene07138:CDS | 45.0% |
| !! | CACCAATCTAAGGGTGTTTC+TGG | - | chr7.1:5729701-5729720 | None:intergenic | 45.0% |
| AGTATTCGTGGCAGTGGAAC+TGG | + | chr7.1:5731207-5731226 | MS.gene07138:CDS | 50.0% | |
| CGCTCCGAGTCCTTAATGTT+CGG | - | chr7.1:5730757-5730776 | None:intergenic | 50.0% | |
| CTTGTAACGCGAGCATGATC+CGG | - | chr7.1:5730367-5730386 | None:intergenic | 50.0% | |
| GAAGGTCTAGTCCACAACCA+CGG | + | chr7.1:5731229-5731248 | MS.gene07138:CDS | 50.0% | |
| GCACTCGAAGGTGAATTCGT+TGG | - | chr7.1:5730088-5730107 | None:intergenic | 50.0% | |
| GCCATGCCGCACAAAATGAA+AGG | + | chr7.1:5730830-5730849 | MS.gene07138:CDS | 50.0% | |
| TCAGGGAGTGGTATAGGAAG+TGG | + | chr7.1:5730973-5730992 | MS.gene07138:CDS | 50.0% | |
| ! | AGTGATTTGGAGAGGCGGAT+CGG | + | chr7.1:5730022-5730041 | MS.gene07138:CDS | 50.0% |
| ! | GCCTTTCATTTTGTGCGGCA+TGG | - | chr7.1:5730834-5730853 | None:intergenic | 50.0% |
| ! | GGTTGATGCTCCTACTTGGA+TGG | - | chr7.1:5728698-5728717 | None:intergenic | 50.0% |
| !! | GAGCTTTGCTTTGGAGATCC+AGG | - | chr7.1:5730244-5730263 | None:intergenic | 50.0% |
| CATGCTCGCGTTACAAGCGA+CGG | + | chr7.1:5730370-5730389 | MS.gene07138:CDS | 55.0% | |
| TGAAAAGGAAACCGGGACCG+TGG | - | chr7.1:5731249-5731268 | None:intergenic | 55.0% | |
| TGCATCTACACCACCTGGCA+CGG | - | chr7.1:5729330-5729349 | None:intergenic | 55.0% | |
| TTCGTGGCAGTGGAACTGGA+AGG | + | chr7.1:5731211-5731230 | MS.gene07138:CDS | 55.0% | |
| ACGGTCGGAAGACTTACGCG+CGG | - | chr7.1:5729311-5729330 | None:intergenic | 60.0% | |
| ATCAGTGTGTCGCGGCAGCA+AGG | - | chr7.1:5730649-5730668 | None:intergenic | 60.0% | |
| CTAGTCCACAACCACGGTCC+CGG | + | chr7.1:5731235-5731254 | MS.gene07138:CDS | 60.0% | |
| GTAAGTCTTCCGACCGTGCC+AGG | + | chr7.1:5729314-5729333 | MS.gene07138:CDS | 60.0% | |
| TCTACACCACCTGGCACGGT+CGG | - | chr7.1:5729326-5729345 | None:intergenic | 60.0% | |
| AGTCTTCCGACCGTGCCAGG+TGG | + | chr7.1:5729317-5729336 | MS.gene07138:CDS | 65.0% | |
| GGAAACCGGGACCGTGGTTG+TGG | - | chr7.1:5731243-5731262 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 5727618 | 5731277 | 5727618 | ID=MS.gene07138 |
| chr7.1 | mRNA | 5727618 | 5731277 | 5727618 | ID=MS.gene07138.t1;Parent=MS.gene07138 |
| chr7.1 | exon | 5727618 | 5727709 | 5727618 | ID=MS.gene07138.t1.exon1;Parent=MS.gene07138.t1 |
| chr7.1 | CDS | 5727618 | 5727709 | 5727618 | ID=cds.MS.gene07138.t1;Parent=MS.gene07138.t1 |
| chr7.1 | exon | 5728666 | 5728732 | 5728666 | ID=MS.gene07138.t1.exon2;Parent=MS.gene07138.t1 |
| chr7.1 | CDS | 5728666 | 5728732 | 5728666 | ID=cds.MS.gene07138.t1;Parent=MS.gene07138.t1 |
| chr7.1 | exon | 5729242 | 5730423 | 5729242 | ID=MS.gene07138.t1.exon3;Parent=MS.gene07138.t1 |
| chr7.1 | CDS | 5729242 | 5730423 | 5729242 | ID=cds.MS.gene07138.t1;Parent=MS.gene07138.t1 |
| chr7.1 | exon | 5730748 | 5731277 | 5730748 | ID=MS.gene07138.t1.exon4;Parent=MS.gene07138.t1 |
| chr7.1 | CDS | 5730748 | 5731277 | 5730748 | ID=cds.MS.gene07138.t1;Parent=MS.gene07138.t1 |
| Gene Sequence |
| Protein sequence |
