Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07218.t1 | XP_003591526.3 | 92.9 | 197 | 14 | 0 | 1 | 197 | 1 | 197 | 1.40E-95 | 359 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07218.t1 | O22244 | 48.4 | 161 | 80 | 2 | 33 | 191 | 49 | 208 | 6.5e-33 | 142.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07218.t1 | A0A396JYB9 | 92.9 | 197 | 14 | 0 | 1 | 197 | 1 | 197 | 1.0e-95 | 359.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050400 | MS.gene07218 | 0.810092 | 1.37E-50 | -1.69E-46 |
MS.gene050670 | MS.gene07218 | 0.826179 | 3.13E-54 | -1.69E-46 |
MS.gene05105 | MS.gene07218 | 0.805796 | 1.12E-49 | -1.69E-46 |
MS.gene051360 | MS.gene07218 | 0.800948 | 1.13E-48 | -1.69E-46 |
MS.gene051525 | MS.gene07218 | 0.835876 | 1.30E-56 | -1.69E-46 |
MS.gene052188 | MS.gene07218 | 0.823939 | 1.06E-53 | -1.69E-46 |
MS.gene052253 | MS.gene07218 | 0.816658 | 4.94E-52 | -1.69E-46 |
MS.gene052340 | MS.gene07218 | 0.81074 | 9.92E-51 | -1.69E-46 |
MS.gene053169 | MS.gene07218 | 0.820123 | 8.10E-53 | -1.69E-46 |
MS.gene053758 | MS.gene07218 | 0.803668 | 3.12E-49 | -1.69E-46 |
MS.gene054349 | MS.gene07218 | 0.809978 | 1.45E-50 | -1.69E-46 |
MS.gene054556 | MS.gene07218 | 0.830369 | 3.05E-55 | -1.69E-46 |
MS.gene055116 | MS.gene07218 | 0.831973 | 1.23E-55 | -1.69E-46 |
MS.gene05553 | MS.gene07218 | 0.815983 | 6.99E-52 | -1.69E-46 |
MS.gene055909 | MS.gene07218 | 0.806193 | 9.26E-50 | -1.69E-46 |
MS.gene055911 | MS.gene07218 | 0.807852 | 4.13E-50 | -1.69E-46 |
MS.gene057749 | MS.gene07218 | 0.826718 | 2.33E-54 | -1.69E-46 |
MS.gene057823 | MS.gene07218 | 0.818544 | 1.85E-52 | -1.69E-46 |
MS.gene057825 | MS.gene07218 | 0.820147 | 8.00E-53 | -1.69E-46 |
MS.gene058002 | MS.gene07218 | 0.805309 | 1.42E-49 | -1.69E-46 |
MS.gene058007 | MS.gene07218 | 0.847856 | 8.88E-60 | -1.69E-46 |
MS.gene058444 | MS.gene07218 | 0.808206 | 3.47E-50 | -1.69E-46 |
MS.gene058700 | MS.gene07218 | 0.827175 | 1.81E-54 | -1.69E-46 |
MS.gene05907 | MS.gene07218 | 0.815018 | 1.15E-51 | -1.69E-46 |
MS.gene059082 | MS.gene07218 | 0.812819 | 3.50E-51 | -1.69E-46 |
MS.gene059420 | MS.gene07218 | 0.814002 | 1.92E-51 | -1.69E-46 |
MS.gene059462 | MS.gene07218 | 0.816912 | 4.33E-52 | -1.69E-46 |
MS.gene059688 | MS.gene07218 | 0.829345 | 5.42E-55 | -1.69E-46 |
MS.gene059692 | MS.gene07218 | 0.815088 | 1.11E-51 | -1.69E-46 |
MS.gene059695 | MS.gene07218 | 0.81097 | 8.84E-51 | -1.69E-46 |
MS.gene060403 | MS.gene07218 | 0.819266 | 1.27E-52 | -1.69E-46 |
MS.gene061154 | MS.gene07218 | 0.807097 | 5.97E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07218.t1 | MTR_1g088540 | 93.333 | 150 | 10 | 0 | 48 | 197 | 2 | 151 | 1.37e-99 | 285 |
MS.gene07218.t1 | MTR_7g108790 | 68.927 | 177 | 53 | 1 | 22 | 196 | 21 | 197 | 2.69e-88 | 258 |
MS.gene07218.t1 | MTR_4g120825 | 35.437 | 206 | 118 | 4 | 1 | 191 | 1 | 206 | 5.68e-36 | 125 |
MS.gene07218.t1 | MTR_4g120830 | 35.437 | 206 | 118 | 4 | 1 | 191 | 1 | 206 | 9.23e-36 | 124 |
MS.gene07218.t1 | MTR_4g035880 | 35.789 | 190 | 105 | 3 | 11 | 189 | 12 | 195 | 6.74e-34 | 119 |
MS.gene07218.t1 | MTR_8g104765 | 34.419 | 215 | 117 | 5 | 1 | 191 | 1 | 215 | 1.07e-33 | 119 |
MS.gene07218.t1 | MTR_4g035905 | 34.715 | 193 | 109 | 4 | 8 | 189 | 9 | 195 | 1.02e-32 | 116 |
MS.gene07218.t1 | MTR_4g035870 | 34.715 | 193 | 109 | 3 | 8 | 189 | 9 | 195 | 1.82e-32 | 115 |
MS.gene07218.t1 | MTR_2g043560 | 39.181 | 171 | 92 | 4 | 27 | 192 | 29 | 192 | 1.05e-28 | 106 |
MS.gene07218.t1 | MTR_3g008840 | 31.875 | 160 | 105 | 2 | 33 | 188 | 26 | 185 | 4.94e-28 | 104 |
MS.gene07218.t1 | MTR_5g012000 | 30.811 | 185 | 120 | 3 | 10 | 189 | 29 | 210 | 6.28e-27 | 102 |
MS.gene07218.t1 | MTR_3g008820 | 30.000 | 160 | 108 | 2 | 33 | 188 | 25 | 184 | 2.81e-26 | 99.8 |
MS.gene07218.t1 | MTR_4g124855 | 30.159 | 189 | 120 | 5 | 7 | 186 | 11 | 196 | 5.40e-22 | 89.4 |
MS.gene07218.t1 | MTR_4g101760 | 26.000 | 200 | 136 | 4 | 1 | 188 | 1 | 200 | 7.96e-21 | 85.9 |
MS.gene07218.t1 | MTR_4g025610 | 30.769 | 169 | 102 | 4 | 33 | 188 | 33 | 199 | 4.26e-20 | 84.3 |
MS.gene07218.t1 | MTR_4g025590 | 30.769 | 169 | 102 | 4 | 33 | 188 | 4 | 170 | 9.33e-20 | 82.8 |
MS.gene07218.t1 | MTR_4g025550 | 29.592 | 196 | 120 | 6 | 8 | 188 | 7 | 199 | 2.18e-19 | 82.4 |
MS.gene07218.t1 | MTR_4g025620 | 27.411 | 197 | 126 | 5 | 5 | 188 | 7 | 199 | 7.32e-18 | 78.6 |
MS.gene07218.t1 | MTR_3g008760 | 26.415 | 159 | 110 | 4 | 33 | 185 | 67 | 224 | 1.62e-16 | 75.1 |
MS.gene07218.t1 | MTR_0036s0140 | 28.652 | 178 | 115 | 5 | 8 | 183 | 54 | 221 | 1.37e-14 | 70.1 |
MS.gene07218.t1 | MTR_8g023150 | 29.193 | 161 | 103 | 3 | 32 | 186 | 76 | 231 | 3.32e-14 | 70.5 |
MS.gene07218.t1 | MTR_4g035855 | 28.750 | 160 | 108 | 3 | 33 | 187 | 44 | 202 | 4.24e-14 | 68.2 |
MS.gene07218.t1 | MTR_4g120290 | 27.950 | 161 | 110 | 2 | 28 | 187 | 54 | 209 | 1.12e-13 | 68.9 |
MS.gene07218.t1 | MTR_7g112580 | 26.943 | 193 | 124 | 5 | 8 | 186 | 5 | 194 | 1.60e-13 | 68.6 |
MS.gene07218.t1 | MTR_8g023310 | 30.818 | 159 | 105 | 3 | 33 | 186 | 68 | 226 | 2.78e-13 | 67.8 |
MS.gene07218.t1 | MTR_1g083470 | 28.571 | 161 | 107 | 3 | 33 | 189 | 58 | 214 | 4.69e-13 | 67.4 |
MS.gene07218.t1 | MTR_1g083500 | 28.571 | 161 | 107 | 3 | 33 | 189 | 58 | 214 | 4.69e-13 | 67.4 |
MS.gene07218.t1 | MTR_7g112590 | 24.204 | 157 | 117 | 2 | 33 | 189 | 59 | 213 | 9.05e-12 | 63.5 |
MS.gene07218.t1 | MTR_4g120280 | 26.875 | 160 | 113 | 1 | 28 | 187 | 54 | 209 | 1.21e-11 | 63.2 |
MS.gene07218.t1 | MTR_1g008140 | 27.168 | 173 | 113 | 3 | 22 | 182 | 71 | 242 | 1.67e-11 | 62.8 |
MS.gene07218.t1 | MTR_8g042900 | 26.667 | 165 | 110 | 4 | 33 | 189 | 76 | 237 | 2.09e-11 | 62.4 |
MS.gene07218.t1 | MTR_2g436040 | 25.301 | 166 | 108 | 4 | 28 | 186 | 38 | 194 | 2.93e-11 | 62.0 |
MS.gene07218.t1 | MTR_4g124550 | 36.170 | 94 | 58 | 1 | 95 | 188 | 142 | 233 | 4.13e-11 | 61.6 |
MS.gene07218.t1 | MTR_7g108905 | 27.673 | 159 | 105 | 2 | 34 | 186 | 46 | 200 | 7.44e-11 | 60.8 |
MS.gene07218.t1 | MTR_1g083510 | 25.000 | 156 | 113 | 3 | 33 | 187 | 56 | 208 | 9.13e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07218.t1 | AT3G62820 | 47.619 | 189 | 95 | 2 | 6 | 191 | 7 | 194 | 1.41e-56 | 177 |
MS.gene07218.t1 | AT2G47670 | 48.447 | 161 | 80 | 2 | 33 | 191 | 49 | 208 | 2.24e-38 | 131 |
MS.gene07218.t1 | AT5G20740 | 35.979 | 189 | 112 | 3 | 10 | 189 | 8 | 196 | 6.75e-31 | 112 |
MS.gene07218.t1 | AT5G20740 | 35.979 | 189 | 112 | 3 | 10 | 189 | 42 | 230 | 1.91e-30 | 112 |
MS.gene07218.t1 | AT4G12390 | 37.736 | 159 | 92 | 2 | 36 | 187 | 43 | 201 | 1.38e-29 | 108 |
MS.gene07218.t1 | AT1G62760 | 33.951 | 162 | 104 | 1 | 31 | 189 | 146 | 307 | 1.74e-29 | 111 |
MS.gene07218.t1 | AT5G62360 | 35.443 | 158 | 99 | 2 | 33 | 188 | 44 | 200 | 4.02e-29 | 107 |
MS.gene07218.t1 | AT5G62350 | 34.356 | 163 | 101 | 2 | 33 | 189 | 39 | 201 | 4.23e-29 | 107 |
MS.gene07218.t1 | AT1G14890 | 32.474 | 194 | 113 | 4 | 10 | 190 | 30 | 218 | 3.03e-27 | 103 |
MS.gene07218.t1 | AT2G01610 | 34.444 | 180 | 96 | 4 | 31 | 190 | 43 | 220 | 6.36e-27 | 102 |
MS.gene07218.t1 | AT4G25260 | 30.256 | 195 | 120 | 5 | 10 | 188 | 5 | 199 | 1.13e-26 | 101 |
MS.gene07218.t1 | AT3G47380 | 34.783 | 161 | 99 | 2 | 33 | 187 | 39 | 199 | 5.43e-26 | 99.4 |
MS.gene07218.t1 | AT1G70720 | 33.505 | 194 | 115 | 4 | 8 | 191 | 9 | 198 | 5.88e-25 | 96.7 |
MS.gene07218.t1 | AT1G70720 | 33.505 | 194 | 115 | 4 | 8 | 191 | 21 | 210 | 6.12e-25 | 97.1 |
MS.gene07218.t1 | AT1G23205 | 34.737 | 190 | 111 | 4 | 8 | 185 | 10 | 198 | 2.15e-24 | 95.5 |
MS.gene07218.t1 | AT1G62770 | 31.250 | 160 | 102 | 4 | 36 | 187 | 37 | 196 | 3.28e-23 | 92.4 |
MS.gene07218.t1 | AT4G25250 | 30.128 | 156 | 104 | 4 | 33 | 183 | 38 | 193 | 9.58e-19 | 80.5 |
MS.gene07218.t1 | AT3G14310 | 33.333 | 168 | 106 | 4 | 33 | 195 | 59 | 225 | 7.06e-18 | 81.3 |
MS.gene07218.t1 | AT5G51520 | 24.752 | 202 | 132 | 5 | 5 | 186 | 1 | 202 | 1.85e-16 | 74.7 |
MS.gene07218.t1 | AT4G00080 | 30.723 | 166 | 103 | 5 | 30 | 184 | 33 | 197 | 4.36e-15 | 70.9 |
MS.gene07218.t1 | AT1G53840 | 29.143 | 175 | 109 | 5 | 32 | 196 | 72 | 241 | 1.79e-14 | 71.6 |
MS.gene07218.t1 | AT1G53830 | 29.940 | 167 | 113 | 3 | 33 | 195 | 62 | 228 | 9.47e-14 | 69.3 |
MS.gene07218.t1 | AT5G04960 | 30.120 | 166 | 99 | 4 | 32 | 196 | 67 | 216 | 1.31e-13 | 68.9 |
MS.gene07218.t1 | AT4G15980 | 27.815 | 151 | 105 | 2 | 37 | 186 | 52 | 199 | 2.12e-13 | 68.6 |
MS.gene07218.t1 | AT4G15980 | 27.815 | 151 | 105 | 2 | 37 | 186 | 62 | 209 | 2.41e-13 | 68.2 |
MS.gene07218.t1 | AT3G05610 | 25.806 | 155 | 113 | 2 | 33 | 187 | 58 | 210 | 5.97e-13 | 67.0 |
MS.gene07218.t1 | AT3G14300 | 26.946 | 167 | 110 | 4 | 32 | 187 | 270 | 435 | 4.62e-12 | 64.7 |
MS.gene07218.t1 | AT5G49180 | 28.205 | 156 | 110 | 2 | 33 | 187 | 55 | 209 | 7.68e-12 | 63.9 |
MS.gene07218.t1 | AT5G27870 | 25.455 | 165 | 120 | 3 | 33 | 197 | 57 | 218 | 1.20e-11 | 63.2 |
MS.gene07218.t1 | AT3G49220 | 33.077 | 130 | 80 | 3 | 28 | 156 | 127 | 250 | 1.35e-11 | 62.8 |
MS.gene07218.t1 | AT3G49220 | 33.077 | 130 | 80 | 3 | 28 | 156 | 127 | 250 | 3.02e-11 | 62.0 |
MS.gene07218.t1 | AT3G05620 | 25.434 | 173 | 112 | 4 | 30 | 186 | 30 | 201 | 4.02e-11 | 61.6 |
MS.gene07218.t1 | AT3G49220 | 33.077 | 130 | 80 | 3 | 28 | 156 | 82 | 205 | 4.99e-11 | 61.2 |
Find 38 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAAGAGCTAGAGCGTTAC+TGG | 0.280918 | 1.4:+70290556 | None:intergenic |
GATCAAGATACTTGCCTTGA+TGG | 0.282001 | 1.4:-70290647 | MS.gene07218:CDS |
CCAGCCCTTGCCCACTTGCT+AGG | 0.314770 | 1.4:+70290902 | None:intergenic |
CTGCACTTATCCATGTATTA+AGG | 0.338152 | 1.4:+70290678 | None:intergenic |
AGCGTTACTGGTTATATAAT+AGG | 0.353010 | 1.4:+70290568 | None:intergenic |
ACTTGCCTTGATGGATTTCA+AGG | 0.400968 | 1.4:-70290638 | MS.gene07218:CDS |
CAGCCCTTGCCCACTTGCTA+GGG | 0.415413 | 1.4:+70290903 | None:intergenic |
AGTCAGTTGGTATTTGCAAA+AGG | 0.416317 | 1.4:-70291019 | MS.gene07218:CDS |
ACTAGACACGGGCATTTAAG+AGG | 0.436602 | 1.4:-70290824 | MS.gene07218:CDS |
CCTAGCAAGTGGGCAAGGGC+TGG | 0.454457 | 1.4:-70290902 | MS.gene07218:CDS |
GTTAATAAACTTGCCACTAC+AGG | 0.455754 | 1.4:-70290536 | MS.gene07218:CDS |
ACCAACTGACTTGCAAGGTA+TGG | 0.470021 | 1.4:+70291031 | None:intergenic |
TTAAGTTTGCGAGATATGCT+TGG | 0.470762 | 1.4:+70290846 | None:intergenic |
AGGCTAAGTAGAACGACATT+TGG | 0.472627 | 1.4:-70290716 | MS.gene07218:CDS |
ACGACATTTGGTACCCAGAT+GGG | 0.493858 | 1.4:-70290704 | MS.gene07218:CDS |
GAAGCCCTAGCAAGTGGGCA+AGG | 0.500888 | 1.4:-70290907 | MS.gene07218:CDS |
GTCAGTTGGTATTTGCAAAA+GGG | 0.511286 | 1.4:-70291018 | MS.gene07218:CDS |
CTCGCAAACTTAACTAGACA+CGG | 0.515036 | 1.4:-70290836 | MS.gene07218:CDS |
GAGAAGCTTGCAAAGTAACT+AGG | 0.515953 | 1.4:-70290982 | MS.gene07218:CDS |
TCCATACCTTGCAAGTCAGT+TGG | 0.518339 | 1.4:-70291032 | MS.gene07218:CDS |
AAACTTGCCACTACAGGTCT+AGG | 0.519005 | 1.4:-70290530 | MS.gene07218:CDS |
GCACCGTTCTCTAACAGTGC+TGG | 0.521547 | 1.4:-70290932 | MS.gene07218:CDS |
GTGATCTATGAAGCTCATCA+AGG | 0.523992 | 1.4:+70290753 | None:intergenic |
GATCACTGAATGTGCTCAGA+AGG | 0.546424 | 1.4:-70290736 | MS.gene07218:CDS |
GCTGGAGTGTCAGTGACAAT+CGG | 0.557488 | 1.4:-70290884 | MS.gene07218:CDS |
CAAATACCAACTGACTTGCA+AGG | 0.559475 | 1.4:+70291026 | None:intergenic |
AACGACATTTGGTACCCAGA+TGG | 0.584170 | 1.4:-70290705 | MS.gene07218:CDS |
CGACATTTGGTACCCAGATG+GGG | 0.585386 | 1.4:-70290703 | MS.gene07218:CDS |
TGATCTATGAAGCTCATCAA+GGG | 0.595202 | 1.4:+70290754 | None:intergenic |
CTGGAAGAAGCCCTAGCAAG+TGG | 0.599584 | 1.4:-70290913 | MS.gene07218:CDS |
CTTCCAGCACTGTTAGAGAA+CGG | 0.607318 | 1.4:+70290929 | None:intergenic |
AAGCCCTAGCAAGTGGGCAA+GGG | 0.611205 | 1.4:-70290906 | MS.gene07218:CDS |
GATGCTTCCTAGACCTGTAG+TGG | 0.614161 | 1.4:+70290523 | None:intergenic |
GTGCTAGCGAGCGCGTACAA+AGG | 0.625584 | 1.4:+70290951 | None:intergenic |
TAAATGCAAGCAGAAAGGTA+AGG | 0.639842 | 1.4:+70291062 | None:intergenic |
GACATTTGGTACCCAGATGG+GGG | 0.662357 | 1.4:-70290702 | MS.gene07218:CDS |
TGGAAGAAGCCCTAGCAAGT+GGG | 0.667217 | 1.4:-70290912 | MS.gene07218:CDS |
TCGCAAACTTAACTAGACAC+GGG | 0.670532 | 1.4:-70290835 | MS.gene07218:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAAAATAAATGCAAGCAGAA+AGG | + | chr1.4:70290539-70290558 | None:intergenic | 25.0% |
! | AGCGTTACTGGTTATATAAT+AGG | + | chr1.4:70291028-70291047 | None:intergenic | 30.0% |
CTGCACTTATCCATGTATTA+AGG | + | chr1.4:70290918-70290937 | None:intergenic | 35.0% | |
GATTTCAAGGCAAAAACAGT+AGG | - | chr1.4:70290968-70290987 | MS.gene07218:CDS | 35.0% | |
GTTAATAAACTTGCCACTAC+AGG | - | chr1.4:70291057-70291076 | MS.gene07218:CDS | 35.0% | |
TAAATGCAAGCAGAAAGGTA+AGG | + | chr1.4:70290534-70290553 | None:intergenic | 35.0% | |
TGATCTATGAAGCTCATCAA+GGG | + | chr1.4:70290842-70290861 | None:intergenic | 35.0% | |
TTAAGTTTGCGAGATATGCT+TGG | + | chr1.4:70290750-70290769 | None:intergenic | 35.0% | |
! | AGTCAGTTGGTATTTGCAAA+AGG | - | chr1.4:70290574-70290593 | MS.gene07218:CDS | 35.0% |
! | GTCAGTTGGTATTTGCAAAA+GGG | - | chr1.4:70290575-70290594 | MS.gene07218:CDS | 35.0% |
! | TTTTGCCTTGAAATCCATCA+AGG | + | chr1.4:70290963-70290982 | None:intergenic | 35.0% |
AGGCTAAGTAGAACGACATT+TGG | - | chr1.4:70290877-70290896 | MS.gene07218:CDS | 40.0% | |
CTCGCAAACTTAACTAGACA+CGG | - | chr1.4:70290757-70290776 | MS.gene07218:CDS | 40.0% | |
GAGAAGCTTGCAAAGTAACT+AGG | - | chr1.4:70290611-70290630 | MS.gene07218:CDS | 40.0% | |
GATCAAGATACTTGCCTTGA+TGG | - | chr1.4:70290946-70290965 | MS.gene07218:CDS | 40.0% | |
GTGATCTATGAAGCTCATCA+AGG | + | chr1.4:70290843-70290862 | None:intergenic | 40.0% | |
TCGCAAACTTAACTAGACAC+GGG | - | chr1.4:70290758-70290777 | MS.gene07218:CDS | 40.0% | |
!! | ACTTGCCTTGATGGATTTCA+AGG | - | chr1.4:70290955-70290974 | MS.gene07218:CDS | 40.0% |
!! | CAAATACCAACTGACTTGCA+AGG | + | chr1.4:70290570-70290589 | None:intergenic | 40.0% |
AAACTTGCCACTACAGGTCT+AGG | - | chr1.4:70291063-70291082 | MS.gene07218:CDS | 45.0% | |
AACGACATTTGGTACCCAGA+TGG | - | chr1.4:70290888-70290907 | MS.gene07218:CDS | 45.0% | |
ACGACATTTGGTACCCAGAT+GGG | - | chr1.4:70290889-70290908 | MS.gene07218:CDS | 45.0% | |
ACTAGACACGGGCATTTAAG+AGG | - | chr1.4:70290769-70290788 | MS.gene07218:CDS | 45.0% | |
AGATGGGGGACCTTAATACA+TGG | - | chr1.4:70290905-70290924 | MS.gene07218:CDS | 45.0% | |
ATGTATTAAGGTCCCCCATC+TGG | + | chr1.4:70290906-70290925 | None:intergenic | 45.0% | |
CTTCCAGCACTGTTAGAGAA+CGG | + | chr1.4:70290667-70290686 | None:intergenic | 45.0% | |
GATCACTGAATGTGCTCAGA+AGG | - | chr1.4:70290857-70290876 | MS.gene07218:CDS | 45.0% | |
TCCATACCTTGCAAGTCAGT+TGG | - | chr1.4:70290561-70290580 | MS.gene07218:CDS | 45.0% | |
TGTATTAAGGTCCCCCATCT+GGG | + | chr1.4:70290905-70290924 | None:intergenic | 45.0% | |
! | AACAAGAGCTAGAGCGTTAC+TGG | + | chr1.4:70291040-70291059 | None:intergenic | 45.0% |
!! | ACCAACTGACTTGCAAGGTA+TGG | + | chr1.4:70290565-70290584 | None:intergenic | 45.0% |
CGACATTTGGTACCCAGATG+GGG | - | chr1.4:70290890-70290909 | MS.gene07218:CDS | 50.0% | |
GACATTTGGTACCCAGATGG+GGG | - | chr1.4:70290891-70290910 | MS.gene07218:CDS | 50.0% | |
GATGCTTCCTAGACCTGTAG+TGG | + | chr1.4:70291073-70291092 | None:intergenic | 50.0% | |
TGGAAGAAGCCCTAGCAAGT+GGG | - | chr1.4:70290681-70290700 | MS.gene07218:CDS | 50.0% | |
! | GCTGGAGTGTCAGTGACAAT+CGG | - | chr1.4:70290709-70290728 | MS.gene07218:CDS | 50.0% |
AAGCCCTAGCAAGTGGGCAA+GGG | - | chr1.4:70290687-70290706 | MS.gene07218:CDS | 55.0% | |
CTGGAAGAAGCCCTAGCAAG+TGG | - | chr1.4:70290680-70290699 | MS.gene07218:CDS | 55.0% | |
GCACCGTTCTCTAACAGTGC+TGG | - | chr1.4:70290661-70290680 | MS.gene07218:CDS | 55.0% | |
GAAGCCCTAGCAAGTGGGCA+AGG | - | chr1.4:70290686-70290705 | MS.gene07218:CDS | 60.0% | |
GTGCTAGCGAGCGCGTACAA+AGG | + | chr1.4:70290645-70290664 | None:intergenic | 60.0% | |
! | CAGCCCTTGCCCACTTGCTA+GGG | + | chr1.4:70290693-70290712 | None:intergenic | 60.0% |
CCAGCCCTTGCCCACTTGCT+AGG | + | chr1.4:70290694-70290713 | None:intergenic | 65.0% | |
CCTAGCAAGTGGGCAAGGGC+TGG | - | chr1.4:70290691-70290710 | MS.gene07218:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 70290511 | 70291104 | 70290511 | ID=MS.gene07218 |
chr1.4 | mRNA | 70290511 | 70291104 | 70290511 | ID=MS.gene07218.t1;Parent=MS.gene07218 |
chr1.4 | exon | 70290511 | 70291104 | 70290511 | ID=MS.gene07218.t1.exon1;Parent=MS.gene07218.t1 |
chr1.4 | CDS | 70290511 | 70291104 | 70290511 | ID=cds.MS.gene07218.t1;Parent=MS.gene07218.t1 |
Gene Sequence |
Protein sequence |