Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072668.t1 | XP_003626016.1 | 98.9 | 372 | 4 | 0 | 1 | 372 | 1 | 372 | 2.10E-217 | 764.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072668.t1 | Q9LHQ7 | 81.0 | 368 | 70 | 0 | 1 | 368 | 1 | 368 | 3.1e-177 | 622.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072668.t1 | G7KTQ4 | 98.9 | 372 | 4 | 0 | 1 | 372 | 1 | 372 | 1.5e-217 | 764.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene072668 | 0.811657 | 6.27E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene072668 | 0.801947 | 7.08E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene072668 | 0.810257 | 1.26E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene072668 | 0.80257 | 5.27E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene072668 | 0.815745 | 7.90E-52 | -1.69E-46 |
| MS.gene051210 | MS.gene072668 | 0.808985 | 2.37E-50 | -1.69E-46 |
| MS.gene051574 | MS.gene072668 | 0.80003 | 1.75E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene072668 | 0.821247 | 4.47E-53 | -1.69E-46 |
| MS.gene051935 | MS.gene072668 | 0.822952 | 1.80E-53 | -1.69E-46 |
| MS.gene052333 | MS.gene072668 | 0.80165 | 8.15E-49 | -1.69E-46 |
| MS.gene052384 | MS.gene072668 | 0.80256 | 5.29E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene072668 | 0.804104 | 2.53E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene072668 | 0.802851 | 4.61E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene072668 | 0.805754 | 1.15E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene072668 | 0.828459 | 8.88E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene072668 | 0.807695 | 4.46E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene072668 | 0.804827 | 1.79E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene072668 | 0.802872 | 4.56E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene072668 | 0.823537 | 1.31E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene072668 | 0.807244 | 5.56E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene072668 | 0.802821 | 4.68E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene072668 | 0.840616 | 7.81E-58 | -1.69E-46 |
| MS.gene056366 | MS.gene072668 | 0.81139 | 7.17E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene072668 | 0.819914 | 9.04E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene072668 | 0.804553 | 2.04E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene072668 | 0.809565 | 1.78E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene072668 | 0.802159 | 6.40E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene072668 | 0.804969 | 1.67E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene072668 | 0.804201 | 2.42E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene072668 | 0.806981 | 6.32E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene072668 | 0.804269 | 2.34E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072668.t1 | MTR_7g110030 | 98.925 | 372 | 4 | 0 | 1 | 372 | 1 | 372 | 0.0 | 770 |
| MS.gene072668.t1 | MTR_6g003920 | 97.849 | 372 | 8 | 0 | 1 | 372 | 1 | 372 | 0.0 | 760 |
| MS.gene072668.t1 | MTR_6g003920 | 98.235 | 340 | 6 | 0 | 1 | 340 | 1 | 340 | 0.0 | 696 |
| MS.gene072668.t1 | MTR_3g091140 | 26.144 | 306 | 195 | 9 | 51 | 340 | 3 | 293 | 1.39e-19 | 89.4 |
| MS.gene072668.t1 | MTR_3g014120 | 63.158 | 57 | 19 | 2 | 269 | 324 | 5 | 60 | 8.24e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072668.t1 | AT3G20650 | 80.978 | 368 | 70 | 0 | 1 | 368 | 1 | 368 | 0.0 | 612 |
| MS.gene072668.t1 | AT3G20650 | 80.707 | 368 | 70 | 1 | 1 | 368 | 1 | 367 | 0.0 | 607 |
| MS.gene072668.t1 | AT3G20650 | 84.118 | 340 | 54 | 0 | 1 | 340 | 1 | 340 | 0.0 | 586 |
| MS.gene072668.t1 | AT3G52210 | 27.431 | 288 | 177 | 10 | 68 | 340 | 15 | 285 | 1.48e-19 | 89.4 |
| MS.gene072668.t1 | AT3G52210 | 26.736 | 288 | 180 | 9 | 68 | 340 | 15 | 286 | 1.54e-18 | 86.3 |
| MS.gene072668.t1 | AT3G52210 | 32.450 | 151 | 94 | 3 | 68 | 218 | 15 | 157 | 9.35e-18 | 82.4 |
Find 94 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGAAGAAACTTAATAAT+TGG | 0.129375 | 7.3:-5055639 | MS.gene072668:CDS |
| AGTTTCTTCAAATGAATTAT+TGG | 0.177285 | 7.3:+5055649 | None:intergenic |
| ACCAACATAATATCCAATTT+TGG | 0.220790 | 7.3:+5055346 | None:intergenic |
| AACACCTTCTCTAAGCTTCT+TGG | 0.241869 | 7.3:+5053675 | None:intergenic |
| AAATGGGACAAGGCCAAAAT+TGG | 0.260483 | 7.3:-5055359 | MS.gene072668:CDS |
| GACTAGCTTCTCGTTCTTCC+AGG | 0.267975 | 7.3:+5055671 | None:intergenic |
| ATGCGAAGACTTGGTGCGTT+GGG | 0.316748 | 7.3:-5051740 | MS.gene072668:CDS |
| TTTAGGTGATGAAAATTTCC+TGG | 0.352993 | 7.3:-5055761 | MS.gene072668:intron |
| TTTAAATCATCCTGCCCCTT+TGG | 0.356397 | 7.3:-5053341 | MS.gene072668:CDS |
| TTTGAAGAAACTTAATAATT+GGG | 0.358273 | 7.3:-5055638 | MS.gene072668:intron |
| CTTCTCGTTCTTCCAGGGTC+TGG | 0.389405 | 7.3:+5055677 | None:intergenic |
| AAATGGTTATACCTTGATCT+TGG | 0.389460 | 7.3:+5051708 | None:intergenic |
| TTGGTAATCACATTGGCATC+TGG | 0.392108 | 7.3:+5053694 | None:intergenic |
| GCAGCTGAAGGGTTGACCTT+TGG | 0.421180 | 7.3:-5053496 | MS.gene072668:intron |
| AATTAAGTACACGTTCCATT+TGG | 0.422700 | 7.3:-5053318 | MS.gene072668:CDS |
| GTAATAGTGTCTACTCGGTT+TGG | 0.442269 | 7.3:-5053474 | MS.gene072668:CDS |
| GGACACTATCGGCTGATGAA+TGG | 0.445211 | 7.3:-5051472 | MS.gene072668:CDS |
| AATGATTTGAATACGTGAAA+GGG | 0.449246 | 7.3:+5051954 | None:intergenic |
| CATAACAATCTCCACATAAG+AGG | 0.449338 | 7.3:+5054842 | None:intergenic |
| GACACTATCGGCTGATGAAT+GGG | 0.449468 | 7.3:-5051471 | MS.gene072668:CDS |
| GAATCTCCTTCAAGCTCATT+CGG | 0.450708 | 7.3:-5056201 | MS.gene072668:CDS |
| TATGAAACGAAGCGAATTTG+TGG | 0.451572 | 7.3:-5051768 | MS.gene072668:CDS |
| GTCGGCATCACCATTGTAAC+GGG | 0.454883 | 7.3:+5054903 | None:intergenic |
| TATGTCATTTGTATTGAGAA+AGG | 0.459265 | 7.3:-5051432 | MS.gene072668:intron |
| GTTCCGATGAAAACGCCTCC+TGG | 0.462802 | 7.3:+5053721 | None:intergenic |
| TGAAAGGGGACAATCCATTC+AGG | 0.468444 | 7.3:+5051969 | None:intergenic |
| TCTTTGTGCTTTCATCCTCC+AGG | 0.469364 | 7.3:+5055743 | None:intergenic |
| AGGGTGGTGATCTTATCAAA+TGG | 0.469444 | 7.3:-5055376 | MS.gene072668:CDS |
| CTTTGGTAATAGTGTCTACT+CGG | 0.473784 | 7.3:-5053479 | MS.gene072668:CDS |
| GCCAAAATTGGATATTATGT+TGG | 0.475736 | 7.3:-5055347 | MS.gene072668:CDS |
| TCGAGGGTTGATGCATATTA+CGG | 0.477216 | 7.3:-5051274 | MS.gene072668:CDS |
| CATGCGAAGACTTGGTGCGT+TGG | 0.480008 | 7.3:-5051741 | MS.gene072668:CDS |
| AGTTTGCATTGCATTACTCC+TGG | 0.484761 | 7.3:-5053798 | MS.gene072668:CDS |
| GAGGAAGACATAACGTATAT+CGG | 0.489287 | 7.3:-5051252 | MS.gene072668:CDS |
| ACTTCTTACGTCGCTGATGA+TGG | 0.490858 | 7.3:+5054881 | None:intergenic |
| TTTCCTGCTCGCCTCTTATG+TGG | 0.496614 | 7.3:-5054853 | MS.gene072668:CDS |
| AAAGAAACCATACCTCCAAA+TGG | 0.497899 | 7.3:+5053303 | None:intergenic |
| TTTACAATTTCAGGTTCGCT+TGG | 0.500503 | 7.3:-5054320 | MS.gene072668:intron |
| AACGTGTACTTAATTCCAAA+GGG | 0.507617 | 7.3:+5053326 | None:intergenic |
| ATACCTTGAGAATTATGTCT+AGG | 0.509978 | 7.3:+5056162 | None:intergenic |
| TCGTTCTTCCAGGGTCTGGT+TGG | 0.518995 | 7.3:+5055681 | None:intergenic |
| ATTCAAATCATTAGCTGAAG+AGG | 0.520289 | 7.3:-5051943 | MS.gene072668:intron |
| GGGTGGTGATCTTATCAAAT+GGG | 0.522492 | 7.3:-5055375 | MS.gene072668:CDS |
| TAAGTACACGTTCCATTTGG+AGG | 0.523114 | 7.3:-5053315 | MS.gene072668:intron |
| TGCGAAGACTTGGTGCGTTG+GGG | 0.524313 | 7.3:-5051739 | MS.gene072668:CDS |
| GTGTCAGCTTTACTTCGTCC+AGG | 0.525304 | 7.3:-5053739 | MS.gene072668:CDS |
| ATGAGCTTGAAGGAGATTCT+CGG | 0.525370 | 7.3:+5056205 | None:intergenic |
| TGGCAACTACAGATATCAAA+AGG | 0.525481 | 7.3:+5054274 | None:intergenic |
| GGTTGACCGAATGAGCTTGA+AGG | 0.527521 | 7.3:+5056195 | None:intergenic |
| ACGCTGTTGATTGTCCTGAA+TGG | 0.528292 | 7.3:-5051983 | MS.gene072668:CDS |
| CTTATGTGGAGATTGTTATG+AGG | 0.530502 | 7.3:-5054839 | MS.gene072668:intron |
| ACTAGCTTCTCGTTCTTCCA+GGG | 0.536828 | 7.3:+5055672 | None:intergenic |
| TTATGTCTAGGTTTAGAATG+AGG | 0.541161 | 7.3:+5056174 | None:intergenic |
| TAATGATTTGAATACGTGAA+AGG | 0.544879 | 7.3:+5051953 | None:intergenic |
| AGCACGTGCCTCTGTAGACC+AGG | 0.549830 | 7.3:+5053780 | None:intergenic |
| TCTCCACATAAGAGGCGAGC+AGG | 0.550447 | 7.3:+5054850 | None:intergenic |
| GGGGATGGCAACCAAGATCA+AGG | 0.551349 | 7.3:-5051719 | MS.gene072668:intron |
| GTACTTAATTCCAAAGGGGC+AGG | 0.552286 | 7.3:+5053331 | None:intergenic |
| GTGGACCTCATGCGAAGACT+TGG | 0.557650 | 7.3:-5051749 | MS.gene072668:CDS |
| CGCTTCGTTTCATATACTCG+TGG | 0.561057 | 7.3:+5051777 | None:intergenic |
| AAGCTTCTTGGTAATCACAT+TGG | 0.563110 | 7.3:+5053687 | None:intergenic |
| TGCAAGGTCCAACCAGACCC+TGG | 0.566903 | 7.3:-5055689 | MS.gene072668:CDS |
| GGTCGGCATCACCATTGTAA+CGG | 0.581927 | 7.3:+5054902 | None:intergenic |
| AAACCTAGACATAATTCTCA+AGG | 0.589500 | 7.3:-5056165 | MS.gene072668:intron |
| GTTGGTATTGACATTGCTGA+AGG | 0.591385 | 7.3:-5055329 | MS.gene072668:CDS |
| GAACGTGTACTTAATTCCAA+AGG | 0.596850 | 7.3:+5053325 | None:intergenic |
| TAGCTGATCATTATAGTGCA+AGG | 0.603549 | 7.3:-5055705 | MS.gene072668:CDS |
| ACTTGACCTTGCCTGTGGCA+AGG | 0.605847 | 7.3:-5055484 | MS.gene072668:intron |
| CACCTACCTTGCCACAGGCA+AGG | 0.606828 | 7.3:+5055478 | None:intergenic |
| GGTCAAGTACTGCATCTCCT+CGG | 0.609821 | 7.3:+5055499 | None:intergenic |
| CATCACCATTGTAACGGGTA+CGG | 0.610295 | 7.3:+5054908 | None:intergenic |
| GGTCTACAGAGGCACGTGCT+CGG | 0.612151 | 7.3:-5053777 | MS.gene072668:CDS |
| ATTCAACTCTATGCTTGCCG+AGG | 0.615145 | 7.3:-5055516 | MS.gene072668:CDS |
| GATTGCCGTACCCGTTACAA+TGG | 0.617871 | 7.3:-5054913 | MS.gene072668:CDS |
| ATTAACACCTACCTTGCCAC+AGG | 0.622621 | 7.3:+5055473 | None:intergenic |
| ATGATTTGAATACGTGAAAG+GGG | 0.623013 | 7.3:+5051955 | None:intergenic |
| ACGCACCAAGTCTTCGCATG+AGG | 0.633716 | 7.3:+5051744 | None:intergenic |
| CTTACGTCGCTGATGATGGT+CGG | 0.636950 | 7.3:+5054885 | None:intergenic |
| AAAGCACAAAGAATTACGCT+CGG | 0.638086 | 7.3:-5055732 | MS.gene072668:CDS |
| CGAGTAGACACTATTACCAA+AGG | 0.638473 | 7.3:+5053480 | None:intergenic |
| GCGAAGACTTGGTGCGTTGG+GGG | 0.643362 | 7.3:-5051738 | MS.gene072668:CDS |
| ATTACCAAGAAGCTTAGAGA+AGG | 0.645841 | 7.3:-5053679 | MS.gene072668:intron |
| TGATCTTATCAAATGGGACA+AGG | 0.654530 | 7.3:-5055369 | MS.gene072668:CDS |
| TCGCTTGGACAAAGTTCTCG+CGG | 0.655108 | 7.3:-5054305 | MS.gene072668:CDS |
| GTGAGTGGCAGAAAAGATCG+AGG | 0.673134 | 7.3:-5051291 | MS.gene072668:CDS |
| TGAGTGGCAGAAAAGATCGA+GGG | 0.675804 | 7.3:-5051290 | MS.gene072668:CDS |
| AGGTGATGAAAATTTCCTGG+AGG | 0.676429 | 7.3:-5055758 | MS.gene072668:CDS |
| TCAGCTTTACTTCGTCCAGG+AGG | 0.689231 | 7.3:-5053736 | MS.gene072668:CDS |
| GCAGTACTTGACCTTGCCTG+TGG | 0.689377 | 7.3:-5055489 | MS.gene072668:CDS |
| GATGTGAATATGCAGCTGAA+GGG | 0.689715 | 7.3:-5053507 | MS.gene072668:intron |
| GCATTACTCCTGGTCTACAG+AGG | 0.699463 | 7.3:-5053788 | MS.gene072668:CDS |
| AGGGTTGATGCATATTACGG+AGG | 0.716621 | 7.3:-5051271 | MS.gene072668:CDS |
| ATTGTAGGTCTTATGAAACG+AGG | 0.724380 | 7.3:-5056231 | None:intergenic |
| ACGTGTACTTAATTCCAAAG+GGG | 0.740982 | 7.3:+5053327 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATATAAAAAATAGCT+AGG | + | chr7.3:5054665-5054684 | None:intergenic | 10.0% |
| !! | ATCAAGAATATAAATATAAA+TGG | + | chr7.3:5053459-5053478 | None:intergenic | 10.0% |
| !! | GATTTATATAGTAAAAAAAT+AGG | + | chr7.3:5055001-5055020 | None:intergenic | 10.0% |
| !! | TATAAATTATTGACATATAA+CGG | + | chr7.3:5055940-5055959 | None:intergenic | 10.0% |
| !! | TTTATATAGTAAAAAAATAG+GGG | + | chr7.3:5054999-5055018 | None:intergenic | 10.0% |
| !!! | ATGATATTGATTTATTTTTT+TGG | + | chr7.3:5055247-5055266 | None:intergenic | 10.0% |
| !!! | ATTTAAAAGTTATAATTTTC+TGG | + | chr7.3:5053032-5053051 | None:intergenic | 10.0% |
| !!! | ATTTTGAAGTTTATTTTTTA+CGG | + | chr7.3:5054745-5054764 | None:intergenic | 10.0% |
| !!! | CAATATCATTAATTTATTTT+GGG | - | chr7.3:5055258-5055277 | MS.gene072668:intron | 10.0% |
| !!! | TCAATATCATTAATTTATTT+TGG | - | chr7.3:5055257-5055276 | MS.gene072668:intron | 10.0% |
| !!! | TTTATTTTAGAAACTAATTT+TGG | + | chr7.3:5054887-5054906 | None:intergenic | 10.0% |
| !! | ATTTGAAGAAACTTAATAAT+TGG | - | chr7.3:5051819-5051838 | MS.gene072668:CDS | 15.0% |
| !! | GTTATATGTCAATAATTTAT+AGG | - | chr7.3:5055939-5055958 | MS.gene072668:intron | 15.0% |
| !! | TCATAAATCAAAATAGAATT+TGG | + | chr7.3:5055098-5055117 | None:intergenic | 15.0% |
| !! | TGATGTTTAATAAAGTTTAA+TGG | + | chr7.3:5055797-5055816 | None:intergenic | 15.0% |
| !! | TTATATAGTAAAAAAATAGG+GGG | + | chr7.3:5054998-5055017 | None:intergenic | 15.0% |
| !! | TTTGAAGAAACTTAATAATT+GGG | - | chr7.3:5051820-5051839 | MS.gene072668:CDS | 15.0% |
| !!! | AAAATCTTTAATTTTATGCT+TGG | - | chr7.3:5052660-5052679 | MS.gene072668:intron | 15.0% |
| !!! | GTTGATTTGTAAAATAAAAT+AGG | - | chr7.3:5054536-5054555 | MS.gene072668:intron | 15.0% |
| !!! | TTATGAATTTTTTATTTGCT+GGG | + | chr7.3:5054714-5054733 | None:intergenic | 15.0% |
| !! | AATAATAGAATGGAAAATAC+AGG | + | chr7.3:5052317-5052336 | None:intergenic | 20.0% |
| !! | AGTTTCTTCAAATGAATTAT+TGG | + | chr7.3:5051812-5051831 | None:intergenic | 20.0% |
| !! | ATAATAGAATGGAAAATACA+GGG | + | chr7.3:5052316-5052335 | None:intergenic | 20.0% |
| !! | GATTTGTAAAATAAAATAGG+TGG | - | chr7.3:5054539-5054558 | MS.gene072668:intron | 20.0% |
| !! | GGATATTTAACAAGAAAATA+TGG | + | chr7.3:5053321-5053340 | None:intergenic | 20.0% |
| !! | GTTATGAAATGAAAATGTAA+AGG | + | chr7.3:5054692-5054711 | None:intergenic | 20.0% |
| !! | TATATAGTAAAAAAATAGGG+GGG | + | chr7.3:5054997-5055016 | None:intergenic | 20.0% |
| !!! | AACTAATTTTGGTATGTATT+CGG | + | chr7.3:5054876-5054895 | None:intergenic | 20.0% |
| !!! | AGACTTGTTAAATAATAGAA+TGG | + | chr7.3:5052327-5052346 | None:intergenic | 20.0% |
| !!! | ATTTTAGTTTTAGAAGTTGA+AGG | + | chr7.3:5055585-5055604 | None:intergenic | 20.0% |
| !!! | CATTTCTAGATAACAAATTA+CGG | - | chr7.3:5052273-5052292 | MS.gene072668:intron | 20.0% |
| !!! | CGATTTTTTCAAATTATTAC+CGG | - | chr7.3:5055885-5055904 | MS.gene072668:intron | 20.0% |
| !!! | GGCATAAGTTTTAAAAATAA+GGG | + | chr7.3:5055425-5055444 | None:intergenic | 20.0% |
| !!! | GTTATGAATTTTTTATTTGC+TGG | + | chr7.3:5054715-5054734 | None:intergenic | 20.0% |
| ! | AAAAGGTAATGTCTTAAATG+GGG | + | chr7.3:5055447-5055466 | None:intergenic | 25.0% |
| ! | AACAACTATAGTAGCAAAAA+TGG | + | chr7.3:5051337-5051356 | None:intergenic | 25.0% |
| ! | AACAATGTTTCACTAGAATT+AGG | + | chr7.3:5052452-5052471 | None:intergenic | 25.0% |
| ! | AAGTGGTTATATAAACAAAC+CGG | + | chr7.3:5052195-5052214 | None:intergenic | 25.0% |
| ! | AATCACAATGTAACTAAATG+AGG | + | chr7.3:5053898-5053917 | None:intergenic | 25.0% |
| ! | AATGATTTGAATACGTGAAA+GGG | + | chr7.3:5055507-5055526 | None:intergenic | 25.0% |
| ! | ACAAAAGGTAATGTCTTAAA+TGG | + | chr7.3:5055449-5055468 | None:intergenic | 25.0% |
| ! | ACAACTATAGTAGCAAAAAT+GGG | + | chr7.3:5051336-5051355 | None:intergenic | 25.0% |
| ! | ACAATGTTTCACTAGAATTA+GGG | + | chr7.3:5052451-5052470 | None:intergenic | 25.0% |
| ! | ACGTTTCTTTCATTTGTATT+AGG | + | chr7.3:5053415-5053434 | None:intergenic | 25.0% |
| ! | ATATAGTAAAAAAATAGGGG+GGG | + | chr7.3:5054996-5055015 | None:intergenic | 25.0% |
| ! | ATATCAAAGTTCACCTAATT+GGG | - | chr7.3:5051402-5051421 | MS.gene072668:intron | 25.0% |
| ! | CAAAAGGTAATGTCTTAAAT+GGG | + | chr7.3:5055448-5055467 | None:intergenic | 25.0% |
| ! | CATACTACAAATATGGTAAT+TGG | + | chr7.3:5051630-5051649 | None:intergenic | 25.0% |
| ! | CCAATCAGTTATGTATTATA+GGG | + | chr7.3:5054220-5054239 | None:intergenic | 25.0% |
| ! | CCTATAATACATAACTGATT+GGG | - | chr7.3:5054218-5054237 | MS.gene072668:intron | 25.0% |
| ! | CGTTTCTTTCATTTGTATTA+GGG | + | chr7.3:5053414-5053433 | None:intergenic | 25.0% |
| ! | GAAGATATTGCAAAAATAGA+TGG | - | chr7.3:5052781-5052800 | MS.gene072668:intron | 25.0% |
| ! | TAATGATTTGAATACGTGAA+AGG | + | chr7.3:5055508-5055527 | None:intergenic | 25.0% |
| ! | TATATCAAAGTTCACCTAAT+TGG | - | chr7.3:5051401-5051420 | MS.gene072668:intron | 25.0% |
| ! | TGGTGAAAAGAAAAAATGAA+AGG | + | chr7.3:5052063-5052082 | None:intergenic | 25.0% |
| ! | TTAAAAAAATCATGTGACAC+TGG | + | chr7.3:5051882-5051901 | None:intergenic | 25.0% |
| ! | TTAATACGTAAGAATTCTTG+TGG | + | chr7.3:5054277-5054296 | None:intergenic | 25.0% |
| ! | TTACAGTTAACATTTAGTCT+CGG | - | chr7.3:5052695-5052714 | MS.gene072668:intron | 25.0% |
| ! | TTATATAAACAAACCGGATA+AGG | + | chr7.3:5052189-5052208 | None:intergenic | 25.0% |
| ! | TTGTTTGAAAACAAATCTGA+TGG | - | chr7.3:5053922-5053941 | MS.gene072668:intron | 25.0% |
| ! | TTTAACATTTGTCAACTTGT+TGG | - | chr7.3:5056091-5056110 | MS.gene072668:intron | 25.0% |
| !! | AAGAGACATATTTCTTTTTC+AGG | - | chr7.3:5055964-5055983 | MS.gene072668:intron | 25.0% |
| !! | ACCAACATAATATCCAATTT+TGG | + | chr7.3:5052115-5052134 | None:intergenic | 25.0% |
| !! | AGTGTTAAAATTTTCTGTAC+TGG | - | chr7.3:5052159-5052178 | MS.gene072668:intron | 25.0% |
| !! | CTTTCTAGTATTTCAAATAG+TGG | + | chr7.3:5051559-5051578 | None:intergenic | 25.0% |
| !! | GTCAAACTTAAACTTTTAGT+TGG | + | chr7.3:5054595-5054614 | None:intergenic | 25.0% |
| !! | TATGTCATTTGTATTGAGAA+AGG | - | chr7.3:5056026-5056045 | MS.gene072668:intron | 25.0% |
| !! | TCTTTTGCTCATTTTAAACT+AGG | - | chr7.3:5054472-5054491 | MS.gene072668:intron | 25.0% |
| !! | TTCATGTCATTTACAATTTC+AGG | - | chr7.3:5053129-5053148 | MS.gene072668:intron | 25.0% |
| !! | TTTCAGCTCTTGTTTATATA+CGG | - | chr7.3:5052011-5052030 | MS.gene072668:intron | 25.0% |
| !!! | AGAGACATATTTCTTTTTCA+GGG | - | chr7.3:5055965-5055984 | MS.gene072668:intron | 25.0% |
| !!! | GGGCATAAGTTTTAAAAATA+AGG | + | chr7.3:5055426-5055445 | None:intergenic | 25.0% |
| !!! | TTCATTTTTTCTTTTCACCA+GGG | - | chr7.3:5052063-5052082 | MS.gene072668:intron | 25.0% |
| !!! | TTTCATTTTTTCTTTTCACC+AGG | - | chr7.3:5052062-5052081 | MS.gene072668:intron | 25.0% |
| AAAAGAGTCCATTATTTACC+TGG | + | chr7.3:5053207-5053226 | None:intergenic | 30.0% | |
| AAAATACAGGGTTCAGTTAA+AGG | + | chr7.3:5052304-5052323 | None:intergenic | 30.0% | |
| AAACCTAGACATAATTCTCA+AGG | - | chr7.3:5051293-5051312 | MS.gene072668:CDS | 30.0% | |
| AAAGGTAATGTCTTAAATGG+GGG | + | chr7.3:5055446-5055465 | None:intergenic | 30.0% | |
| AAATGAGCAAAAGAGCAAAA+TGG | + | chr7.3:5054466-5054485 | None:intergenic | 30.0% | |
| AAATGATCGTAAATGTGCAT+TGG | - | chr7.3:5052868-5052887 | MS.gene072668:intron | 30.0% | |
| AAATGGTTATACCTTGATCT+TGG | + | chr7.3:5055753-5055772 | None:intergenic | 30.0% | |
| AACGTGTACTTAATTCCAAA+GGG | + | chr7.3:5054135-5054154 | None:intergenic | 30.0% | |
| AAGCACACATACTACAAATA+TGG | + | chr7.3:5051637-5051656 | None:intergenic | 30.0% | |
| AATTAAGTACACGTTCCATT+TGG | - | chr7.3:5054140-5054159 | MS.gene072668:intron | 30.0% | |
| AGAATGTAAACGAAACAGTA+TGG | + | chr7.3:5053557-5053576 | None:intergenic | 30.0% | |
| AGTTCATGTCATATTTGTAC+CGG | - | chr7.3:5054812-5054831 | MS.gene072668:intron | 30.0% | |
| ATACCTTGAGAATTATGTCT+AGG | + | chr7.3:5051299-5051318 | None:intergenic | 30.0% | |
| ATGATTTGAATACGTGAAAG+GGG | + | chr7.3:5055506-5055525 | None:intergenic | 30.0% | |
| ATTCAAATCATTAGCTGAAG+AGG | - | chr7.3:5055515-5055534 | MS.gene072668:CDS | 30.0% | |
| CAATGTTTCACTAGAATTAG+GGG | + | chr7.3:5052450-5052469 | None:intergenic | 30.0% | |
| CCCAATCAGTTATGTATTAT+AGG | + | chr7.3:5054221-5054240 | None:intergenic | 30.0% | |
| CCCTATAATACATAACTGAT+TGG | - | chr7.3:5054217-5054236 | MS.gene072668:intron | 30.0% | |
| CTTTGGCAACAAATTGAAAA+GGG | - | chr7.3:5052747-5052766 | MS.gene072668:intron | 30.0% | |
| GCAAATAGCTTGGAAAAATA+AGG | + | chr7.3:5052477-5052496 | None:intergenic | 30.0% | |
| GCCAAAATTGGATATTATGT+TGG | - | chr7.3:5052111-5052130 | MS.gene072668:intron | 30.0% | |
| TATAGTAAAAAAATAGGGGG+GGG | + | chr7.3:5054995-5055014 | None:intergenic | 30.0% | |
| TCAAATAGTGGTAGCAATAA+CGG | + | chr7.3:5051547-5051566 | None:intergenic | 30.0% | |
| TCATAGACATTCACAATCTT+TGG | - | chr7.3:5052730-5052749 | MS.gene072668:intron | 30.0% | |
| TCTGAATCACATGACAAATT+TGG | + | chr7.3:5054095-5054114 | None:intergenic | 30.0% | |
| TCTTTGGCAACAAATTGAAA+AGG | - | chr7.3:5052746-5052765 | MS.gene072668:intron | 30.0% | |
| TGCAATAAAAGAAATGCGTA+CGG | + | chr7.3:5053342-5053361 | None:intergenic | 30.0% | |
| TGCATGTTAGTATGATTTGA+TGG | + | chr7.3:5052218-5052237 | None:intergenic | 30.0% | |
| TTAGGGGAATATAGTTACAT+TGG | + | chr7.3:5052434-5052453 | None:intergenic | 30.0% | |
| TTAGTATGATTTGATGGAAG+TGG | + | chr7.3:5052212-5052231 | None:intergenic | 30.0% | |
| TTTAGGTGATGAAAATTTCC+TGG | - | chr7.3:5051697-5051716 | MS.gene072668:intron | 30.0% | |
| TTTGAGGAGAATGAATTTGA+CGG | + | chr7.3:5052835-5052854 | None:intergenic | 30.0% | |
| ! | AATTTTTATGTCCTTGCTAG+TGG | - | chr7.3:5052397-5052416 | MS.gene072668:intron | 30.0% |
| ! | GCTATAAAAAATGATAACGC+AGG | + | chr7.3:5054056-5054075 | None:intergenic | 30.0% |
| ! | TACGATCATTTTGTATAGAG+TGG | + | chr7.3:5052859-5052878 | None:intergenic | 30.0% |
| ! | TGAAAAAGCATAAGCACAAA+TGG | + | chr7.3:5055770-5055789 | None:intergenic | 30.0% |
| ! | TGCTTTTCTTTCCTTTTTTC+CGG | - | chr7.3:5051652-5051671 | MS.gene072668:intron | 30.0% |
| ! | TTATGTCTAGGTTTAGAATG+AGG | + | chr7.3:5051287-5051306 | None:intergenic | 30.0% |
| !! | AAGACATTACCTTTTGTTGT+AGG | - | chr7.3:5055452-5055471 | MS.gene072668:intron | 30.0% |
| !! | TTTTGTATAGAGTGGTTTTG+AGG | + | chr7.3:5052851-5052870 | None:intergenic | 30.0% |
| !!! | TAGTTTTAGAAGTTGAAGGT+GGG | + | chr7.3:5055581-5055600 | None:intergenic | 30.0% |
| !!! | TTAGTTTTAGAAGTTGAAGG+TGG | + | chr7.3:5055582-5055601 | None:intergenic | 30.0% |
| AAACGATATGCTACCCAATT+AGG | + | chr7.3:5051418-5051437 | None:intergenic | 35.0% | |
| AAAGAAACCATACCTCCAAA+TGG | + | chr7.3:5054158-5054177 | None:intergenic | 35.0% | |
| AAAGCACAAAGAATTACGCT+CGG | - | chr7.3:5051726-5051745 | MS.gene072668:CDS | 35.0% | |
| AACTAGGAATGTAAACGAGT+CGG | - | chr7.3:5054488-5054507 | MS.gene072668:intron | 35.0% | |
| ACCAGACACTTTAATTGAGA+AGG | + | chr7.3:5055825-5055844 | None:intergenic | 35.0% | |
| ACGTGTACTTAATTCCAAAG+GGG | + | chr7.3:5054134-5054153 | None:intergenic | 35.0% | |
| ACTATAGTAGCAAAAATGGG+AGG | + | chr7.3:5051333-5051352 | None:intergenic | 35.0% | |
| ACTTAGCTACTTGTATCTCT+TGG | + | chr7.3:5055393-5055412 | None:intergenic | 35.0% | |
| AGACTACAAATGTATGGCAA+TGG | + | chr7.3:5052499-5052518 | None:intergenic | 35.0% | |
| ATAATAACATAGCACGAGTC+AGG | + | chr7.3:5055031-5055050 | None:intergenic | 35.0% | |
| ATAATCGGATCACTTTCTCT+AGG | + | chr7.3:5053064-5053083 | None:intergenic | 35.0% | |
| ATAGTAAAAAAATAGGGGGG+GGG | + | chr7.3:5054994-5055013 | None:intergenic | 35.0% | |
| ATGGTCATACAGGTACAATA+CGG | + | chr7.3:5055179-5055198 | None:intergenic | 35.0% | |
| ATTACCAAGAAGCTTAGAGA+AGG | - | chr7.3:5053779-5053798 | MS.gene072668:CDS | 35.0% | |
| CATAACAATCTCCACATAAG+AGG | + | chr7.3:5052619-5052638 | None:intergenic | 35.0% | |
| CTTATGTGGAGATTGTTATG+AGG | - | chr7.3:5052619-5052638 | MS.gene072668:intron | 35.0% | |
| GAACGTGTACTTAATTCCAA+AGG | + | chr7.3:5054136-5054155 | None:intergenic | 35.0% | |
| GAGCTTAGACTACAAATGTA+TGG | + | chr7.3:5052505-5052524 | None:intergenic | 35.0% | |
| GAGGAAGACATAACGTATAT+CGG | - | chr7.3:5056206-5056225 | MS.gene072668:CDS | 35.0% | |
| GGGGGGAATATACAATATAA+TGG | + | chr7.3:5054977-5054996 | None:intergenic | 35.0% | |
| GTTCATGTCATATTTGTACC+GGG | - | chr7.3:5054813-5054832 | MS.gene072668:intron | 35.0% | |
| TAATAACATAGCACGAGTCA+GGG | + | chr7.3:5055030-5055049 | None:intergenic | 35.0% | |
| TACTTGTATCTCTTGGAACA+CGG | + | chr7.3:5055386-5055405 | None:intergenic | 35.0% | |
| TAGCTGATCATTATAGTGCA+AGG | - | chr7.3:5051753-5051772 | MS.gene072668:CDS | 35.0% | |
| TATGAAACGAAGCGAATTTG+TGG | - | chr7.3:5055690-5055709 | MS.gene072668:CDS | 35.0% | |
| TCCTTATCGAAGCTGATAAT+CGG | + | chr7.3:5053079-5053098 | None:intergenic | 35.0% | |
| TCGAGCTCAATCTCAAATTT+AGG | - | chr7.3:5055331-5055350 | MS.gene072668:CDS | 35.0% | |
| TGATCTTATCAAATGGGACA+AGG | - | chr7.3:5052089-5052108 | MS.gene072668:intron | 35.0% | |
| TGGCAACTACAGATATCAAA+AGG | + | chr7.3:5053187-5053206 | None:intergenic | 35.0% | |
| TGTAGTTGCCAGGTAAATAA+TGG | - | chr7.3:5053196-5053215 | MS.gene072668:intron | 35.0% | |
| ! | AACTCACCATACTGTTTTGT+CGG | - | chr7.3:5053510-5053529 | MS.gene072668:intron | 35.0% |
| ! | AAGCTTCTTGGTAATCACAT+TGG | + | chr7.3:5053774-5053793 | None:intergenic | 35.0% |
| ! | CATGTTCAATTTTCCTCGAT+GGG | + | chr7.3:5054338-5054357 | None:intergenic | 35.0% |
| ! | CTTTGGTAATAGTGTCTACT+CGG | - | chr7.3:5053979-5053998 | MS.gene072668:intron | 35.0% |
| ! | GCTTTTCTTTCCTTTTTTCC+GGG | - | chr7.3:5051653-5051672 | MS.gene072668:intron | 35.0% |
| ! | TCATGTTCAATTTTCCTCGA+TGG | + | chr7.3:5054339-5054358 | None:intergenic | 35.0% |
| ! | TCCTTCTCAATTAAAGTGTC+TGG | - | chr7.3:5055821-5055840 | MS.gene072668:intron | 35.0% |
| ! | TTTTGATATCTGTAGTTGCC+AGG | - | chr7.3:5053186-5053205 | MS.gene072668:intron | 35.0% |
| !! | AGATTTTGACACATACTGTG+TGG | - | chr7.3:5052903-5052922 | MS.gene072668:intron | 35.0% |
| !! | TGTCAACTTGTTGGTTGAAA+TGG | - | chr7.3:5056100-5056119 | MS.gene072668:intron | 35.0% |
| !! | TTTACAATTTCAGGTTCGCT+TGG | - | chr7.3:5053138-5053157 | MS.gene072668:intron | 35.0% |
| !!! | ATTTTTTCTTTTCACCAGGG+TGG | - | chr7.3:5052066-5052085 | MS.gene072668:intron | 35.0% |
| !!! | TTCTTTTTCAGGGACACTAT+CGG | - | chr7.3:5055975-5055994 | MS.gene072668:intron | 35.0% |
| AAATGGGACAAGGCCAAAAT+TGG | - | chr7.3:5052099-5052118 | MS.gene072668:intron | 40.0% | |
| AACACCTTCTCTAAGCTTCT+TGG | + | chr7.3:5053786-5053805 | None:intergenic | 40.0% | |
| AATGCAAACTCAAACCCACT+TGG | + | chr7.3:5054414-5054433 | None:intergenic | 40.0% | |
| ACTAAATGAGGTCAGCTACA+TGG | + | chr7.3:5053886-5053905 | None:intergenic | 40.0% | |
| ACTAGGAATGTAAACGAGTC+GGG | - | chr7.3:5054489-5054508 | MS.gene072668:intron | 40.0% | |
| AGGGTGGTGATCTTATCAAA+TGG | - | chr7.3:5052082-5052101 | MS.gene072668:intron | 40.0% | |
| AGGTGATGAAAATTTCCTGG+AGG | - | chr7.3:5051700-5051719 | MS.gene072668:intron | 40.0% | |
| AGTTTGCATTGCATTACTCC+TGG | - | chr7.3:5053660-5053679 | MS.gene072668:intron | 40.0% | |
| ATGAGCTTGAAGGAGATTCT+CGG | + | chr7.3:5051256-5051275 | None:intergenic | 40.0% | |
| ATGCAAACTCAAACCCACTT+GGG | + | chr7.3:5054413-5054432 | None:intergenic | 40.0% | |
| ATTTGATAAGATCACCACCC+TGG | + | chr7.3:5052083-5052102 | None:intergenic | 40.0% | |
| CAAATTTACTGCCACTAGCA+AGG | + | chr7.3:5052411-5052430 | None:intergenic | 40.0% | |
| CAACTCAAGCTTCAAGTACA+TGG | + | chr7.3:5054520-5054539 | None:intergenic | 40.0% | |
| CGAGTAGACACTATTACCAA+AGG | + | chr7.3:5053981-5054000 | None:intergenic | 40.0% | |
| GAATCAAGTTCAAGCGTTAC+AGG | + | chr7.3:5055301-5055320 | None:intergenic | 40.0% | |
| GAATCTCCTTCAAGCTCATT+CGG | - | chr7.3:5051257-5051276 | MS.gene072668:CDS | 40.0% | |
| GATGTGAATATGCAGCTGAA+GGG | - | chr7.3:5053951-5053970 | MS.gene072668:intron | 40.0% | |
| GCAACTCATTCGCAATTTCT+TGG | - | chr7.3:5052033-5052052 | MS.gene072668:intron | 40.0% | |
| GGGTGGTGATCTTATCAAAT+GGG | - | chr7.3:5052083-5052102 | MS.gene072668:intron | 40.0% | |
| GTAATAGTGTCTACTCGGTT+TGG | - | chr7.3:5053984-5054003 | MS.gene072668:intron | 40.0% | |
| TAACGGTTACAATCGTGTCA+CGG | + | chr7.3:5051530-5051549 | None:intergenic | 40.0% | |
| TAAGCTTTCACCCGGAAAAA+AGG | + | chr7.3:5051666-5051685 | None:intergenic | 40.0% | |
| TAAGTACACGTTCCATTTGG+AGG | - | chr7.3:5054143-5054162 | MS.gene072668:intron | 40.0% | |
| TACTTCCATACCTCTTGACA+TGG | - | chr7.3:5052995-5053014 | MS.gene072668:intron | 40.0% | |
| TAGAAGTTGAAGGTGGGATT+AGG | + | chr7.3:5055575-5055594 | None:intergenic | 40.0% | |
| TAGGGAATCGTTGTAGAACA+GGG | + | chr7.3:5053396-5053415 | None:intergenic | 40.0% | |
| TATGGCAATGGCAAATAGCT+TGG | + | chr7.3:5052487-5052506 | None:intergenic | 40.0% | |
| TCCGATTATCAGCTTCGATA+AGG | - | chr7.3:5053075-5053094 | MS.gene072668:intron | 40.0% | |
| TGAATACTCCATCTGAGTAC+AGG | - | chr7.3:5054911-5054930 | MS.gene072668:CDS | 40.0% | |
| TGATGTGAATATGCAGCTGA+AGG | - | chr7.3:5053950-5053969 | MS.gene072668:intron | 40.0% | |
| TGGTCATACAGGTACAATAC+GGG | + | chr7.3:5055178-5055197 | None:intergenic | 40.0% | |
| TTAGGGAATCGTTGTAGAAC+AGG | + | chr7.3:5053397-5053416 | None:intergenic | 40.0% | |
| TTTAAATCATCCTGCCCCTT+TGG | - | chr7.3:5054117-5054136 | MS.gene072668:intron | 40.0% | |
| TTTCTTGTAAACCAACAGCG+AGG | - | chr7.3:5056125-5056144 | MS.gene072668:intron | 40.0% | |
| ! | AATGATAACGCAGGATGATC+AGG | + | chr7.3:5054047-5054066 | None:intergenic | 40.0% |
| ! | GTTGTACCGACAAAACAGTA+TGG | + | chr7.3:5053519-5053538 | None:intergenic | 40.0% |
| ! | TTGGTAATCACATTGGCATC+TGG | + | chr7.3:5053767-5053786 | None:intergenic | 40.0% |
| ! | TTTGAAGTTGCCATGTCAAG+AGG | + | chr7.3:5053008-5053027 | None:intergenic | 40.0% |
| ! | TTTTCCTCGATGGGCAAATT+TGG | + | chr7.3:5054329-5054348 | None:intergenic | 40.0% |
| !! | AAAGTTGATGCAGAGCAACA+AGG | + | chr7.3:5053294-5053313 | None:intergenic | 40.0% |
| !! | AAGAGTATCAGGTACAGGTA+TGG | + | chr7.3:5054841-5054860 | None:intergenic | 40.0% |
| !! | ACTTCTTAAGCTCTGAAGCA+TGG | - | chr7.3:5054780-5054799 | MS.gene072668:intron | 40.0% |
| !! | ACTTGTACCAGAAGAGTATC+AGG | + | chr7.3:5054852-5054871 | None:intergenic | 40.0% |
| !! | CAATACGGGATTTCTAGCTA+AGG | + | chr7.3:5055164-5055183 | None:intergenic | 40.0% |
| !! | CTTCTTAAGCTCTGAAGCAT+GGG | - | chr7.3:5054781-5054800 | MS.gene072668:intron | 40.0% |
| !! | GTTGGTATTGACATTGCTGA+AGG | - | chr7.3:5052129-5052148 | MS.gene072668:intron | 40.0% |
| !! | TCGAGGGTTGATGCATATTA+CGG | - | chr7.3:5056184-5056203 | MS.gene072668:CDS | 40.0% |
| !!! | AGCTTACGCTGGTTTTGTTT+AGG | - | chr7.3:5051680-5051699 | MS.gene072668:intron | 40.0% |
| !!! | CTGTACTGGTTTTCCTTATC+CGG | - | chr7.3:5052173-5052192 | MS.gene072668:intron | 40.0% |
| !!! | TCATGGTAGCTTTGAGGTTT+TGG | + | chr7.3:5051457-5051476 | None:intergenic | 40.0% |
| AAACTCAAACCCACTTGGGT+TGG | + | chr7.3:5054409-5054428 | None:intergenic | 45.0% | |
| AACTCAAACCCACTTGGGTT+GGG | + | chr7.3:5054408-5054427 | None:intergenic | 45.0% | |
| ACACGTTCCATTTGGAGGTA+TGG | - | chr7.3:5054148-5054167 | MS.gene072668:intron | 45.0% | |
| ACCTGTACCTGATACTCTTC+TGG | - | chr7.3:5054842-5054861 | MS.gene072668:CDS | 45.0% | |
| ACTTCTTACGTCGCTGATGA+TGG | + | chr7.3:5052580-5052599 | None:intergenic | 45.0% | |
| AGTTGCCATGTCAAGAGGTA+TGG | + | chr7.3:5053003-5053022 | None:intergenic | 45.0% | |
| ATACTCCATCTGAGTACAGG+TGG | - | chr7.3:5054914-5054933 | MS.gene072668:CDS | 45.0% | |
| ATTAACACCTACCTTGCCAC+AGG | + | chr7.3:5051988-5052007 | None:intergenic | 45.0% | |
| ATTCAACTCTATGCTTGCCG+AGG | - | chr7.3:5051942-5051961 | MS.gene072668:intron | 45.0% | |
| CAACAGCGTCCTACAACAAA+AGG | + | chr7.3:5055464-5055483 | None:intergenic | 45.0% | |
| CCTGTATGACCATATCCATG+CGG | - | chr7.3:5055186-5055205 | MS.gene072668:intron | 45.0% | |
| CGCTTCGTTTCATATACTCG+TGG | + | chr7.3:5055684-5055703 | None:intergenic | 45.0% | |
| GTACTTAATTCCAAAGGGGC+AGG | + | chr7.3:5054130-5054149 | None:intergenic | 45.0% | |
| GTATATCGTCAGTGTCGTCT+CGG | + | chr7.3:5055856-5055875 | None:intergenic | 45.0% | |
| TACTCCATCTGAGTACAGGT+GGG | - | chr7.3:5054915-5054934 | MS.gene072668:CDS | 45.0% | |
| TCTTTGTGCTTTCATCCTCC+AGG | + | chr7.3:5051718-5051737 | None:intergenic | 45.0% | |
| TGAAAGGGGACAATCCATTC+AGG | + | chr7.3:5055492-5055511 | None:intergenic | 45.0% | |
| TGACACTAACACGTTGACAC+CGG | + | chr7.3:5055907-5055926 | None:intergenic | 45.0% | |
| TGAGTGGCAGAAAAGATCGA+GGG | - | chr7.3:5056168-5056187 | MS.gene072668:CDS | 45.0% | |
| TGTGGCAAGGTAGGTGTTAA+TGG | - | chr7.3:5051987-5052006 | MS.gene072668:CDS | 45.0% | |
| ! | ACGCTGTTGATTGTCCTGAA+TGG | - | chr7.3:5055475-5055494 | MS.gene072668:intron | 45.0% |
| ! | ACTAGCTTCTCGTTCTTCCA+GGG | + | chr7.3:5051789-5051808 | None:intergenic | 45.0% |
| ! | GACACTATCGGCTGATGAAT+GGG | - | chr7.3:5055987-5056006 | MS.gene072668:intron | 45.0% |
| ! | GATCTTTTCTGCCACTCACT+CGG | + | chr7.3:5056166-5056185 | None:intergenic | 45.0% |
| !! | ACCAGAAGAGTATCAGGTAC+AGG | + | chr7.3:5054846-5054865 | None:intergenic | 45.0% |
| !! | AGGGTTGATGCATATTACGG+AGG | - | chr7.3:5056187-5056206 | MS.gene072668:CDS | 45.0% |
| !! | CATCACCATTGTAACGGGTA+CGG | + | chr7.3:5052553-5052572 | None:intergenic | 45.0% |
| !! | ATATATAGAATAAAAAAATT+TGG | + | chr7.3:5055065-5055084 | None:intergenic | 5.0% |
| !! | ATTTATATAGTAAAAAAATA+GGG | + | chr7.3:5055000-5055019 | None:intergenic | 5.0% |
| AACCAGCGTAAGCTTTCACC+CGG | + | chr7.3:5051674-5051693 | None:intergenic | 50.0% | |
| AGATCTACGCCGCATGGATA+TGG | + | chr7.3:5055198-5055217 | None:intergenic | 50.0% | |
| AGTACCCACCTGTACTCAGA+TGG | + | chr7.3:5054922-5054941 | None:intergenic | 50.0% | |
| CCGCATGGATATGGTCATAC+AGG | + | chr7.3:5055189-5055208 | None:intergenic | 50.0% | |
| CCTCAAAGCTACCATGACTG+AGG | - | chr7.3:5051460-5051479 | MS.gene072668:CDS | 50.0% | |
| CCTGACAAAAACCGAGTGAG+TGG | - | chr7.3:5056152-5056171 | MS.gene072668:intron | 50.0% | |
| CTTGGAGTGTGCTCTTCTCA+AGG | + | chr7.3:5054364-5054383 | None:intergenic | 50.0% | |
| GATTGCCGTACCCGTTACAA+TGG | - | chr7.3:5052545-5052564 | MS.gene072668:intron | 50.0% | |
| GCATTACTCCTGGTCTACAG+AGG | - | chr7.3:5053670-5053689 | MS.gene072668:intron | 50.0% | |
| GGTCGGCATCACCATTGTAA+CGG | + | chr7.3:5052559-5052578 | None:intergenic | 50.0% | |
| GGTTGACCGAATGAGCTTGA+AGG | + | chr7.3:5051266-5051285 | None:intergenic | 50.0% | |
| GTAGCCAAATTTGCCCATCG+AGG | - | chr7.3:5054322-5054341 | MS.gene072668:intron | 50.0% | |
| GTCGGCATCACCATTGTAAC+GGG | + | chr7.3:5052558-5052577 | None:intergenic | 50.0% | |
| GTGAGTGGCAGAAAAGATCG+AGG | - | chr7.3:5056167-5056186 | MS.gene072668:CDS | 50.0% | |
| GTGTCAGCTTTACTTCGTCC+AGG | - | chr7.3:5053719-5053738 | MS.gene072668:CDS | 50.0% | |
| TACCATGACTGAGGCTGCAA+CGG | - | chr7.3:5051469-5051488 | MS.gene072668:CDS | 50.0% | |
| TCAGCTTTACTTCGTCCAGG+AGG | - | chr7.3:5053722-5053741 | MS.gene072668:CDS | 50.0% | |
| TCAGGTACAGGTATGGTACC+CGG | + | chr7.3:5054834-5054853 | None:intergenic | 50.0% | |
| TCCATGCGGCGTAGATCTTA+AGG | - | chr7.3:5055200-5055219 | MS.gene072668:intron | 50.0% | |
| TCGCTTGGACAAAGTTCTCG+CGG | - | chr7.3:5053153-5053172 | MS.gene072668:intron | 50.0% | |
| TCGTGTCACGGTCATCGAAA+TGG | + | chr7.3:5051518-5051537 | None:intergenic | 50.0% | |
| TGTATCTCTTGGAACACGGC+TGG | + | chr7.3:5055382-5055401 | None:intergenic | 50.0% | |
| TTTCCTGCTCGCCTCTTATG+TGG | - | chr7.3:5052605-5052624 | MS.gene072668:intron | 50.0% | |
| ! | CCACTCACTCGGTTTTTGTC+AGG | + | chr7.3:5056155-5056174 | None:intergenic | 50.0% |
| ! | CCTCAGTCATGGTAGCTTTG+AGG | + | chr7.3:5051463-5051482 | None:intergenic | 50.0% |
| ! | CTTGAGAAGAGCACACTCCA+AGG | - | chr7.3:5054362-5054381 | MS.gene072668:intron | 50.0% |
| ! | GGACACTATCGGCTGATGAA+TGG | - | chr7.3:5055986-5056005 | MS.gene072668:intron | 50.0% |
| ! | GGTCAAGTACTGCATCTCCT+CGG | + | chr7.3:5051962-5051981 | None:intergenic | 50.0% |
| !! | ATGCGAAGACTTGGTGCGTT+GGG | - | chr7.3:5055718-5055737 | MS.gene072668:CDS | 50.0% |
| !! | CTTACGTCGCTGATGATGGT+CGG | + | chr7.3:5052576-5052595 | None:intergenic | 50.0% |
| !! | GACTAGCTTCTCGTTCTTCC+AGG | + | chr7.3:5051790-5051809 | None:intergenic | 50.0% |
| !!! | TGGGCTAGTGGTTTTGGCTT+GGG | + | chr7.3:5054389-5054408 | None:intergenic | 50.0% |
| !!! | TTGGGCTAGTGGTTTTGGCT+TGG | + | chr7.3:5054390-5054409 | None:intergenic | 50.0% |
| !!! | TTGGGTTGGGCTAGTGGTTT+TGG | + | chr7.3:5054395-5054414 | None:intergenic | 50.0% |
| AACCACTAGCCCAACCCAAG+TGG | - | chr7.3:5054396-5054415 | MS.gene072668:intron | 55.0% | |
| ACCACTAGCCCAACCCAAGT+GGG | - | chr7.3:5054397-5054416 | MS.gene072668:intron | 55.0% | |
| ACGCACCAAGTCTTCGCATG+AGG | + | chr7.3:5055717-5055736 | None:intergenic | 55.0% | |
| ACTTGACCTTGCCTGTGGCA+AGG | - | chr7.3:5051974-5051993 | MS.gene072668:CDS | 55.0% | |
| CTTCTCGTTCTTCCAGGGTC+TGG | + | chr7.3:5051784-5051803 | None:intergenic | 55.0% | |
| GCAGCTGAAGGGTTGACCTT+TGG | - | chr7.3:5053962-5053981 | MS.gene072668:intron | 55.0% | |
| GCAGTACTTGACCTTGCCTG+TGG | - | chr7.3:5051969-5051988 | MS.gene072668:CDS | 55.0% | |
| GCCTTAAGATCTACGCCGCA+TGG | + | chr7.3:5055204-5055223 | None:intergenic | 55.0% | |
| GGGGATGGCAACCAAGATCA+AGG | - | chr7.3:5055739-5055758 | MS.gene072668:CDS | 55.0% | |
| GTGGACCTCATGCGAAGACT+TGG | - | chr7.3:5055709-5055728 | MS.gene072668:CDS | 55.0% | |
| GTTCCGATGAAAACGCCTCC+TGG | + | chr7.3:5053740-5053759 | None:intergenic | 55.0% | |
| TCGTTCTTCCAGGGTCTGGT+TGG | + | chr7.3:5051780-5051799 | None:intergenic | 55.0% | |
| TCTCCACATAAGAGGCGAGC+AGG | + | chr7.3:5052611-5052630 | None:intergenic | 55.0% | |
| TTCCGGGTGAAAGCTTACGC+TGG | - | chr7.3:5051669-5051688 | MS.gene072668:intron | 55.0% | |
| !! | CATGCGAAGACTTGGTGCGT+TGG | - | chr7.3:5055717-5055736 | MS.gene072668:CDS | 55.0% |
| !! | TGCGAAGACTTGGTGCGTTG+GGG | - | chr7.3:5055719-5055738 | MS.gene072668:CDS | 55.0% |
| !! | TGTCAGGTTGACCTCGCTGT+TGG | + | chr7.3:5056139-5056158 | None:intergenic | 55.0% |
| !!! | CGTCCAGGAGGCGTTTTCAT+CGG | - | chr7.3:5053734-5053753 | MS.gene072668:CDS | 55.0% |
| !!! | GTGGTTTTGGCTTGGGACCT+TGG | + | chr7.3:5054382-5054401 | None:intergenic | 55.0% |
| AGCACGTGCCTCTGTAGACC+AGG | + | chr7.3:5053681-5053700 | None:intergenic | 60.0% | |
| CACCGTTGCAGCCTCAGTCA+TGG | + | chr7.3:5051474-5051493 | None:intergenic | 60.0% | |
| CACCTACCTTGCCACAGGCA+AGG | + | chr7.3:5051983-5052002 | None:intergenic | 60.0% | |
| CATGACTGAGGCTGCAACGG+TGG | - | chr7.3:5051472-5051491 | MS.gene072668:CDS | 60.0% | |
| GACCTTGCCTGTGGCAAGGT+AGG | - | chr7.3:5051978-5051997 | MS.gene072668:CDS | 60.0% | |
| TGCAAGGTCCAACCAGACCC+TGG | - | chr7.3:5051769-5051788 | MS.gene072668:CDS | 60.0% | |
| ! | GGTCTACAGAGGCACGTGCT+CGG | - | chr7.3:5053681-5053700 | MS.gene072668:CDS | 60.0% |
| !! | ACCCACTTGGGTTGGGCTAG+TGG | + | chr7.3:5054401-5054420 | None:intergenic | 60.0% |
| !! | AGACTTGGTGCGTTGGGGGA+TGG | - | chr7.3:5055724-5055743 | MS.gene072668:CDS | 60.0% |
| !! | GCGAAGACTTGGTGCGTTGG+GGG | - | chr7.3:5055720-5055739 | MS.gene072668:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5051239 | 5056241 | 5051239 | ID=MS.gene072668 |
| chr7.3 | mRNA | 5051239 | 5056241 | 5051239 | ID=MS.gene072668.t1;Parent=MS.gene072668 |
| chr7.3 | exon | 5056166 | 5056241 | 5056166 | ID=MS.gene072668.t1.exon1;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5056166 | 5056241 | 5056166 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5055639 | 5055778 | 5055639 | ID=MS.gene072668.t1.exon2;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5055639 | 5055778 | 5055639 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5055485 | 5055553 | 5055485 | ID=MS.gene072668.t1.exon3;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5055485 | 5055553 | 5055485 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5055325 | 5055396 | 5055325 | ID=MS.gene072668.t1.exon4;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5055325 | 5055396 | 5055325 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5054840 | 5054941 | 5054840 | ID=MS.gene072668.t1.exon5;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5054840 | 5054941 | 5054840 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5054273 | 5054329 | 5054273 | ID=MS.gene072668.t1.exon6;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5054273 | 5054329 | 5054273 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5053680 | 5053818 | 5053680 | ID=MS.gene072668.t1.exon7;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5053680 | 5053818 | 5053680 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5053450 | 5053514 | 5053450 | ID=MS.gene072668.t1.exon8;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5053450 | 5053514 | 5053450 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5053316 | 5053366 | 5053316 | ID=MS.gene072668.t1.exon9;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5053316 | 5053366 | 5053316 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5051944 | 5052006 | 5051944 | ID=MS.gene072668.t1.exon10;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5051944 | 5052006 | 5051944 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5051720 | 5051843 | 5051720 | ID=MS.gene072668.t1.exon11;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5051720 | 5051843 | 5051720 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5051433 | 5051494 | 5051433 | ID=MS.gene072668.t1.exon12;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5051433 | 5051494 | 5051433 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| chr7.3 | exon | 5051239 | 5051337 | 5051239 | ID=MS.gene072668.t1.exon13;Parent=MS.gene072668.t1 |
| chr7.3 | CDS | 5051239 | 5051337 | 5051239 | ID=cds.MS.gene072668.t1;Parent=MS.gene072668.t1 |
| Gene Sequence |
| Protein sequence |
