Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07314.t1 | RHN81020.1 | 97.3 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 4.40E-268 | 933.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07314.t1 | Q9FZ24 | 47.2 | 451 | 228 | 5 | 29 | 469 | 69 | 519 | 4.1e-113 | 409.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07314.t1 | G7ICW4 | 97.3 | 480 | 13 | 0 | 1 | 480 | 1 | 480 | 3.2e-268 | 933.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene07314 | 0.828054 | 1.11E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene07314 | 0.823944 | 1.05E-53 | -1.69E-46 |
| MS.gene051597 | MS.gene07314 | 0.805899 | 1.07E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene07314 | 0.803856 | 2.86E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene07314 | 0.816189 | 6.29E-52 | -1.69E-46 |
| MS.gene052717 | MS.gene07314 | 0.815025 | 1.14E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene07314 | 0.80618 | 9.32E-50 | -1.69E-46 |
| MS.gene05308 | MS.gene07314 | 0.810043 | 1.40E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene07314 | 0.817929 | 2.56E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene07314 | 0.82337 | 1.44E-53 | -1.69E-46 |
| MS.gene055166 | MS.gene07314 | 0.810756 | 9.84E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene07314 | 0.81837 | 2.03E-52 | -1.69E-46 |
| MS.gene055808 | MS.gene07314 | 0.824442 | 8.05E-54 | -1.69E-46 |
| MS.gene056091 | MS.gene07314 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene056403 | MS.gene07314 | 0.840703 | 7.41E-58 | -1.69E-46 |
| MS.gene05659 | MS.gene07314 | 0.80575 | 1.15E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene07314 | 0.859348 | 4.40E-63 | -1.69E-46 |
| MS.gene05689 | MS.gene07314 | 0.872631 | 2.74E-67 | -1.69E-46 |
| MS.gene05953 | MS.gene07314 | 0.803389 | 3.57E-49 | -1.69E-46 |
| MS.gene059901 | MS.gene07314 | -0.814721 | 1.33E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene07314 | 0.865583 | 5.32E-65 | -1.69E-46 |
| MS.gene060830 | MS.gene07314 | 0.843947 | 1.02E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07314 | MS.gene008871 | PPI |
| MS.gene07314 | MS.gene69362 | PPI |
| MS.gene07314 | MS.gene067932 | PPI |
| MS.gene07314 | MS.gene068115 | PPI |
| MS.gene07314 | MS.gene008872 | PPI |
| MS.gene07314 | MS.gene008863 | PPI |
| MS.gene07314 | MS.gene056432 | PPI |
| MS.gene014383 | MS.gene07314 | PPI |
| MS.gene07314 | MS.gene067938 | PPI |
| MS.gene068116 | MS.gene07314 | PPI |
| MS.gene07314 | MS.gene068108 | PPI |
| MS.gene07314 | MS.gene52807 | PPI |
| MS.gene07314 | MS.gene064795 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07314.t1 | MTR_1g086820 | 97.292 | 480 | 13 | 0 | 1 | 480 | 1 | 480 | 0.0 | 972 |
| MS.gene07314.t1 | MTR_8g069570 | 38.377 | 456 | 265 | 7 | 40 | 480 | 29 | 483 | 2.12e-93 | 292 |
| MS.gene07314.t1 | MTR_2g013450 | 30.176 | 454 | 303 | 8 | 29 | 471 | 26 | 476 | 2.27e-62 | 211 |
| MS.gene07314.t1 | MTR_8g007375 | 32.884 | 371 | 246 | 3 | 93 | 460 | 7 | 377 | 1.80e-58 | 198 |
| MS.gene07314.t1 | MTR_1g072300 | 30.839 | 441 | 289 | 9 | 20 | 450 | 25 | 459 | 2.66e-56 | 195 |
| MS.gene07314.t1 | MTR_2g047855 | 30.189 | 424 | 280 | 8 | 13 | 430 | 19 | 432 | 4.09e-56 | 194 |
| MS.gene07314.t1 | MTR_8g465890 | 30.425 | 424 | 281 | 6 | 14 | 431 | 16 | 431 | 3.09e-55 | 192 |
| MS.gene07314.t1 | MTR_3g099753 | 29.252 | 441 | 295 | 8 | 20 | 450 | 26 | 459 | 9.16e-51 | 180 |
| MS.gene07314.t1 | MTR_3g099753 | 29.252 | 441 | 295 | 8 | 20 | 450 | 50 | 483 | 1.65e-50 | 180 |
| MS.gene07314.t1 | MTR_8g059115 | 28.696 | 345 | 244 | 2 | 100 | 442 | 13 | 357 | 4.26e-47 | 168 |
| MS.gene07314.t1 | MTR_2g090290 | 27.381 | 420 | 255 | 9 | 51 | 441 | 52 | 450 | 7.19e-42 | 155 |
| MS.gene07314.t1 | MTR_1g022400 | 30.241 | 291 | 199 | 4 | 46 | 332 | 69 | 359 | 2.10e-41 | 152 |
| MS.gene07314.t1 | MTR_8g031520 | 37.129 | 202 | 123 | 3 | 27 | 224 | 99 | 300 | 2.72e-31 | 122 |
| MS.gene07314.t1 | MTR_7g089770 | 23.810 | 399 | 286 | 12 | 38 | 430 | 163 | 549 | 2.19e-24 | 107 |
| MS.gene07314.t1 | MTR_1g050750 | 22.931 | 423 | 306 | 12 | 29 | 445 | 90 | 498 | 2.76e-22 | 100 |
| MS.gene07314.t1 | MTR_2g096880 | 23.197 | 319 | 241 | 4 | 17 | 333 | 30 | 346 | 8.27e-18 | 86.3 |
| MS.gene07314.t1 | MTR_8g098755 | 22.884 | 319 | 234 | 7 | 82 | 392 | 334 | 648 | 2.25e-12 | 69.7 |
| MS.gene07314.t1 | MTR_7g017530 | 29.213 | 178 | 122 | 3 | 130 | 304 | 283 | 459 | 1.57e-11 | 67.4 |
| MS.gene07314.t1 | MTR_8g080940 | 22.812 | 320 | 223 | 8 | 53 | 359 | 520 | 828 | 6.04e-11 | 65.5 |
| MS.gene07314.t1 | MTR_8g080940 | 22.812 | 320 | 223 | 8 | 53 | 359 | 722 | 1030 | 9.70e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07314.t1 | AT1G02370 | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.17e-145 | 427 |
| MS.gene07314.t1 | AT4G01990 | 43.542 | 480 | 249 | 8 | 11 | 469 | 6 | 484 | 2.41e-128 | 382 |
| MS.gene07314.t1 | AT1G60770 | 37.069 | 464 | 271 | 10 | 33 | 480 | 25 | 483 | 1.10e-89 | 282 |
| MS.gene07314.t1 | AT1G02150 | 34.259 | 432 | 279 | 4 | 33 | 459 | 69 | 500 | 1.29e-76 | 249 |
| MS.gene07314.t1 | AT4G21705 | 31.818 | 418 | 281 | 4 | 29 | 442 | 23 | 440 | 1.42e-68 | 227 |
| MS.gene07314.t1 | AT2G20710 | 29.540 | 413 | 284 | 5 | 32 | 441 | 39 | 447 | 1.12e-57 | 198 |
| MS.gene07314.t1 | AT4G02820 | 29.895 | 475 | 305 | 9 | 8 | 470 | 41 | 499 | 4.23e-55 | 192 |
| MS.gene07314.t1 | AT5G27460 | 29.070 | 430 | 290 | 6 | 12 | 431 | 21 | 445 | 5.67e-53 | 186 |
| MS.gene07314.t1 | AT5G09450 | 31.056 | 322 | 216 | 5 | 25 | 340 | 49 | 370 | 2.60e-48 | 171 |
| MS.gene07314.t1 | AT2G20710 | 29.942 | 344 | 235 | 4 | 100 | 441 | 13 | 352 | 5.56e-47 | 167 |
| MS.gene07314.t1 | AT1G28020 | 28.267 | 329 | 231 | 5 | 36 | 359 | 41 | 369 | 3.93e-32 | 129 |
| MS.gene07314.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07314.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07314.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07314.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07314.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07314.t1 | AT1G15480 | 25.205 | 365 | 261 | 9 | 43 | 402 | 138 | 495 | 3.93e-23 | 103 |
| MS.gene07314.t1 | AT3G15590 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.30e-22 | 101 |
| MS.gene07314.t1 | AT3G15590 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.30e-22 | 101 |
| MS.gene07314.t1 | AT1G07590 | 24.633 | 341 | 251 | 5 | 27 | 365 | 64 | 400 | 2.39e-19 | 91.3 |
| MS.gene07314.t1 | AT3G11380 | 26.780 | 295 | 180 | 6 | 66 | 355 | 78 | 341 | 8.38e-18 | 86.7 |
| MS.gene07314.t1 | AT3G11380 | 34.722 | 144 | 90 | 4 | 57 | 196 | 372 | 515 | 4.56e-12 | 68.6 |
| MS.gene07314.t1 | AT1G28000 | 24.567 | 289 | 210 | 6 | 13 | 293 | 13 | 301 | 1.29e-15 | 79.0 |
| MS.gene07314.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene07314.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene07314.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene07314.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene07314.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene07314.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene07314.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene07314.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene07314.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
Find 115 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGGTTTGCCTTCTTATT+TGG | 0.179522 | 1.4:+69207895 | None:intergenic |
| GGGCATAATAAAATTGTTTA+AGG | 0.218164 | 1.4:-69206163 | MS.gene07314:CDS |
| AATTACGGCCGTTTGATTTC+CGG | 0.228375 | 1.4:-69207970 | MS.gene07314:CDS |
| TTTGATAAGATGGATGAATT+AGG | 0.262779 | 1.4:-69206669 | MS.gene07314:CDS |
| ATGAGTTAAGCAAGATTCTT+AGG | 0.291614 | 1.4:-69205828 | MS.gene07314:CDS |
| GGCATGTTAGTTATGATTCT+AGG | 0.296691 | 1.4:-69206128 | MS.gene07314:CDS |
| CCATATCATTAAGCCTTCTA+AGG | 0.308417 | 1.4:+69206187 | None:intergenic |
| TTATGCTTTCTAACCTTAGA+AGG | 0.314226 | 1.4:-69206200 | MS.gene07314:CDS |
| CTTTCCCTTCGATTATATAC+TGG | 0.317101 | 1.4:+69207818 | None:intergenic |
| GCTGCAGAGGACCTTTCTTT+AGG | 0.319713 | 1.4:-69206023 | MS.gene07314:CDS |
| AGGACCTTTCTTTAGGATTC+GGG | 0.341722 | 1.4:-69206016 | MS.gene07314:CDS |
| GAGGACCTTTCTTTAGGATT+CGG | 0.351526 | 1.4:-69206017 | MS.gene07314:CDS |
| TAGGATTCGGGAAATGTTCA+TGG | 0.370256 | 1.4:-69206004 | MS.gene07314:CDS |
| CCTTAGAAGGCTTAATGATA+TGG | 0.371817 | 1.4:-69206187 | MS.gene07314:CDS |
| TTCTTGCTGAGCCTTTATGC+TGG | 0.387794 | 1.4:-69206303 | MS.gene07314:CDS |
| CATATACATAGACATCAAAT+TGG | 0.389303 | 1.4:+69206623 | None:intergenic |
| TTTATTGGAGAAAGGTCAAT+TGG | 0.391224 | 1.4:-69205977 | MS.gene07314:CDS |
| GGAAGCTGTGTCGGTCTTTG+AGG | 0.399258 | 1.4:-69206058 | MS.gene07314:CDS |
| GTTGGTTGGTGTTGCAGTGC+AGG | 0.407651 | 1.4:-69206106 | MS.gene07314:CDS |
| GTTACAAATTCTCGTGGGCT+TGG | 0.417988 | 1.4:+69205707 | None:intergenic |
| GAAGAAGAAACAGATCTTGA+TGG | 0.427741 | 1.4:-69205856 | MS.gene07314:CDS |
| AATAAAATTGTTTAAGGAGT+GGG | 0.433563 | 1.4:-69206157 | MS.gene07314:CDS |
| TGTTTAAGGAGTGGGAATCT+AGG | 0.433657 | 1.4:-69206149 | MS.gene07314:CDS |
| TGGTGCTATGAGCCACTTAG+AGG | 0.441022 | 1.4:-69205953 | MS.gene07314:CDS |
| CATTACCAGTCCCAGCATAA+AGG | 0.447077 | 1.4:+69206292 | None:intergenic |
| TCAGTTGGTTAATGTTATGA+AGG | 0.448455 | 1.4:-69206574 | MS.gene07314:CDS |
| TCTTGCTGAGCCTTTATGCT+GGG | 0.452519 | 1.4:-69206302 | MS.gene07314:CDS |
| GATAGCTCCGATTGGTCACC+GGG | 0.462784 | 1.4:+69206226 | None:intergenic |
| CATAAAGGCTCAGCAAGAAA+TGG | 0.465952 | 1.4:+69206307 | None:intergenic |
| TTAAAGAGGTTTATAGAGTG+TGG | 0.469721 | 1.4:-69206269 | MS.gene07314:CDS |
| ATTTGATGTCTATGTATATG+AGG | 0.470560 | 1.4:-69206620 | MS.gene07314:CDS |
| CGTCTGCGACACGGTTCCTC+CGG | 0.470565 | 1.4:+69207846 | None:intergenic |
| TTTCTAGGTCGGCTAGTCTT+CGG | 0.471475 | 1.4:+69207872 | None:intergenic |
| GCACTTACAGCTTGTGGTGA+AGG | 0.473435 | 1.4:+69205895 | None:intergenic |
| TGGTATTCATACAGTATTGA+AGG | 0.474569 | 1.4:-69205746 | MS.gene07314:CDS |
| TATGTGTACTTGTTCTTAGC+AGG | 0.476882 | 1.4:+69206750 | None:intergenic |
| GTTTGATTTCCGGCGGAGGA+AGG | 0.482051 | 1.4:-69207960 | MS.gene07314:CDS |
| AGAGACTCTGAGATGAATTA+CGG | 0.482119 | 1.4:-69207985 | None:intergenic |
| TAAAGAGGTTTATAGAGTGT+GGG | 0.486756 | 1.4:-69206268 | MS.gene07314:CDS |
| CTGAGCCTTTATGCTGGGAC+TGG | 0.488058 | 1.4:-69206297 | MS.gene07314:CDS |
| AGTTATGATTCTAGGTTGGT+TGG | 0.491947 | 1.4:-69206120 | MS.gene07314:CDS |
| ATAATCGAAGGGAAAGCCTT+AGG | 0.492451 | 1.4:-69207811 | MS.gene07314:CDS |
| TTCAACCACTCCTTTCACTT+TGG | 0.493231 | 1.4:+69206803 | None:intergenic |
| TACGATACTTTCGAAGCTCC+TGG | 0.493561 | 1.4:+69207764 | None:intergenic |
| CACCGGGGTGATCTTCTTGA+GGG | 0.494822 | 1.4:+69206242 | None:intergenic |
| TGTGCTGCTTTGAATGACCT+TGG | 0.495240 | 1.4:-69206501 | MS.gene07314:CDS |
| ATGAATACCAGGAGATGATT+CGG | 0.497054 | 1.4:+69205759 | None:intergenic |
| GGCCGTTTGATTTCCGGCGG+AGG | 0.498441 | 1.4:-69207964 | MS.gene07314:CDS |
| TCGGAGAAGCCTTCCTCCGC+CGG | 0.500205 | 1.4:+69207951 | None:intergenic |
| AGATCACCCCGGTGACCAAT+CGG | 0.504230 | 1.4:-69206233 | MS.gene07314:CDS |
| TGAACTCGAGAGATGCGTCC+AGG | 0.504375 | 1.4:-69207782 | MS.gene07314:CDS |
| GCTGCTATCTATATAAAAGC+TGG | 0.505469 | 1.4:-69206402 | MS.gene07314:CDS |
| TTCCTCCGCCGGAAATCAAA+CGG | 0.507328 | 1.4:+69207962 | None:intergenic |
| GGTCGGCTAGTCTTCGGTAA+AGG | 0.515798 | 1.4:+69207878 | None:intergenic |
| TGAGGTTGAACGTGTTTATG+AGG | 0.516026 | 1.4:-69206478 | MS.gene07314:CDS |
| TGTTAGTTATGATTCTAGGT+TGG | 0.519722 | 1.4:-69206124 | MS.gene07314:CDS |
| AAGATGAAGACAAAATTGAC+TGG | 0.525053 | 1.4:-69206443 | MS.gene07314:CDS |
| TACTTGTTCTTAGCAGGAGG+AGG | 0.531968 | 1.4:+69206756 | None:intergenic |
| TGGGACTGGTAATGTTAAAG+AGG | 0.532622 | 1.4:-69206283 | MS.gene07314:CDS |
| AGATAGCTCCGATTGGTCAC+CGG | 0.533726 | 1.4:+69206225 | None:intergenic |
| ATTTCCCGAATCCTAAAGAA+AGG | 0.537745 | 1.4:+69206012 | None:intergenic |
| TGCTTTGAATGACCTTGGTG+AGG | 0.538207 | 1.4:-69206496 | MS.gene07314:CDS |
| TCACCGGGGTGATCTTCTTG+AGG | 0.539174 | 1.4:+69206241 | None:intergenic |
| TTGGAGAAAGGTCAATTGGA+TGG | 0.539563 | 1.4:-69205973 | MS.gene07314:CDS |
| AGAAAAGCACTTACAGCTTG+TGG | 0.542366 | 1.4:+69205889 | None:intergenic |
| AAAGAGGTTTATAGAGTGTG+GGG | 0.547043 | 1.4:-69206267 | MS.gene07314:CDS |
| GAAGCTCTCAAGAGCTGCAG+AGG | 0.547848 | 1.4:-69206036 | MS.gene07314:CDS |
| AGCTGAGCTTCCAAATAAGA+AGG | 0.548369 | 1.4:-69207905 | MS.gene07314:CDS |
| GATCTTGTGTCCAAAGTGAA+AGG | 0.549809 | 1.4:-69206813 | MS.gene07314:CDS |
| ACTGCATCCGAATCATCTCC+TGG | 0.552993 | 1.4:-69205766 | MS.gene07314:CDS |
| AGAAATGGTAAGTTTCGCGT+TGG | 0.553517 | 1.4:+69206322 | None:intergenic |
| TTACAGCTTGTGGTGAAGGT+TGG | 0.556374 | 1.4:+69205899 | None:intergenic |
| TAATAAAATTGTTTAAGGAG+TGG | 0.559489 | 1.4:-69206158 | MS.gene07314:CDS |
| TTCAATACTGTATGAATACC+AGG | 0.559830 | 1.4:+69205748 | None:intergenic |
| TCCCAAGTTACAAATTCTCG+TGG | 0.560694 | 1.4:+69205701 | None:intergenic |
| TTGAACCAGTATATAATCGA+AGG | 0.561352 | 1.4:-69207823 | MS.gene07314:CDS |
| ATTGGTTGCAGATAATGGAA+TGG | 0.561950 | 1.4:-69206887 | MS.gene07314:intron |
| AGCTGAGTTGATGCTTAAGA+AGG | 0.568467 | 1.4:-69206367 | MS.gene07314:CDS |
| TGGTAAGTTTCGCGTTGGCG+CGG | 0.569478 | 1.4:+69206327 | None:intergenic |
| CTGAAAGTGCGGCCTCTAAG+TGG | 0.571070 | 1.4:+69205941 | None:intergenic |
| ATGTCTATGTATATGAGGCT+AGG | 0.571867 | 1.4:-69206615 | MS.gene07314:CDS |
| TAGATTCCATCATGCATTCG+AGG | 0.573744 | 1.4:-69207743 | MS.gene07314:intron |
| CATGGACAAGGAAGCTGTGT+CGG | 0.574022 | 1.4:-69206067 | MS.gene07314:CDS |
| CTGGTTCAACGTCTGCGACA+CGG | 0.577943 | 1.4:+69207837 | None:intergenic |
| ACCGTCGAAAGTTCCTCAGT+TGG | 0.578763 | 1.4:-69206589 | MS.gene07314:CDS |
| ACGACTATGCACGGCTGCGA+CGG | 0.581337 | 1.4:-69207929 | MS.gene07314:CDS |
| TAGAAGGCTTAATGATATGG+AGG | 0.581977 | 1.4:-69206184 | MS.gene07314:CDS |
| GAGGCCGCACTTTCAGAAGT+CGG | 0.583270 | 1.4:-69205934 | MS.gene07314:CDS |
| ACCAACTGAGGAACTTTCGA+CGG | 0.585028 | 1.4:+69206588 | None:intergenic |
| CATAATAAGATAGCTCCGAT+TGG | 0.585163 | 1.4:+69206218 | None:intergenic |
| GCGATACCTCGAATGCATGA+TGG | 0.585983 | 1.4:+69207737 | None:intergenic |
| GTGTACTTGTTCTTAGCAGG+AGG | 0.589015 | 1.4:+69206753 | None:intergenic |
| TGGTTAATGTTATGAAGGAG+AGG | 0.593769 | 1.4:-69206569 | MS.gene07314:CDS |
| TTCATAACATTAACCAACTG+AGG | 0.600464 | 1.4:+69206576 | None:intergenic |
| AGAAGGCTTAATGATATGGA+GGG | 0.604451 | 1.4:-69206183 | MS.gene07314:CDS |
| GCTAAGAACAAGTACACATA+CGG | 0.606065 | 1.4:-69206747 | MS.gene07314:CDS |
| TCTTCTAAACTGTTACTGCA+AGG | 0.614146 | 1.4:-69206721 | MS.gene07314:CDS |
| TACGGCCGTTTGATTTCCGG+CGG | 0.616646 | 1.4:-69207967 | MS.gene07314:CDS |
| GGCTTACTTGAGTCAAAACA+TGG | 0.616784 | 1.4:-69206085 | MS.gene07314:CDS |
| CCCAAGTTACAAATTCTCGT+GGG | 0.622015 | 1.4:+69205702 | None:intergenic |
| CTTGAGTCAAAACATGGACA+AGG | 0.623542 | 1.4:-69206079 | MS.gene07314:CDS |
| AAGAGGTTTATAGAGTGTGG+GGG | 0.627275 | 1.4:-69206266 | MS.gene07314:CDS |
| TGAACCAGTATATAATCGAA+GGG | 0.630767 | 1.4:-69207822 | MS.gene07314:CDS |
| TCGCAGCCGTGCATAGTCGT+CGG | 0.630947 | 1.4:+69207932 | None:intergenic |
| CTAGCCGACCTAGAAAAGAC+CGG | 0.635101 | 1.4:-69207865 | MS.gene07314:CDS |
| TGAGTTGATGCTTAAGAAGG+TGG | 0.644162 | 1.4:-69206364 | MS.gene07314:CDS |
| TAATGGAATGGATGATGATG+AGG | 0.652324 | 1.4:-69206875 | MS.gene07314:CDS |
| CAAGGAACTAATGCTAGACA+AGG | 0.652550 | 1.4:-69206703 | MS.gene07314:CDS |
| GACCCTCAAGAAGATCACCC+CGG | 0.654594 | 1.4:-69206244 | MS.gene07314:CDS |
| ATCGCCGACTTCTGAAAGTG+CGG | 0.674194 | 1.4:+69205930 | None:intergenic |
| GCTTCTCCGACGACTATGCA+CGG | 0.690136 | 1.4:-69207938 | MS.gene07314:CDS |
| GCCGACCTAGAAAAGACCGG+AGG | 0.743237 | 1.4:-69207862 | MS.gene07314:CDS |
| TGTGTCCAAAGTGAAAGGAG+TGG | 0.764655 | 1.4:-69206808 | MS.gene07314:CDS |
| AAACACGTTCAACCTCACCA+AGG | 0.766259 | 1.4:+69206484 | None:intergenic |
| ATAGCTCCGATTGGTCACCG+GGG | 0.806286 | 1.4:+69206227 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATGATGTTTTGAT+TGG | - | chr1.4:69206776-69206795 | MS.gene07314:CDS | 15.0% |
| !! | AATAAAATTGTTTAAGGAGT+GGG | - | chr1.4:69207524-69207543 | MS.gene07314:intron | 20.0% |
| !! | AGATTTAAAGATTAACAAGT+TGG | - | chr1.4:69206624-69206643 | MS.gene07314:CDS | 20.0% |
| !! | TAATAAAATTGTTTAAGGAG+TGG | - | chr1.4:69207523-69207542 | MS.gene07314:intron | 20.0% |
| !! | TCAACATGAATCAAAATTTA+GGG | + | chr1.4:69205992-69206011 | None:intergenic | 20.0% |
| !! | TTGTTAATAAATGAATCAAC+TGG | - | chr1.4:69206243-69206262 | MS.gene07314:CDS | 20.0% |
| ! | AAAATTAGTTAGAGTCGTTT+AGG | + | chr1.4:69206089-69206108 | None:intergenic | 25.0% |
| ! | ACTAATTATGTTCTGTGTAA+TGG | - | chr1.4:69206207-69206226 | MS.gene07314:CDS | 25.0% |
| ! | ATTTGATGTCTATGTATATG+AGG | - | chr1.4:69207061-69207080 | MS.gene07314:intron | 25.0% |
| ! | CATATACATAGACATCAAAT+TGG | + | chr1.4:69207061-69207080 | None:intergenic | 25.0% |
| ! | CTCAACATGAATCAAAATTT+AGG | + | chr1.4:69205993-69206012 | None:intergenic | 25.0% |
| ! | GGGCATAATAAAATTGTTTA+AGG | - | chr1.4:69207518-69207537 | MS.gene07314:intron | 25.0% |
| ! | TAGTATATGATAGAACACTA+TGG | - | chr1.4:69206656-69206675 | MS.gene07314:CDS | 25.0% |
| ! | TTATATAGTAGTCACAAGAT+CGG | - | chr1.4:69206308-69206327 | MS.gene07314:CDS | 25.0% |
| ! | TTTGATAAGATGGATGAATT+AGG | - | chr1.4:69207012-69207031 | MS.gene07314:intron | 25.0% |
| !! | AAAGATTAACAAGTTGGATA+GGG | - | chr1.4:69206630-69206649 | MS.gene07314:CDS | 25.0% |
| !! | AAATTTAGGGTGGAAAAAAT+TGG | + | chr1.4:69205979-69205998 | None:intergenic | 25.0% |
| !! | CTGAATTTACATACATTTTG+TGG | - | chr1.4:69207148-69207167 | MS.gene07314:intron | 25.0% |
| !! | GAGGCAAATTAATTTTTCAT+GGG | - | chr1.4:69206825-69206844 | MS.gene07314:CDS | 25.0% |
| !! | TAAAGATTAACAAGTTGGAT+AGG | - | chr1.4:69206629-69206648 | MS.gene07314:CDS | 25.0% |
| !! | TGAGGCAAATTAATTTTTCA+TGG | - | chr1.4:69206824-69206843 | MS.gene07314:CDS | 25.0% |
| !!! | AATGTTCATGGTGTTTTTAT+TGG | - | chr1.4:69207689-69207708 | MS.gene07314:intron | 25.0% |
| !!! | AGTAATGCAAGTTTTAATAG+AGG | + | chr1.4:69207898-69207917 | None:intergenic | 25.0% |
| !!! | ATTGTCTCATTTTGATAAGA+TGG | - | chr1.4:69207002-69207021 | MS.gene07314:intron | 25.0% |
| !!! | TTTACCATCTTTTTTACGAT+AGG | + | chr1.4:69206466-69206485 | None:intergenic | 25.0% |
| AAGATGAAGACAAAATTGAC+TGG | - | chr1.4:69207238-69207257 | MS.gene07314:intron | 30.0% | |
| ACATGAATCAAAATTTAGGG+TGG | + | chr1.4:69205989-69206008 | None:intergenic | 30.0% | |
| ATGACAATATTAGAGAGAGT+TGG | - | chr1.4:69206433-69206452 | MS.gene07314:CDS | 30.0% | |
| ATGAGTTAAGCAAGATTCTT+AGG | - | chr1.4:69207853-69207872 | MS.gene07314:CDS | 30.0% | |
| TAAAGAGGTTTATAGAGTGT+GGG | - | chr1.4:69207413-69207432 | MS.gene07314:intron | 30.0% | |
| TAAAGGTTTGCCTTCTTATT+TGG | + | chr1.4:69205789-69205808 | None:intergenic | 30.0% | |
| TCAGTTGGTTAATGTTATGA+AGG | - | chr1.4:69207107-69207126 | MS.gene07314:intron | 30.0% | |
| TGAACCAGTATATAATCGAA+GGG | - | chr1.4:69205859-69205878 | MS.gene07314:CDS | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | chr1.4:69206434-69206453 | MS.gene07314:CDS | 30.0% | |
| TGATGATAAACTATGAAGCA+TGG | + | chr1.4:69206167-69206186 | None:intergenic | 30.0% | |
| TGTTAGTTATGATTCTAGGT+TGG | - | chr1.4:69207557-69207576 | MS.gene07314:intron | 30.0% | |
| TTAAAGAGGTTTATAGAGTG+TGG | - | chr1.4:69207412-69207431 | MS.gene07314:intron | 30.0% | |
| TTATGCTTTCTAACCTTAGA+AGG | - | chr1.4:69207481-69207500 | MS.gene07314:intron | 30.0% | |
| TTCAATACTGTATGAATACC+AGG | + | chr1.4:69207936-69207955 | None:intergenic | 30.0% | |
| TTCATAACATTAACCAACTG+AGG | + | chr1.4:69207108-69207127 | None:intergenic | 30.0% | |
| TTGAACCAGTATATAATCGA+AGG | - | chr1.4:69205858-69205877 | MS.gene07314:CDS | 30.0% | |
| TTTATTGGAGAAAGGTCAAT+TGG | - | chr1.4:69207704-69207723 | MS.gene07314:intron | 30.0% | |
| ! | ACATACATTTTGTGGATGAA+TGG | - | chr1.4:69207156-69207175 | MS.gene07314:intron | 30.0% |
| ! | AGATGGTAAAAGTTTGACTT+AGG | - | chr1.4:69206476-69206495 | MS.gene07314:CDS | 30.0% |
| ! | CTTTTATATAGATAGCAGCA+AGG | + | chr1.4:69207278-69207297 | None:intergenic | 30.0% |
| ! | TGGTATTCATACAGTATTGA+AGG | - | chr1.4:69207935-69207954 | MS.gene07314:CDS | 30.0% |
| !! | ATGGTGTTTTTATTGGAGAA+AGG | - | chr1.4:69207696-69207715 | MS.gene07314:intron | 30.0% |
| !! | TTTTGATTGGTTGCAGATAA+TGG | - | chr1.4:69206789-69206808 | MS.gene07314:CDS | 30.0% |
| !!! | AATTAGTTTTGCCTTGTCTA+TGG | + | chr1.4:69206194-69206213 | None:intergenic | 30.0% |
| !!! | CGCTTATTTTATTCTCATGT+TGG | + | chr1.4:69206360-69206379 | None:intergenic | 30.0% |
| AAAGAGGTTTATAGAGTGTG+GGG | - | chr1.4:69207414-69207433 | MS.gene07314:intron | 35.0% | |
| AGAAGGCTTAATGATATGGA+GGG | - | chr1.4:69207498-69207517 | MS.gene07314:intron | 35.0% | |
| AGCACCTATCGTAAAAAAGA+TGG | - | chr1.4:69206459-69206478 | MS.gene07314:CDS | 35.0% | |
| ATCATCACAATCCATAGACA+AGG | - | chr1.4:69206180-69206199 | MS.gene07314:CDS | 35.0% | |
| ATGAATACCAGGAGATGATT+CGG | + | chr1.4:69207925-69207944 | None:intergenic | 35.0% | |
| ATGTCTATGTATATGAGGCT+AGG | - | chr1.4:69207066-69207085 | MS.gene07314:intron | 35.0% | |
| ATTTCCCGAATCCTAAAGAA+AGG | + | chr1.4:69207672-69207691 | None:intergenic | 35.0% | |
| CATAATAAGATAGCTCCGAT+TGG | + | chr1.4:69207466-69207485 | None:intergenic | 35.0% | |
| CCATATCATTAAGCCTTCTA+AGG | + | chr1.4:69207497-69207516 | None:intergenic | 35.0% | |
| CCTTAGAAGGCTTAATGATA+TGG | - | chr1.4:69207494-69207513 | MS.gene07314:intron | 35.0% | |
| CTTTCCCTTCGATTATATAC+TGG | + | chr1.4:69205866-69205885 | None:intergenic | 35.0% | |
| GAAGAAGAAACAGATCTTGA+TGG | - | chr1.4:69207825-69207844 | MS.gene07314:CDS | 35.0% | |
| GCTAAGAACAAGTACACATA+CGG | - | chr1.4:69206934-69206953 | MS.gene07314:intron | 35.0% | |
| GCTGCTATCTATATAAAAGC+TGG | - | chr1.4:69207279-69207298 | MS.gene07314:intron | 35.0% | |
| GGCATGTTAGTTATGATTCT+AGG | - | chr1.4:69207553-69207572 | MS.gene07314:intron | 35.0% | |
| TAGAAGGCTTAATGATATGG+AGG | - | chr1.4:69207497-69207516 | MS.gene07314:intron | 35.0% | |
| TATGTGTACTTGTTCTTAGC+AGG | + | chr1.4:69206934-69206953 | None:intergenic | 35.0% | |
| TCTTCTAAACTGTTACTGCA+AGG | - | chr1.4:69206960-69206979 | MS.gene07314:intron | 35.0% | |
| TGGTTAATGTTATGAAGGAG+AGG | - | chr1.4:69207112-69207131 | MS.gene07314:intron | 35.0% | |
| ! | AAATGAATCAACTGGCTTAG+TGG | - | chr1.4:69206251-69206270 | MS.gene07314:CDS | 35.0% |
| ! | CAAGTCTTATCCCACTAATT+GGG | + | chr1.4:69206706-69206725 | None:intergenic | 35.0% |
| ! | GACCTGTAGATTTTGTAGTA+CGG | - | chr1.4:69206521-69206540 | MS.gene07314:CDS | 35.0% |
| ! | TAATGGAATGGATGATGATG+AGG | - | chr1.4:69206806-69206825 | MS.gene07314:CDS | 35.0% |
| ! | TGGTAAAAGTTTGACTTAGG+TGG | - | chr1.4:69206479-69206498 | MS.gene07314:CDS | 35.0% |
| !! | AGTTATGATTCTAGGTTGGT+TGG | - | chr1.4:69207561-69207580 | MS.gene07314:intron | 35.0% |
| !! | ATTGGTTGCAGATAATGGAA+TGG | - | chr1.4:69206794-69206813 | MS.gene07314:CDS | 35.0% |
| AAGAGGTTTATAGAGTGTGG+GGG | - | chr1.4:69207415-69207434 | MS.gene07314:intron | 40.0% | |
| ACAAGATCGGTGATGTTGTA+TGG | - | chr1.4:69206321-69206340 | MS.gene07314:CDS | 40.0% | |
| AGAAATGGTAAGTTTCGCGT+TGG | + | chr1.4:69207362-69207381 | None:intergenic | 40.0% | |
| AGCTGAGCTTCCAAATAAGA+AGG | - | chr1.4:69205776-69205795 | MS.gene07314:CDS | 40.0% | |
| ATAATCGAAGGGAAAGCCTT+AGG | - | chr1.4:69205870-69205889 | MS.gene07314:CDS | 40.0% | |
| CAAGGAACTAATGCTAGACA+AGG | - | chr1.4:69206978-69206997 | MS.gene07314:intron | 40.0% | |
| CATAAAGGCTCAGCAAGAAA+TGG | + | chr1.4:69207377-69207396 | None:intergenic | 40.0% | |
| CCAATTAGTGGGATAAGACT+TGG | - | chr1.4:69206704-69206723 | MS.gene07314:CDS | 40.0% | |
| CTCCGTACTACAAAATCTAC+AGG | + | chr1.4:69206526-69206545 | None:intergenic | 40.0% | |
| CTTATCCCACTAATTGGGAT+CGG | + | chr1.4:69206701-69206720 | None:intergenic | 40.0% | |
| CTTGAGTCAAAACATGGACA+AGG | - | chr1.4:69207602-69207621 | MS.gene07314:intron | 40.0% | |
| GATCTTGTGTCCAAAGTGAA+AGG | - | chr1.4:69206868-69206887 | MS.gene07314:CDS | 40.0% | |
| GGCTTACTTGAGTCAAAACA+TGG | - | chr1.4:69207596-69207615 | MS.gene07314:intron | 40.0% | |
| TAGATTCCATCATGCATTCG+AGG | - | chr1.4:69205938-69205957 | MS.gene07314:CDS | 40.0% | |
| TAGGATTCGGGAAATGTTCA+TGG | - | chr1.4:69207677-69207696 | MS.gene07314:intron | 40.0% | |
| TGAGGTTGAACGTGTTTATG+AGG | - | chr1.4:69207203-69207222 | MS.gene07314:intron | 40.0% | |
| TGATTTGACTAACCTCCATC+TGG | + | chr1.4:69206555-69206574 | None:intergenic | 40.0% | |
| TGTTTAAGGAGTGGGAATCT+AGG | - | chr1.4:69207532-69207551 | MS.gene07314:intron | 40.0% | |
| TTCAACCACTCCTTTCACTT+TGG | + | chr1.4:69206881-69206900 | None:intergenic | 40.0% | |
| TTGGAGAAAGGTCAATTGGA+TGG | - | chr1.4:69207708-69207727 | MS.gene07314:intron | 40.0% | |
| ! | AAAGTACCACTCAAGCTGAA+GGG | - | chr1.4:69206281-69206300 | MS.gene07314:CDS | 40.0% |
| ! | AAGTTTGACTTAGGTGGTCT+AGG | - | chr1.4:69206485-69206504 | MS.gene07314:CDS | 40.0% |
| ! | AATTACGGCCGTTTGATTTC+CGG | - | chr1.4:69205711-69205730 | MS.gene07314:CDS | 40.0% |
| ! | CCAAGTCTTATCCCACTAAT+TGG | + | chr1.4:69206707-69206726 | None:intergenic | 40.0% |
| ! | CTCGAGTTCATCTTTTCCTA+AGG | + | chr1.4:69205889-69205908 | None:intergenic | 40.0% |
| ! | GAGGTTAGTCAAATCACTTG+AGG | - | chr1.4:69206559-69206578 | MS.gene07314:CDS | 40.0% |
| ! | TAAAGTACCACTCAAGCTGA+AGG | - | chr1.4:69206280-69206299 | MS.gene07314:CDS | 40.0% |
| ! | TGGGACTGGTAATGTTAAAG+AGG | - | chr1.4:69207398-69207417 | MS.gene07314:intron | 40.0% |
| !! | AGAAAAGCACTTACAGCTTG+TGG | + | chr1.4:69207795-69207814 | None:intergenic | 40.0% |
| !! | AGCTGAGTTGATGCTTAAGA+AGG | - | chr1.4:69207314-69207333 | MS.gene07314:intron | 40.0% |
| !! | AGGACCTTTCTTTAGGATTC+GGG | - | chr1.4:69207665-69207684 | MS.gene07314:intron | 40.0% |
| !! | GAGGACCTTTCTTTAGGATT+CGG | - | chr1.4:69207664-69207683 | MS.gene07314:intron | 40.0% |
| !! | GTAACATCGACTCTGATTGA+AGG | - | chr1.4:69206028-69206047 | MS.gene07314:CDS | 40.0% |
| !! | TGAGTTGATGCTTAAGAAGG+TGG | - | chr1.4:69207317-69207336 | MS.gene07314:intron | 40.0% |
| AAACACGTTCAACCTCACCA+AGG | + | chr1.4:69207200-69207219 | None:intergenic | 45.0% | |
| AATTGTCCCTTCAGCTTGAG+TGG | + | chr1.4:69206290-69206309 | None:intergenic | 45.0% | |
| ACCAACTGAGGAACTTTCGA+CGG | + | chr1.4:69207096-69207115 | None:intergenic | 45.0% | |
| ACTAATTGGGATCGGCTACA+TGG | + | chr1.4:69206693-69206712 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | - | chr1.4:69206391-69206410 | MS.gene07314:CDS | 45.0% | |
| AGTCAAATCACTTGAGGCAG+AGG | - | chr1.4:69206565-69206584 | MS.gene07314:CDS | 45.0% | |
| ATGTAGCCGATCCCAATTAG+TGG | - | chr1.4:69206692-69206711 | MS.gene07314:CDS | 45.0% | |
| CATTACCAGTCCCAGCATAA+AGG | + | chr1.4:69207392-69207411 | None:intergenic | 45.0% | |
| GTGTACTTGTTCTTAGCAGG+AGG | + | chr1.4:69206931-69206950 | None:intergenic | 45.0% | |
| TACGATACTTTCGAAGCTCC+TGG | + | chr1.4:69205920-69205939 | None:intergenic | 45.0% | |
| TACTTGTTCTTAGCAGGAGG+AGG | + | chr1.4:69206928-69206947 | None:intergenic | 45.0% | |
| TCTTGCTGAGCCTTTATGCT+GGG | - | chr1.4:69207379-69207398 | MS.gene07314:intron | 45.0% | |
| TGTAGCCGATCCCAATTAGT+GGG | - | chr1.4:69206693-69206712 | MS.gene07314:CDS | 45.0% | |
| TGTGTCCAAAGTGAAAGGAG+TGG | - | chr1.4:69206873-69206892 | MS.gene07314:CDS | 45.0% | |
| TTACAGCTTGTGGTGAAGGT+TGG | + | chr1.4:69207785-69207804 | None:intergenic | 45.0% | |
| TTCTTGCTGAGCCTTTATGC+TGG | - | chr1.4:69207378-69207397 | MS.gene07314:intron | 45.0% | |
| ! | AGTGGGATAAGACTTGGTTG+TGG | - | chr1.4:69206710-69206729 | MS.gene07314:CDS | 45.0% |
| ! | TGCTTTGAATGACCTTGGTG+AGG | - | chr1.4:69207185-69207204 | MS.gene07314:intron | 45.0% |
| !! | TGTGCTGCTTTGAATGACCT+TGG | - | chr1.4:69207180-69207199 | MS.gene07314:intron | 45.0% |
| !! | TTTCTAGGTCGGCTAGTCTT+CGG | + | chr1.4:69205812-69205831 | None:intergenic | 45.0% |
| AAATAAGCGTAGCCGAGACG+AGG | - | chr1.4:69206371-69206390 | MS.gene07314:CDS | 50.0% | |
| ACCGTCGAAAGTTCCTCAGT+TGG | - | chr1.4:69207092-69207111 | MS.gene07314:intron | 50.0% | |
| ACTGCATCCGAATCATCTCC+TGG | - | chr1.4:69207915-69207934 | MS.gene07314:CDS | 50.0% | |
| AGTACGGAGAGTAGACCAGA+TGG | - | chr1.4:69206537-69206556 | MS.gene07314:CDS | 50.0% | |
| CATGGACAAGGAAGCTGTGT+CGG | - | chr1.4:69207614-69207633 | MS.gene07314:intron | 50.0% | |
| CCAACACAACATCCTCGTCT+CGG | + | chr1.4:69206386-69206405 | None:intergenic | 50.0% | |
| CTAGCCGACCTAGAAAAGAC+CGG | - | chr1.4:69205816-69205835 | MS.gene07314:CDS | 50.0% | |
| GCACTTACAGCTTGTGGTGA+AGG | + | chr1.4:69207789-69207808 | None:intergenic | 50.0% | |
| GCGATACCTCGAATGCATGA+TGG | + | chr1.4:69205947-69205966 | None:intergenic | 50.0% | |
| GCTGCAGAGGACCTTTCTTT+AGG | - | chr1.4:69207658-69207677 | MS.gene07314:intron | 50.0% | |
| GTCGTTTAGGTGTCAGACAC+CGG | + | chr1.4:69206076-69206095 | None:intergenic | 50.0% | |
| TTCCTCCGCCGGAAATCAAA+CGG | + | chr1.4:69205722-69205741 | None:intergenic | 50.0% | |
| ! | AGATAGCTCCGATTGGTCAC+CGG | + | chr1.4:69207459-69207478 | None:intergenic | 50.0% |
| ! | TCCTCCGGTCTTTTCTAGGT+CGG | + | chr1.4:69205823-69205842 | None:intergenic | 50.0% |
| !! | ATCGCCGACTTCTGAAAGTG+CGG | + | chr1.4:69207754-69207773 | None:intergenic | 50.0% |
| !! | TGGTGCTATGAGCCACTTAG+AGG | - | chr1.4:69207728-69207747 | MS.gene07314:intron | 50.0% |
| ACGGAGAGTAGACCAGATGG+AGG | - | chr1.4:69206540-69206559 | MS.gene07314:CDS | 55.0% | |
| AGATCACCCCGGTGACCAAT+CGG | - | chr1.4:69207448-69207467 | MS.gene07314:intron | 55.0% | |
| CACCGGGGTGATCTTCTTGA+GGG | + | chr1.4:69207442-69207461 | None:intergenic | 55.0% | |
| CCGAGACGAGGATGTTGTGT+TGG | - | chr1.4:69206383-69206402 | MS.gene07314:CDS | 55.0% | |
| CTGAGCCTTTATGCTGGGAC+TGG | - | chr1.4:69207384-69207403 | MS.gene07314:intron | 55.0% | |
| CTGGTTCAACGTCTGCGACA+CGG | + | chr1.4:69205847-69205866 | None:intergenic | 55.0% | |
| GAAGCTCTCAAGAGCTGCAG+AGG | - | chr1.4:69207645-69207664 | MS.gene07314:intron | 55.0% | |
| GACCCTCAAGAAGATCACCC+CGG | - | chr1.4:69207437-69207456 | MS.gene07314:intron | 55.0% | |
| GAGGCCGCACTTTCAGAAGT+CGG | - | chr1.4:69207747-69207766 | MS.gene07314:CDS | 55.0% | |
| GCTTCTCCGACGACTATGCA+CGG | - | chr1.4:69205743-69205762 | MS.gene07314:CDS | 55.0% | |
| GTTCCGTGTCCAACACTTGC+CGG | - | chr1.4:69206054-69206073 | MS.gene07314:CDS | 55.0% | |
| TCACCGGGGTGATCTTCTTG+AGG | + | chr1.4:69207443-69207462 | None:intergenic | 55.0% | |
| TGAACTCGAGAGATGCGTCC+AGG | - | chr1.4:69205899-69205918 | MS.gene07314:CDS | 55.0% | |
| TGTCAGACACCGGCAAGTGT+TGG | + | chr1.4:69206066-69206085 | None:intergenic | 55.0% | |
| ! | ATAGCTCCGATTGGTCACCG+GGG | + | chr1.4:69207457-69207476 | None:intergenic | 55.0% |
| ! | CGGTTCCTCCGGTCTTTTCT+AGG | + | chr1.4:69205827-69205846 | None:intergenic | 55.0% |
| ! | CTGAAAGTGCGGCCTCTAAG+TGG | + | chr1.4:69207743-69207762 | None:intergenic | 55.0% |
| ! | GATAGCTCCGATTGGTCACC+GGG | + | chr1.4:69207458-69207477 | None:intergenic | 55.0% |
| ! | GGAAGCTGTGTCGGTCTTTG+AGG | - | chr1.4:69207623-69207642 | MS.gene07314:intron | 55.0% |
| ! | GTTTGATTTCCGGCGGAGGA+AGG | - | chr1.4:69205721-69205740 | MS.gene07314:CDS | 55.0% |
| ! | TACGGCCGTTTGATTTCCGG+CGG | - | chr1.4:69205714-69205733 | MS.gene07314:CDS | 55.0% |
| ! | TGGTAAGTTTCGCGTTGGCG+CGG | + | chr1.4:69207357-69207376 | None:intergenic | 55.0% |
| !! | ACACCGGCAAGTGTTGGACA+CGG | + | chr1.4:69206060-69206079 | None:intergenic | 55.0% |
| !! | GGTCGGCTAGTCTTCGGTAA+AGG | + | chr1.4:69205806-69205825 | None:intergenic | 55.0% |
| !! | GTTGGTTGGTGTTGCAGTGC+AGG | - | chr1.4:69207575-69207594 | MS.gene07314:intron | 55.0% |
| ACGACTATGCACGGCTGCGA+CGG | - | chr1.4:69205752-69205771 | MS.gene07314:CDS | 60.0% | |
| GCCGACCTAGAAAAGACCGG+AGG | - | chr1.4:69205819-69205838 | MS.gene07314:CDS | 60.0% | |
| TCGCAGCCGTGCATAGTCGT+CGG | + | chr1.4:69205752-69205771 | None:intergenic | 60.0% | |
| CGTCTGCGACACGGTTCCTC+CGG | + | chr1.4:69205838-69205857 | None:intergenic | 65.0% | |
| TCGGAGAAGCCTTCCTCCGC+CGG | + | chr1.4:69205733-69205752 | None:intergenic | 65.0% | |
| ! | GGCCGTTTGATTTCCGGCGG+AGG | - | chr1.4:69205717-69205736 | MS.gene07314:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 69205708 | 69207995 | 69205708 | ID=MS.gene07314 |
| chr1.4 | mRNA | 69205708 | 69207995 | 69205708 | ID=MS.gene07314.t1;Parent=MS.gene07314 |
| chr1.4 | exon | 69207744 | 69207995 | 69207744 | ID=MS.gene07314.t1.exon1;Parent=MS.gene07314.t1 |
| chr1.4 | CDS | 69207744 | 69207995 | 69207744 | ID=cds.MS.gene07314.t1;Parent=MS.gene07314.t1 |
| chr1.4 | exon | 69205708 | 69206898 | 69205708 | ID=MS.gene07314.t1.exon2;Parent=MS.gene07314.t1 |
| chr1.4 | CDS | 69205708 | 69206898 | 69205708 | ID=cds.MS.gene07314.t1;Parent=MS.gene07314.t1 |
| Gene Sequence |
| Protein sequence |
