Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073334.t1 | XP_003610029.2 | 91.4 | 186 | 3 | 2 | 1 | 173 | 1 | 186 | 1.60E-82 | 315.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073334.t1 | Q9FKK2 | 38.6 | 166 | 90 | 3 | 8 | 162 | 3 | 167 | 8.3e-24 | 111.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073334.t1 | G7JTA2 | 91.4 | 186 | 3 | 2 | 1 | 173 | 1 | 186 | 1.1e-82 | 315.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene073334.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene073334 | 0.806724 | 7.16E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene073334 | 0.829857 | 4.07E-55 | -1.69E-46 |
| MS.gene049419 | MS.gene073334 | -0.81102 | 8.63E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene073334 | 0.823542 | 1.31E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene073334 | 0.81458 | 1.43E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene073334 | 0.800682 | 1.29E-48 | -1.69E-46 |
| MS.gene051699 | MS.gene073334 | 0.802414 | 5.67E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene073334 | 0.802023 | 6.83E-49 | -1.69E-46 |
| MS.gene052534 | MS.gene073334 | 0.803456 | 3.46E-49 | -1.69E-46 |
| MS.gene052686 | MS.gene073334 | 0.800569 | 1.36E-48 | -1.69E-46 |
| MS.gene053298 | MS.gene073334 | 0.802213 | 6.24E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene073334 | 0.806136 | 9.52E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene073334 | 0.828539 | 8.50E-55 | -1.69E-46 |
| MS.gene054222 | MS.gene073334 | 0.81967 | 1.03E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene073334 | 0.816775 | 4.65E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene073334 | 0.81231 | 4.52E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene073334 | 0.815889 | 7.33E-52 | -1.69E-46 |
| MS.gene055229 | MS.gene073334 | 0.800787 | 1.22E-48 | -1.69E-46 |
| MS.gene056272 | MS.gene073334 | 0.820669 | 6.07E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene073334 | 0.822246 | 2.63E-53 | -1.69E-46 |
| MS.gene056779 | MS.gene073334 | 0.804899 | 1.73E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene073334 | 0.806455 | 8.16E-50 | -1.69E-46 |
| MS.gene057155 | MS.gene073334 | 0.809795 | 1.59E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene073334 | 0.811115 | 8.23E-51 | -1.69E-46 |
| MS.gene058279 | MS.gene073334 | 0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene058592 | MS.gene073334 | 0.808854 | 2.52E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene073334 | 0.817887 | 2.61E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene073334 | -0.805793 | 1.12E-49 | -1.69E-46 |
| MS.gene060012 | MS.gene073334 | 0.81134 | 7.35E-51 | -1.69E-46 |
| MS.gene060412 | MS.gene073334 | 0.816195 | 6.27E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene073334 | 0.813876 | 2.05E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene073334 | 0.809978 | 1.45E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073334.t1 | MTR_4g127140 | 91.935 | 186 | 2 | 2 | 1 | 173 | 1 | 186 | 1.54e-120 | 338 |
| MS.gene073334.t1 | MTR_2g105290 | 89.773 | 176 | 15 | 1 | 1 | 173 | 1 | 176 | 1.59e-113 | 320 |
| MS.gene073334.t1 | MTR_8g086290 | 70.060 | 167 | 47 | 1 | 1 | 164 | 1 | 167 | 6.15e-83 | 243 |
| MS.gene073334.t1 | MTR_7g028448 | 70.000 | 160 | 43 | 2 | 1 | 160 | 1 | 155 | 2.64e-70 | 210 |
| MS.gene073334.t1 | MTR_4g036915 | 70.000 | 160 | 43 | 2 | 1 | 160 | 1 | 155 | 2.64e-70 | 210 |
| MS.gene073334.t1 | MTR_1g105910 | 40.805 | 174 | 90 | 3 | 8 | 171 | 5 | 175 | 9.93e-42 | 140 |
| MS.gene073334.t1 | MTR_1g106070 | 41.379 | 174 | 88 | 4 | 8 | 171 | 5 | 174 | 1.48e-41 | 138 |
| MS.gene073334.t1 | MTR_1g012570 | 39.655 | 174 | 92 | 3 | 8 | 171 | 5 | 175 | 1.67e-40 | 137 |
| MS.gene073334.t1 | MTR_8g043650 | 40.936 | 171 | 88 | 3 | 8 | 168 | 5 | 172 | 1.69e-40 | 137 |
| MS.gene073334.t1 | MTR_3g052920 | 41.520 | 171 | 87 | 3 | 8 | 168 | 5 | 172 | 2.20e-40 | 136 |
| MS.gene073334.t1 | MTR_1g105920 | 39.181 | 171 | 91 | 3 | 8 | 168 | 5 | 172 | 5.11e-39 | 133 |
| MS.gene073334.t1 | MTR_2g030740 | 39.766 | 171 | 90 | 3 | 8 | 168 | 5 | 172 | 5.69e-39 | 133 |
| MS.gene073334.t1 | MTR_3g080940 | 40.116 | 172 | 96 | 2 | 6 | 170 | 3 | 174 | 1.42e-38 | 131 |
| MS.gene073334.t1 | MTR_1g108510 | 40.000 | 165 | 86 | 3 | 8 | 162 | 5 | 166 | 3.44e-35 | 123 |
| MS.gene073334.t1 | MTR_3g030770 | 40.000 | 165 | 86 | 3 | 8 | 162 | 5 | 166 | 6.92e-35 | 122 |
| MS.gene073334.t1 | MTR_2g093190 | 40.741 | 162 | 89 | 2 | 8 | 162 | 5 | 166 | 3.79e-34 | 120 |
| MS.gene073334.t1 | MTR_1g108580 | 38.182 | 165 | 89 | 3 | 8 | 162 | 5 | 166 | 8.05e-34 | 119 |
| MS.gene073334.t1 | MTR_1g105905 | 37.267 | 161 | 88 | 3 | 21 | 171 | 1 | 158 | 9.49e-33 | 116 |
| MS.gene073334.t1 | MTR_3g052870 | 43.077 | 130 | 64 | 2 | 8 | 130 | 5 | 131 | 1.05e-32 | 116 |
| MS.gene073334.t1 | MTR_1g077360 | 36.747 | 166 | 98 | 1 | 8 | 166 | 5 | 170 | 7.04e-32 | 114 |
| MS.gene073334.t1 | MTR_5g053390 | 36.994 | 173 | 98 | 3 | 8 | 171 | 5 | 175 | 1.40e-31 | 114 |
| MS.gene073334.t1 | MTR_1g075600 | 36.527 | 167 | 97 | 3 | 8 | 166 | 5 | 170 | 1.61e-31 | 114 |
| MS.gene073334.t1 | MTR_5g045560 | 35.758 | 165 | 99 | 3 | 8 | 165 | 5 | 169 | 3.51e-31 | 113 |
| MS.gene073334.t1 | MTR_2g085250 | 36.000 | 175 | 97 | 4 | 8 | 171 | 5 | 175 | 1.05e-29 | 109 |
| MS.gene073334.t1 | MTR_2g085280 | 36.000 | 175 | 97 | 4 | 8 | 171 | 5 | 175 | 1.08e-29 | 109 |
| MS.gene073334.t1 | MTR_0121s0100 | 42.520 | 127 | 63 | 2 | 8 | 127 | 5 | 128 | 1.01e-27 | 101 |
| MS.gene073334.t1 | MTR_5g055100 | 34.884 | 172 | 103 | 2 | 8 | 171 | 5 | 175 | 1.59e-27 | 103 |
| MS.gene073334.t1 | MTR_0121s0080 | 35.625 | 160 | 96 | 2 | 8 | 160 | 5 | 164 | 5.77e-27 | 102 |
| MS.gene073334.t1 | MTR_4g131030 | 53.165 | 79 | 37 | 0 | 11 | 89 | 1 | 79 | 3.73e-24 | 94.4 |
| MS.gene073334.t1 | MTR_8g079502 | 51.250 | 80 | 39 | 0 | 11 | 90 | 1 | 80 | 8.52e-24 | 92.4 |
| MS.gene073334.t1 | MTR_1g047550 | 50.000 | 80 | 40 | 0 | 11 | 90 | 1 | 80 | 1.70e-23 | 91.7 |
| MS.gene073334.t1 | MTR_8g046350 | 44.330 | 97 | 51 | 2 | 11 | 106 | 1 | 95 | 2.09e-23 | 90.9 |
| MS.gene073334.t1 | MTR_8g022970 | 34.375 | 160 | 95 | 3 | 5 | 158 | 15 | 170 | 5.58e-23 | 90.5 |
| MS.gene073334.t1 | MTR_4g094632 | 52.778 | 72 | 34 | 0 | 11 | 82 | 1 | 72 | 2.00e-22 | 88.2 |
| MS.gene073334.t1 | MTR_1g054265 | 53.521 | 71 | 33 | 0 | 11 | 81 | 1 | 71 | 3.07e-22 | 88.2 |
| MS.gene073334.t1 | MTR_1g063160 | 50.704 | 71 | 35 | 0 | 11 | 81 | 1 | 71 | 8.75e-22 | 87.0 |
| MS.gene073334.t1 | MTR_3g030780 | 50.685 | 73 | 36 | 0 | 8 | 80 | 5 | 77 | 1.79e-21 | 85.1 |
| MS.gene073334.t1 | MTR_8g051580 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 2.69e-21 | 85.9 |
| MS.gene073334.t1 | MTR_4g094638 | 48.052 | 77 | 40 | 0 | 11 | 87 | 1 | 77 | 1.27e-20 | 84.0 |
| MS.gene073334.t1 | MTR_7g062350 | 33.793 | 145 | 85 | 3 | 28 | 163 | 37 | 179 | 2.37e-20 | 85.1 |
| MS.gene073334.t1 | MTR_3g109930 | 31.944 | 144 | 93 | 2 | 20 | 158 | 10 | 153 | 4.00e-19 | 80.1 |
| MS.gene073334.t1 | MTR_0003s0590 | 37.805 | 164 | 84 | 5 | 11 | 169 | 1 | 151 | 5.24e-19 | 81.6 |
| MS.gene073334.t1 | MTR_3g067870 | 51.515 | 66 | 32 | 0 | 19 | 84 | 83 | 148 | 2.65e-18 | 77.4 |
| MS.gene073334.t1 | MTR_3g067875 | 58.491 | 53 | 22 | 0 | 24 | 76 | 4 | 56 | 3.18e-18 | 74.7 |
| MS.gene073334.t1 | MTR_3g452380 | 35.246 | 122 | 67 | 3 | 8 | 127 | 13 | 124 | 3.78e-18 | 79.0 |
| MS.gene073334.t1 | MTR_4g093970 | 37.126 | 167 | 90 | 4 | 11 | 164 | 27 | 191 | 4.39e-18 | 79.0 |
| MS.gene073334.t1 | MTR_5g032520 | 37.500 | 120 | 71 | 2 | 11 | 126 | 1 | 120 | 4.63e-18 | 78.6 |
| MS.gene073334.t1 | MTR_3g437790 | 34.783 | 138 | 82 | 2 | 29 | 158 | 30 | 167 | 4.77e-18 | 77.4 |
| MS.gene073334.t1 | MTR_3g005530 | 46.667 | 75 | 40 | 0 | 11 | 85 | 1 | 75 | 1.24e-17 | 77.4 |
| MS.gene073334.t1 | MTR_1g101970 | 35.220 | 159 | 94 | 5 | 11 | 165 | 1 | 154 | 1.62e-17 | 76.3 |
| MS.gene073334.t1 | MTR_4g084740 | 44.444 | 90 | 49 | 1 | 11 | 99 | 1 | 90 | 3.44e-17 | 77.8 |
| MS.gene073334.t1 | MTR_8g033270 | 49.275 | 69 | 35 | 0 | 11 | 79 | 1 | 69 | 4.05e-17 | 76.3 |
| MS.gene073334.t1 | MTR_1g053070 | 50.725 | 69 | 34 | 0 | 11 | 79 | 1 | 69 | 5.59e-17 | 75.9 |
| MS.gene073334.t1 | MTR_5g032150 | 49.275 | 69 | 35 | 0 | 11 | 79 | 1 | 69 | 1.16e-16 | 74.7 |
| MS.gene073334.t1 | MTR_8g087860 | 43.678 | 87 | 48 | 1 | 6 | 92 | 13 | 98 | 1.21e-16 | 75.1 |
| MS.gene073334.t1 | MTR_2g009890 | 46.479 | 71 | 38 | 0 | 11 | 81 | 1 | 71 | 4.15e-16 | 73.9 |
| MS.gene073334.t1 | MTR_5g066180 | 42.029 | 69 | 40 | 0 | 11 | 79 | 1 | 69 | 4.64e-16 | 73.2 |
| MS.gene073334.t1 | MTR_1g038300 | 33.129 | 163 | 96 | 5 | 11 | 169 | 1 | 154 | 4.80e-16 | 73.2 |
| MS.gene073334.t1 | MTR_2g017865 | 38.462 | 91 | 56 | 0 | 2 | 92 | 7 | 97 | 5.61e-16 | 73.6 |
| MS.gene073334.t1 | MTR_6g464720 | 33.537 | 164 | 91 | 6 | 11 | 165 | 1 | 155 | 5.64e-16 | 73.2 |
| MS.gene073334.t1 | MTR_5g021270 | 32.857 | 140 | 79 | 4 | 11 | 147 | 1 | 128 | 6.25e-16 | 72.8 |
| MS.gene073334.t1 | MTR_5g021270 | 32.857 | 140 | 79 | 4 | 11 | 147 | 1 | 128 | 6.28e-16 | 72.8 |
| MS.gene073334.t1 | MTR_4g109810 | 35.537 | 121 | 75 | 3 | 11 | 128 | 1 | 121 | 7.87e-16 | 72.8 |
| MS.gene073334.t1 | MTR_1g029670 | 44.615 | 65 | 36 | 0 | 11 | 75 | 1 | 65 | 8.45e-16 | 71.6 |
| MS.gene073334.t1 | MTR_5g066960 | 46.667 | 60 | 32 | 0 | 11 | 70 | 1 | 60 | 8.59e-16 | 68.2 |
| MS.gene073334.t1 | MTR_8g033220 | 34.667 | 150 | 87 | 4 | 11 | 157 | 1 | 142 | 8.75e-16 | 72.4 |
| MS.gene073334.t1 | MTR_8g033220 | 34.667 | 150 | 87 | 4 | 11 | 157 | 1 | 142 | 9.14e-16 | 72.4 |
| MS.gene073334.t1 | MTR_3g113030 | 40.678 | 118 | 54 | 4 | 11 | 127 | 1 | 103 | 9.96e-16 | 72.4 |
| MS.gene073334.t1 | MTR_3g102570 | 50.704 | 71 | 34 | 1 | 11 | 80 | 1 | 71 | 1.26e-15 | 73.2 |
| MS.gene073334.t1 | MTR_3g088615 | 43.662 | 71 | 38 | 1 | 11 | 79 | 1 | 71 | 1.65e-15 | 70.9 |
| MS.gene073334.t1 | MTR_7g075870 | 45.205 | 73 | 40 | 0 | 11 | 83 | 1 | 73 | 1.81e-15 | 71.2 |
| MS.gene073334.t1 | MTR_2g461710 | 54.545 | 55 | 25 | 0 | 11 | 65 | 1 | 55 | 2.28e-15 | 67.4 |
| MS.gene073334.t1 | MTR_4g102530 | 49.275 | 69 | 35 | 0 | 11 | 79 | 1 | 69 | 2.54e-15 | 70.9 |
| MS.gene073334.t1 | MTR_5g031000 | 43.478 | 69 | 39 | 0 | 11 | 79 | 1 | 69 | 4.20e-15 | 70.5 |
| MS.gene073334.t1 | MTR_4g109830 | 45.714 | 70 | 37 | 1 | 11 | 79 | 1 | 70 | 4.32e-15 | 70.5 |
| MS.gene073334.t1 | MTR_5g031000 | 43.478 | 69 | 39 | 0 | 11 | 79 | 1 | 69 | 4.57e-15 | 70.9 |
| MS.gene073334.t1 | MTR_7g075870 | 53.448 | 58 | 27 | 0 | 11 | 68 | 1 | 58 | 6.78e-15 | 69.7 |
| MS.gene073334.t1 | MTR_4g093030 | 35.135 | 111 | 52 | 2 | 11 | 121 | 1 | 91 | 6.91e-15 | 68.6 |
| MS.gene073334.t1 | MTR_6g015975 | 47.222 | 72 | 37 | 1 | 11 | 81 | 1 | 72 | 7.08e-15 | 70.5 |
| MS.gene073334.t1 | MTR_7g016600 | 52.632 | 57 | 27 | 0 | 11 | 67 | 1 | 57 | 7.51e-15 | 70.1 |
| MS.gene073334.t1 | MTR_8g066260 | 51.724 | 58 | 28 | 0 | 11 | 68 | 1 | 58 | 8.48e-15 | 70.1 |
| MS.gene073334.t1 | MTR_8g097090 | 43.210 | 81 | 28 | 2 | 11 | 73 | 1 | 81 | 1.04e-14 | 69.7 |
| MS.gene073334.t1 | MTR_5g046790 | 52.727 | 55 | 26 | 0 | 11 | 65 | 1 | 55 | 1.08e-14 | 69.3 |
| MS.gene073334.t1 | MTR_3g084980 | 54.386 | 57 | 26 | 0 | 11 | 67 | 1 | 57 | 1.10e-14 | 69.7 |
| MS.gene073334.t1 | MTR_5g046870 | 46.269 | 67 | 34 | 1 | 11 | 75 | 1 | 67 | 1.41e-14 | 66.6 |
| MS.gene073334.t1 | MTR_1g108500 | 56.863 | 51 | 22 | 0 | 28 | 78 | 113 | 163 | 1.71e-14 | 70.1 |
| MS.gene073334.t1 | MTR_7g016630 | 44.286 | 70 | 38 | 1 | 11 | 79 | 1 | 70 | 2.21e-14 | 68.9 |
| MS.gene073334.t1 | MTR_3g067910 | 47.368 | 57 | 30 | 0 | 24 | 80 | 2 | 58 | 2.51e-14 | 65.9 |
| MS.gene073334.t1 | MTR_7g075850 | 53.448 | 58 | 27 | 0 | 11 | 68 | 1 | 58 | 3.65e-14 | 68.6 |
| MS.gene073334.t1 | MTR_1g075570 | 33.607 | 122 | 68 | 3 | 21 | 139 | 1 | 112 | 5.57e-14 | 66.2 |
| MS.gene073334.t1 | MTR_5g041650 | 30.769 | 156 | 89 | 5 | 11 | 163 | 38 | 177 | 8.64e-14 | 68.6 |
| MS.gene073334.t1 | MTR_2g045020 | 32.584 | 178 | 109 | 5 | 4 | 173 | 7 | 181 | 1.16e-13 | 65.9 |
| MS.gene073334.t1 | MTR_4g036050 | 36.905 | 84 | 52 | 1 | 11 | 93 | 1 | 84 | 7.48e-13 | 63.9 |
| MS.gene073334.t1 | MTR_4g036050 | 36.905 | 84 | 52 | 1 | 11 | 93 | 1 | 84 | 8.05e-13 | 63.9 |
| MS.gene073334.t1 | MTR_4g036050 | 36.905 | 84 | 52 | 1 | 11 | 93 | 1 | 84 | 8.30e-13 | 63.5 |
| MS.gene073334.t1 | MTR_4g036050 | 36.905 | 84 | 52 | 1 | 11 | 93 | 1 | 84 | 8.38e-13 | 63.5 |
| MS.gene073334.t1 | MTR_4g108720 | 49.057 | 53 | 27 | 0 | 11 | 63 | 1 | 53 | 4.63e-12 | 63.5 |
| MS.gene073334.t1 | MTR_1g041615 | 35.577 | 104 | 48 | 3 | 25 | 127 | 19 | 104 | 1.93e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073334.t1 | AT5G60440 | 37.288 | 177 | 97 | 4 | 8 | 173 | 3 | 176 | 5.90e-33 | 119 |
| MS.gene073334.t1 | AT2G24840 | 37.423 | 163 | 84 | 3 | 10 | 159 | 61 | 218 | 1.60e-29 | 109 |
| MS.gene073334.t1 | AT1G65360 | 35.152 | 165 | 101 | 2 | 8 | 166 | 3 | 167 | 7.36e-29 | 106 |
| MS.gene073334.t1 | AT1G01530 | 38.788 | 165 | 93 | 4 | 8 | 165 | 3 | 166 | 8.54e-28 | 104 |
| MS.gene073334.t1 | AT4G36590 | 34.731 | 167 | 84 | 4 | 12 | 159 | 7 | 167 | 3.13e-24 | 95.1 |
| MS.gene073334.t1 | AT2G34440 | 37.931 | 145 | 79 | 5 | 11 | 147 | 1 | 142 | 2.98e-23 | 90.9 |
| MS.gene073334.t1 | AT4G09960 | 35.252 | 139 | 76 | 4 | 11 | 147 | 2 | 128 | 1.04e-20 | 85.5 |
| MS.gene073334.t1 | AT4G09960 | 35.252 | 139 | 76 | 4 | 11 | 147 | 1 | 127 | 1.20e-20 | 85.1 |
| MS.gene073334.t1 | AT4G09960 | 35.252 | 139 | 76 | 4 | 11 | 147 | 1 | 127 | 1.21e-20 | 85.5 |
| MS.gene073334.t1 | AT4G09960 | 34.247 | 146 | 82 | 4 | 3 | 146 | 19 | 152 | 1.24e-20 | 85.9 |
| MS.gene073334.t1 | AT4G09960 | 35.252 | 139 | 76 | 4 | 11 | 147 | 11 | 137 | 1.38e-20 | 85.5 |
| MS.gene073334.t1 | AT3G66656 | 59.016 | 61 | 25 | 0 | 11 | 71 | 1 | 61 | 1.61e-20 | 84.0 |
| MS.gene073334.t1 | AT5G10140 | 38.037 | 163 | 77 | 7 | 11 | 164 | 1 | 148 | 2.04e-20 | 83.6 |
| MS.gene073334.t1 | AT5G10140 | 38.365 | 159 | 74 | 7 | 11 | 160 | 1 | 144 | 2.72e-20 | 83.2 |
| MS.gene073334.t1 | AT1G72350 | 30.539 | 167 | 85 | 3 | 12 | 173 | 43 | 183 | 2.73e-20 | 84.3 |
| MS.gene073334.t1 | AT5G10140 | 38.365 | 159 | 74 | 7 | 11 | 160 | 1 | 144 | 3.96e-20 | 83.2 |
| MS.gene073334.t1 | AT5G10140 | 36.478 | 159 | 82 | 6 | 11 | 168 | 1 | 141 | 1.07e-19 | 82.0 |
| MS.gene073334.t1 | AT3G57230 | 38.095 | 126 | 67 | 3 | 11 | 125 | 1 | 126 | 1.24e-19 | 80.9 |
| MS.gene073334.t1 | AT2G42830 | 36.508 | 126 | 68 | 3 | 4 | 127 | 9 | 124 | 2.59e-19 | 82.4 |
| MS.gene073334.t1 | AT4G09960 | 35.507 | 138 | 75 | 4 | 11 | 146 | 96 | 221 | 2.98e-19 | 83.2 |
| MS.gene073334.t1 | AT2G42830 | 36.508 | 126 | 68 | 3 | 4 | 127 | 9 | 124 | 3.20e-19 | 82.0 |
| MS.gene073334.t1 | AT3G57230 | 38.095 | 126 | 67 | 3 | 11 | 125 | 1 | 126 | 1.15e-18 | 80.5 |
| MS.gene073334.t1 | AT3G57230 | 38.095 | 126 | 67 | 3 | 11 | 125 | 1 | 126 | 1.15e-18 | 80.5 |
| MS.gene073334.t1 | AT5G13790 | 48.235 | 85 | 42 | 1 | 11 | 95 | 1 | 83 | 1.64e-18 | 80.5 |
| MS.gene073334.t1 | AT5G23260 | 33.117 | 154 | 91 | 3 | 11 | 160 | 1 | 146 | 2.03e-18 | 79.7 |
| MS.gene073334.t1 | AT5G23260 | 49.351 | 77 | 37 | 1 | 6 | 80 | 12 | 88 | 2.06e-18 | 80.1 |
| MS.gene073334.t1 | AT5G23260 | 49.351 | 77 | 37 | 1 | 6 | 80 | 12 | 88 | 2.07e-18 | 80.1 |
| MS.gene073334.t1 | AT1G77950 | 50.704 | 71 | 34 | 1 | 11 | 80 | 1 | 71 | 3.49e-18 | 79.3 |
| MS.gene073334.t1 | AT1G77950 | 50.704 | 71 | 34 | 1 | 11 | 80 | 1 | 71 | 3.49e-18 | 79.3 |
| MS.gene073334.t1 | AT1G77950 | 50.704 | 71 | 34 | 1 | 11 | 80 | 1 | 71 | 3.49e-18 | 79.3 |
| MS.gene073334.t1 | AT1G77950 | 50.704 | 71 | 34 | 1 | 11 | 80 | 1 | 71 | 3.49e-18 | 79.3 |
| MS.gene073334.t1 | AT5G65050 | 36.620 | 142 | 72 | 5 | 11 | 148 | 1 | 128 | 3.68e-18 | 77.8 |
| MS.gene073334.t1 | AT1G77980 | 43.158 | 95 | 48 | 2 | 11 | 104 | 1 | 90 | 3.96e-18 | 80.1 |
| MS.gene073334.t1 | AT3G54340 | 36.522 | 115 | 59 | 1 | 11 | 125 | 1 | 101 | 6.63e-18 | 78.2 |
| MS.gene073334.t1 | AT2G22540 | 33.133 | 166 | 96 | 4 | 11 | 164 | 1 | 163 | 6.65e-18 | 78.6 |
| MS.gene073334.t1 | AT2G22540 | 33.133 | 166 | 96 | 4 | 11 | 164 | 1 | 163 | 6.65e-18 | 78.6 |
| MS.gene073334.t1 | AT2G45660 | 34.058 | 138 | 79 | 4 | 11 | 147 | 1 | 127 | 6.72e-18 | 76.6 |
| MS.gene073334.t1 | AT3G58780 | 36.441 | 118 | 63 | 3 | 9 | 124 | 20 | 127 | 7.65e-18 | 78.6 |
| MS.gene073334.t1 | AT3G58780 | 36.441 | 118 | 63 | 3 | 9 | 124 | 14 | 121 | 7.68e-18 | 78.2 |
| MS.gene073334.t1 | AT5G13790 | 53.623 | 69 | 32 | 0 | 11 | 79 | 1 | 69 | 7.80e-18 | 78.6 |
| MS.gene073334.t1 | AT3G58780 | 36.441 | 118 | 63 | 3 | 9 | 124 | 14 | 121 | 1.06e-17 | 78.6 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.08e-17 | 74.7 |
| MS.gene073334.t1 | AT5G65050 | 36.620 | 142 | 72 | 5 | 11 | 148 | 1 | 128 | 1.28e-17 | 76.3 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.31e-17 | 75.9 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.31e-17 | 75.9 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.31e-17 | 75.9 |
| MS.gene073334.t1 | AT5G51870 | 48.101 | 79 | 41 | 0 | 8 | 86 | 21 | 99 | 1.51e-17 | 76.6 |
| MS.gene073334.t1 | AT5G23260 | 51.389 | 72 | 33 | 1 | 11 | 80 | 1 | 72 | 1.56e-17 | 77.4 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.68e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.68e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.68e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.68e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 1.68e-17 | 75.5 |
| MS.gene073334.t1 | AT5G65050 | 36.620 | 142 | 72 | 5 | 11 | 148 | 1 | 128 | 1.71e-17 | 76.3 |
| MS.gene073334.t1 | AT1G22130 | 43.158 | 95 | 48 | 2 | 11 | 104 | 1 | 90 | 2.27e-17 | 78.2 |
| MS.gene073334.t1 | AT4G37940 | 45.333 | 75 | 41 | 0 | 11 | 85 | 1 | 75 | 2.91e-17 | 76.3 |
| MS.gene073334.t1 | AT4G24540 | 50.725 | 69 | 34 | 0 | 11 | 79 | 1 | 69 | 3.36e-17 | 76.3 |
| MS.gene073334.t1 | AT4G37940 | 45.333 | 75 | 41 | 0 | 11 | 85 | 1 | 75 | 3.46e-17 | 76.3 |
| MS.gene073334.t1 | AT4G22950 | 33.544 | 158 | 91 | 5 | 11 | 161 | 1 | 151 | 3.58e-17 | 75.1 |
| MS.gene073334.t1 | AT5G51860 | 47.368 | 76 | 40 | 0 | 11 | 86 | 1 | 76 | 3.91e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 4.22e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 4.22e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 4.38e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 4.38e-17 | 75.5 |
| MS.gene073334.t1 | AT5G62165 | 46.835 | 79 | 42 | 0 | 11 | 89 | 1 | 79 | 4.38e-17 | 75.5 |
| MS.gene073334.t1 | AT4G18960 | 35.000 | 140 | 73 | 5 | 12 | 147 | 18 | 143 | 4.58e-17 | 76.3 |
| MS.gene073334.t1 | AT5G51870 | 48.684 | 76 | 39 | 0 | 11 | 86 | 1 | 76 | 4.61e-17 | 74.7 |
| MS.gene073334.t1 | AT5G51860 | 47.368 | 76 | 40 | 0 | 11 | 86 | 1 | 76 | 5.92e-17 | 75.5 |
| MS.gene073334.t1 | AT4G37940 | 45.333 | 75 | 41 | 0 | 11 | 85 | 1 | 75 | 6.67e-17 | 74.3 |
| MS.gene073334.t1 | AT5G51870 | 48.684 | 76 | 39 | 0 | 11 | 86 | 1 | 76 | 6.86e-17 | 75.1 |
| MS.gene073334.t1 | AT2G45660 | 34.058 | 138 | 79 | 4 | 11 | 147 | 1 | 127 | 7.60e-17 | 75.1 |
| MS.gene073334.t1 | AT3G57390 | 44.186 | 86 | 48 | 0 | 11 | 96 | 1 | 86 | 9.04e-17 | 75.1 |
| MS.gene073334.t1 | AT4G22950 | 33.544 | 158 | 91 | 5 | 11 | 161 | 1 | 151 | 9.18e-17 | 75.1 |
| MS.gene073334.t1 | AT4G22950 | 33.544 | 158 | 91 | 5 | 11 | 161 | 1 | 151 | 9.18e-17 | 75.1 |
| MS.gene073334.t1 | AT5G65060 | 34.507 | 142 | 75 | 5 | 11 | 148 | 1 | 128 | 1.04e-16 | 74.3 |
| MS.gene073334.t1 | AT2G22540 | 33.133 | 166 | 91 | 5 | 11 | 164 | 1 | 158 | 1.20e-16 | 75.1 |
| MS.gene073334.t1 | AT5G20240 | 39.831 | 118 | 66 | 4 | 11 | 125 | 1 | 116 | 1.34e-16 | 72.8 |
| MS.gene073334.t1 | AT2G45650 | 49.275 | 69 | 35 | 0 | 11 | 79 | 1 | 69 | 1.39e-16 | 75.1 |
| MS.gene073334.t1 | AT5G51870 | 48.052 | 77 | 40 | 0 | 10 | 86 | 10 | 86 | 1.46e-16 | 74.7 |
| MS.gene073334.t1 | AT5G51870 | 48.684 | 76 | 39 | 0 | 11 | 86 | 1 | 76 | 1.50e-16 | 74.3 |
| MS.gene073334.t1 | AT3G58780 | 37.288 | 118 | 55 | 4 | 9 | 124 | 14 | 114 | 1.77e-16 | 74.7 |
| MS.gene073334.t1 | AT5G20240 | 38.983 | 118 | 67 | 4 | 11 | 125 | 1 | 116 | 2.09e-16 | 73.9 |
| MS.gene073334.t1 | AT3G57390 | 44.186 | 86 | 48 | 0 | 11 | 96 | 1 | 86 | 2.31e-16 | 74.3 |
| MS.gene073334.t1 | AT3G61120 | 45.070 | 71 | 39 | 0 | 11 | 81 | 1 | 71 | 2.36e-16 | 74.3 |
| MS.gene073334.t1 | AT3G04100 | 31.361 | 169 | 105 | 5 | 8 | 165 | 10 | 178 | 2.40e-16 | 73.6 |
| MS.gene073334.t1 | AT2G22630 | 46.377 | 69 | 37 | 0 | 11 | 79 | 1 | 69 | 2.50e-16 | 73.9 |
| MS.gene073334.t1 | AT2G22630 | 46.377 | 69 | 37 | 0 | 11 | 79 | 1 | 69 | 2.50e-16 | 73.9 |
| MS.gene073334.t1 | AT5G65060 | 32.692 | 156 | 80 | 5 | 11 | 160 | 1 | 137 | 2.59e-16 | 73.2 |
| MS.gene073334.t1 | AT1G28460 | 31.977 | 172 | 93 | 5 | 8 | 162 | 4 | 168 | 2.81e-16 | 72.8 |
| MS.gene073334.t1 | AT5G65070 | 44.286 | 70 | 38 | 1 | 11 | 79 | 1 | 70 | 6.01e-16 | 71.2 |
| MS.gene073334.t1 | AT5G65050 | 43.333 | 90 | 49 | 2 | 11 | 98 | 1 | 90 | 6.68e-16 | 72.0 |
| MS.gene073334.t1 | AT4G11880 | 51.613 | 62 | 30 | 0 | 11 | 72 | 1 | 62 | 9.74e-16 | 71.2 |
| MS.gene073334.t1 | AT4G11880 | 51.613 | 62 | 30 | 0 | 11 | 72 | 1 | 62 | 9.74e-16 | 71.2 |
| MS.gene073334.t1 | AT3G30260 | 54.545 | 55 | 25 | 0 | 11 | 65 | 1 | 55 | 1.25e-15 | 72.4 |
| MS.gene073334.t1 | AT5G65070 | 44.286 | 70 | 38 | 1 | 11 | 79 | 1 | 70 | 1.28e-15 | 71.6 |
| MS.gene073334.t1 | AT1G47760 | 46.970 | 66 | 35 | 0 | 11 | 76 | 1 | 66 | 1.34e-15 | 71.2 |
| MS.gene073334.t1 | AT5G65060 | 34.821 | 112 | 68 | 3 | 11 | 117 | 1 | 112 | 1.70e-15 | 70.9 |
| MS.gene073334.t1 | AT2G03710 | 41.053 | 95 | 52 | 2 | 11 | 101 | 1 | 95 | 1.80e-15 | 70.9 |
| MS.gene073334.t1 | AT4G11880 | 55.172 | 58 | 26 | 0 | 11 | 68 | 1 | 58 | 2.44e-15 | 71.2 |
| MS.gene073334.t1 | AT4G11880 | 55.172 | 58 | 26 | 0 | 11 | 68 | 1 | 58 | 2.44e-15 | 71.2 |
| MS.gene073334.t1 | AT1G71692 | 42.169 | 83 | 47 | 1 | 11 | 92 | 1 | 83 | 3.54e-15 | 70.5 |
| MS.gene073334.t1 | AT5G65070 | 44.286 | 70 | 38 | 1 | 11 | 79 | 1 | 70 | 3.56e-15 | 70.9 |
| MS.gene073334.t1 | AT5G65070 | 44.286 | 70 | 38 | 1 | 11 | 79 | 1 | 70 | 4.33e-15 | 70.5 |
| MS.gene073334.t1 | AT2G03710 | 41.053 | 95 | 52 | 2 | 11 | 101 | 1 | 95 | 5.15e-15 | 70.9 |
| MS.gene073334.t1 | AT2G03710 | 41.053 | 95 | 52 | 2 | 11 | 101 | 1 | 95 | 5.31e-15 | 70.9 |
| MS.gene073334.t1 | AT3G58780 | 50.000 | 60 | 30 | 0 | 9 | 68 | 14 | 73 | 5.90e-15 | 70.9 |
| MS.gene073334.t1 | AT5G65080 | 31.410 | 156 | 94 | 4 | 11 | 166 | 8 | 150 | 5.98e-15 | 69.7 |
| MS.gene073334.t1 | AT5G15800 | 38.318 | 107 | 59 | 3 | 11 | 110 | 1 | 107 | 6.85e-15 | 70.5 |
| MS.gene073334.t1 | AT1G29962 | 30.286 | 175 | 95 | 5 | 8 | 162 | 4 | 171 | 8.50e-15 | 68.9 |
| MS.gene073334.t1 | AT1G69120 | 50.000 | 58 | 29 | 0 | 11 | 68 | 1 | 58 | 8.99e-15 | 69.7 |
| MS.gene073334.t1 | AT1G26310 | 51.724 | 58 | 28 | 0 | 11 | 68 | 1 | 58 | 9.75e-15 | 70.1 |
| MS.gene073334.t1 | AT5G60910 | 54.545 | 55 | 25 | 0 | 11 | 65 | 1 | 55 | 1.01e-14 | 69.7 |
| MS.gene073334.t1 | AT2G14210 | 36.275 | 102 | 44 | 2 | 11 | 112 | 1 | 81 | 1.08e-14 | 69.7 |
| MS.gene073334.t1 | AT5G65070 | 47.541 | 61 | 32 | 0 | 11 | 71 | 1 | 61 | 1.15e-14 | 69.7 |
| MS.gene073334.t1 | AT4G37435 | 52.632 | 57 | 27 | 0 | 11 | 67 | 1 | 57 | 1.21e-14 | 68.6 |
| MS.gene073334.t1 | AT3G02310 | 38.318 | 107 | 59 | 3 | 11 | 110 | 1 | 107 | 1.25e-14 | 68.9 |
| MS.gene073334.t1 | AT1G24260 | 52.632 | 57 | 27 | 0 | 11 | 67 | 1 | 57 | 1.34e-14 | 69.7 |
| MS.gene073334.t1 | AT1G24260 | 52.632 | 57 | 27 | 0 | 11 | 67 | 1 | 57 | 1.36e-14 | 69.7 |
| MS.gene073334.t1 | AT5G15800 | 38.318 | 107 | 59 | 3 | 11 | 110 | 1 | 107 | 1.38e-14 | 69.7 |
| MS.gene073334.t1 | AT1G24260 | 52.632 | 57 | 27 | 0 | 11 | 67 | 1 | 57 | 1.47e-14 | 69.3 |
| MS.gene073334.t1 | AT2G14210 | 36.275 | 102 | 44 | 2 | 11 | 112 | 1 | 81 | 1.52e-14 | 69.3 |
| MS.gene073334.t1 | AT1G69120 | 52.727 | 55 | 26 | 0 | 11 | 65 | 1 | 55 | 2.34e-14 | 68.9 |
| MS.gene073334.t1 | AT5G65080 | 32.704 | 159 | 87 | 5 | 11 | 166 | 8 | 149 | 4.83e-14 | 67.4 |
| MS.gene073334.t1 | AT3G02310 | 52.632 | 57 | 27 | 0 | 11 | 67 | 1 | 57 | 4.89e-14 | 68.2 |
| MS.gene073334.t1 | AT1G28450 | 28.313 | 166 | 106 | 3 | 8 | 160 | 4 | 169 | 3.12e-13 | 64.7 |
| MS.gene073334.t1 | AT1G18750 | 31.081 | 148 | 89 | 4 | 11 | 158 | 1 | 135 | 4.98e-13 | 66.2 |
| MS.gene073334.t1 | AT1G18750 | 31.081 | 148 | 89 | 4 | 11 | 158 | 1 | 135 | 5.13e-13 | 66.2 |
| MS.gene073334.t1 | AT2G26320 | 45.902 | 61 | 33 | 0 | 8 | 68 | 14 | 74 | 2.21e-12 | 60.8 |
| MS.gene073334.t1 | AT1G69540 | 33.721 | 86 | 56 | 1 | 11 | 95 | 1 | 86 | 2.37e-12 | 64.3 |
| MS.gene073334.t1 | AT1G31140 | 40.476 | 84 | 49 | 1 | 11 | 94 | 1 | 83 | 2.49e-12 | 63.2 |
| MS.gene073334.t1 | AT1G31140 | 40.476 | 84 | 49 | 1 | 11 | 94 | 1 | 83 | 2.63e-12 | 62.8 |
| MS.gene073334.t1 | AT2G03060 | 45.763 | 59 | 31 | 1 | 11 | 68 | 1 | 59 | 3.41e-12 | 63.9 |
| MS.gene073334.t1 | AT2G03060 | 45.763 | 59 | 31 | 1 | 11 | 68 | 1 | 59 | 3.41e-12 | 63.9 |
| MS.gene073334.t1 | AT2G03060 | 45.763 | 59 | 31 | 1 | 11 | 68 | 1 | 59 | 3.41e-12 | 63.9 |
| MS.gene073334.t1 | AT2G03060 | 45.763 | 59 | 31 | 1 | 11 | 68 | 1 | 59 | 4.17e-12 | 63.5 |
| MS.gene073334.t1 | AT1G69540 | 33.721 | 86 | 56 | 1 | 11 | 95 | 1 | 86 | 4.39e-12 | 63.5 |
| MS.gene073334.t1 | AT5G49490 | 34.884 | 86 | 52 | 1 | 1 | 82 | 34 | 119 | 6.48e-12 | 62.8 |
| MS.gene073334.t1 | AT1G18750 | 43.860 | 57 | 32 | 0 | 11 | 67 | 1 | 57 | 7.87e-12 | 62.8 |
| MS.gene073334.t1 | AT1G77080 | 38.095 | 105 | 63 | 2 | 11 | 113 | 1 | 105 | 8.36e-12 | 60.8 |
| MS.gene073334.t1 | AT1G77080 | 38.095 | 105 | 63 | 2 | 11 | 113 | 1 | 105 | 8.53e-12 | 60.8 |
| MS.gene073334.t1 | AT1G77080 | 38.095 | 105 | 63 | 2 | 11 | 113 | 1 | 105 | 1.47e-11 | 60.5 |
| MS.gene073334.t1 | AT1G77080 | 36.893 | 103 | 63 | 2 | 11 | 111 | 1 | 103 | 6.06e-11 | 59.3 |
| MS.gene073334.t1 | AT1G77080 | 62.500 | 40 | 15 | 0 | 11 | 50 | 1 | 40 | 9.77e-11 | 57.4 |
Find 33 sgRNAs with CRISPR-Local
Find 33 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAGAAGATGTTCAAAATT+TGG | 0.191288 | 8.1:+5890123 | MS.gene073334:CDS |
| CTTCCTCCTTAACTCATAAA+TGG | 0.253752 | 8.1:-5890218 | None:intergenic |
| GTCCCATGTTCTTCTTTCTT+TGG | 0.262352 | 8.1:-5889784 | None:intergenic |
| CTAACATTTCACCATGGATA+TGG | 0.287475 | 8.1:+5889757 | None:intergenic |
| CATATTGTCTATTGTAATCT+TGG | 0.314684 | 8.1:-5890063 | None:intergenic |
| TGATATCCATTTATGAGTTA+AGG | 0.354781 | 8.1:+5890212 | MS.gene073334:CDS |
| CAAAGGAACCACTGAGTTTG+AGG | 0.435112 | 8.1:+5890009 | MS.gene073334:CDS |
| TTCCTTTGATGTAGCTATTG+AGG | 0.439823 | 8.1:-5889994 | None:intergenic |
| TGGCTAAGGGTGGTGATTGG+TGG | 0.478295 | 8.1:+5890143 | MS.gene073334:CDS |
| AAGGAGGAAGCTTGTTGAAA+GGG | 0.480405 | 8.1:+5890231 | MS.gene073334:CDS |
| TTGAGGACAGAGTTTGTGTC+GGG | 0.481655 | 8.1:-5889977 | None:intergenic |
| AGATGTTCAAAATTTGGCTA+AGG | 0.492534 | 8.1:+5890129 | MS.gene073334:CDS |
| CACTGAGTTTGAGGATTCAA+AGG | 0.500912 | 8.1:+5890018 | MS.gene073334:CDS |
| TTGTCTATTGTAATCTTGGT+AGG | 0.503116 | 8.1:-5890059 | None:intergenic |
| ATTTGGCTAAGGGTGGTGAT+TGG | 0.510604 | 8.1:+5890140 | MS.gene073334:CDS |
| AGATTACAATAGACAATATG+AGG | 0.512684 | 8.1:+5890066 | MS.gene073334:CDS |
| GATGTTCAAAATTTGGCTAA+GGG | 0.514220 | 8.1:+5890130 | MS.gene073334:CDS |
| TGAGGAGGCACAAAAGATGT+TGG | 0.534132 | 8.1:+5890084 | MS.gene073334:CDS |
| TCTTTGGTTAACCATATCCA+TGG | 0.535708 | 8.1:-5889768 | None:intergenic |
| TAAGGAGGAAGCTTGTTGAA+AGG | 0.551823 | 8.1:+5890230 | MS.gene073334:CDS |
| ACCAGGAGAAAACACAATGA+TGG | 0.578333 | 8.1:-5889930 | None:intergenic |
| GGCACAAAAGATGTTGGAGA+TGG | 0.578550 | 8.1:+5890090 | MS.gene073334:CDS |
| ATTGAGGACAGAGTTTGTGT+CGG | 0.591392 | 8.1:-5889978 | None:intergenic |
| TATCCATTTATGAGTTAAGG+AGG | 0.599134 | 8.1:+5890215 | MS.gene073334:CDS |
| CAAGAAGATTGAGATCAAGA+AGG | 0.609869 | 8.1:+5889808 | MS.gene073334:CDS |
| GTCCTCAATAGCTACATCAA+AGG | 0.616699 | 8.1:+5889992 | MS.gene073334:CDS |
| AATAATTCTATTCTACGGCA+TGG | 0.619339 | 8.1:-5890281 | None:intergenic |
| GTTCAAAATTTGGCTAAGGG+TGG | 0.631185 | 8.1:+5890133 | MS.gene073334:CDS |
| AACCAAAGAAAGAAGAACAT+GGG | 0.647859 | 8.1:+5889782 | MS.gene073334:CDS |
| TAACCAAAGAAAGAAGAACA+TGG | 0.648089 | 8.1:+5889781 | MS.gene073334:CDS |
| CTTTGAATCCTCAAACTCAG+TGG | 0.661108 | 8.1:-5890017 | None:intergenic |
| AAACAAAATAGTTTGTCACC+AGG | 0.670457 | 8.1:-5889947 | None:intergenic |
| TTACAATAGACAATATGAGG+AGG | 0.701585 | 8.1:+5890069 | MS.gene073334:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACTAGAAGATGTTCAAAATT+TGG | + | chr8.1:5890123-5890142 | MS.gene073334:CDS | 25.0% |
| ! | AGATTACAATAGACAATATG+AGG | + | chr8.1:5890066-5890085 | MS.gene073334:CDS | 25.0% |
| ! | CATATTGTCTATTGTAATCT+TGG | - | chr8.1:5890066-5890085 | None:intergenic | 25.0% |
| ! | TGATATCCATTTATGAGTTA+AGG | + | chr8.1:5890212-5890231 | MS.gene073334:CDS | 25.0% |
| !!! | ACTTTTTCAAAAAGAAGACA+AGG | + | chr8.1:5889857-5889876 | MS.gene073334:CDS | 25.0% |
| AACCAAAGAAAGAAGAACAT+GGG | + | chr8.1:5889782-5889801 | MS.gene073334:CDS | 30.0% | |
| AGATGTTCAAAATTTGGCTA+AGG | + | chr8.1:5890129-5890148 | MS.gene073334:CDS | 30.0% | |
| GATGTTCAAAATTTGGCTAA+GGG | + | chr8.1:5890130-5890149 | MS.gene073334:CDS | 30.0% | |
| TAACCAAAGAAAGAAGAACA+TGG | + | chr8.1:5889781-5889800 | MS.gene073334:CDS | 30.0% | |
| TATCCATTTATGAGTTAAGG+AGG | + | chr8.1:5890215-5890234 | MS.gene073334:CDS | 30.0% | |
| TTACAATAGACAATATGAGG+AGG | + | chr8.1:5890069-5890088 | MS.gene073334:CDS | 30.0% | |
| TTGTCTATTGTAATCTTGGT+AGG | - | chr8.1:5890062-5890081 | None:intergenic | 30.0% | |
| ! | AAACAAAATAGTTTGTCACC+AGG | - | chr8.1:5889950-5889969 | None:intergenic | 30.0% |
| !! | GGTGACAAACTATTTTGTTT+TGG | + | chr8.1:5889950-5889969 | MS.gene073334:CDS | 30.0% |
| CAAGAAGATTGAGATCAAGA+AGG | + | chr8.1:5889808-5889827 | MS.gene073334:CDS | 35.0% | |
| CTTCCTCCTTAACTCATAAA+TGG | - | chr8.1:5890221-5890240 | None:intergenic | 35.0% | |
| TTCCTTTGATGTAGCTATTG+AGG | - | chr8.1:5889997-5890016 | None:intergenic | 35.0% | |
| ACCAGGAGAAAACACAATGA+TGG | - | chr8.1:5889933-5889952 | None:intergenic | 40.0% | |
| ATTGAGGACAGAGTTTGTGT+CGG | - | chr8.1:5889981-5890000 | None:intergenic | 40.0% | |
| CACTGAGTTTGAGGATTCAA+AGG | + | chr8.1:5890018-5890037 | MS.gene073334:CDS | 40.0% | |
| CTTTGAATCCTCAAACTCAG+TGG | - | chr8.1:5890020-5890039 | None:intergenic | 40.0% | |
| GTCCCATGTTCTTCTTTCTT+TGG | - | chr8.1:5889787-5889806 | None:intergenic | 40.0% | |
| GTCCTCAATAGCTACATCAA+AGG | + | chr8.1:5889992-5890011 | MS.gene073334:CDS | 40.0% | |
| GTTCAAAATTTGGCTAAGGG+TGG | + | chr8.1:5890133-5890152 | MS.gene073334:CDS | 40.0% | |
| !! | AAGGAGGAAGCTTGTTGAAA+GGG | + | chr8.1:5890231-5890250 | MS.gene073334:CDS | 40.0% |
| !! | TAAGGAGGAAGCTTGTTGAA+AGG | + | chr8.1:5890230-5890249 | MS.gene073334:CDS | 40.0% |
| ATTTGGCTAAGGGTGGTGAT+TGG | + | chr8.1:5890140-5890159 | MS.gene073334:CDS | 45.0% | |
| CAAAGGAACCACTGAGTTTG+AGG | + | chr8.1:5890009-5890028 | MS.gene073334:CDS | 45.0% | |
| GGCACAAAAGATGTTGGAGA+TGG | + | chr8.1:5890090-5890109 | MS.gene073334:CDS | 45.0% | |
| TTGAGGACAGAGTTTGTGTC+GGG | - | chr8.1:5889980-5889999 | None:intergenic | 45.0% | |
| ! | GCCATCATTGTGTTTTCTCC+TGG | + | chr8.1:5889929-5889948 | MS.gene073334:CDS | 45.0% |
| ! | TGAGGAGGCACAAAAGATGT+TGG | + | chr8.1:5890084-5890103 | MS.gene073334:CDS | 45.0% |
| TGGCTAAGGGTGGTGATTGG+TGG | + | chr8.1:5890143-5890162 | MS.gene073334:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 5889770 | 5890291 | 5889770 | ID=MS.gene073334 |
| chr8.1 | mRNA | 5889770 | 5890291 | 5889770 | ID=MS.gene073334.t1;Parent=MS.gene073334 |
| chr8.1 | exon | 5889770 | 5890291 | 5889770 | ID=MS.gene073334.t1.exon1;Parent=MS.gene073334.t1 |
| chr8.1 | CDS | 5889770 | 5890291 | 5889770 | ID=cds.MS.gene073334.t1;Parent=MS.gene073334.t1 |
| Gene Sequence |
| Protein sequence |
