Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08485.t1 | RHN39605.1 | 96.4 | 394 | 12 | 1 | 1 | 392 | 15 | 408 | 6.70E-222 | 779.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08485.t1 | Q9FMK9 | 63.9 | 374 | 126 | 4 | 10 | 379 | 14 | 382 | 5.1e-138 | 492.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08485.t1 | A0A396GLR9 | 96.4 | 394 | 12 | 1 | 1 | 392 | 15 | 408 | 4.8e-222 | 779.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene08485 | 0.823302 | 1.49E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene08485 | 0.806568 | 7.72E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene08485 | 0.806488 | 8.03E-50 | -1.69E-46 |
| MS.gene05016 | MS.gene08485 | 0.819733 | 9.95E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene08485 | 0.823875 | 1.09E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene08485 | 0.813377 | 2.64E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene08485 | 0.818793 | 1.63E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene08485 | 0.825083 | 5.69E-54 | -1.69E-46 |
| MS.gene050680 | MS.gene08485 | 0.816105 | 6.56E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene08485 | 0.818524 | 1.87E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene08485 | 0.806654 | 7.41E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene08485 | 0.813182 | 2.91E-51 | -1.69E-46 |
| MS.gene050987 | MS.gene08485 | 0.904081 | 1.78E-79 | -1.69E-46 |
| MS.gene052176 | MS.gene08485 | 0.825759 | 3.93E-54 | -1.69E-46 |
| MS.gene052333 | MS.gene08485 | 0.804791 | 1.82E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene08485 | 0.836105 | 1.14E-56 | -1.69E-46 |
| MS.gene053188 | MS.gene08485 | 0.814929 | 1.20E-51 | -1.69E-46 |
| MS.gene053555 | MS.gene08485 | 0.81994 | 8.92E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene08485 | 0.807634 | 4.59E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene08485 | 0.801739 | 7.81E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene08485 | 0.808259 | 3.38E-50 | -1.69E-46 |
| MS.gene054537 | MS.gene08485 | 0.815321 | 9.82E-52 | -1.69E-46 |
| MS.gene054559 | MS.gene08485 | 0.841383 | 4.91E-58 | -1.69E-46 |
| MS.gene054657 | MS.gene08485 | 0.804209 | 2.41E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene08485 | 0.819529 | 1.11E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene08485 | 0.813126 | 3.00E-51 | -1.69E-46 |
| MS.gene055230 | MS.gene08485 | 0.812575 | 3.96E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene08485 | 0.813937 | 1.99E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene08485 | 0.830626 | 2.64E-55 | -1.69E-46 |
| MS.gene057060 | MS.gene08485 | 0.826184 | 3.12E-54 | -1.69E-46 |
| MS.gene057469 | MS.gene08485 | 0.803625 | 3.19E-49 | -1.69E-46 |
| MS.gene057555 | MS.gene08485 | 0.801231 | 9.93E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene08485 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene057869 | MS.gene08485 | 0.81194 | 5.44E-51 | -1.69E-46 |
| MS.gene059128 | MS.gene08485 | 0.839327 | 1.69E-57 | -1.69E-46 |
| MS.gene059161 | MS.gene08485 | 0.825566 | 4.37E-54 | -1.69E-46 |
| MS.gene059569 | MS.gene08485 | 0.80963 | 1.72E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene08485 | 0.805555 | 1.26E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene08485 | 0.810156 | 1.33E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08485.t1 | MTR_8g023770 | 94.924 | 394 | 18 | 2 | 1 | 392 | 15 | 408 | 0.0 | 772 |
| MS.gene08485.t1 | MTR_8g023780 | 94.859 | 389 | 18 | 1 | 1 | 387 | 15 | 403 | 0.0 | 764 |
| MS.gene08485.t1 | MTR_8g023780 | 95.550 | 382 | 15 | 1 | 1 | 380 | 15 | 396 | 0.0 | 759 |
| MS.gene08485.t1 | MTR_8g023780 | 94.924 | 394 | 18 | 1 | 1 | 392 | 15 | 408 | 0.0 | 755 |
| MS.gene08485.t1 | MTR_2g038080 | 49.030 | 361 | 159 | 6 | 33 | 376 | 57 | 409 | 2.09e-104 | 314 |
| MS.gene08485.t1 | MTR_2g038080 | 47.826 | 345 | 155 | 6 | 49 | 376 | 1 | 337 | 5.58e-96 | 290 |
| MS.gene08485.t1 | MTR_2g038080 | 46.619 | 281 | 126 | 5 | 113 | 376 | 4 | 277 | 7.10e-72 | 226 |
| MS.gene08485.t1 | MTR_2g038080 | 51.232 | 203 | 87 | 2 | 33 | 224 | 57 | 258 | 1.20e-61 | 199 |
| MS.gene08485.t1 | MTR_1g009460 | 90.667 | 75 | 6 | 1 | 1 | 74 | 1 | 75 | 6.46e-43 | 144 |
| MS.gene08485.t1 | MTR_1g051760 | 26.371 | 383 | 197 | 16 | 23 | 364 | 42 | 380 | 4.65e-19 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08485.t1 | AT5G63140 | 63.904 | 374 | 126 | 4 | 10 | 379 | 14 | 382 | 6.95e-178 | 500 |
| MS.gene08485.t1 | AT2G46880 | 55.291 | 378 | 158 | 6 | 9 | 380 | 13 | 385 | 1.10e-135 | 394 |
| MS.gene08485.t1 | AT2G46880 | 54.375 | 320 | 135 | 6 | 9 | 322 | 13 | 327 | 5.49e-116 | 341 |
| MS.gene08485.t1 | AT5G57140 | 45.856 | 362 | 174 | 5 | 27 | 379 | 44 | 392 | 4.54e-108 | 323 |
Find 107 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTAGAGAGTGACCCTTCT+TGG | 0.201194 | 8.2:+72189681 | None:intergenic |
| GGGTCTGAATTTCATGATTT+TGG | 0.221091 | 8.2:-72190744 | MS.gene08485:CDS |
| GTACACATCATTGATGGTTT+TGG | 0.254083 | 8.2:-72189596 | MS.gene08485:CDS |
| AAACATGACAGGTGTGAAAA+TGG | 0.280769 | 8.2:-72188798 | MS.gene08485:CDS |
| CCATCAATGATGTGTACTTC+TGG | 0.298827 | 8.2:+72189602 | None:intergenic |
| CTCGATGATCAGCATCTTAC+TGG | 0.303035 | 8.2:-72188491 | MS.gene08485:CDS |
| CTGCAGAAAGCATACATAAA+AGG | 0.319147 | 8.2:-72188902 | MS.gene08485:intron |
| CGTCGATTCCTGGTTATGAT+TGG | 0.323971 | 8.2:-72189472 | MS.gene08485:CDS |
| GGAATGTTTGATTCAATTGC+AGG | 0.325974 | 8.2:+72189731 | None:intergenic |
| ATACTACTGCTTTCATTCAT+AGG | 0.331639 | 8.2:-72190526 | MS.gene08485:CDS |
| CTTTGTTATGCTGGAGGGTT+CGG | 0.337763 | 8.2:-72188632 | MS.gene08485:CDS |
| AATCTATACTTTCTTGATAG+TGG | 0.342791 | 8.2:-72189512 | MS.gene08485:CDS |
| TCCAAAGTTCCGTCGATTCC+TGG | 0.347484 | 8.2:-72189482 | MS.gene08485:CDS |
| TGGTTATGGTGTCATGGTTT+TGG | 0.349609 | 8.2:-72190721 | MS.gene08485:CDS |
| TGATTTCTGCGGCAAGCTAA+TGG | 0.359873 | 8.2:-72188663 | MS.gene08485:CDS |
| CCAGAAGTACACATCATTGA+TGG | 0.364298 | 8.2:-72189602 | MS.gene08485:CDS |
| ATACTTTCACATCCCCTTGC+CGG | 0.377380 | 8.2:-72188843 | MS.gene08485:CDS |
| CAATTGAATCAAACATTCCT+TGG | 0.391653 | 8.2:-72189727 | MS.gene08485:CDS |
| AGCGAACGTCTGCGAAGCTT+CGG | 0.392502 | 8.2:-72189421 | MS.gene08485:CDS |
| TTGGAGATTGGTGGTGTTCA+AGG | 0.399124 | 8.2:-72189563 | MS.gene08485:CDS |
| GGTTTCTTCACAACCTTGGT+TGG | 0.400736 | 8.2:-72188731 | MS.gene08485:CDS |
| TGGCTATGATTCCTCGGATT+CGG | 0.402300 | 8.2:-72189780 | MS.gene08485:CDS |
| GGGAACAATAACTTGGAGAT+TGG | 0.405429 | 8.2:-72189575 | MS.gene08485:CDS |
| CTCTGGTTTCTTCACAACCT+TGG | 0.405994 | 8.2:-72188735 | MS.gene08485:CDS |
| GGGTTCGGATACCATGCTTA+TGG | 0.406948 | 8.2:-72188617 | MS.gene08485:CDS |
| GCAGCTTCTTTCTGAGGTGC+TGG | 0.408903 | 8.2:+72188878 | None:intergenic |
| AGCTTGGAGAAGACAGATAA+AGG | 0.411473 | 8.2:-72188554 | MS.gene08485:CDS |
| ATGACAGGAGATAATATCTA+TGG | 0.418612 | 8.2:-72189800 | MS.gene08485:intron |
| ACCAGGAATCGACGGAACTT+TGG | 0.420267 | 8.2:+72189481 | None:intergenic |
| TTCACAACCTTGGTTGGAGC+AGG | 0.430119 | 8.2:-72188725 | MS.gene08485:CDS |
| CCTAATCTTATTGTCTTCAC+TGG | 0.435390 | 8.2:-72190485 | MS.gene08485:intron |
| TGGTGAATTCAAGATATTGC+AGG | 0.441134 | 8.2:-72190633 | MS.gene08485:CDS |
| GCGAACGTCTGCGAAGCTTC+GGG | 0.441635 | 8.2:-72189420 | MS.gene08485:intron |
| CGGGAGTGCTCTTGCTCCAT+AGG | 0.441879 | 8.2:+72188453 | None:intergenic |
| TCAAGCCCTCACAGCAACTT+TGG | 0.443834 | 8.2:-72189448 | MS.gene08485:CDS |
| GAATCAAAACTTGTATATTC+CGG | 0.446013 | 8.2:+72188824 | None:intergenic |
| GATATACAACTTTGTTATGC+TGG | 0.461246 | 8.2:-72188641 | MS.gene08485:CDS |
| CAGCATCTTACTGGAATTGA+TGG | 0.463649 | 8.2:-72188482 | MS.gene08485:CDS |
| AAGCTGAGGTTTGATCAAAA+TGG | 0.464942 | 8.2:-72190653 | MS.gene08485:CDS |
| TGATGGCATTAGTTCTGCTT+CGG | 0.465850 | 8.2:-72188762 | MS.gene08485:CDS |
| TACCATGCTTATGGAAAGGC+TGG | 0.468350 | 8.2:-72188608 | MS.gene08485:CDS |
| GCTGCCAAGGCACATGTAGT+AGG | 0.469974 | 8.2:+72190692 | None:intergenic |
| TTTGATTCATCAAACATGAC+AGG | 0.476068 | 8.2:-72188809 | MS.gene08485:CDS |
| CTCGGATTCGGCTAAATCGA+TGG | 0.479660 | 8.2:-72189768 | MS.gene08485:CDS |
| CCAGTGAAGACAATAAGATT+AGG | 0.481572 | 8.2:+72190485 | None:intergenic |
| GTGATCGTGGCCAACGAAAA+CGG | 0.487602 | 8.2:+72188691 | None:intergenic |
| AATTGAATCAAACATTCCTT+GGG | 0.488720 | 8.2:-72189726 | MS.gene08485:CDS |
| AAGAGTGGTGGTAGCTAGCT+TGG | 0.490821 | 8.2:-72188570 | MS.gene08485:CDS |
| GAATTGATGGTGAGGTCCTA+TGG | 0.492398 | 8.2:-72188469 | MS.gene08485:CDS |
| GCAGATATGCACTATGCAAA+TGG | 0.497602 | 8.2:-72190608 | MS.gene08485:CDS |
| GAAGACAGATAAAGGAAGCT+GGG | 0.498542 | 8.2:-72188546 | MS.gene08485:CDS |
| ATGGAAACGGATGGCGGTGA+TGG | 0.500335 | 8.2:-72188779 | MS.gene08485:CDS |
| ATGGAAAGGCTGGATGGTCT+CGG | 0.500554 | 8.2:-72188598 | MS.gene08485:CDS |
| ACCAAGAAGGGTCACTCTCT+AGG | 0.501348 | 8.2:-72189682 | MS.gene08485:CDS |
| AGAGTGACCCTTCTTGGTCA+TGG | 0.502217 | 8.2:+72189687 | None:intergenic |
| CCAAGAAGGGTCACTCTCTA+GGG | 0.503678 | 8.2:-72189681 | MS.gene08485:CDS |
| CTATGGAGCAAGAGCACTCC+CGG | 0.506131 | 8.2:-72188452 | MS.gene08485:intron |
| AGTTCTGCTTCGGTGAACTC+TGG | 0.508388 | 8.2:-72188752 | MS.gene08485:CDS |
| TATCTATGGCTATGATTCCT+CGG | 0.510483 | 8.2:-72189786 | MS.gene08485:CDS |
| AGAAGACAGATAAAGGAAGC+TGG | 0.511022 | 8.2:-72188547 | MS.gene08485:CDS |
| CTGTCAAATCAATTAAATCA+TGG | 0.513487 | 8.2:-72188520 | MS.gene08485:CDS |
| CACGTCTCCTGCTCCAACCA+AGG | 0.523455 | 8.2:+72188718 | None:intergenic |
| CCTCAGAAAGAAGCTGCTCC+TGG | 0.524797 | 8.2:-72188872 | MS.gene08485:CDS |
| AAACTTGTATATTCCGGCAA+GGG | 0.532425 | 8.2:+72188830 | None:intergenic |
| TCGAACCAAAGTTGCTGTGA+GGG | 0.540916 | 8.2:+72189443 | None:intergenic |
| TACAACTTTGTTATGCTGGA+GGG | 0.549153 | 8.2:-72188637 | MS.gene08485:CDS |
| GGTGTGATGAAATATATTGT+TGG | 0.553118 | 8.2:-72189656 | MS.gene08485:CDS |
| TAGGGAACCATGACCAAGAA+GGG | 0.554708 | 8.2:-72189694 | MS.gene08485:CDS |
| AATTCCTACTACATGTGCCT+TGG | 0.562416 | 8.2:-72190696 | MS.gene08485:CDS |
| ATGGTCTCGGAGGGCAAGAG+TGG | 0.563926 | 8.2:-72188585 | MS.gene08485:CDS |
| CCAGGAGCAGCTTCTTTCTG+AGG | 0.564382 | 8.2:+72188872 | None:intergenic |
| GAATGAAAGCAGTAGTATTG+AGG | 0.568711 | 8.2:+72190531 | None:intergenic |
| ATGCTTATGGAAAGGCTGGA+TGG | 0.575168 | 8.2:-72188604 | MS.gene08485:CDS |
| TAAGATTAGGCTTCTCCGCA+AGG | 0.575878 | 8.2:+72190498 | None:intergenic |
| CATTCATAGGATGATCCTTG+CGG | 0.577248 | 8.2:-72190513 | MS.gene08485:CDS |
| AACAAGAGAATCAGAAGCTG+AGG | 0.584513 | 8.2:-72190667 | MS.gene08485:CDS |
| TTAGGGAACCATGACCAAGA+AGG | 0.585354 | 8.2:-72189695 | MS.gene08485:CDS |
| CGGATACCATGCTTATGGAA+AGG | 0.585787 | 8.2:-72188612 | MS.gene08485:CDS |
| ATACAACTTTGTTATGCTGG+AGG | 0.586077 | 8.2:-72188638 | MS.gene08485:CDS |
| TGAATCAAACATTCCTTGGG+TGG | 0.587546 | 8.2:-72189723 | MS.gene08485:CDS |
| AAAGGCTGGATGGTCTCGGA+GGG | 0.592813 | 8.2:-72188594 | MS.gene08485:CDS |
| AAAACTTGTATATTCCGGCA+AGG | 0.600274 | 8.2:+72188829 | None:intergenic |
| GGTTGGAGCAGGAGACGTGA+AGG | 0.600894 | 8.2:-72188714 | MS.gene08485:CDS |
| GTCTCGGAGGGCAAGAGTGG+TGG | 0.601019 | 8.2:-72188582 | MS.gene08485:CDS |
| CATCGATTTAGCCGAATCCG+AGG | 0.606710 | 8.2:+72189769 | None:intergenic |
| ATCCAGCCTTTCCATAAGCA+TGG | 0.607593 | 8.2:+72188606 | None:intergenic |
| CAATCATAACCAGGAATCGA+CGG | 0.608329 | 8.2:+72189473 | None:intergenic |
| GACAGGTGTGAAAATGGAAA+CGG | 0.610026 | 8.2:-72188792 | MS.gene08485:CDS |
| AACTTGTATATTCCGGCAAG+GGG | 0.613492 | 8.2:+72188831 | None:intergenic |
| GAAAGGCTGGATGGTCTCGG+AGG | 0.616402 | 8.2:-72188595 | MS.gene08485:CDS |
| AAGACAGATAAAGGAAGCTG+GGG | 0.619330 | 8.2:-72188545 | MS.gene08485:CDS |
| AACAATAACTTGGAGATTGG+TGG | 0.620162 | 8.2:-72189572 | MS.gene08485:CDS |
| AGAAATCATTGAGGTGATCG+TGG | 0.620262 | 8.2:+72188678 | None:intergenic |
| TTCCCTAAAACAGCCACCCA+AGG | 0.622499 | 8.2:+72189710 | None:intergenic |
| ATGTGAAAGTATGCAAGACC+AGG | 0.624092 | 8.2:+72188854 | None:intergenic |
| GAAGGGTCACTCTCTAGGGA+AGG | 0.624261 | 8.2:-72189677 | MS.gene08485:CDS |
| CTCGAACCAAAGTTGCTGTG+AGG | 0.629960 | 8.2:+72189442 | None:intergenic |
| GGCTTGATCCAATCATAACC+AGG | 0.630760 | 8.2:+72189464 | None:intergenic |
| CAATTGCAGGAGCAAATGCA+AGG | 0.641451 | 8.2:+72189744 | None:intergenic |
| TCAATGATGTGTACTTCTGG+AGG | 0.652650 | 8.2:+72189605 | None:intergenic |
| GCTTGCCGCAGAAATCATTG+AGG | 0.659233 | 8.2:+72188669 | None:intergenic |
| GATCACCTCAATGATTTCTG+CGG | 0.661424 | 8.2:-72188674 | MS.gene08485:CDS |
| TCTTACTGGAATTGATGGTG+AGG | 0.663700 | 8.2:-72188477 | MS.gene08485:CDS |
| CAGTAAGATGCTGATCATCG+AGG | 0.702332 | 8.2:+72188492 | None:intergenic |
| GGTGTGAAAATGGAAACGGA+TGG | 0.712053 | 8.2:-72188788 | MS.gene08485:CDS |
| AAGCACATCCAAACACAGTG+TGG | 0.718793 | 8.2:+72190580 | None:intergenic |
| GTGAAAATGGAAACGGATGG+CGG | 0.749816 | 8.2:-72188785 | MS.gene08485:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAATACAAATCAAAA+TGG | + | chr8.2:72190601-72190620 | None:intergenic | 10.0% |
| !! | AATAATCATTTAAAAATGGA+GGG | - | chr8.2:72188120-72188139 | MS.gene08485:intron | 15.0% |
| !! | ATTGTAGTACTATATATATA+TGG | - | chr8.2:72187881-72187900 | MS.gene08485:intron | 15.0% |
| !! | CTACAATAATCATTTAAAAA+TGG | - | chr8.2:72188116-72188135 | MS.gene08485:intron | 15.0% |
| !!! | CATTTTTAAATGATTATTGT+AGG | + | chr8.2:72188118-72188137 | None:intergenic | 15.0% |
| !!! | TAATATACTTGTTTAGTTTT+TGG | - | chr8.2:72187678-72187697 | MS.gene08485:intron | 15.0% |
| !! | AAATTATGCTACATATTGAA+AGG | - | chr8.2:72189749-72189768 | MS.gene08485:CDS | 20.0% |
| !! | AAGTATTATCTGAGTTTAAA+AGG | - | chr8.2:72190249-72190268 | MS.gene08485:intron | 20.0% |
| !! | AATAAAAGAAATGAAATCAC+AGG | + | chr8.2:72188021-72188040 | None:intergenic | 20.0% |
| !! | AATTATGCTACATATTGAAA+GGG | - | chr8.2:72189750-72189769 | MS.gene08485:CDS | 20.0% |
| !! | AGTATTATCTGAGTTTAAAA+GGG | - | chr8.2:72190250-72190269 | MS.gene08485:intron | 20.0% |
| !! | AGTGAACTTTAAACTATATT+TGG | - | chr8.2:72190097-72190116 | MS.gene08485:intron | 20.0% |
| !! | CAATAATCATTTAAAAATGG+AGG | - | chr8.2:72188119-72188138 | MS.gene08485:intron | 20.0% |
| !! | CATTGAAAATAAAAAGCAAA+AGG | + | chr8.2:72187743-72187762 | None:intergenic | 20.0% |
| !! | GTGAACTTTAAACTATATTT+GGG | - | chr8.2:72190098-72190117 | MS.gene08485:intron | 20.0% |
| !! | TAAAGAGAAACTAGATAATT+TGG | + | chr8.2:72188815-72188834 | None:intergenic | 20.0% |
| !! | TAATTCACTCAAGTATTATA+CGG | - | chr8.2:72187922-72187941 | MS.gene08485:intron | 20.0% |
| !! | TGAACTTTAAACTATATTTG+GGG | - | chr8.2:72190099-72190118 | MS.gene08485:intron | 20.0% |
| !! | TTCTACTAGTTAATTGTAAA+TGG | - | chr8.2:72188158-72188177 | MS.gene08485:intron | 20.0% |
| !!! | GATATTTGTTATGGTATTTT+AGG | + | chr8.2:72189957-72189976 | None:intergenic | 20.0% |
| ! | AATCTATACTTTCTTGATAG+TGG | - | chr8.2:72188621-72188640 | MS.gene08485:CDS | 25.0% |
| ! | AATTGAATCAAACATTCCTT+GGG | - | chr8.2:72188407-72188426 | MS.gene08485:intron | 25.0% |
| ! | ACTAGTTAATTGTAAATGGA+TGG | - | chr8.2:72188162-72188181 | MS.gene08485:intron | 25.0% |
| ! | AGAAAACAAATTTGCATAAC+AGG | + | chr8.2:72188310-72188329 | None:intergenic | 25.0% |
| ! | AGTTATCATTACCAGTTTAT+TGG | - | chr8.2:72188263-72188282 | MS.gene08485:intron | 25.0% |
| ! | ATAGTTGAGTAAACCATAAA+TGG | - | chr8.2:72190280-72190299 | MS.gene08485:intron | 25.0% |
| ! | CCACATGTTGAATTAAAATA+GGG | + | chr8.2:72189147-72189166 | None:intergenic | 25.0% |
| ! | CTGTCAAATCAATTAAATCA+TGG | - | chr8.2:72189613-72189632 | MS.gene08485:CDS | 25.0% |
| ! | GAATCAAAACTTGTATATTC+CGG | + | chr8.2:72189312-72189331 | None:intergenic | 25.0% |
| ! | GTATAATACTTGAGTGAATT+AGG | + | chr8.2:72187923-72187942 | None:intergenic | 25.0% |
| ! | TAATTGTAAATGGATGGAAA+TGG | - | chr8.2:72188168-72188187 | MS.gene08485:intron | 25.0% |
| ! | TTCAGAATATAAAACTTCCA+TGG | + | chr8.2:72190540-72190559 | None:intergenic | 25.0% |
| !! | AAATTTCCTTTAGTTCCTTA+GGG | - | chr8.2:72188859-72188878 | MS.gene08485:CDS | 25.0% |
| !! | ATGATTTTCATCTGTGATAT+TGG | + | chr8.2:72190139-72190158 | None:intergenic | 25.0% |
| !!! | TCTAATTTGGTTTTCATTAC+AGG | - | chr8.2:72190712-72190731 | MS.gene08485:CDS | 25.0% |
| !!! | TGTTATGCAAATTTGTTTTC+TGG | - | chr8.2:72188309-72188328 | MS.gene08485:intron | 25.0% |
| !!! | TTCTGAAATGCTTTATTTGA+AGG | - | chr8.2:72190344-72190363 | MS.gene08485:intron | 25.0% |
| AATAAGCTGCAAATAGCTTA+TGG | - | chr8.2:72189026-72189045 | MS.gene08485:intron | 30.0% | |
| AATACTTAAGCAACTATGCA+TGG | - | chr8.2:72189860-72189879 | MS.gene08485:intron | 30.0% | |
| AATGAAGTTCATGAATTGCA+AGG | - | chr8.2:72190444-72190463 | MS.gene08485:intron | 30.0% | |
| ACGAACAATCACTATATGAT+TGG | - | chr8.2:72190493-72190512 | MS.gene08485:CDS | 30.0% | |
| AGCATTACATGATATCTTAC+CGG | + | chr8.2:72189703-72189722 | None:intergenic | 30.0% | |
| AGTCCAATCATATATCATAG+CGG | - | chr8.2:72189908-72189927 | MS.gene08485:intron | 30.0% | |
| ATACTACTGCTTTCATTCAT+AGG | - | chr8.2:72187607-72187626 | MS.gene08485:intron | 30.0% | |
| ATGAAGTTCATGAATTGCAA+GGG | - | chr8.2:72190445-72190464 | MS.gene08485:intron | 30.0% | |
| ATGACAGGAGATAATATCTA+TGG | - | chr8.2:72188333-72188352 | MS.gene08485:intron | 30.0% | |
| ATTACACTGTGTTGAGTATA+TGG | - | chr8.2:72187789-72187808 | MS.gene08485:intron | 30.0% | |
| CAAATTAGACCATTAATCCA+GGG | + | chr8.2:72190701-72190720 | None:intergenic | 30.0% | |
| CAAGTTCAAAATCACAAATG+TGG | - | chr8.2:72190414-72190433 | MS.gene08485:intron | 30.0% | |
| CAATTGAATCAAACATTCCT+TGG | - | chr8.2:72188406-72188425 | MS.gene08485:intron | 30.0% | |
| CATTCATCTTGTTCCATTTA+TGG | + | chr8.2:72190296-72190315 | None:intergenic | 30.0% | |
| CTTCTAAACAAAATACGACA+TGG | - | chr8.2:72190042-72190061 | MS.gene08485:intron | 30.0% | |
| GAAATGGATAGAATTGATGT+TGG | - | chr8.2:72188184-72188203 | MS.gene08485:intron | 30.0% | |
| GAATATAAAACTTCCATGGA+AGG | + | chr8.2:72190536-72190555 | None:intergenic | 30.0% | |
| GCCACATGTTGAATTAAAAT+AGG | + | chr8.2:72189148-72189167 | None:intergenic | 30.0% | |
| GGAACTAAAGGAAATTTCAA+TGG | + | chr8.2:72188856-72188875 | None:intergenic | 30.0% | |
| GGTGTGATGAAATATATTGT+TGG | - | chr8.2:72188477-72188496 | MS.gene08485:CDS | 30.0% | |
| GTAAGATATCATGTAATGCT+TGG | - | chr8.2:72189703-72189722 | MS.gene08485:CDS | 30.0% | |
| TATCTATAGGAAATTCCTGT+TGG | - | chr8.2:72189827-72189846 | MS.gene08485:intron | 30.0% | |
| TATGGCTTATGTATATACAC+AGG | - | chr8.2:72187807-72187826 | MS.gene08485:intron | 30.0% | |
| TGAACAACAATCCAATAAAC+TGG | + | chr8.2:72188277-72188296 | None:intergenic | 30.0% | |
| TGCACATAATACACAAACAA+TGG | - | chr8.2:72190566-72190585 | MS.gene08485:CDS | 30.0% | |
| TTTGATTCATCAAACATGAC+AGG | - | chr8.2:72189324-72189343 | MS.gene08485:intron | 30.0% | |
| ! | GAAATTTCCTTTAGTTCCTT+AGG | - | chr8.2:72188858-72188877 | MS.gene08485:CDS | 30.0% |
| ! | GATATACAACTTTGTTATGC+TGG | - | chr8.2:72189492-72189511 | MS.gene08485:CDS | 30.0% |
| ! | TCTGAATTTCATGATTTTGG+TGG | - | chr8.2:72187392-72187411 | MS.gene08485:CDS | 30.0% |
| ! | TTTTAATCTTATGTTGTCCC+TGG | - | chr8.2:72190681-72190700 | MS.gene08485:CDS | 30.0% |
| !! | AATTTGTTTTCTGGTATGAC+AGG | - | chr8.2:72188318-72188337 | MS.gene08485:intron | 30.0% |
| !! | ATTTGGTTTAAGCTAGTCTT+TGG | + | chr8.2:72188798-72188817 | None:intergenic | 30.0% |
| !! | GTATTTTGTTTATGTCCAAC+AGG | + | chr8.2:72189845-72189864 | None:intergenic | 30.0% |
| !! | TACACATCATTGATGGTTTT+GGG | - | chr8.2:72188538-72188557 | MS.gene08485:CDS | 30.0% |
| !! | TTTCATGATTTTGGTGGTTA+TGG | - | chr8.2:72187398-72187417 | MS.gene08485:CDS | 30.0% |
| !!! | CCCTATTTTAATTCAACATG+TGG | - | chr8.2:72189144-72189163 | MS.gene08485:intron | 30.0% |
| AAAACTTGTATATTCCGGCA+AGG | + | chr8.2:72189307-72189326 | None:intergenic | 35.0% | |
| AAACATGACAGGTGTGAAAA+TGG | - | chr8.2:72189335-72189354 | MS.gene08485:intron | 35.0% | |
| AAACTTGTATATTCCGGCAA+GGG | + | chr8.2:72189306-72189325 | None:intergenic | 35.0% | |
| AACAATAACTTGGAGATTGG+TGG | - | chr8.2:72188561-72188580 | MS.gene08485:CDS | 35.0% | |
| AAGCTGAGGTTTGATCAAAA+TGG | - | chr8.2:72187480-72187499 | MS.gene08485:intron | 35.0% | |
| ACACCGCTATGATATATGAT+TGG | + | chr8.2:72189914-72189933 | None:intergenic | 35.0% | |
| ACGACATGGAAATAACAGTT+AGG | - | chr8.2:72190056-72190075 | MS.gene08485:intron | 35.0% | |
| AGAGGCAAAAAACAAATTGG+TGG | - | chr8.2:72190739-72190758 | MS.gene08485:CDS | 35.0% | |
| AGCAGAGGCAAAAAACAAAT+TGG | - | chr8.2:72190736-72190755 | MS.gene08485:CDS | 35.0% | |
| ATGTTGGCACTATATTGTTG+TGG | - | chr8.2:72188200-72188219 | MS.gene08485:intron | 35.0% | |
| CACAATCTGTTTACGCAATT+CGG | + | chr8.2:72187989-72188008 | None:intergenic | 35.0% | |
| CCAAATTAGACCATTAATCC+AGG | + | chr8.2:72190702-72190721 | None:intergenic | 35.0% | |
| CCAGTGAAGACAATAAGATT+AGG | + | chr8.2:72187651-72187670 | None:intergenic | 35.0% | |
| CCTAATCTTATTGTCTTCAC+TGG | - | chr8.2:72187648-72187667 | MS.gene08485:intron | 35.0% | |
| CCTGGATTAATGGTCTAATT+TGG | - | chr8.2:72190699-72190718 | MS.gene08485:CDS | 35.0% | |
| CGACATGGAAATAACAGTTA+GGG | - | chr8.2:72190057-72190076 | MS.gene08485:intron | 35.0% | |
| CTTGCATAGGTAGACATAAT+TGG | - | chr8.2:72187963-72187982 | MS.gene08485:intron | 35.0% | |
| GAATGAAAGCAGTAGTATTG+AGG | + | chr8.2:72187605-72187624 | None:intergenic | 35.0% | |
| GACAAGAGAATGAGTAGATA+CGG | - | chr8.2:72190175-72190194 | MS.gene08485:intron | 35.0% | |
| GACATGGAAATAACAGTTAG+GGG | - | chr8.2:72190058-72190077 | MS.gene08485:intron | 35.0% | |
| GCATTACATGATATCTTACC+GGG | + | chr8.2:72189702-72189721 | None:intergenic | 35.0% | |
| GGAATGTTTGATTCAATTGC+AGG | + | chr8.2:72188405-72188424 | None:intergenic | 35.0% | |
| TAGTTGTTCTGTACTTGCAT+AGG | - | chr8.2:72187950-72187969 | MS.gene08485:intron | 35.0% | |
| TATCTATGGCTATGATTCCT+CGG | - | chr8.2:72188347-72188366 | MS.gene08485:intron | 35.0% | |
| TCAAATCATATCTCACAGTG+TGG | + | chr8.2:72189979-72189998 | None:intergenic | 35.0% | |
| TGGTGAATTCAAGATATTGC+AGG | - | chr8.2:72187500-72187519 | MS.gene08485:intron | 35.0% | |
| TTATGTATATACACAGGCGA+GGG | - | chr8.2:72187813-72187832 | MS.gene08485:intron | 35.0% | |
| TTATGTTGTCCCTGGATTAA+TGG | - | chr8.2:72190689-72190708 | MS.gene08485:CDS | 35.0% | |
| ! | ATACAACTTTGTTATGCTGG+AGG | - | chr8.2:72189495-72189514 | MS.gene08485:CDS | 35.0% |
| ! | CACAGTGTGGATATTTGTTA+TGG | + | chr8.2:72189966-72189985 | None:intergenic | 35.0% |
| ! | CTGCAGAAAGCATACATAAA+AGG | - | chr8.2:72189231-72189250 | MS.gene08485:intron | 35.0% |
| ! | GGGTCTGAATTTCATGATTT+TGG | - | chr8.2:72187389-72187408 | MS.gene08485:CDS | 35.0% |
| ! | TACAACTTTGTTATGCTGGA+GGG | - | chr8.2:72189496-72189515 | MS.gene08485:CDS | 35.0% |
| !! | GTACACATCATTGATGGTTT+TGG | - | chr8.2:72188537-72188556 | MS.gene08485:CDS | 35.0% |
| !! | TCTTTTGAGAAAACCTTCCA+TGG | - | chr8.2:72190520-72190539 | MS.gene08485:CDS | 35.0% |
| !!! | GTACAAGAAGCATTTTGAGA+AGG | + | chr8.2:72187579-72187598 | None:intergenic | 35.0% |
| !!! | TGGTTTTGGGAACAATAACT+TGG | - | chr8.2:72188551-72188570 | MS.gene08485:CDS | 35.0% |
| AACAAGAGAATCAGAAGCTG+AGG | - | chr8.2:72187466-72187485 | MS.gene08485:intron | 40.0% | |
| AACAGACCCTAAGGAACTAA+AGG | + | chr8.2:72188868-72188887 | None:intergenic | 40.0% | |
| AACTTGTATATTCCGGCAAG+GGG | + | chr8.2:72189305-72189324 | None:intergenic | 40.0% | |
| AAGACAGATAAAGGAAGCTG+GGG | - | chr8.2:72189588-72189607 | MS.gene08485:CDS | 40.0% | |
| AATTCCTACTACATGTGCCT+TGG | - | chr8.2:72187437-72187456 | MS.gene08485:intron | 40.0% | |
| AGAAATCATTGAGGTGATCG+TGG | + | chr8.2:72189458-72189477 | None:intergenic | 40.0% | |
| AGAAGACAGATAAAGGAAGC+TGG | - | chr8.2:72189586-72189605 | MS.gene08485:CDS | 40.0% | |
| AGCTTGGAGAAGACAGATAA+AGG | - | chr8.2:72189579-72189598 | MS.gene08485:CDS | 40.0% | |
| AGGGAAAGTTCTTTCAAGGT+AGG | - | chr8.2:72190464-72190483 | MS.gene08485:intron | 40.0% | |
| CAATCATAACCAGGAATCGA+CGG | + | chr8.2:72188663-72188682 | None:intergenic | 40.0% | |
| CAGCATCTTACTGGAATTGA+TGG | - | chr8.2:72189651-72189670 | MS.gene08485:CDS | 40.0% | |
| CATTCATAGGATGATCCTTG+CGG | - | chr8.2:72187620-72187639 | MS.gene08485:intron | 40.0% | |
| CCATCAATGATGTGTACTTC+TGG | + | chr8.2:72188534-72188553 | None:intergenic | 40.0% | |
| CTTATGTATATACACAGGCG+AGG | - | chr8.2:72187812-72187831 | MS.gene08485:intron | 40.0% | |
| GAAGACAGATAAAGGAAGCT+GGG | - | chr8.2:72189587-72189606 | MS.gene08485:CDS | 40.0% | |
| GAATGTAAGAAGAGATGCTC+TGG | - | chr8.2:72190311-72190330 | MS.gene08485:intron | 40.0% | |
| GACAGGTGTGAAAATGGAAA+CGG | - | chr8.2:72189341-72189360 | MS.gene08485:intron | 40.0% | |
| GATCACCTCAATGATTTCTG+CGG | - | chr8.2:72189459-72189478 | MS.gene08485:CDS | 40.0% | |
| GCAGATATGCACTATGCAAA+TGG | - | chr8.2:72187525-72187544 | MS.gene08485:intron | 40.0% | |
| GGGAACAATAACTTGGAGAT+TGG | - | chr8.2:72188558-72188577 | MS.gene08485:CDS | 40.0% | |
| GTTTGTTCAAACAGACCCTA+AGG | + | chr8.2:72188877-72188896 | None:intergenic | 40.0% | |
| TATGTATATACACAGGCGAG+GGG | - | chr8.2:72187814-72187833 | MS.gene08485:intron | 40.0% | |
| TCAATGATGTGTACTTCTGG+AGG | + | chr8.2:72188531-72188550 | None:intergenic | 40.0% | |
| TGAATCAAACATTCCTTGGG+TGG | - | chr8.2:72188410-72188429 | MS.gene08485:intron | 40.0% | |
| TGCAAGGGAAAGTTCTTTCA+AGG | - | chr8.2:72190460-72190479 | MS.gene08485:intron | 40.0% | |
| TGGAAAAACCACACTGTGTT+TGG | - | chr8.2:72187545-72187564 | MS.gene08485:intron | 40.0% | |
| ! | ATGTGAAAGTATGCAAGACC+AGG | + | chr8.2:72189282-72189301 | None:intergenic | 40.0% |
| ! | CCAGAAGTACACATCATTGA+TGG | - | chr8.2:72188531-72188550 | MS.gene08485:CDS | 40.0% |
| ! | GTTTTCATTACAGGAAGCAG+AGG | - | chr8.2:72190721-72190740 | MS.gene08485:CDS | 40.0% |
| !! | GCTTTATTTGAAGGCTCAGA+TGG | - | chr8.2:72190353-72190372 | MS.gene08485:intron | 40.0% |
| !! | TCTTACTGGAATTGATGGTG+AGG | - | chr8.2:72189656-72189675 | MS.gene08485:CDS | 40.0% |
| !! | TGATGGCATTAGTTCTGCTT+CGG | - | chr8.2:72189371-72189390 | MS.gene08485:intron | 40.0% |
| !! | TTTTGGTGGTTATGGTGTCA+TGG | - | chr8.2:72187406-72187425 | MS.gene08485:intron | 40.0% |
| !!! | ATTCTCTTGTTTTGCTGCCA+AGG | + | chr8.2:72187457-72187476 | None:intergenic | 40.0% |
| !!! | TGGTTATGGTGTCATGGTTT+TGG | - | chr8.2:72187412-72187431 | MS.gene08485:intron | 40.0% |
| AAGCACATCCAAACACAGTG+TGG | + | chr8.2:72187556-72187575 | None:intergenic | 45.0% | |
| ATACTTTCACATCCCCTTGC+CGG | - | chr8.2:72189290-72189309 | MS.gene08485:intron | 45.0% | |
| ATCCAGCCTTTCCATAAGCA+TGG | + | chr8.2:72189530-72189549 | None:intergenic | 45.0% | |
| ATGCTTATGGAAAGGCTGGA+TGG | - | chr8.2:72189529-72189548 | MS.gene08485:CDS | 45.0% | |
| CAATTGCAGGAGCAAATGCA+AGG | + | chr8.2:72188392-72188411 | None:intergenic | 45.0% | |
| CAGTAAGATGCTGATCATCG+AGG | + | chr8.2:72189644-72189663 | None:intergenic | 45.0% | |
| CGGATACCATGCTTATGGAA+AGG | - | chr8.2:72189521-72189540 | MS.gene08485:CDS | 45.0% | |
| CTCGATGATCAGCATCTTAC+TGG | - | chr8.2:72189642-72189661 | MS.gene08485:CDS | 45.0% | |
| GGCTTGATCCAATCATAACC+AGG | + | chr8.2:72188672-72188691 | None:intergenic | 45.0% | |
| GGTGTGAAAATGGAAACGGA+TGG | - | chr8.2:72189345-72189364 | MS.gene08485:intron | 45.0% | |
| GGTTTCTTCACAACCTTGGT+TGG | - | chr8.2:72189402-72189421 | MS.gene08485:intron | 45.0% | |
| GTGAAAATGGAAACGGATGG+CGG | - | chr8.2:72189348-72189367 | MS.gene08485:intron | 45.0% | |
| TAAGATTAGGCTTCTCCGCA+AGG | + | chr8.2:72187638-72187657 | None:intergenic | 45.0% | |
| TACCATGCTTATGGAAAGGC+TGG | - | chr8.2:72189525-72189544 | MS.gene08485:CDS | 45.0% | |
| TAGGGAACCATGACCAAGAA+GGG | - | chr8.2:72188439-72188458 | MS.gene08485:intron | 45.0% | |
| TCGAACCAAAGTTGCTGTGA+GGG | + | chr8.2:72188693-72188712 | None:intergenic | 45.0% | |
| TGATTTCTGCGGCAAGCTAA+TGG | - | chr8.2:72189470-72189489 | MS.gene08485:CDS | 45.0% | |
| TGGCTATGATTCCTCGGATT+CGG | - | chr8.2:72188353-72188372 | MS.gene08485:intron | 45.0% | |
| TTAGGGAACCATGACCAAGA+AGG | - | chr8.2:72188438-72188457 | MS.gene08485:intron | 45.0% | |
| ! | CTCTGGTTTCTTCACAACCT+TGG | - | chr8.2:72189398-72189417 | MS.gene08485:intron | 45.0% |
| ! | CTTTGTTATGCTGGAGGGTT+CGG | - | chr8.2:72189501-72189520 | MS.gene08485:CDS | 45.0% |
| ! | GGCTCAGATGGTGTTAAAAC+AGG | - | chr8.2:72190365-72190384 | MS.gene08485:intron | 45.0% |
| !! | ATTCCTTGGGTGGCTGTTTT+AGG | - | chr8.2:72188420-72188439 | MS.gene08485:intron | 45.0% |
| !! | CGTCGATTCCTGGTTATGAT+TGG | - | chr8.2:72188661-72188680 | MS.gene08485:CDS | 45.0% |
| !! | GAATTGATGGTGAGGTCCTA+TGG | - | chr8.2:72189664-72189683 | MS.gene08485:CDS | 45.0% |
| !! | TTCCTTGGGTGGCTGTTTTA+GGG | - | chr8.2:72188421-72188440 | MS.gene08485:intron | 45.0% |
| !! | TTGGAGATTGGTGGTGTTCA+AGG | - | chr8.2:72188570-72188589 | MS.gene08485:CDS | 45.0% |
| !! | AAAAAATTATAATTATCTAT+AGG | - | chr8.2:72189814-72189833 | MS.gene08485:intron | 5.0% |
| !!! | AATTTTTTTTTTTTTTTTGA+GGG | + | chr8.2:72189802-72189821 | None:intergenic | 5.0% |
| !!! | TAATTTTTTTTTTTTTTTTG+AGG | + | chr8.2:72189803-72189822 | None:intergenic | 5.0% |
| !!! | TTAATTTTAATATATAACAA+TGG | + | chr8.2:72189186-72189205 | None:intergenic | 5.0% |
| AAGAGTGGTGGTAGCTAGCT+TGG | - | chr8.2:72189563-72189582 | MS.gene08485:CDS | 50.0% | |
| ACCAAGAAGGGTCACTCTCT+AGG | - | chr8.2:72188451-72188470 | MS.gene08485:intron | 50.0% | |
| ACCAGGAATCGACGGAACTT+TGG | + | chr8.2:72188655-72188674 | None:intergenic | 50.0% | |
| AGAGTGACCCTTCTTGGTCA+TGG | + | chr8.2:72188449-72188468 | None:intergenic | 50.0% | |
| AGTTCTGCTTCGGTGAACTC+TGG | - | chr8.2:72189381-72189400 | MS.gene08485:intron | 50.0% | |
| ATATACACAGGCGAGGGGTA+AGG | - | chr8.2:72187819-72187838 | MS.gene08485:intron | 50.0% | |
| ATGGAAAGGCTGGATGGTCT+CGG | - | chr8.2:72189535-72189554 | MS.gene08485:CDS | 50.0% | |
| CCAAGAAGGGTCACTCTCTA+GGG | - | chr8.2:72188452-72188471 | MS.gene08485:intron | 50.0% | |
| CTCGAACCAAAGTTGCTGTG+AGG | + | chr8.2:72188694-72188713 | None:intergenic | 50.0% | |
| CTCGGATTCGGCTAAATCGA+TGG | - | chr8.2:72188365-72188384 | MS.gene08485:intron | 50.0% | |
| GCTTGCCGCAGAAATCATTG+AGG | + | chr8.2:72189467-72189486 | None:intergenic | 50.0% | |
| GGGTTCGGATACCATGCTTA+TGG | - | chr8.2:72189516-72189535 | MS.gene08485:CDS | 50.0% | |
| GTGATCGTGGCCAACGAAAA+CGG | + | chr8.2:72189445-72189464 | None:intergenic | 50.0% | |
| TATACACAGGCGAGGGGTAA+GGG | - | chr8.2:72187820-72187839 | MS.gene08485:intron | 50.0% | |
| TCAAGCCCTCACAGCAACTT+TGG | - | chr8.2:72188685-72188704 | MS.gene08485:CDS | 50.0% | |
| TGCTCAACTCGACGCTTTCA+AGG | - | chr8.2:72190206-72190225 | MS.gene08485:intron | 50.0% | |
| TTCACAACCTTGGTTGGAGC+AGG | - | chr8.2:72189408-72189427 | MS.gene08485:intron | 50.0% | |
| TTCCCTAAAACAGCCACCCA+AGG | + | chr8.2:72188426-72188445 | None:intergenic | 50.0% | |
| !! | CATCGATTTAGCCGAATCCG+AGG | + | chr8.2:72188367-72188386 | None:intergenic | 50.0% |
| !! | TCCAAAGTTCCGTCGATTCC+TGG | - | chr8.2:72188651-72188670 | MS.gene08485:CDS | 50.0% |
| AAAGGCTGGATGGTCTCGGA+GGG | - | chr8.2:72189539-72189558 | MS.gene08485:CDS | 55.0% | |
| AGCGAACGTCTGCGAAGCTT+CGG | - | chr8.2:72188712-72188731 | MS.gene08485:CDS | 55.0% | |
| ATACACAGGCGAGGGGTAAG+GGG | - | chr8.2:72187821-72187840 | MS.gene08485:intron | 55.0% | |
| CCAGGAGCAGCTTCTTTCTG+AGG | + | chr8.2:72189264-72189283 | None:intergenic | 55.0% | |
| CCCTAGAGAGTGACCCTTCT+TGG | + | chr8.2:72188455-72188474 | None:intergenic | 55.0% | |
| CCTCAGAAAGAAGCTGCTCC+TGG | - | chr8.2:72189261-72189280 | MS.gene08485:intron | 55.0% | |
| GCTGCCAAGGCACATGTAGT+AGG | + | chr8.2:72187444-72187463 | None:intergenic | 55.0% | |
| ! | ATGGAAACGGATGGCGGTGA+TGG | - | chr8.2:72189354-72189373 | MS.gene08485:intron | 55.0% |
| ! | GAAGGGTCACTCTCTAGGGA+AGG | - | chr8.2:72188456-72188475 | MS.gene08485:CDS | 55.0% |
| !! | CTATGGAGCAAGAGCACTCC+CGG | - | chr8.2:72189681-72189700 | MS.gene08485:CDS | 55.0% |
| !! | GACGTGAAGGCCGTTTTCGT+TGG | - | chr8.2:72189432-72189451 | MS.gene08485:CDS | 55.0% |
| !! | GCAGCTTCTTTCTGAGGTGC+TGG | + | chr8.2:72189258-72189277 | None:intergenic | 55.0% |
| ATGGTCTCGGAGGGCAAGAG+TGG | - | chr8.2:72189548-72189567 | MS.gene08485:CDS | 60.0% | |
| CACGTCTCCTGCTCCAACCA+AGG | + | chr8.2:72189418-72189437 | None:intergenic | 60.0% | |
| GAAAGGCTGGATGGTCTCGG+AGG | - | chr8.2:72189538-72189557 | MS.gene08485:CDS | 60.0% | |
| GCGAACGTCTGCGAAGCTTC+GGG | - | chr8.2:72188713-72188732 | MS.gene08485:CDS | 60.0% | |
| GGTTGGAGCAGGAGACGTGA+AGG | - | chr8.2:72189419-72189438 | MS.gene08485:intron | 60.0% | |
| !! | CGGGAGTGCTCTTGCTCCAT+AGG | + | chr8.2:72189683-72189702 | None:intergenic | 60.0% |
| GTCTCGGAGGGCAAGAGTGG+TGG | - | chr8.2:72189551-72189570 | MS.gene08485:CDS | 65.0% | |
| ACAGGCGAGGGGTAAGGGGC+GGG | - | chr8.2:72187825-72187844 | MS.gene08485:intron | 70.0% | |
| CACAGGCGAGGGGTAAGGGG+CGG | - | chr8.2:72187824-72187843 | MS.gene08485:intron | 70.0% | |
| GGGGCGGGGAGTTGAGCTAG+CGG | - | chr8.2:72187840-72187859 | MS.gene08485:intron | 70.0% | |
| CAGGCGAGGGGTAAGGGGCG+GGG | - | chr8.2:72187826-72187845 | MS.gene08485:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 72187387 | 72190768 | 72187387 | ID=MS.gene08485 |
| chr8.2 | mRNA | 72187387 | 72190768 | 72187387 | ID=MS.gene08485.t1;Parent=MS.gene08485 |
| chr8.2 | exon | 72190486 | 72190768 | 72190486 | ID=MS.gene08485.t1.exon1;Parent=MS.gene08485.t1 |
| chr8.2 | CDS | 72190486 | 72190768 | 72190486 | ID=cds.MS.gene08485.t1;Parent=MS.gene08485.t1 |
| chr8.2 | exon | 72189421 | 72189815 | 72189421 | ID=MS.gene08485.t1.exon2;Parent=MS.gene08485.t1 |
| chr8.2 | CDS | 72189421 | 72189815 | 72189421 | ID=cds.MS.gene08485.t1;Parent=MS.gene08485.t1 |
| chr8.2 | exon | 72188453 | 72188918 | 72188453 | ID=MS.gene08485.t1.exon3;Parent=MS.gene08485.t1 |
| chr8.2 | CDS | 72188453 | 72188918 | 72188453 | ID=cds.MS.gene08485.t1;Parent=MS.gene08485.t1 |
| chr8.2 | exon | 72187387 | 72187421 | 72187387 | ID=MS.gene08485.t1.exon4;Parent=MS.gene08485.t1 |
| chr8.2 | CDS | 72187387 | 72187421 | 72187387 | ID=cds.MS.gene08485.t1;Parent=MS.gene08485.t1 |
| Gene Sequence |
| Protein sequence |
