AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20233

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20233.t1 MTR_7g100590 97.877 471 10 0 1 471 1 471 0.0 963
MS.gene20233.t1 MTR_2g093060 53.811 433 142 14 1 408 1 400 2.46e-119 357
MS.gene20233.t1 MTR_2g093060 53.811 433 141 15 1 408 1 399 6.06e-118 354
MS.gene20233.t1 MTR_4g061200 54.273 433 135 13 1 408 1 395 2.32e-116 350
MS.gene20233.t1 MTR_4g061200 55.721 402 121 10 1 381 1 366 5.44e-114 341
MS.gene20233.t1 MTR_2g093060 50.808 433 140 15 1 408 1 385 1.13e-104 319
MS.gene20233.t1 MTR_4g061200 51.270 433 133 14 1 408 1 380 7.34e-102 312
MS.gene20233.t1 MTR_4g061200 52.488 402 119 11 1 381 1 351 3.37e-99 303
MS.gene20233.t1 MTR_5g016810 83.770 191 31 0 124 314 137 327 3.81e-97 302
MS.gene20233.t1 MTR_4g094868 83.420 193 30 1 124 314 161 353 3.08e-96 300
MS.gene20233.t1 MTR_4g094868 83.333 192 31 1 124 314 161 352 6.36e-95 296
MS.gene20233.t1 MTR_5g016810 80.711 197 32 1 124 314 137 333 3.41e-94 294
MS.gene20233.t1 MTR_7g061190 96.503 143 5 0 161 303 3 145 1.96e-85 259
MS.gene20233.t1 MTR_4g094868 80.380 158 30 1 158 314 39 196 1.13e-77 247
MS.gene20233.t1 MTR_1g049140 43.161 329 141 13 1 315 3 299 1.62e-54 187
MS.gene20233.t1 MTR_1g049140 42.553 329 143 12 1 315 3 299 6.67e-54 184
MS.gene20233.t1 MTR_4g127930 49.744 195 86 4 110 293 134 327 1.48e-51 182
MS.gene20233.t1 MTR_1g049140 50.195 257 94 13 1 242 3 240 4.78e-51 174
MS.gene20233.t1 MTR_4g130270 48.168 191 88 3 113 292 24 214 1.56e-50 176
MS.gene20233.t1 MTR_7g009410 48.515 202 87 4 136 323 65 263 1.77e-50 176
MS.gene20233.t1 MTR_7g080460 41.045 268 119 7 82 330 209 456 2.87e-49 179
MS.gene20233.t1 MTR_4g065370 52.071 169 70 3 136 293 163 331 4.25e-49 176
MS.gene20233.t1 MTR_4g065370 44.156 77 41 1 126 200 255 331 7.46e-12 67.8
MS.gene20233.t1 MTR_4g065370 42.857 91 43 2 215 296 150 240 9.80e-11 64.3
MS.gene20233.t1 MTR_2g098180 51.479 169 71 3 136 293 167 335 8.29e-49 175
MS.gene20233.t1 MTR_2g098180 44.156 77 41 1 126 200 259 335 1.37e-11 67.0
MS.gene20233.t1 MTR_5g015070 51.462 171 72 3 136 295 249 419 8.48e-49 176
MS.gene20233.t1 MTR_8g068510 49.490 196 84 5 112 295 106 298 2.30e-48 171
MS.gene20233.t1 MTR_8g068510 36.449 107 63 3 102 203 194 300 6.57e-11 64.3
MS.gene20233.t1 MTR_8g044070 44.545 220 105 5 113 323 31 242 3.48e-48 171
MS.gene20233.t1 MTR_3g103460 49.180 183 84 4 122 295 295 477 6.86e-47 172
MS.gene20233.t1 MTR_8g020510 51.807 166 72 3 136 293 248 413 9.17e-47 171
MS.gene20233.t1 MTR_6g011490 49.425 174 74 3 140 302 65 235 1.57e-46 165
MS.gene20233.t1 MTR_1g017400 50.595 168 75 3 136 295 312 479 3.83e-46 170
MS.gene20233.t1 MTR_4g097520 50.595 168 75 3 136 295 310 477 7.27e-46 169
MS.gene20233.t1 MTR_4g007770 48.598 214 88 6 130 321 30 243 1.17e-44 159
MS.gene20233.t1 MTR_8g044040 47.236 199 93 4 119 307 37 233 1.87e-44 160
MS.gene20233.t1 MTR_3g090510 80.952 105 20 0 167 271 163 267 7.54e-43 156
MS.gene20233.t1 MTR_8g468920 49.215 191 88 3 111 292 43 233 5.42e-41 151
MS.gene20233.t1 MTR_2g460730 46.465 198 96 4 116 303 25 222 3.12e-40 148
MS.gene20233.t1 MTR_5g031880 49.198 187 87 3 117 295 205 391 6.27e-40 150
MS.gene20233.t1 MTR_7g060560 79.048 105 21 1 167 271 156 259 8.03e-40 148
MS.gene20233.t1 MTR_7g091390 45.985 137 60 3 136 262 57 189 1.81e-21 96.7
MS.gene20233.t1 MTR_7g055620 93.182 44 3 0 213 256 6 49 4.98e-21 95.1
MS.gene20233.t1 MTR_1g037030 77.083 48 11 0 205 252 118 165 2.67e-18 84.0
MS.gene20233.t1 MTR_7g091390 47.573 103 47 2 163 262 3 101 6.39e-15 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20233.t1 AT2G28550 53.211 436 153 15 1 408 1 413 1.67e-108 330
MS.gene20233.t1 AT4G36920 66.406 256 76 3 117 369 110 358 1.62e-96 298
MS.gene20233.t1 AT4G36920 66.406 256 76 3 117 369 110 358 1.62e-96 298
MS.gene20233.t1 AT2G28550 50.229 436 151 16 1 408 1 398 4.27e-94 292
MS.gene20233.t1 AT5G67180 78.947 190 40 0 125 314 82 271 2.07e-90 277
MS.gene20233.t1 AT5G67180 78.947 190 40 0 125 314 82 271 3.39e-90 279
MS.gene20233.t1 AT5G67180 84.795 171 26 0 125 295 82 252 2.06e-88 271
MS.gene20233.t1 AT2G28550 57.827 313 99 8 1 289 1 304 4.10e-86 268
MS.gene20233.t1 AT2G28550 59.928 277 79 7 1 254 1 268 7.17e-76 239
MS.gene20233.t1 AT2G28550 59.928 277 79 7 1 254 1 268 7.17e-76 239
MS.gene20233.t1 AT5G67180 77.059 170 36 2 125 293 82 249 1.11e-73 233
MS.gene20233.t1 AT5G60120 38.370 503 218 18 1 455 1 459 1.61e-70 232
MS.gene20233.t1 AT5G60120 38.632 497 218 18 1 455 1 452 3.22e-70 231
MS.gene20233.t1 AT5G60120 44.110 365 138 12 1 330 1 334 6.11e-67 220
MS.gene20233.t1 AT5G60120 44.110 365 138 12 1 330 1 334 6.11e-67 220
MS.gene20233.t1 AT5G60120 44.110 365 138 12 1 330 1 334 6.11e-67 220
MS.gene20233.t1 AT5G60120 37.333 525 215 20 1 455 1 481 9.19e-67 223
MS.gene20233.t1 AT2G28550 52.713 258 88 9 156 408 4 232 8.17e-64 208
MS.gene20233.t1 AT1G72570 48.958 192 85 4 115 293 197 388 2.12e-51 179
MS.gene20233.t1 AT4G37750 43.460 237 107 4 114 323 258 494 4.89e-51 182
MS.gene20233.t1 AT5G57390 48.469 196 89 4 109 293 56 250 1.21e-50 178
MS.gene20233.t1 AT1G51190 44.206 233 103 6 72 293 139 355 2.08e-50 180
MS.gene20233.t1 AT5G57390 48.469 196 89 4 109 293 174 368 4.75e-50 179
MS.gene20233.t1 AT5G17430 48.438 192 87 4 112 292 122 312 1.19e-49 177
MS.gene20233.t1 AT5G17430 48.438 192 87 4 112 292 184 374 2.05e-49 178
MS.gene20233.t1 AT2G39250 39.701 335 123 11 1 326 1 265 3.08e-49 171
MS.gene20233.t1 AT3G20840 50.888 169 72 3 136 293 178 346 7.28e-49 176
MS.gene20233.t1 AT3G20840 44.156 77 41 1 126 200 270 346 8.73e-12 67.8
MS.gene20233.t1 AT2G39250 46.473 241 82 6 1 233 1 202 3.62e-48 166
MS.gene20233.t1 AT3G54320 46.829 205 84 4 120 299 32 236 2.21e-44 161
MS.gene20233.t1 AT5G65510 54.386 171 67 3 136 295 170 340 2.61e-44 161
MS.gene20233.t1 AT3G54320 46.602 206 85 4 120 300 32 237 2.81e-44 161
MS.gene20233.t1 AT5G65510 54.386 171 67 3 136 295 228 398 3.76e-44 162
MS.gene20233.t1 AT5G65510 54.386 171 67 3 136 295 228 398 3.76e-44 162
MS.gene20233.t1 AT3G54990 66.443 149 39 2 97 245 91 228 8.01e-44 154
MS.gene20233.t1 AT3G54990 59.016 183 50 3 97 279 91 248 1.28e-43 157
MS.gene20233.t1 AT5G10510 52.047 171 71 3 136 295 227 397 3.20e-42 157
MS.gene20233.t1 AT5G10510 52.047 171 71 3 136 295 227 397 3.20e-42 157
MS.gene20233.t1 AT5G10510 52.047 171 71 3 136 295 265 435 3.92e-42 158
MS.gene20233.t1 AT5G10510 52.047 171 71 3 136 295 265 435 3.92e-42 158
MS.gene20233.t1 AT5G10510 52.047 171 71 3 136 295 250 420 4.27e-42 157
MS.gene20233.t1 AT5G65510 53.191 141 55 3 136 265 170 310 2.48e-40 147
MS.gene20233.t1 AT1G79700 53.448 174 70 2 130 292 43 216 4.27e-40 147
MS.gene20233.t1 AT1G16060 50.000 188 83 2 116 292 35 222 3.47e-39 145
MS.gene20233.t1 AT5G10510 50.000 168 76 3 136 295 227 394 4.25e-38 146
MS.gene20233.t1 AT5G10510 45.026 191 74 4 136 295 265 455 1.86e-35 139
MS.gene20233.t1 AT1G79700 50.575 174 65 3 130 292 43 206 8.32e-33 127
MS.gene20233.t1 AT3G54320 50.725 138 67 1 163 299 33 170 1.47e-31 124
MS.gene20233.t1 AT3G54320 50.725 138 67 1 163 299 33 170 1.47e-31 124
MS.gene20233.t1 AT1G79700 54.412 136 61 1 158 292 5 140 1.12e-28 113
MS.gene20233.t1 AT1G16060 54.412 136 61 1 158 292 17 152 6.80e-28 112
MS.gene20233.t1 AT1G79700 54.264 129 58 1 165 292 6 134 1.44e-26 107
MS.gene20233.t1 AT2G41710 48.855 131 53 2 136 256 67 193 5.06e-25 107
MS.gene20233.t1 AT2G41710 48.855 131 53 2 136 256 67 193 6.92e-25 107
MS.gene20233.t1 AT2G41710 47.059 136 53 3 136 256 67 198 7.34e-23 100
MS.gene20233.t1 AT2G41710 46.281 121 51 2 146 256 112 228 3.48e-20 93.2
MS.gene20233.t1 AT3G54320 54.167 96 43 1 206 300 1 96 3.43e-19 88.2
MS.gene20233.t1 AT1G16060 55.682 88 38 1 206 292 1 88 8.42e-18 82.4
MS.gene20233.t1 AT1G16060 55.682 88 38 1 206 292 1 88 8.42e-18 82.4
MS.gene20233.t1 AT1G16060 55.682 88 38 1 206 292 1 88 8.42e-18 82.4
MS.gene20233.t1 AT1G16060 55.682 88 38 1 206 292 1 88 8.42e-18 82.4
MS.gene20233.t1 AT3G25730 38.947 95 54 2 128 222 53 143 2.55e-12 68.2
MS.gene20233.t1 AT1G68840 37.383 107 63 2 116 222 44 146 1.29e-11 66.2
MS.gene20233.t1 AT1G68840 37.383 107 63 2 116 222 44 146 1.29e-11 66.2
MS.gene20233.t1 AT2G47520 44.578 83 43 2 122 202 32 113 1.56e-11 63.2

Find 134 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAGCTGCCATGCCCAATT+TGG 0.214682 7.2:+11584335 None:intergenic
ATCATTCCCGATTCGTTTGC+TGG 0.249662 7.2:+11586532 None:intergenic
CTCAATGTTCAGTCATCTTA+TGG 0.249805 7.2:-11584592 MS.gene20233:CDS
GTTTGCAAGTTCAGCGTAAC+TGG 0.251291 7.2:-11584795 MS.gene20233:CDS
AATCTGCTCCCGTTCCAAAT+TGG 0.265423 7.2:-11584349 MS.gene20233:CDS
CTCCAAAGTCCATATAATAA+TGG 0.282974 7.2:-11584317 MS.gene20233:CDS
GACGTTGGGAATCGCATATT+TGG 0.285512 7.2:-11586339 MS.gene20233:intron
AAAGTTGACCCATTATTATA+TGG 0.312812 7.2:+11584308 None:intergenic
GCTCGTATGGGACAGTTTCT+TGG 0.324940 7.2:-11585539 MS.gene20233:CDS
GGAAGCGTTGTTGTTGAGTA+TGG 0.328168 7.2:+11586633 None:intergenic
ATCTGCTCCCGTTCCAAATT+GGG 0.340346 7.2:-11584348 MS.gene20233:CDS
CGTTGATAGTTTGAGGACTC+TGG 0.357542 7.2:-11584625 MS.gene20233:intron
ACCCATTATTATATGGACTT+TGG 0.377342 7.2:+11584315 None:intergenic
TTATGTAGGTATATATATCT+TGG 0.380122 7.2:-11585377 MS.gene20233:intron
TTCTCTGCTGCAGCATCATC+AGG 0.380972 7.2:-11584272 MS.gene20233:CDS
CTGAGCATCAACCTCCAATC+TGG 0.386362 7.2:-11584555 MS.gene20233:CDS
ACCATTACACTCTTATCAAC+AGG 0.390876 7.2:+11584763 None:intergenic
GTTACTTTCTACCGGAGAAC+TGG 0.391369 7.2:-11586361 MS.gene20233:CDS
TCCAAAGTCCATATAATAAT+GGG 0.393361 7.2:-11584316 MS.gene20233:CDS
TTCTTCACCGGCTGAGGTCG+TGG 0.400221 7.2:+11586427 None:intergenic
GATGCTGCAGCAGAGAAATT+AGG 0.402479 7.2:+11584278 None:intergenic
TAATTACTTTCCCGTGTGTA+AGG 0.413461 7.2:-11584524 MS.gene20233:intron
CTCGTATGGGACAGTTTCTT+GGG 0.413776 7.2:-11585538 MS.gene20233:CDS
TATGTAGGTATATATATCTT+GGG 0.414146 7.2:-11585376 MS.gene20233:intron
TGCCATGCCCAATTTGGAAC+GGG 0.426003 7.2:+11584341 None:intergenic
GGGTGGAGGTATGTTATGTT+TGG 0.445569 7.2:+11584209 None:intergenic
ATTTGAACATCAGAGTTAGA+AGG 0.449742 7.2:+11584844 None:intergenic
GCCGGTGAAGAAGAGTCGTC+GGG 0.459593 7.2:-11586416 MS.gene20233:CDS
TGGACGATGGGAAGCTCGTA+TGG 0.459668 7.2:-11585552 MS.gene20233:CDS
CCTGCAGTAGAAAGAGGGTA+TGG 0.464065 7.2:+11584154 None:intergenic
TACAACAGCTTCGCCGGCGC+CGG 0.464183 7.2:+11586573 None:intergenic
GCAGAATCTTGATCTGAACT+TGG 0.465184 7.2:-11584878 MS.gene20233:CDS
CTATCCGCAGCTGTTGTTGA+AGG 0.465186 7.2:+11584245 None:intergenic
AAGAGCAATAGAGAATAGGA+TGG 0.477231 7.2:-11584372 MS.gene20233:CDS
ACTCTCCTCCGTCGTTCAGA+TGG 0.481608 7.2:-11586749 MS.gene20233:CDS
CTACCGGAGAACTGGACGTT+GGG 0.483697 7.2:-11586353 MS.gene20233:CDS
AGGAAAGAGCAATAGAGAAT+AGG 0.487980 7.2:-11584376 MS.gene20233:CDS
CCATACCCTCTTTCTACTGC+AGG 0.495357 7.2:-11584154 MS.gene20233:CDS
TTTGAGGCTAGTTCTTATGA+AGG 0.495376 7.2:-11585137 MS.gene20233:CDS
ACTGAAGATTCATGCTCTTA+CGG 0.496241 7.2:-11586679 MS.gene20233:CDS
TAGTACCATCGTTATCAGCC+TGG 0.496630 7.2:+11585102 None:intergenic
TGCTCTTACGGCGATGCATA+CGG 0.502837 7.2:-11586667 MS.gene20233:CDS
TGTCCGTACAACAGCTTCGC+CGG 0.508835 7.2:+11586567 None:intergenic
GTAGAAAGAGGGTATGGGGC+TGG 0.510625 7.2:+11584160 None:intergenic
ATCGTGGTGTTACTTTCTAC+CGG 0.518398 7.2:-11586369 MS.gene20233:CDS
TAATTAGTACCACTCCAGAT+TGG 0.520137 7.2:+11584541 None:intergenic
TGTTGCTCCACGACCTCAGC+CGG 0.520275 7.2:-11586434 MS.gene20233:CDS
CGACTCTTCTTCACCGGCTG+AGG 0.520783 7.2:+11586421 None:intergenic
AACATGCACCACAGTGGAAG+TGG 0.520906 7.2:-11584817 MS.gene20233:CDS
ATTCCCAACGTCCAGTTCTC+CGG 0.521427 7.2:+11586350 None:intergenic
ATGGGGCTGGAGTTAGTCGC+TGG 0.523340 7.2:+11584173 None:intergenic
TGAAGGAGAGTTAACTTCCC+AGG 0.523464 7.2:-11585120 MS.gene20233:CDS
GTCGCTGGAGTAGGAAAATG+AGG 0.525924 7.2:+11584188 None:intergenic
GAGCTTCAACACTCCGGCGC+CGG 0.528911 7.2:-11586586 MS.gene20233:CDS
CGGTACGCCACCGTGATGAT+CGG 0.529586 7.2:+11586471 None:intergenic
AGGTTGATGCTCAGATGCTA+TGG 0.530023 7.2:+11584564 None:intergenic
TGTGGAAAACAAGTATACTT+AGG 0.532079 7.2:-11586201 MS.gene20233:intron
CTGCTATAAAATGCAATGGA+AGG 0.535486 7.2:-11585175 MS.gene20233:CDS
CTGCAGTAGAAAGAGGGTAT+GGG 0.539113 7.2:+11584155 None:intergenic
CGATCATCACGGTGGCGTAC+CGG 0.539554 7.2:-11586470 MS.gene20233:CDS
CCCCGACGACTCTTCTTCAC+CGG 0.545486 7.2:+11586415 None:intergenic
CTGGAGTTAGTCGCTGGAGT+AGG 0.547085 7.2:+11584179 None:intergenic
GCCGGAGTGTTGAAGCTCAC+CGG 0.549298 7.2:+11586591 None:intergenic
GTTGATAGTTTGAGGACTCT+GGG 0.550553 7.2:-11584624 MS.gene20233:intron
GACAGAGTACTGGTTTCTCA+AGG 0.553049 7.2:-11585613 MS.gene20233:CDS
TCAGCTCCTGCAGTAGAAAG+AGG 0.553716 7.2:+11584148 None:intergenic
TGATTACAGAGCGTATGATA+AGG 0.555672 7.2:-11585198 MS.gene20233:intron
CTCCCGTTCCAAATTGGGCA+TGG 0.556092 7.2:-11584343 MS.gene20233:CDS
TTATGATGAAGATATAAAGC+AGG 0.557521 7.2:-11585866 MS.gene20233:intron
GCGCCGGCGAAGCTGTTGTA+CGG 0.557964 7.2:-11586570 MS.gene20233:CDS
TACTGCGAGCTTCGTGACCT+CGG 0.565421 7.2:+11586391 None:intergenic
ATCTGAACGACGGAGGAGAG+TGG 0.568541 7.2:+11586751 None:intergenic
ATTCTGCGTAGACAGAGTAC+TGG 0.571541 7.2:-11585623 MS.gene20233:CDS
GAGTAGGAAAATGAGGGTGG+AGG 0.571882 7.2:+11584195 None:intergenic
AGCCGGTGAAGAAGAGTCGT+CGG 0.574425 7.2:-11586417 MS.gene20233:CDS
GTTCAGATGGAAGATTCATC+CGG 0.575771 7.2:-11586736 MS.gene20233:CDS
CGAGCTGCGATAAAGTTTCG+TGG 0.575785 7.2:-11585922 MS.gene20233:CDS
TGCAGTAGAAAGAGGGTATG+GGG 0.576798 7.2:+11584156 None:intergenic
TATCCGCAGCTGTTGTTGAA+GGG 0.577107 7.2:+11584246 None:intergenic
TGCTATAAAATGCAATGGAA+GGG 0.577688 7.2:-11585174 MS.gene20233:CDS
CGCCTTCTGAGAGTAGAGGA+TGG 0.578820 7.2:-11586507 MS.gene20233:CDS
GTCGACAACGGTACTATCTC+CGG 0.580552 7.2:-11586610 MS.gene20233:CDS
TTACCTTGCCGCAGCATGCG+CGG 0.580853 7.2:+11586053 None:intergenic
TCTACCGGAGAACTGGACGT+TGG 0.583316 7.2:-11586354 MS.gene20233:CDS
ATACCGCGCATGCTGCGGCA+AGG 0.583419 7.2:-11586056 MS.gene20233:intron
GCAACAACAACAGTCTGCTC+CGG 0.583622 7.2:+11586451 None:intergenic
CAGAATCTTGATCTGAACTT+GGG 0.584312 7.2:-11584877 MS.gene20233:CDS
AAGGCTGCTATAAAATGCAA+TGG 0.584344 7.2:-11585179 MS.gene20233:CDS
TTAGTACCACTCCAGATTGG+AGG 0.585536 7.2:+11584544 None:intergenic
GACGGAGGAATCAAAGCTAC+CGG 0.588222 7.2:+11586717 None:intergenic
TTTGCAAGTTCAGCGTAACT+GGG 0.588454 7.2:-11584794 MS.gene20233:CDS
TCTGCATAAATGTGGACGAT+GGG 0.589018 7.2:-11585564 MS.gene20233:CDS
AGTACCATCGTTATCAGCCT+GGG 0.589962 7.2:+11585103 None:intergenic
AGAAGAGTCGTCGGGGACCG+AGG 0.591121 7.2:-11586408 MS.gene20233:CDS
ATCCATCCTCTACTCTCAGA+AGG 0.594152 7.2:+11586505 None:intergenic
CTGCCATGCCCAATTTGGAA+CGG 0.595613 7.2:+11584340 None:intergenic
GACGGAGGAGAGTGGAAGAG+AGG 0.597615 7.2:+11586759 None:intergenic
ATAGCGAGCTAGATGCTGCA+AGG 0.598807 7.2:-11585346 MS.gene20233:intron
ACAGAGTACTGGTTTCTCAA+GGG 0.599902 7.2:-11585612 MS.gene20233:CDS
ATTTGATACCGCGCATGCTG+CGG 0.600999 7.2:-11586061 MS.gene20233:CDS
CAGAGTACTGGTTTCTCAAG+GGG 0.605158 7.2:-11585611 MS.gene20233:CDS
AAAGTTTCGTGGCGTCGATG+CGG 0.606313 7.2:-11585911 MS.gene20233:CDS
GGACGATGGGAAGCTCGTAT+GGG 0.611195 7.2:-11585551 MS.gene20233:CDS
CAGCTCCTGCAGTAGAAAGA+GGG 0.613397 7.2:+11584149 None:intergenic
ATTAGTATTCACCTTACACA+CGG 0.613966 7.2:+11584513 None:intergenic
TGAACATCAGAGTTAGAAGG+AGG 0.614498 7.2:+11584847 None:intergenic
GCCTGTTGATAAGAGTGTAA+TGG 0.619307 7.2:-11584764 MS.gene20233:intron
AATTTCTCGTCCGATCATCA+CGG 0.619679 7.2:-11586481 MS.gene20233:CDS
AACAACGCTTCCGTCGACAA+CGG 0.620133 7.2:-11586622 MS.gene20233:CDS
GGAGTTACTCTGCATAAATG+TGG 0.624873 7.2:-11585572 MS.gene20233:CDS
CTCTGCATAAATGTGGACGA+TGG 0.629073 7.2:-11585565 MS.gene20233:CDS
ATCTCGCCTTCTGAGAGTAG+AGG 0.632485 7.2:-11586511 MS.gene20233:CDS
TCCGGTGAGCTTCAACACTC+CGG 0.632556 7.2:-11586592 MS.gene20233:CDS
GTAGATGAATAACTTTACAA+AGG 0.633971 7.2:-11585660 MS.gene20233:intron
TCACGAAGCTCGCAGTATCG+TGG 0.635514 7.2:-11586385 MS.gene20233:CDS
AGAGCATGAATCTTCAGTGT+CGG 0.641138 7.2:+11586684 None:intergenic
GGTTGATGCTCAGATGCTAT+GGG 0.641889 7.2:+11584565 None:intergenic
GTCGGCAGCGTTGACGACGG+AGG 0.642992 7.2:+11586702 None:intergenic
GCTGCAGCAGAGAAATTAGG+TGG 0.656992 7.2:+11584281 None:intergenic
CTGGAGTAGGAAAATGAGGG+TGG 0.661562 7.2:+11584192 None:intergenic
CATCAACCTCCAATCTGGAG+TGG 0.662314 7.2:-11584550 MS.gene20233:CDS
GGAGATAGTACCGTTGTCGA+CGG 0.663908 7.2:+11586612 None:intergenic
ATCTTCCATCTGAACGACGG+AGG 0.664445 7.2:+11586744 None:intergenic
AGTGTCGGCAGCGTTGACGA+CGG 0.674336 7.2:+11586699 None:intergenic
TTAGTATTCACCTTACACAC+GGG 0.680796 7.2:+11584514 None:intergenic
AGGGGAAGTTCTAAATACAG+AGG 0.681558 7.2:-11585593 MS.gene20233:CDS
ATTCCCTTCAACAACAGCTG+CGG 0.681754 7.2:-11584249 MS.gene20233:CDS
TGAATCTTCCATCTGAACGA+CGG 0.693422 7.2:+11586741 None:intergenic
TCGCTGGAGTAGGAAAATGA+GGG 0.701704 7.2:+11584189 None:intergenic
CCGGTGAAGAAGAGTCGTCG+GGG 0.715698 7.2:-11586415 MS.gene20233:CDS
TTCTCGTCCGATCATCACGG+TGG 0.718908 7.2:-11586478 MS.gene20233:CDS
ACTTCCCAGGCTGATAACGA+TGG 0.728400 7.2:-11585107 MS.gene20233:intron
ATGATGAACATGCACCACAG+TGG 0.729813 7.2:-11584823 MS.gene20233:CDS
CTTGCAAACCACTTCCACTG+TGG 0.732557 7.2:+11584809 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATCAAATTAAACTAA+AGG + chr7.2:11585438-11585457 None:intergenic 10.0%
!!! TATTTAGTTCTTAATTATAT+TGG - chr7.2:11585506-11585525 MS.gene20233:intron 10.0%
!! AAAGATCAAAATCTAAAAAA+AGG + chr7.2:11584833-11584852 None:intergenic 15.0%
!! ATGATCCAAAATATTTAATT+AGG + chr7.2:11585660-11585679 None:intergenic 15.0%
!! TATAATTAAGAACTAAATAC+TGG + chr7.2:11585505-11585524 None:intergenic 15.0%
!! TGATTATAAAACCAAAAAAA+AGG + chr7.2:11585880-11585899 None:intergenic 15.0%
!!! AAATGCCTAATTAAATATTT+TGG - chr7.2:11585652-11585671 MS.gene20233:CDS 15.0%
!!! TAAATATTGAATGTTTTTCA+TGG - chr7.2:11584945-11584964 MS.gene20233:intron 15.0%
!!! TCTTTGAAATTTAATTTTTC+AGG - chr7.2:11584848-11584867 MS.gene20233:CDS 15.0%
!! ATTATTTGTGTTCTATTTAC+AGG - chr7.2:11586539-11586558 MS.gene20233:CDS 20.0%
!! ATTTATCAATCATATATAGC+AGG - chr7.2:11585617-11585636 MS.gene20233:CDS 20.0%
!! TATGTAGGTATATATATCTT+GGG - chr7.2:11585559-11585578 MS.gene20233:CDS 20.0%
!! TTATGTAGGTATATATATCT+TGG - chr7.2:11585558-11585577 MS.gene20233:CDS 20.0%
!!! TTGAAATTTAATTTTTCAGG+TGG - chr7.2:11584851-11584870 MS.gene20233:CDS 20.0%
! AAAGTTGACCCATTATTATA+TGG + chr7.2:11586630-11586649 None:intergenic 25.0%
! AGGTTAATTGACATACTTTA+AGG + chr7.2:11585964-11585983 None:intergenic 25.0%
! AGTTCTTAATTATATTGGTC+TGG - chr7.2:11585511-11585530 MS.gene20233:intron 25.0%
! GTAGATGAATAACTTTACAA+AGG - chr7.2:11585275-11585294 MS.gene20233:intron 25.0%
! TCCAAAGTCCATATAATAAT+GGG - chr7.2:11586619-11586638 MS.gene20233:CDS 25.0%
! TTAACCTTTACTATTAAGAC+TGG - chr7.2:11585977-11585996 MS.gene20233:intron 25.0%
! TTATGATGAAGATATAAAGC+AGG - chr7.2:11585069-11585088 MS.gene20233:intron 25.0%
!! GTTCTTAATTATATTGGTCT+GGG - chr7.2:11585512-11585531 MS.gene20233:intron 25.0%
!! GTTGTTAATTATATTGGTCT+GGG - chr7.2:11585534-11585553 MS.gene20233:CDS 25.0%
!!! AAGAACTAAATACTGGTTTA+TGG + chr7.2:11585498-11585517 None:intergenic 25.0%
!!! AATCACAAATCAGTCATTTT+AGG + chr7.2:11585468-11585487 None:intergenic 25.0%
ACCCATTATTATATGGACTT+TGG + chr7.2:11586623-11586642 None:intergenic 30.0%
AGAGTGAGTGATAGTTTATA+TGG + chr7.2:11585927-11585946 None:intergenic 30.0%
ATATCTTAAGAATCTTCTGC+TGG - chr7.2:11586504-11586523 MS.gene20233:CDS 30.0%
ATCACCAGTCTTAATAGTAA+AGG + chr7.2:11585984-11586003 None:intergenic 30.0%
ATTAGTATTCACCTTACACA+CGG + chr7.2:11586425-11586444 None:intergenic 30.0%
ATTTGAACATCAGAGTTAGA+AGG + chr7.2:11586094-11586113 None:intergenic 30.0%
CTCCAAAGTCCATATAATAA+TGG - chr7.2:11586618-11586637 MS.gene20233:CDS 30.0%
GGTTGTTAATTATATTGGTC+TGG - chr7.2:11585533-11585552 MS.gene20233:CDS 30.0%
GTCTGGGTTGTTAATTATAT+TGG - chr7.2:11585528-11585547 MS.gene20233:intron 30.0%
TGCTATAAAATGCAATGGAA+GGG - chr7.2:11585761-11585780 MS.gene20233:intron 30.0%
TGTGGAAAACAAGTATACTT+AGG - chr7.2:11584734-11584753 MS.gene20233:intron 30.0%
! TACATGTTGTGTTATTGACT+TGG - chr7.2:11585702-11585721 MS.gene20233:intron 30.0%
! TTGATAAGAGTGTAATGGTA+AGG - chr7.2:11586176-11586195 MS.gene20233:intron 30.0%
!! TCTGTTTTCGTTTTTCTGTA+GGG - chr7.2:11584709-11584728 MS.gene20233:intron 30.0%
AAAAAAAAGGTGAGCCTCAA+TGG + chr7.2:11585867-11585886 None:intergenic 35.0%
AAGAGCAATAGAGAATAGGA+TGG - chr7.2:11586563-11586582 MS.gene20233:CDS 35.0%
AAGGCTGCTATAAAATGCAA+TGG - chr7.2:11585756-11585775 MS.gene20233:intron 35.0%
AATTCATGTGAAAGAGCAGA+GGG + chr7.2:11586248-11586267 None:intergenic 35.0%
ACAGAAAAACGAAAACAGAG+TGG + chr7.2:11584708-11584727 None:intergenic 35.0%
ACCATTACACTCTTATCAAC+AGG + chr7.2:11586175-11586194 None:intergenic 35.0%
ACTGAAGATTCATGCTCTTA+CGG - chr7.2:11584256-11584275 MS.gene20233:CDS 35.0%
AGGAAAGAGCAATAGAGAAT+AGG - chr7.2:11586559-11586578 MS.gene20233:CDS 35.0%
ATTTGGTTAGCATTTCGCAA+TGG - chr7.2:11584613-11584632 MS.gene20233:CDS 35.0%
CAGAATCTTGATCTGAACTT+GGG - chr7.2:11586058-11586077 MS.gene20233:CDS 35.0%
CTCAATGTTCAGTCATCTTA+TGG - chr7.2:11586343-11586362 MS.gene20233:CDS 35.0%
CTGCTATAAAATGCAATGGA+AGG - chr7.2:11585760-11585779 MS.gene20233:intron 35.0%
GTACTACTTATTGACCATTG+AGG - chr7.2:11585850-11585869 MS.gene20233:intron 35.0%
TAATTACTTTCCCGTGTGTA+AGG - chr7.2:11586411-11586430 MS.gene20233:CDS 35.0%
TAATTAGTACCACTCCAGAT+TGG + chr7.2:11586397-11586416 None:intergenic 35.0%
TGATTACAGAGCGTATGATA+AGG - chr7.2:11585737-11585756 MS.gene20233:intron 35.0%
TTAGTATTCACCTTACACAC+GGG + chr7.2:11586424-11586443 None:intergenic 35.0%
! ATATTGGTCTGGGTTTATGT+AGG - chr7.2:11585544-11585563 MS.gene20233:CDS 35.0%
! GGAAGCAGTTACAAATTTTG+AGG - chr7.2:11585782-11585801 MS.gene20233:intron 35.0%
! TTTGAGGCTAGTTCTTATGA+AGG - chr7.2:11585798-11585817 MS.gene20233:intron 35.0%
!! CTCTGTTTTCGTTTTTCTGT+AGG - chr7.2:11584708-11584727 MS.gene20233:intron 35.0%
!! TAATCTGCGTTGATAGTTTG+AGG - chr7.2:11586303-11586322 MS.gene20233:intron 35.0%
!!! ATTGAGGCTCACCTTTTTTT+TGG - chr7.2:11585866-11585885 MS.gene20233:intron 35.0%
AATTTCTCGTCCGATCATCA+CGG - chr7.2:11584454-11584473 MS.gene20233:intron 40.0%
AGAGCATGAATCTTCAGTGT+CGG + chr7.2:11584254-11584273 None:intergenic 40.0%
ATTCATGTGAAAGAGCAGAG+GGG + chr7.2:11586247-11586266 None:intergenic 40.0%
GAATTCATGTGAAAGAGCAG+AGG + chr7.2:11586249-11586268 None:intergenic 40.0%
GCAGAATCTTGATCTGAACT+TGG - chr7.2:11586057-11586076 MS.gene20233:CDS 40.0%
GGAGTTACTCTGCATAAATG+TGG - chr7.2:11585363-11585382 MS.gene20233:CDS 40.0%
GTTCAGATGGAAGATTCATC+CGG - chr7.2:11584199-11584218 MS.gene20233:CDS 40.0%
TCTGCATAAATGTGGACGAT+GGG - chr7.2:11585371-11585390 MS.gene20233:CDS 40.0%
TGAACATCAGAGTTAGAAGG+AGG + chr7.2:11586091-11586110 None:intergenic 40.0%
TGAATCTTCCATCTGAACGA+CGG + chr7.2:11584197-11584216 None:intergenic 40.0%
TTTGCAAGTTCAGCGTAACT+GGG - chr7.2:11586141-11586160 MS.gene20233:intron 40.0%
! CTTTTTCCAGCAAACGAATC+GGG - chr7.2:11584397-11584416 MS.gene20233:intron 40.0%
! GCCTGTTGATAAGAGTGTAA+TGG - chr7.2:11586171-11586190 MS.gene20233:intron 40.0%
!! ACAGAGTACTGGTTTCTCAA+GGG - chr7.2:11585323-11585342 MS.gene20233:intron 40.0%
!! AGGGGAAGTTCTAAATACAG+AGG - chr7.2:11585342-11585361 MS.gene20233:intron 40.0%
!! ATCGTGGTGTTACTTTCTAC+CGG - chr7.2:11584566-11584585 MS.gene20233:CDS 40.0%
!! GCTTTTTCCAGCAAACGAAT+CGG - chr7.2:11584396-11584415 MS.gene20233:intron 40.0%
!! GTTGATAGTTTGAGGACTCT+GGG - chr7.2:11586311-11586330 MS.gene20233:intron 40.0%
!! TCGTTTTTCTGTAGGGATTG+TGG - chr7.2:11584716-11584735 MS.gene20233:intron 40.0%
AATCTGCTCCCGTTCCAAAT+TGG - chr7.2:11586586-11586605 MS.gene20233:CDS 45.0%
AGTACCATCGTTATCAGCCT+GGG + chr7.2:11585835-11585854 None:intergenic 45.0%
ATCCATCCTCTACTCTCAGA+AGG + chr7.2:11584433-11584452 None:intergenic 45.0%
ATCTGCTCCCGTTCCAAATT+GGG - chr7.2:11586587-11586606 MS.gene20233:CDS 45.0%
ATGATGAACATGCACCACAG+TGG - chr7.2:11586112-11586131 MS.gene20233:intron 45.0%
ATTCCCTTCAACAACAGCTG+CGG - chr7.2:11586686-11586705 MS.gene20233:CDS 45.0%
ATTCTGCGTAGACAGAGTAC+TGG - chr7.2:11585312-11585331 MS.gene20233:intron 45.0%
CTCGTATGGGACAGTTTCTT+GGG - chr7.2:11585397-11585416 MS.gene20233:intron 45.0%
CTCTGCATAAATGTGGACGA+TGG - chr7.2:11585370-11585389 MS.gene20233:CDS 45.0%
GACGTTGGGAATCGCATATT+TGG - chr7.2:11584596-11584615 MS.gene20233:CDS 45.0%
GATGCTGCAGCAGAGAAATT+AGG + chr7.2:11586660-11586679 None:intergenic 45.0%
GTTTGCAAGTTCAGCGTAAC+TGG - chr7.2:11586140-11586159 MS.gene20233:intron 45.0%
TAGTACCATCGTTATCAGCC+TGG + chr7.2:11585836-11585855 None:intergenic 45.0%
TATCCGCAGCTGTTGTTGAA+GGG + chr7.2:11586692-11586711 None:intergenic 45.0%
TCGCTGGAGTAGGAAAATGA+GGG + chr7.2:11586749-11586768 None:intergenic 45.0%
TGAAGGAGAGTTAACTTCCC+AGG - chr7.2:11585815-11585834 MS.gene20233:intron 45.0%
TTAGTACCACTCCAGATTGG+AGG + chr7.2:11586394-11586413 None:intergenic 45.0%
! ATCATTCCCGATTCGTTTGC+TGG + chr7.2:11584406-11584425 None:intergenic 45.0%
! CTGCAGTAGAAAGAGGGTAT+GGG + chr7.2:11586783-11586802 None:intergenic 45.0%
! GGGTGGAGGTATGTTATGTT+TGG + chr7.2:11586729-11586748 None:intergenic 45.0%
! GGTTGATGCTCAGATGCTAT+GGG + chr7.2:11586373-11586392 None:intergenic 45.0%
! GTTACTTTCTACCGGAGAAC+TGG - chr7.2:11584574-11584593 MS.gene20233:CDS 45.0%
! TGCAGTAGAAAGAGGGTATG+GGG + chr7.2:11586782-11586801 None:intergenic 45.0%
!! AGGTTGATGCTCAGATGCTA+TGG + chr7.2:11586374-11586393 None:intergenic 45.0%
!! CAGAGTACTGGTTTCTCAAG+GGG - chr7.2:11585324-11585343 MS.gene20233:intron 45.0%
!! CGTTGATAGTTTGAGGACTC+TGG - chr7.2:11586310-11586329 MS.gene20233:intron 45.0%
!! GACAGAGTACTGGTTTCTCA+AGG - chr7.2:11585322-11585341 MS.gene20233:intron 45.0%
!! GGAAGCGTTGTTGTTGAGTA+TGG + chr7.2:11584305-11584324 None:intergenic 45.0%
AACAACGCTTCCGTCGACAA+CGG - chr7.2:11584313-11584332 MS.gene20233:CDS 50.0%
AACATGCACCACAGTGGAAG+TGG - chr7.2:11586118-11586137 MS.gene20233:intron 50.0%
ATAGCGAGCTAGATGCTGCA+AGG - chr7.2:11585589-11585608 MS.gene20233:CDS 50.0%
ATCTTCCATCTGAACGACGG+AGG + chr7.2:11584194-11584213 None:intergenic 50.0%
ATTCCCAACGTCCAGTTCTC+CGG + chr7.2:11584588-11584607 None:intergenic 50.0%
ATTTGATACCGCGCATGCTG+CGG - chr7.2:11584874-11584893 MS.gene20233:CDS 50.0%
CAGCTCCTGCAGTAGAAAGA+GGG + chr7.2:11586789-11586808 None:intergenic 50.0%
CATCAACCTCCAATCTGGAG+TGG - chr7.2:11586385-11586404 MS.gene20233:CDS 50.0%
CCATACCCTCTTTCTACTGC+AGG - chr7.2:11586781-11586800 MS.gene20233:CDS 50.0%
CCTGCAGTAGAAAGAGGGTA+TGG + chr7.2:11586784-11586803 None:intergenic 50.0%
CGAGCTGCGATAAAGTTTCG+TGG - chr7.2:11585013-11585032 MS.gene20233:intron 50.0%
CTATCCGCAGCTGTTGTTGA+AGG + chr7.2:11586693-11586712 None:intergenic 50.0%
CTGAGCATCAACCTCCAATC+TGG - chr7.2:11586380-11586399 MS.gene20233:CDS 50.0%
CTGCCATGCCCAATTTGGAA+CGG + chr7.2:11586598-11586617 None:intergenic 50.0%
CTGGAGTAGGAAAATGAGGG+TGG + chr7.2:11586746-11586765 None:intergenic 50.0%
CTTGCAAACCACTTCCACTG+TGG + chr7.2:11586129-11586148 None:intergenic 50.0%
GACGGAGGAATCAAAGCTAC+CGG + chr7.2:11584221-11584240 None:intergenic 50.0%
GAGTAGGAAAATGAGGGTGG+AGG + chr7.2:11586743-11586762 None:intergenic 50.0%
GCAACAACAACAGTCTGCTC+CGG + chr7.2:11584487-11584506 None:intergenic 50.0%
GCTCGTATGGGACAGTTTCT+TGG - chr7.2:11585396-11585415 MS.gene20233:intron 50.0%
GCTGCAGCAGAGAAATTAGG+TGG + chr7.2:11586657-11586676 None:intergenic 50.0%
GGAGATAGTACCGTTGTCGA+CGG + chr7.2:11584326-11584345 None:intergenic 50.0%
GTCGACAACGGTACTATCTC+CGG - chr7.2:11584325-11584344 MS.gene20233:CDS 50.0%
GTCGCTGGAGTAGGAAAATG+AGG + chr7.2:11586750-11586769 None:intergenic 50.0%
TCAGCTCCTGCAGTAGAAAG+AGG + chr7.2:11586790-11586809 None:intergenic 50.0%
TGCTCTTACGGCGATGCATA+CGG - chr7.2:11584268-11584287 MS.gene20233:CDS 50.0%
TTCTCTGCTGCAGCATCATC+AGG - chr7.2:11586663-11586682 MS.gene20233:CDS 50.0%
! ACTTCCCAGGCTGATAACGA+TGG - chr7.2:11585828-11585847 MS.gene20233:intron 50.0%
! ATCTCGCCTTCTGAGAGTAG+AGG - chr7.2:11584424-11584443 MS.gene20233:intron 50.0%
! TGCCATGCCCAATTTGGAAC+GGG + chr7.2:11586597-11586616 None:intergenic 50.0%
!! AAAGTTTCGTGGCGTCGATG+CGG - chr7.2:11585024-11585043 MS.gene20233:intron 50.0%
ACTCTCCTCCGTCGTTCAGA+TGG - chr7.2:11584186-11584205 MS.gene20233:CDS 55.0%
AGCCGGTGAAGAAGAGTCGT+CGG - chr7.2:11584518-11584537 MS.gene20233:intron 55.0%
ATCTGAACGACGGAGGAGAG+TGG + chr7.2:11584187-11584206 None:intergenic 55.0%
CTACCGGAGAACTGGACGTT+GGG - chr7.2:11584582-11584601 MS.gene20233:CDS 55.0%
CTCCCGTTCCAAATTGGGCA+TGG - chr7.2:11586592-11586611 MS.gene20233:CDS 55.0%
CTGGAGTTAGTCGCTGGAGT+AGG + chr7.2:11586759-11586778 None:intergenic 55.0%
GGACGATGGGAAGCTCGTAT+GGG - chr7.2:11585384-11585403 MS.gene20233:intron 55.0%
TACTGCGAGCTTCGTGACCT+CGG + chr7.2:11584547-11584566 None:intergenic 55.0%
TCACGAAGCTCGCAGTATCG+TGG - chr7.2:11584550-11584569 MS.gene20233:CDS 55.0%
TCCGGTGAGCTTCAACACTC+CGG - chr7.2:11584343-11584362 MS.gene20233:CDS 55.0%
TCTACCGGAGAACTGGACGT+TGG - chr7.2:11584581-11584600 MS.gene20233:CDS 55.0%
TGGACGATGGGAAGCTCGTA+TGG - chr7.2:11585383-11585402 MS.gene20233:intron 55.0%
TGGAGCTGCCATGCCCAATT+TGG + chr7.2:11586603-11586622 None:intergenic 55.0%
TGTCCGTACAACAGCTTCGC+CGG + chr7.2:11584371-11584390 None:intergenic 55.0%
TTCTCGTCCGATCATCACGG+TGG - chr7.2:11584457-11584476 MS.gene20233:intron 55.0%
! CGCCTTCTGAGAGTAGAGGA+TGG - chr7.2:11584428-11584447 MS.gene20233:intron 55.0%
! GTAGAAAGAGGGTATGGGGC+TGG + chr7.2:11586778-11586797 None:intergenic 55.0%
! TGAAAGAGCAGAGGGGCATG+AGG + chr7.2:11586240-11586259 None:intergenic 55.0%
ATGGGGCTGGAGTTAGTCGC+TGG + chr7.2:11586765-11586784 None:intergenic 60.0%
CCCCGACGACTCTTCTTCAC+CGG + chr7.2:11584523-11584542 None:intergenic 60.0%
CCGGTGAAGAAGAGTCGTCG+GGG - chr7.2:11584520-11584539 MS.gene20233:intron 60.0%
CGATCATCACGGTGGCGTAC+CGG - chr7.2:11584465-11584484 MS.gene20233:intron 60.0%
CGGTACGCCACCGTGATGAT+CGG + chr7.2:11584467-11584486 None:intergenic 60.0%
GACGGAGGAGAGTGGAAGAG+AGG + chr7.2:11584179-11584198 None:intergenic 60.0%
GCCGGTGAAGAAGAGTCGTC+GGG - chr7.2:11584519-11584538 MS.gene20233:intron 60.0%
TGTTGCTCCACGACCTCAGC+CGG - chr7.2:11584501-11584520 MS.gene20233:intron 60.0%
TTACCTTGCCGCAGCATGCG+CGG + chr7.2:11584885-11584904 None:intergenic 60.0%
! CGACTCTTCTTCACCGGCTG+AGG + chr7.2:11584517-11584536 None:intergenic 60.0%
! TTCTTCACCGGCTGAGGTCG+TGG + chr7.2:11584511-11584530 None:intergenic 60.0%
!! AGTGTCGGCAGCGTTGACGA+CGG + chr7.2:11584239-11584258 None:intergenic 60.0%
!! GCCGGAGTGTTGAAGCTCAC+CGG + chr7.2:11584347-11584366 None:intergenic 60.0%
AGAAGAGTCGTCGGGGACCG+AGG - chr7.2:11584527-11584546 MS.gene20233:CDS 65.0%
ATACCGCGCATGCTGCGGCA+AGG - chr7.2:11584879-11584898 MS.gene20233:CDS 65.0%
GAGCTTCAACACTCCGGCGC+CGG - chr7.2:11584349-11584368 MS.gene20233:CDS 65.0%
TACAACAGCTTCGCCGGCGC+CGG + chr7.2:11584365-11584384 None:intergenic 65.0%
! GCGCCGGCGAAGCTGTTGTA+CGG - chr7.2:11584365-11584384 MS.gene20233:CDS 65.0%
!! GTCGGCAGCGTTGACGACGG+AGG + chr7.2:11584236-11584255 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 11584148 11586809 11584148 ID=MS.gene20233
chr7.2 mRNA 11584148 11586809 11584148 ID=MS.gene20233.t1;Parent=MS.gene20233
chr7.2 exon 11586340 11586809 11586340 ID=MS.gene20233.t1.exon1;Parent=MS.gene20233.t1
chr7.2 CDS 11586340 11586809 11586340 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11586202 11586227 11586202 ID=MS.gene20233.t1.exon2;Parent=MS.gene20233.t1
chr7.2 CDS 11586202 11586227 11586202 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11586057 11586087 11586057 ID=MS.gene20233.t1.exon3;Parent=MS.gene20233.t1
chr7.2 CDS 11586057 11586087 11586057 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11585867 11585954 11585867 ID=MS.gene20233.t1.exon4;Parent=MS.gene20233.t1
chr7.2 CDS 11585867 11585954 11585867 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11585533 11585678 11585533 ID=MS.gene20233.t1.exon5;Parent=MS.gene20233.t1
chr7.2 CDS 11585533 11585678 11585533 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11585347 11585391 11585347 ID=MS.gene20233.t1.exon6;Parent=MS.gene20233.t1
chr7.2 CDS 11585347 11585391 11585347 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11585108 11585211 11585108 ID=MS.gene20233.t1.exon7;Parent=MS.gene20233.t1
chr7.2 CDS 11585108 11585211 11585108 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11584765 11584907 11584765 ID=MS.gene20233.t1.exon8;Parent=MS.gene20233.t1
chr7.2 CDS 11584765 11584907 11584765 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11584525 11584638 11584525 ID=MS.gene20233.t1.exon9;Parent=MS.gene20233.t1
chr7.2 CDS 11584525 11584638 11584525 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
chr7.2 exon 11584148 11584396 11584148 ID=MS.gene20233.t1.exon10;Parent=MS.gene20233.t1
chr7.2 CDS 11584148 11584396 11584148 ID=cds.MS.gene20233.t1;Parent=MS.gene20233.t1
Gene Sequence

>MS.gene20233

ATGTTGGATCTCAATCTCAACGCTGATTCCTCTCTTCCACTCTCCTCCGTCGTTCAGATGGAAGATTCATCCGGTAGCTTTGATTCCTCCGTCGTCAACGCTGCCGACACTGAAGATTCATGCTCTTACGGCGATGCATACGGTTACAACTTCGCCATACTCAACAACAACGCTTCCGTCGACAACGGTACTATCTCCGGTGAGCTTCAACACTCCGGCGCCGGCGAAGCTGTTGTACGGACAATTCAGCTTTTTCCAGCAAACGAATCGGGAATGATCTCGCCTTCTGAGAGTAGAGGATGGATGAATTTCTCGTCCGATCATCACGGTGGCGTACCGGAGCAGACTGTTGTTGTTGCTCCACGACCTCAGCCGGTGAAGAAGAGTCGTCGGGGACCGAGGTCACGAAGCTCGCAGTATCGTGGTGTTACTTTCTACCGGAGAACTGGACGTTGGGAATCGCATATTTGGTTAGCATTTCGCAATGGATCATTCTGTTTCTTCGTAGTTCAGTTCATTCAGTTTAGTTTTCACTTTCTGCATTTTTGTTTCTGAATCCACTCTGTTTTCGTTTTTCTGTAGGGATTGTGGAAAACAAGTATACTTAGGTGAGAAATCAACACTGATTAAGTGATTATTTGAGACGATTTCGTTGTTTTATTTTACGTTCTTGATCGTTCTTCCTTTTTTTAGATTTTGATCTTTGAAATTTAATTTTTCAGGTGGATTTGATACCGCGCATGCTGCGGCAAGGTAATTTTCATATTTGAATATTTTTTATATATTAATTATTTTTTTAAATATTGAATGTTTTTCATGGATTTATTTTTGTTTTTTTGTATGATTTATTTTCAGAGCATATGATCGAGCTGCGATAAAGTTTCGTGGCGTCGATGCGGATATTAATTTCAATGTCAGTGATTATGATGAAGATATAAAGCAGGTTTGTGAGAATTTGTTATTACTAATGTTGTGTTGATCTTGTTTAAAATCTGATTGTAAGTTAGTATAATTGTAGCTTTAACTTTGATTCTATTGAAGTGTAGATGAGTAATTTTTGAGATGATCTATTTTAAAATTTGAATGTTAAGTTCTAATTGTAGCATAAACTTTGATTTTATTGTTGTGTAGATGAATAACTTTACAAAGGAAGAGTTTGTGCATATTCTGCGTAGACAGAGTACTGGTTTCTCAAGGGGAAGTTCTAAATACAGAGGAGTTACTCTGCATAAATGTGGACGATGGGAAGCTCGTATGGGACAGTTTCTTGGGAAGAAGTAAGAAAATCCTTTAGTTTAATTTGATTTATTAGTTGAACCTAAAATGACTGATTTGTGATTTATTTAACCATAAACCAGTATTTAGTTCTTAATTATATTGGTCTGGGTTGTTAATTATATTGGTCTGGGTTTATGTAGGTATATATATCTTGGGCTTTTTGATAGCGAGCTAGATGCTGCAAGGTTTTAATTTATCAATCATATATAGCAGGATATCTCAAATGAAATGCCTAATTAAATATTTTGGATCATTTCACTTTTATATTTTCTTTTCTACATGTTGTGTTATTGACTTGGTTGCTCTATTGATGATTACAGAGCGTATGATAAGGCTGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAATTTTGAGGCTAGTTCTTATGAAGGAGAGTTAACTTCCCAGGCTGATAACGATGGTACTACTTATTGACCATTGAGGCTCACCTTTTTTTTGGTTTTATAATCAAATTGAATAAAACATCAATTTAGTCCATATAAACTATCACTCACTCTCTAATTTAGTCAGTCCTTAAAGTATGTCAATTAACCTTTACTATTAAGACTGGTGATTTAACTATGACGTGAAATGCAATGATGTATTTTGTGCTTTATTCAGATATCAAGCAGAATCTTGATCTGAACTTGGGTATAGCTCCTCCTTCTAACTCTGATGTTCAAATGATGAACATGCACCACAGTGGAAGTGGTTTGCAAGTTCAGCGTAACTGGGATGATATGCCTGTTGATAAGAGTGTAATGGTAAGGTCAAAAAAAAAAAAATTTTTTATATTAATTCTGCAATTCCTCATGCCCCTCTGCTCTTTCACATGAATTCAAAGTTTGCATACTTAACTTGCATCATATATTTTTAATCTGCGTTGATAGTTTGAGGACTCTGGGTCAAGATCACTCAATGTTCAGTCATCTTATGGCTTTCCCATAGCATCTGAGCATCAACCTCCAATCTGGAGTGGTACTAATTACTTTCCCGTGTGTAAGGTGAATACTAATTTTGCTTTAGTATCTTCTGCTAGTTATGAATTATCACTGTTCAATTTGATTTTGCTTCAATATCTTAAGAATCTTCTGCTGGTTATGAATTATGATTATTTGTGTTCTATTTACAGGAAAGAGCAATAGAGAATAGGATGGAATCTGCTCCCGTTCCAAATTGGGCATGGCAGCTCCAAAGTCCATATAATAATGGGTCAACTTTGATTCCACCTAATTTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACAACAGCTGCGGATAGTCAGATTCATTTTCCAAACATAACATACCTCCACCCTCATTTTCCTACTCCAGCGACTAACTCCAGCCCCATACCCTCTTTCTACTGCAGGAGCTGA
Protein sequence

>MS.gene20233.t1

MLDLNLNADSSLPLSSVVQMEDSSGSFDSSVVNAADTEDSCSYGDAYGYNFAILNNNASVDNGTISGELQHSGAGEAVVRTIQLFPANESGMISPSESRGWMNFSSDHHGGVPEQTVVVAPRPQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMNNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELDAARAYDKAAIKCNGREAVTNFEASSYEGELTSQADNDDIKQNLDLNLGIAPPSNSDVQMMNMHHSGSGLQVQRNWDDMPVDKSVMFEDSGSRSLNVQSSYGFPIASEHQPPIWSGTNYFPVCKERAIENRMESAPVPNWAWQLQSPYNNGSTLIPPNFSAAASSGFPSTTAADSQIHFPNITYLHPHFPTPATNSSPIPSFYCRS