Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059421.t1 | XP_013452175.1 | 95.4 | 219 | 10 | 0 | 1 | 219 | 215 | 433 | 2.70E-111 | 411.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059421.t1 | F4JH46 | 52.8 | 218 | 103 | 0 | 2 | 219 | 273 | 490 | 1.8e-63 | 243.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059421.t1 | A0A072UAS2 | 95.4 | 219 | 10 | 0 | 1 | 219 | 215 | 433 | 1.9e-111 | 411.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene059421 | 0.81052 | 1.11E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene059421 | 0.814991 | 1.16E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene059421 | 0.81648 | 5.41E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene059421 | 0.811363 | 7.27E-51 | -1.69E-46 |
| MS.gene049915 | MS.gene059421 | 0.835042 | 2.11E-56 | -1.69E-46 |
| MS.gene050398 | MS.gene059421 | 0.806744 | 7.09E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene059421 | 0.806863 | 6.69E-50 | -1.69E-46 |
| MS.gene052255 | MS.gene059421 | 0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene053074 | MS.gene059421 | 0.832712 | 8.08E-56 | -1.69E-46 |
| MS.gene054184 | MS.gene059421 | 0.910009 | 3.02E-82 | -1.69E-46 |
| MS.gene054185 | MS.gene059421 | 0.90214 | 1.31E-78 | -1.69E-46 |
| MS.gene054542 | MS.gene059421 | 0.806809 | 6.87E-50 | -1.69E-46 |
| MS.gene055133 | MS.gene059421 | 0.806372 | 8.49E-50 | -1.69E-46 |
| MS.gene057750 | MS.gene059421 | 0.802977 | 4.34E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene059421 | 0.833148 | 6.30E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene059421 | 0.802951 | 4.40E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene059421 | 0.810138 | 1.34E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene059421 | 0.804553 | 2.04E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene059421 | 0.83166 | 1.47E-55 | -1.69E-46 |
| MS.gene059421 | MS.gene05984 | 0.803629 | 3.18E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene061049 | 0.809068 | 2.27E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene06138 | 0.813028 | 3.15E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene062226 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene062354 | 0.806464 | 8.12E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene062429 | 0.812317 | 4.51E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene063503 | 0.805319 | 1.41E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene063876 | 0.80317 | 3.96E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene06465 | 0.817552 | 3.11E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene066337 | 0.822118 | 2.81E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene066856 | 0.813598 | 2.36E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene066865 | 0.87223 | 3.73E-67 | -1.69E-46 |
| MS.gene059421 | MS.gene066866 | 0.87123 | 8.01E-67 | -1.69E-46 |
| MS.gene059421 | MS.gene066868 | 0.870372 | 1.53E-66 | -1.69E-46 |
| MS.gene059421 | MS.gene070491 | 0.816026 | 6.84E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene071062 | 0.806543 | 7.82E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene071407 | 0.804198 | 2.42E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene07263 | 0.834078 | 3.69E-56 | -1.69E-46 |
| MS.gene059421 | MS.gene072897 | 0.82112 | 4.78E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene073340 | -0.812418 | 4.28E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene07942 | 0.82809 | 1.09E-54 | -1.69E-46 |
| MS.gene059421 | MS.gene07948 | 0.824966 | 6.06E-54 | -1.69E-46 |
| MS.gene059421 | MS.gene08514 | 0.811679 | 6.21E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene20029 | 0.81411 | 1.82E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene20030 | 0.813739 | 2.20E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene20233 | 0.817557 | 3.10E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene20556 | 0.833333 | 5.66E-56 | -1.69E-46 |
| MS.gene059421 | MS.gene20784 | 0.835574 | 1.55E-56 | -1.69E-46 |
| MS.gene059421 | MS.gene20835 | 0.838565 | 2.67E-57 | -1.69E-46 |
| MS.gene059421 | MS.gene22133 | 0.80606 | 9.88E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene23318 | 0.817601 | 3.03E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene23912 | 0.804385 | 2.22E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene23915 | 0.804605 | 1.99E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene25859 | 0.819942 | 8.91E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene25868 | 0.850534 | 1.60E-60 | -1.69E-46 |
| MS.gene059421 | MS.gene28693 | 0.810574 | 1.08E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene29146 | 0.804725 | 1.88E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene30689 | 0.815007 | 1.15E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene31519 | 0.801796 | 7.60E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene31604 | 0.827253 | 1.73E-54 | -1.69E-46 |
| MS.gene059421 | MS.gene31609 | 0.843675 | 1.21E-58 | -1.69E-46 |
| MS.gene059421 | MS.gene31671 | 0.814904 | 1.22E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene32626 | 0.817005 | 4.13E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene33198 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene33248 | 0.817986 | 2.48E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene35391 | 0.80973 | 1.64E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene35428 | 0.810899 | 9.16E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene35721 | 0.802189 | 6.31E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene36374 | 0.806478 | 8.07E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene37634 | 0.80063 | 1.32E-48 | -1.69E-46 |
| MS.gene059421 | MS.gene38528 | 0.845816 | 3.21E-59 | -1.69E-46 |
| MS.gene059421 | MS.gene38680 | 0.803992 | 2.68E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene38772 | 0.845126 | 4.93E-59 | -1.69E-46 |
| MS.gene059421 | MS.gene39496 | 0.838196 | 3.32E-57 | -1.69E-46 |
| MS.gene059421 | MS.gene39805 | 0.813922 | 2.00E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene40169 | 0.823528 | 1.32E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene41583 | 0.805912 | 1.06E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene41915 | 0.905393 | 4.50E-80 | -1.69E-46 |
| MS.gene059421 | MS.gene43800 | 0.803725 | 3.04E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene45085 | 0.815303 | 9.90E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene45403 | 0.826472 | 2.66E-54 | -1.69E-46 |
| MS.gene059421 | MS.gene45771 | 0.802233 | 6.18E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene47283 | 0.812712 | 3.69E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene49771 | 0.823181 | 1.59E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene49839 | 0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene50575 | 0.813209 | 2.87E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene50644 | 0.806029 | 1.00E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene50651 | 0.830374 | 3.04E-55 | -1.69E-46 |
| MS.gene059421 | MS.gene51067 | 0.814334 | 1.62E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene52399 | 0.827292 | 1.70E-54 | -1.69E-46 |
| MS.gene059421 | MS.gene54020 | 0.835517 | 1.60E-56 | -1.69E-46 |
| MS.gene059421 | MS.gene54138 | 0.809112 | 2.22E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene55219 | -0.836298 | 1.02E-56 | -1.69E-46 |
| MS.gene059421 | MS.gene56053 | 0.810662 | 1.03E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene56057 | 0.851367 | 9.29E-61 | -1.69E-46 |
| MS.gene059421 | MS.gene56488 | 0.804252 | 2.36E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene57565 | 0.805399 | 1.36E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene57945 | 0.80089 | 1.17E-48 | -1.69E-46 |
| MS.gene059421 | MS.gene58270 | 0.807997 | 3.85E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene59876 | 0.800973 | 1.12E-48 | -1.69E-46 |
| MS.gene059421 | MS.gene60737 | 0.802683 | 4.99E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene61507 | 0.802193 | 6.30E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene62594 | 0.807082 | 6.01E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene62645 | 0.804394 | 2.21E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene62720 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene64994 | 0.816504 | 5.34E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene67002 | 0.807413 | 5.12E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene67058 | 0.816889 | 4.38E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene67384 | 0.811863 | 5.66E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene68168 | 0.807603 | 4.66E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene68393 | 0.812676 | 3.76E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene68764 | 0.810159 | 1.32E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene68819 | 0.829922 | 3.92E-55 | -1.69E-46 |
| MS.gene059421 | MS.gene68907 | 0.818832 | 1.60E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene68923 | 0.8113 | 7.50E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene69260 | 0.803001 | 4.29E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene69575 | 0.804208 | 2.41E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene70113 | 0.805702 | 1.18E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene71604 | 0.802166 | 6.38E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene73257 | 0.801813 | 7.54E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene73745 | 0.817288 | 3.56E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene74587 | 0.833653 | 4.71E-56 | -1.69E-46 |
| MS.gene059421 | MS.gene74723 | 0.822967 | 1.78E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene75321 | 0.829635 | 4.61E-55 | -1.69E-46 |
| MS.gene059421 | MS.gene75678 | 0.807744 | 4.35E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene77301 | 0.807818 | 4.20E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene79290 | 0.819888 | 9.17E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene80025 | 0.860979 | 1.42E-63 | -1.69E-46 |
| MS.gene059421 | MS.gene82810 | 0.814983 | 1.17E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene85898 | 0.805245 | 1.47E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene86114 | 0.812461 | 4.19E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene87987 | 0.819654 | 1.04E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene88788 | 0.820723 | 5.90E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene89630 | 0.804132 | 2.50E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene90151 | 0.80004 | 1.74E-48 | -1.69E-46 |
| MS.gene059421 | MS.gene91581 | 0.800849 | 1.19E-48 | -1.69E-46 |
| MS.gene059421 | MS.gene91845 | 0.807768 | 4.30E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene95864 | 0.812623 | 3.86E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene95993 | 0.814034 | 1.89E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene96276 | 0.811098 | 8.30E-51 | -1.69E-46 |
| MS.gene059421 | MS.gene96371 | 0.803786 | 2.95E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene96705 | 0.806588 | 7.65E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene99375 | 0.832981 | 6.93E-56 | -1.69E-46 |
| MS.gene059421 | MS.gene99551 | 0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene059421 | MS.gene99806 | 0.806911 | 6.54E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059421.t1 | MTR_6g047590 | 95.434 | 219 | 10 | 0 | 1 | 219 | 215 | 433 | 4.27e-147 | 418 |
| MS.gene059421.t1 | MTR_6g047610 | 84.932 | 219 | 33 | 0 | 1 | 219 | 215 | 433 | 8.55e-131 | 377 |
| MS.gene059421.t1 | MTR_6g047640 | 85.845 | 219 | 31 | 0 | 1 | 219 | 216 | 434 | 1.17e-126 | 367 |
| MS.gene059421.t1 | MTR_6g047640 | 78.995 | 219 | 27 | 1 | 1 | 219 | 216 | 415 | 1.23e-117 | 343 |
| MS.gene059421.t1 | MTR_1g100180 | 50.685 | 219 | 108 | 0 | 1 | 219 | 228 | 446 | 4.71e-72 | 227 |
| MS.gene059421.t1 | MTR_8g069470 | 39.815 | 216 | 129 | 1 | 4 | 218 | 238 | 453 | 8.58e-53 | 177 |
| MS.gene059421.t1 | MTR_1g021740 | 41.935 | 217 | 125 | 1 | 4 | 219 | 223 | 439 | 9.76e-53 | 177 |
| MS.gene059421.t1 | MTR_7g087410 | 42.723 | 213 | 121 | 1 | 8 | 219 | 134 | 346 | 1.80e-52 | 174 |
| MS.gene059421.t1 | MTR_7g087410 | 42.723 | 213 | 121 | 1 | 8 | 219 | 223 | 435 | 1.07e-51 | 174 |
| MS.gene059421.t1 | MTR_7g087430 | 40.376 | 213 | 126 | 1 | 8 | 219 | 134 | 346 | 5.00e-50 | 167 |
| MS.gene059421.t1 | MTR_5g033100 | 42.396 | 217 | 124 | 1 | 4 | 219 | 244 | 460 | 7.83e-50 | 169 |
| MS.gene059421.t1 | MTR_7g087400 | 38.679 | 212 | 130 | 0 | 8 | 219 | 222 | 433 | 4.60e-49 | 167 |
| MS.gene059421.t1 | MTR_5g090290 | 40.000 | 210 | 126 | 0 | 9 | 218 | 241 | 450 | 1.88e-48 | 167 |
| MS.gene059421.t1 | MTR_2g022980 | 37.850 | 214 | 131 | 1 | 8 | 219 | 240 | 453 | 4.65e-47 | 162 |
| MS.gene059421.t1 | MTR_7g087370 | 37.736 | 212 | 132 | 0 | 8 | 219 | 193 | 404 | 5.28e-47 | 161 |
| MS.gene059421.t1 | MTR_3g099700 | 37.727 | 220 | 136 | 1 | 1 | 219 | 231 | 450 | 1.14e-46 | 161 |
| MS.gene059421.t1 | MTR_2g088400 | 39.070 | 215 | 129 | 1 | 8 | 220 | 244 | 458 | 1.26e-46 | 160 |
| MS.gene059421.t1 | MTR_2g088400 | 39.252 | 214 | 128 | 1 | 8 | 219 | 244 | 457 | 3.66e-46 | 160 |
| MS.gene059421.t1 | MTR_8g063590 | 40.654 | 214 | 124 | 2 | 8 | 218 | 245 | 458 | 3.16e-45 | 157 |
| MS.gene059421.t1 | MTR_6g027200 | 39.691 | 194 | 117 | 0 | 8 | 201 | 229 | 422 | 3.38e-44 | 154 |
| MS.gene059421.t1 | MTR_4g048000 | 39.450 | 218 | 130 | 1 | 4 | 219 | 252 | 469 | 9.23e-44 | 153 |
| MS.gene059421.t1 | MTR_5g032720 | 38.785 | 214 | 128 | 2 | 4 | 214 | 224 | 437 | 4.70e-42 | 148 |
| MS.gene059421.t1 | MTR_5g032750 | 39.175 | 194 | 118 | 0 | 26 | 219 | 247 | 440 | 9.02e-40 | 142 |
| MS.gene059421.t1 | MTR_6g027190 | 37.736 | 212 | 132 | 0 | 8 | 219 | 217 | 428 | 9.76e-40 | 142 |
| MS.gene059421.t1 | MTR_5g087930 | 36.697 | 218 | 105 | 4 | 8 | 218 | 218 | 409 | 1.44e-38 | 139 |
| MS.gene059421.t1 | MTR_3g099720 | 34.450 | 209 | 136 | 1 | 4 | 211 | 229 | 437 | 6.58e-37 | 134 |
| MS.gene059421.t1 | MTR_2g079020 | 35.747 | 221 | 140 | 1 | 1 | 219 | 222 | 442 | 4.82e-35 | 130 |
| MS.gene059421.t1 | MTR_2g078930 | 35.294 | 221 | 141 | 1 | 1 | 219 | 228 | 448 | 2.71e-34 | 127 |
| MS.gene059421.t1 | MTR_2g078990 | 35.135 | 222 | 140 | 2 | 1 | 219 | 45 | 265 | 3.64e-33 | 122 |
| MS.gene059421.t1 | MTR_2g078970 | 35.135 | 222 | 140 | 2 | 1 | 219 | 216 | 436 | 1.03e-32 | 123 |
| MS.gene059421.t1 | MTR_8g106670 | 33.505 | 194 | 129 | 0 | 23 | 216 | 221 | 414 | 2.50e-32 | 122 |
| MS.gene059421.t1 | MTR_6g081410 | 31.839 | 223 | 148 | 2 | 1 | 219 | 210 | 432 | 4.09e-29 | 113 |
| MS.gene059421.t1 | MTR_1g108990 | 32.609 | 184 | 124 | 0 | 29 | 212 | 240 | 423 | 6.72e-29 | 112 |
| MS.gene059421.t1 | MTR_6g081780 | 31.390 | 223 | 149 | 2 | 1 | 219 | 210 | 432 | 6.90e-29 | 112 |
| MS.gene059421.t1 | MTR_6g081240 | 31.776 | 214 | 144 | 1 | 5 | 216 | 199 | 412 | 5.66e-28 | 110 |
| MS.gene059421.t1 | MTR_1g108840 | 32.796 | 186 | 125 | 0 | 34 | 219 | 261 | 446 | 1.91e-27 | 108 |
| MS.gene059421.t1 | MTR_6g081310 | 30.952 | 210 | 143 | 1 | 5 | 212 | 197 | 406 | 2.18e-27 | 108 |
| MS.gene059421.t1 | MTR_2g078960 | 34.389 | 221 | 143 | 1 | 1 | 219 | 218 | 438 | 3.23e-27 | 108 |
| MS.gene059421.t1 | MTR_6g066380 | 32.287 | 223 | 147 | 2 | 1 | 219 | 212 | 434 | 3.82e-27 | 108 |
| MS.gene059421.t1 | MTR_2g079030 | 35.928 | 167 | 107 | 0 | 53 | 219 | 319 | 485 | 6.11e-27 | 107 |
| MS.gene059421.t1 | MTR_6g081400 | 28.959 | 221 | 155 | 1 | 1 | 219 | 201 | 421 | 1.28e-25 | 103 |
| MS.gene059421.t1 | MTR_6g081300 | 29.439 | 214 | 149 | 1 | 5 | 216 | 199 | 412 | 1.80e-25 | 103 |
| MS.gene059421.t1 | MTR_1g108810 | 29.680 | 219 | 152 | 1 | 1 | 217 | 219 | 437 | 4.14e-24 | 99.8 |
| MS.gene059421.t1 | MTR_7g082810 | 28.947 | 190 | 135 | 0 | 30 | 219 | 236 | 425 | 1.25e-23 | 98.2 |
| MS.gene059421.t1 | MTR_6g081390 | 28.054 | 221 | 157 | 1 | 1 | 219 | 198 | 418 | 1.71e-23 | 97.8 |
| MS.gene059421.t1 | MTR_1g109060 | 32.632 | 190 | 128 | 0 | 23 | 212 | 233 | 422 | 3.62e-23 | 97.1 |
| MS.gene059421.t1 | MTR_1g109060 | 32.632 | 190 | 128 | 0 | 23 | 212 | 233 | 422 | 3.90e-23 | 97.1 |
| MS.gene059421.t1 | MTR_5g090280 | 30.806 | 211 | 112 | 3 | 23 | 206 | 151 | 354 | 3.07e-22 | 94.0 |
| MS.gene059421.t1 | MTR_6g081810 | 31.214 | 173 | 119 | 0 | 47 | 219 | 234 | 406 | 1.34e-20 | 89.7 |
| MS.gene059421.t1 | MTR_6g004220 | 27.749 | 191 | 138 | 0 | 29 | 219 | 239 | 429 | 3.64e-19 | 85.5 |
| MS.gene059421.t1 | MTR_6g004220 | 27.749 | 191 | 138 | 0 | 29 | 219 | 246 | 436 | 3.76e-19 | 85.5 |
| MS.gene059421.t1 | MTR_1g101500 | 27.723 | 202 | 144 | 1 | 13 | 212 | 261 | 462 | 5.90e-19 | 85.1 |
| MS.gene059421.t1 | MTR_0039s0080 | 26.238 | 202 | 149 | 0 | 11 | 212 | 235 | 436 | 8.77e-19 | 84.7 |
| MS.gene059421.t1 | MTR_7g082800 | 27.320 | 194 | 136 | 1 | 26 | 219 | 159 | 347 | 9.56e-19 | 84.0 |
| MS.gene059421.t1 | MTR_5g010830 | 26.961 | 204 | 149 | 0 | 9 | 212 | 260 | 463 | 1.46e-17 | 80.9 |
| MS.gene059421.t1 | MTR_6g043810 | 26.705 | 176 | 129 | 0 | 37 | 212 | 264 | 439 | 1.64e-14 | 72.0 |
| MS.gene059421.t1 | MTR_6g043810 | 26.705 | 176 | 129 | 0 | 37 | 212 | 254 | 429 | 1.66e-14 | 72.0 |
| MS.gene059421.t1 | MTR_3g111020 | 28.000 | 175 | 126 | 0 | 43 | 217 | 280 | 454 | 5.68e-14 | 70.5 |
| MS.gene059421.t1 | MTR_5g067460 | 28.070 | 171 | 115 | 2 | 51 | 217 | 292 | 458 | 1.30e-13 | 69.7 |
| MS.gene059421.t1 | MTR_2g435930 | 26.786 | 168 | 123 | 0 | 51 | 218 | 272 | 439 | 8.94e-13 | 67.0 |
| MS.gene059421.t1 | MTR_6g088805 | 25.926 | 189 | 136 | 2 | 26 | 212 | 236 | 422 | 9.06e-12 | 63.9 |
| MS.gene059421.t1 | MTR_4g027920 | 21.759 | 216 | 165 | 2 | 1 | 212 | 341 | 556 | 9.75e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059421.t1 | AT4G00350 | 52.752 | 218 | 103 | 0 | 2 | 219 | 273 | 490 | 2.32e-79 | 247 |
| MS.gene059421.t1 | AT4G25640 | 54.587 | 218 | 99 | 0 | 1 | 218 | 218 | 435 | 1.62e-71 | 225 |
| MS.gene059421.t1 | AT4G25640 | 54.587 | 218 | 99 | 0 | 1 | 218 | 218 | 435 | 4.30e-71 | 224 |
| MS.gene059421.t1 | AT4G25640 | 54.587 | 218 | 99 | 0 | 1 | 218 | 218 | 435 | 9.91e-71 | 224 |
| MS.gene059421.t1 | AT3G26590 | 42.326 | 215 | 122 | 2 | 6 | 218 | 131 | 345 | 1.50e-56 | 184 |
| MS.gene059421.t1 | AT3G26590 | 42.326 | 215 | 122 | 2 | 6 | 218 | 233 | 447 | 7.47e-56 | 185 |
| MS.gene059421.t1 | AT1G47530 | 41.935 | 217 | 125 | 1 | 4 | 219 | 130 | 346 | 4.50e-54 | 178 |
| MS.gene059421.t1 | AT1G23300 | 39.631 | 217 | 130 | 1 | 4 | 219 | 231 | 447 | 4.93e-54 | 181 |
| MS.gene059421.t1 | AT1G47530 | 41.935 | 217 | 125 | 1 | 4 | 219 | 222 | 438 | 1.98e-53 | 178 |
| MS.gene059421.t1 | AT5G38030 | 39.352 | 216 | 130 | 1 | 4 | 218 | 232 | 447 | 3.74e-53 | 178 |
| MS.gene059421.t1 | AT1G12950 | 38.889 | 216 | 131 | 1 | 4 | 218 | 254 | 469 | 4.93e-53 | 178 |
| MS.gene059421.t1 | AT1G11670 | 40.826 | 218 | 127 | 1 | 4 | 219 | 237 | 454 | 5.08e-50 | 170 |
| MS.gene059421.t1 | AT1G61890 | 39.070 | 215 | 129 | 1 | 8 | 220 | 238 | 452 | 6.23e-50 | 169 |
| MS.gene059421.t1 | AT1G61890 | 39.252 | 214 | 128 | 1 | 8 | 219 | 238 | 451 | 9.91e-50 | 169 |
| MS.gene059421.t1 | AT1G61890 | 39.252 | 214 | 128 | 1 | 8 | 219 | 238 | 451 | 1.11e-49 | 169 |
| MS.gene059421.t1 | AT1G33110 | 41.315 | 213 | 124 | 1 | 8 | 219 | 227 | 439 | 1.88e-48 | 166 |
| MS.gene059421.t1 | AT4G21903 | 39.450 | 218 | 130 | 1 | 4 | 219 | 130 | 347 | 2.86e-48 | 163 |
| MS.gene059421.t1 | AT3G21690 | 38.991 | 218 | 131 | 1 | 4 | 219 | 239 | 456 | 9.35e-48 | 164 |
| MS.gene059421.t1 | AT1G33100 | 40.741 | 216 | 127 | 1 | 5 | 219 | 221 | 436 | 1.65e-47 | 163 |
| MS.gene059421.t1 | AT4G21903 | 39.450 | 218 | 130 | 1 | 4 | 219 | 239 | 456 | 2.09e-47 | 163 |
| MS.gene059421.t1 | AT4G21903 | 39.450 | 218 | 130 | 1 | 4 | 219 | 239 | 456 | 2.91e-47 | 163 |
| MS.gene059421.t1 | AT1G33090 | 39.906 | 213 | 127 | 1 | 8 | 219 | 227 | 439 | 1.78e-45 | 157 |
| MS.gene059421.t1 | AT4G21910 | 39.086 | 197 | 120 | 0 | 23 | 219 | 262 | 458 | 4.29e-45 | 157 |
| MS.gene059421.t1 | AT4G21910 | 39.086 | 197 | 120 | 0 | 23 | 219 | 262 | 458 | 4.29e-45 | 157 |
| MS.gene059421.t1 | AT4G21910 | 39.086 | 197 | 120 | 0 | 23 | 219 | 264 | 460 | 5.99e-45 | 156 |
| MS.gene059421.t1 | AT4G21910 | 39.086 | 197 | 120 | 0 | 23 | 219 | 264 | 460 | 5.99e-45 | 156 |
| MS.gene059421.t1 | AT1G33080 | 39.269 | 219 | 132 | 1 | 2 | 219 | 221 | 439 | 1.02e-44 | 155 |
| MS.gene059421.t1 | AT1G33080 | 39.269 | 219 | 132 | 1 | 2 | 219 | 221 | 439 | 1.47e-44 | 155 |
| MS.gene059421.t1 | AT5G65380 | 39.815 | 216 | 129 | 1 | 4 | 218 | 224 | 439 | 1.13e-43 | 153 |
| MS.gene059421.t1 | AT3G59030 | 39.286 | 196 | 119 | 0 | 23 | 218 | 259 | 454 | 6.16e-43 | 151 |
| MS.gene059421.t1 | AT5G10420 | 39.691 | 194 | 117 | 0 | 26 | 219 | 248 | 441 | 5.35e-40 | 143 |
| MS.gene059421.t1 | AT5G44050 | 36.530 | 219 | 138 | 1 | 2 | 219 | 225 | 443 | 3.98e-36 | 132 |
| MS.gene059421.t1 | AT3G03620 | 34.562 | 217 | 141 | 1 | 4 | 219 | 224 | 440 | 1.63e-34 | 128 |
| MS.gene059421.t1 | AT3G03620 | 34.562 | 217 | 141 | 1 | 4 | 219 | 224 | 440 | 1.63e-34 | 128 |
| MS.gene059421.t1 | AT3G23560 | 34.842 | 221 | 142 | 1 | 1 | 219 | 223 | 443 | 3.99e-33 | 124 |
| MS.gene059421.t1 | AT1G33110 | 37.853 | 177 | 109 | 1 | 8 | 183 | 227 | 403 | 8.79e-33 | 122 |
| MS.gene059421.t1 | AT5G17700 | 34.101 | 217 | 142 | 1 | 4 | 219 | 221 | 437 | 4.26e-32 | 122 |
| MS.gene059421.t1 | AT5G17700 | 34.101 | 217 | 142 | 1 | 4 | 219 | 221 | 437 | 4.26e-32 | 122 |
| MS.gene059421.t1 | AT3G23550 | 33.484 | 221 | 145 | 1 | 1 | 219 | 215 | 435 | 7.23e-32 | 120 |
| MS.gene059421.t1 | AT1G15170 | 32.110 | 218 | 146 | 1 | 1 | 216 | 99 | 316 | 7.79e-27 | 105 |
| MS.gene059421.t1 | AT1G15170 | 32.110 | 218 | 146 | 1 | 1 | 216 | 218 | 435 | 2.13e-26 | 106 |
| MS.gene059421.t1 | AT3G59030 | 33.750 | 160 | 106 | 0 | 23 | 182 | 259 | 418 | 7.72e-26 | 103 |
| MS.gene059421.t1 | AT1G15160 | 31.193 | 218 | 148 | 1 | 1 | 216 | 215 | 432 | 8.34e-26 | 104 |
| MS.gene059421.t1 | AT5G52450 | 31.818 | 220 | 146 | 2 | 1 | 217 | 210 | 428 | 1.28e-25 | 103 |
| MS.gene059421.t1 | AT1G15150 | 30.734 | 218 | 149 | 1 | 1 | 216 | 99 | 316 | 1.89e-25 | 102 |
| MS.gene059421.t1 | AT1G15150 | 30.734 | 218 | 149 | 1 | 1 | 216 | 215 | 432 | 3.71e-25 | 102 |
| MS.gene059421.t1 | AT1G15180 | 32.990 | 194 | 130 | 0 | 23 | 216 | 243 | 436 | 5.69e-25 | 102 |
| MS.gene059421.t1 | AT2G04040 | 28.959 | 221 | 155 | 2 | 1 | 219 | 211 | 431 | 7.05e-25 | 101 |
| MS.gene059421.t1 | AT2G04080 | 30.769 | 169 | 117 | 0 | 47 | 215 | 259 | 427 | 7.78e-25 | 101 |
| MS.gene059421.t1 | AT2G04080 | 30.769 | 169 | 117 | 0 | 47 | 215 | 259 | 427 | 9.29e-25 | 101 |
| MS.gene059421.t1 | AT2G34360 | 31.222 | 221 | 140 | 5 | 1 | 217 | 211 | 423 | 2.80e-23 | 97.4 |
| MS.gene059421.t1 | AT2G04070 | 28.959 | 221 | 155 | 1 | 1 | 219 | 211 | 431 | 3.19e-23 | 97.1 |
| MS.gene059421.t1 | AT1G73700 | 31.507 | 219 | 148 | 1 | 1 | 217 | 208 | 426 | 1.67e-22 | 95.1 |
| MS.gene059421.t1 | AT2G04050 | 29.834 | 181 | 127 | 0 | 39 | 219 | 251 | 431 | 2.11e-22 | 94.7 |
| MS.gene059421.t1 | AT1G71140 | 29.050 | 179 | 127 | 0 | 34 | 212 | 245 | 423 | 5.32e-22 | 93.6 |
| MS.gene059421.t1 | AT5G17700 | 31.461 | 178 | 121 | 1 | 4 | 180 | 221 | 398 | 1.94e-20 | 89.0 |
| MS.gene059421.t1 | AT2G04100 | 29.560 | 159 | 112 | 0 | 61 | 219 | 276 | 434 | 2.80e-19 | 85.9 |
| MS.gene059421.t1 | AT2G04100 | 29.560 | 159 | 112 | 0 | 61 | 219 | 276 | 434 | 2.85e-19 | 85.9 |
| MS.gene059421.t1 | AT2G04090 | 28.931 | 159 | 113 | 0 | 61 | 219 | 276 | 434 | 5.42e-19 | 85.1 |
| MS.gene059421.t1 | AT1G66760 | 28.736 | 174 | 123 | 1 | 47 | 219 | 131 | 304 | 1.10e-18 | 83.2 |
| MS.gene059421.t1 | AT1G66780 | 26.289 | 194 | 135 | 2 | 23 | 212 | 243 | 432 | 1.43e-18 | 84.0 |
| MS.gene059421.t1 | AT1G66760 | 28.902 | 173 | 122 | 1 | 48 | 219 | 260 | 432 | 1.77e-18 | 83.6 |
| MS.gene059421.t1 | AT1G66760 | 28.902 | 173 | 122 | 1 | 48 | 219 | 260 | 432 | 2.07e-18 | 83.6 |
| MS.gene059421.t1 | AT3G23560 | 31.319 | 182 | 123 | 1 | 1 | 180 | 223 | 404 | 2.77e-18 | 82.8 |
| MS.gene059421.t1 | AT1G64820 | 27.027 | 185 | 127 | 2 | 39 | 219 | 253 | 433 | 3.14e-16 | 77.0 |
| MS.gene059421.t1 | AT2G34360 | 31.034 | 116 | 80 | 0 | 102 | 217 | 266 | 381 | 3.16e-15 | 74.3 |
| MS.gene059421.t1 | AT4G23030 | 26.866 | 201 | 145 | 1 | 14 | 212 | 230 | 430 | 2.61e-14 | 71.6 |
| MS.gene059421.t1 | AT1G58340 | 28.313 | 166 | 111 | 2 | 51 | 212 | 294 | 455 | 4.13e-14 | 70.9 |
| MS.gene059421.t1 | AT2G38510 | 23.858 | 197 | 149 | 1 | 24 | 219 | 215 | 411 | 9.77e-14 | 69.7 |
| MS.gene059421.t1 | AT4G29140 | 26.977 | 215 | 153 | 3 | 1 | 212 | 240 | 453 | 2.16e-13 | 68.9 |
| MS.gene059421.t1 | AT1G15180 | 29.299 | 157 | 111 | 0 | 24 | 180 | 124 | 280 | 6.22e-13 | 67.4 |
| MS.gene059421.t1 | AT1G71870 | 23.457 | 162 | 124 | 0 | 51 | 212 | 277 | 438 | 9.83e-12 | 63.9 |
| MS.gene059421.t1 | AT5G19700 | 26.540 | 211 | 154 | 1 | 2 | 212 | 224 | 433 | 1.62e-11 | 63.5 |
| MS.gene059421.t1 | AT2G04066 | 25.000 | 92 | 69 | 0 | 124 | 215 | 31 | 122 | 5.01e-11 | 59.7 |
Find 53 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTTCAACCAGCATTT+AGG | 0.132024 | 6.3:-41888792 | MS.gene059421:CDS |
| GATTGTCTTGGATGGCATTT+AGG | 0.156838 | 6.3:-41890705 | MS.gene059421:CDS |
| TTGGCATGTTATTACATTAT+TGG | 0.167145 | 6.3:-41888834 | MS.gene059421:CDS |
| GGATGGCATTTAGGGAATTA+TGG | 0.195593 | 6.3:-41890696 | MS.gene059421:CDS |
| CTCTTGGTTCATATTCAATT+TGG | 0.200378 | 6.3:-41890567 | MS.gene059421:intron |
| TGCCACCAAGAATGAGTATT+TGG | 0.240486 | 6.3:+41889189 | None:intergenic |
| TGGAACTCCATGTTGCTTCT+TGG | 0.241081 | 6.3:-41890222 | MS.gene059421:CDS |
| CAATCCATTCCATCCTTCTT+TGG | 0.248321 | 6.3:+41890723 | None:intergenic |
| AGTGAATTAGCATACTTTCT+TGG | 0.258952 | 6.3:-41889058 | MS.gene059421:CDS |
| GTTTGCATTATTCTTCTTGC+TGG | 0.304171 | 6.3:-41890613 | MS.gene059421:CDS |
| AAACCAAGGTAAATTGCAAT+TGG | 0.330518 | 6.3:+41888807 | None:intergenic |
| GATGGCATTTAGGGAATTAT+GGG | 0.335429 | 6.3:-41890695 | MS.gene059421:CDS |
| TTGGAGTAAGTACAGCATTA+AGG | 0.340973 | 6.3:-41890203 | MS.gene059421:intron |
| ATTGTCTTGGATGGCATTTA+GGG | 0.356470 | 6.3:-41890704 | MS.gene059421:CDS |
| TTGGTTTCAACCAGCATTTA+GGG | 0.362095 | 6.3:-41888791 | MS.gene059421:CDS |
| ATGTATCATATCTACACTTT+TGG | 0.370229 | 6.3:+41889087 | None:intergenic |
| AGCATCCAAATACTCATTCT+TGG | 0.385529 | 6.3:-41889194 | MS.gene059421:CDS |
| ATACTAAGTCTTGGTTCATC+TGG | 0.400487 | 6.3:-41890664 | MS.gene059421:CDS |
| GATAATCCTGTGATTGCTCT+TGG | 0.400996 | 6.3:-41890583 | MS.gene059421:CDS |
| GCATTGGTAATTTATGTCAT+TGG | 0.414069 | 6.3:-41890751 | MS.gene059421:CDS |
| ATAGGTGTGGTCATTGGATG+TGG | 0.436144 | 6.3:-41888885 | MS.gene059421:intron |
| AGTGTTTCACAAACTATATC+AGG | 0.454438 | 6.3:-41889016 | MS.gene059421:intron |
| AATGAGTATTTGGATGCTCT+TGG | 0.457837 | 6.3:+41889199 | None:intergenic |
| TTGGTTCATCTGGAATGATC+TGG | 0.462048 | 6.3:-41890654 | MS.gene059421:CDS |
| GTCATTGGTTGGTCCAAAGA+AGG | 0.471708 | 6.3:-41890736 | MS.gene059421:CDS |
| ATGTCTCAGTCTCTTCTCAT+TGG | 0.479393 | 6.3:-41889166 | MS.gene059421:CDS |
| AACCAAGGTAAATTGCAATT+GGG | 0.485625 | 6.3:+41888808 | None:intergenic |
| TGGTAATTTATGTCATTGGT+TGG | 0.487806 | 6.3:-41890747 | MS.gene059421:CDS |
| TATGGTTGGTTACATAAACT+TGG | 0.494914 | 6.3:-41888853 | MS.gene059421:CDS |
| CTCCCAATTGCAATTTACCT+TGG | 0.495308 | 6.3:-41888810 | MS.gene059421:CDS |
| GAATTTACAATACTAAGTCT+TGG | 0.496799 | 6.3:-41890673 | MS.gene059421:CDS |
| TTAGTCTTAATGTTCAGGGT+TGG | 0.514435 | 6.3:-41890242 | MS.gene059421:intron |
| TGGATGTGGATGGCAAGTTA+TGG | 0.516739 | 6.3:-41888871 | MS.gene059421:CDS |
| AAGGATGGAATGGATTGTCT+TGG | 0.523770 | 6.3:-41890717 | MS.gene059421:CDS |
| GCAATGGCAAGTAATATCTC+AGG | 0.528753 | 6.3:-41890790 | MS.gene059421:CDS |
| TGGTCCAAAGAAGGATGGAA+TGG | 0.564378 | 6.3:-41890727 | MS.gene059421:CDS |
| GAGCAATCACAGGATTATCA+AGG | 0.572072 | 6.3:+41890587 | None:intergenic |
| ATCCAAATACTCATTCTTGG+TGG | 0.578330 | 6.3:-41889191 | MS.gene059421:CDS |
| CTAAATGCTGGTTGAAACCA+AGG | 0.580017 | 6.3:+41888793 | None:intergenic |
| ATAGCTTGACCCCTAAATGC+TGG | 0.585040 | 6.3:+41888781 | None:intergenic |
| TGTGGATGGCAAGTTATGGT+TGG | 0.586186 | 6.3:-41888867 | MS.gene059421:CDS |
| ATACTTTCTTGGTATAACCA+TGG | 0.593597 | 6.3:-41889047 | MS.gene059421:CDS |
| TTGGTTGGTCCAAAGAAGGA+TGG | 0.593790 | 6.3:-41890732 | MS.gene059421:CDS |
| GTTCGTGTCTCTCATACACT+TGG | 0.615372 | 6.3:-41889232 | MS.gene059421:CDS |
| TATGAACCAAGAGCAATCAC+AGG | 0.615818 | 6.3:+41890577 | None:intergenic |
| ATGGAATGGATTGTCTTGGA+TGG | 0.624219 | 6.3:-41890713 | MS.gene059421:CDS |
| ACTTACTCCAAGAAGCAACA+TGG | 0.638023 | 6.3:+41890215 | None:intergenic |
| TGGTTTCAACCAGCATTTAG+GGG | 0.642005 | 6.3:-41888790 | MS.gene059421:CDS |
| ATCTGGTTAGAACAGTGGTA+TGG | 0.647166 | 6.3:-41890637 | MS.gene059421:CDS |
| GTGTGGTCATTGGATGTGGA+TGG | 0.652242 | 6.3:-41888881 | MS.gene059421:CDS |
| GAATGATCTGGTTAGAACAG+TGG | 0.653843 | 6.3:-41890642 | MS.gene059421:CDS |
| TGAAACACTGTTGAGAACCA+TGG | 0.655935 | 6.3:+41889030 | None:intergenic |
| TGGCAAGTAATATCTCAGGA+TGG | 0.670260 | 6.3:-41890786 | MS.gene059421:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGATTTACAATAAATTATA+GGG | + | chr6.3:41889623-41889642 | None:intergenic | 10.0% |
| !! | TGAACATTAAAAAAATTATA+TGG | + | chr6.3:41890279-41890298 | None:intergenic | 10.0% |
| !! | TTAGATTTACAATAAATTAT+AGG | + | chr6.3:41889624-41889643 | None:intergenic | 10.0% |
| !!! | ATTATAATTTTAAAGTATCT+TGG | - | chr6.3:41889265-41889284 | MS.gene059421:intron | 10.0% |
| !!! | GTTTTTTAAACAATAATTTT+AGG | - | chr6.3:41889532-41889551 | MS.gene059421:intron | 10.0% |
| !!! | TCATTTTACATTTATTTTTA+AGG | - | chr6.3:41890100-41890119 | MS.gene059421:intron | 10.0% |
| !!! | TTATTTACATTTTAATTTTG+AGG | - | chr6.3:41890650-41890669 | MS.gene059421:CDS | 10.0% |
| !! | AAATAATAGTGTAATATAAC+AGG | + | chr6.3:41890636-41890655 | None:intergenic | 15.0% |
| !! | AAATACTAACAATTACATTT+AGG | - | chr6.3:41889415-41889434 | MS.gene059421:intron | 15.0% |
| !! | AATACTAACAATTACATTTA+GGG | - | chr6.3:41889416-41889435 | MS.gene059421:intron | 15.0% |
| !! | CAGTTATAAAATAAGAAAAT+GGG | - | chr6.3:41889877-41889896 | MS.gene059421:intron | 15.0% |
| !! | TCAGTTATAAAATAAGAAAA+TGG | - | chr6.3:41889876-41889895 | MS.gene059421:intron | 15.0% |
| !! | TTTATATGTCATGTATATAT+TGG | + | chr6.3:41889822-41889841 | None:intergenic | 15.0% |
| !!! | GTTTTAATGTTATTTTAATG+AGG | + | chr6.3:41889800-41889819 | None:intergenic | 15.0% |
| !! | AATGATTTGACAATTATGAT+TGG | - | chr6.3:41889195-41889214 | MS.gene059421:CDS | 20.0% |
| !! | ATAATCAAAATCAACATCTT+AGG | + | chr6.3:41890248-41890267 | None:intergenic | 20.0% |
| !! | ATTCAATACAAAAGTAACAT+TGG | + | chr6.3:41889078-41889097 | None:intergenic | 20.0% |
| !! | CATTGTTTAAGCAATTTAAA+AGG | - | chr6.3:41889439-41889458 | MS.gene059421:intron | 20.0% |
| !! | TTATTGTAAATCTAAGTACT+TGG | - | chr6.3:41889629-41889648 | MS.gene059421:intron | 20.0% |
| !!! | ATTTATTGAGAAAAAAGTGT+AGG | + | chr6.3:41890200-41890219 | None:intergenic | 20.0% |
| !!! | GATTATAAGTTGAACTAATT+AGG | - | chr6.3:41889391-41889410 | MS.gene059421:intron | 20.0% |
| !!! | TTCTTATTTTATAACTGAGT+TGG | + | chr6.3:41889874-41889893 | None:intergenic | 20.0% |
| !!! | TTTACATTTTAATTTTGAGG+AGG | - | chr6.3:41890653-41890672 | MS.gene059421:CDS | 20.0% |
| ! | ATAGATGAATTGAGTTAACA+TGG | + | chr6.3:41890026-41890045 | None:intergenic | 25.0% |
| ! | GAATTTACAATACTAAGTCT+TGG | - | chr6.3:41888893-41888912 | MS.gene059421:intron | 25.0% |
| ! | TTGGCATGTTATTACATTAT+TGG | - | chr6.3:41890732-41890751 | MS.gene059421:CDS | 25.0% |
| !! | ATGGATATTTTCTATTGCAT+TGG | - | chr6.3:41888799-41888818 | MS.gene059421:CDS | 25.0% |
| !! | ATGTATCATATCTACACTTT+TGG | + | chr6.3:41890482-41890501 | None:intergenic | 25.0% |
| !! | TTGTAAGAGTTTTTGTCTTA+TGG | + | chr6.3:41890149-41890168 | None:intergenic | 25.0% |
| !! | TTTAAAGTATCTTGGTTTCT+TGG | - | chr6.3:41889273-41889292 | MS.gene059421:intron | 25.0% |
| !!! | AATTTTGAGGAGGTTTTTAT+AGG | - | chr6.3:41890663-41890682 | MS.gene059421:CDS | 25.0% |
| AAACCAAGGTAAATTGCAAT+TGG | + | chr6.3:41890762-41890781 | None:intergenic | 30.0% | |
| AACCAAGGTAAATTGCAATT+GGG | + | chr6.3:41890761-41890780 | None:intergenic | 30.0% | |
| AGTGAATTAGCATACTTTCT+TGG | - | chr6.3:41890508-41890527 | MS.gene059421:intron | 30.0% | |
| AGTGTTTCACAAACTATATC+AGG | - | chr6.3:41890550-41890569 | MS.gene059421:intron | 30.0% | |
| ATACTTTCTTGGTATAACCA+TGG | - | chr6.3:41890519-41890538 | MS.gene059421:intron | 30.0% | |
| CTCTTGGTTCATATTCAATT+TGG | - | chr6.3:41888999-41889018 | MS.gene059421:intron | 30.0% | |
| TATCAGGTAATTACTTTGCT+TGG | - | chr6.3:41890566-41890585 | MS.gene059421:intron | 30.0% | |
| TGGTAATTTATGTCATTGGT+TGG | - | chr6.3:41888819-41888838 | MS.gene059421:CDS | 30.0% | |
| TGTAAATCTAAGTACTTGGT+TGG | - | chr6.3:41889633-41889652 | MS.gene059421:intron | 30.0% | |
| TTAATTCACATATACACCGT+CGG | + | chr6.3:41889245-41889264 | None:intergenic | 30.0% | |
| ! | AGTTTTTGTCTTATGGTTTG+AGG | + | chr6.3:41890142-41890161 | None:intergenic | 30.0% |
| ! | GCATTGGTAATTTATGTCAT+TGG | - | chr6.3:41888815-41888834 | MS.gene059421:CDS | 30.0% |
| ! | GTTTTTGTCTTATGGTTTGA+GGG | + | chr6.3:41890141-41890160 | None:intergenic | 30.0% |
| ! | TACACTTTTGGTAAAGATGA+TGG | + | chr6.3:41890470-41890489 | None:intergenic | 30.0% |
| ! | TATGGTTGGTTACATAAACT+TGG | - | chr6.3:41890713-41890732 | MS.gene059421:CDS | 30.0% |
| ! | TTTTTGTCTTATGGTTTGAG+GGG | + | chr6.3:41890140-41890159 | None:intergenic | 30.0% |
| !!! | GCTTTTAGTCTTAATGTTCA+GGG | - | chr6.3:41889320-41889339 | MS.gene059421:intron | 30.0% |
| !!! | TGCTTTTAGTCTTAATGTTC+AGG | - | chr6.3:41889319-41889338 | MS.gene059421:intron | 30.0% |
| AATGAGTATTTGGATGCTCT+TGG | + | chr6.3:41890370-41890389 | None:intergenic | 35.0% | |
| AGCATCCAAATACTCATTCT+TGG | - | chr6.3:41890372-41890391 | MS.gene059421:intron | 35.0% | |
| ATACTAAGTCTTGGTTCATC+TGG | - | chr6.3:41888902-41888921 | MS.gene059421:intron | 35.0% | |
| ATCCAAATACTCATTCTTGG+TGG | - | chr6.3:41890375-41890394 | MS.gene059421:intron | 35.0% | |
| ATGAAACTTGCATAAACTCG+AGG | - | chr6.3:41889696-41889715 | MS.gene059421:intron | 35.0% | |
| ATGGGCATGAACAAAATCAA+AGG | - | chr6.3:41889895-41889914 | MS.gene059421:intron | 35.0% | |
| ATTGTCTTGGATGGCATTTA+GGG | - | chr6.3:41888862-41888881 | MS.gene059421:CDS | 35.0% | |
| GATGGCATTTAGGGAATTAT+GGG | - | chr6.3:41888871-41888890 | MS.gene059421:CDS | 35.0% | |
| GTTTGCATTATTCTTCTTGC+TGG | - | chr6.3:41888953-41888972 | MS.gene059421:intron | 35.0% | |
| TCGAGTTTATGCAAGTTTCA+TGG | + | chr6.3:41889697-41889716 | None:intergenic | 35.0% | |
| TTGGAGTAAGTACAGCATTA+AGG | - | chr6.3:41889363-41889382 | MS.gene059421:intron | 35.0% | |
| TTGGTTTCAACCAGCATTTA+GGG | - | chr6.3:41890775-41890794 | MS.gene059421:CDS | 35.0% | |
| ! | GTTTTTATAGGTGTGGTCAT+TGG | - | chr6.3:41890675-41890694 | MS.gene059421:CDS | 35.0% |
| ! | TCGTTTTGCCTGTATGAAAT+TGG | - | chr6.3:41889752-41889771 | MS.gene059421:intron | 35.0% |
| !! | TTAGTCTTAATGTTCAGGGT+TGG | - | chr6.3:41889324-41889343 | MS.gene059421:intron | 35.0% |
| ACTACGAGCCAATTTCATAC+AGG | + | chr6.3:41889763-41889782 | None:intergenic | 40.0% | |
| ACTTACTCCAAGAAGCAACA+TGG | + | chr6.3:41889354-41889373 | None:intergenic | 40.0% | |
| ATCTGGTTAGAACAGTGGTA+TGG | - | chr6.3:41888929-41888948 | MS.gene059421:intron | 40.0% | |
| ATGTCTCAGTCTCTTCTCAT+TGG | - | chr6.3:41890400-41890419 | MS.gene059421:intron | 40.0% | |
| CAATCCATTCCATCCTTCTT+TGG | + | chr6.3:41888846-41888865 | None:intergenic | 40.0% | |
| CTCCCAATTGCAATTTACCT+TGG | - | chr6.3:41890756-41890775 | MS.gene059421:CDS | 40.0% | |
| CTTGGTTTCAACCAGCATTT+AGG | - | chr6.3:41890774-41890793 | MS.gene059421:CDS | 40.0% | |
| GAATGATCTGGTTAGAACAG+TGG | - | chr6.3:41888924-41888943 | MS.gene059421:intron | 40.0% | |
| GAGCAATCACAGGATTATCA+AGG | + | chr6.3:41888982-41889001 | None:intergenic | 40.0% | |
| GATAATCCTGTGATTGCTCT+TGG | - | chr6.3:41888983-41889002 | MS.gene059421:intron | 40.0% | |
| GATTGTCTTGGATGGCATTT+AGG | - | chr6.3:41888861-41888880 | MS.gene059421:CDS | 40.0% | |
| GGATGGCATTTAGGGAATTA+TGG | - | chr6.3:41888870-41888889 | MS.gene059421:CDS | 40.0% | |
| GTCAATAATCTCTACACCGA+CGG | - | chr6.3:41889226-41889245 | MS.gene059421:CDS | 40.0% | |
| TATGAACCAAGAGCAATCAC+AGG | + | chr6.3:41888992-41889011 | None:intergenic | 40.0% | |
| TGAAACACTGTTGAGAACCA+TGG | + | chr6.3:41890539-41890558 | None:intergenic | 40.0% | |
| TGCCACCAAGAATGAGTATT+TGG | + | chr6.3:41890380-41890399 | None:intergenic | 40.0% | |
| TGGCAAGTAATATCTCAGGA+TGG | - | chr6.3:41888780-41888799 | MS.gene059421:CDS | 40.0% | |
| TGGTTTCAACCAGCATTTAG+GGG | - | chr6.3:41890776-41890795 | MS.gene059421:CDS | 40.0% | |
| ! | CTAAATGCTGGTTGAAACCA+AGG | + | chr6.3:41890776-41890795 | None:intergenic | 40.0% |
| ! | TCCACTAGTCTAGGTATTCT+CGG | + | chr6.3:41889992-41890011 | None:intergenic | 40.0% |
| ! | TGAGGAGGTTTTTATAGGTG+TGG | - | chr6.3:41890668-41890687 | MS.gene059421:CDS | 40.0% |
| ! | TTGGTTCATCTGGAATGATC+TGG | - | chr6.3:41888912-41888931 | MS.gene059421:intron | 40.0% |
| !! | AAGGATGGAATGGATTGTCT+TGG | - | chr6.3:41888849-41888868 | MS.gene059421:CDS | 40.0% |
| !! | ATGGAATGGATTGTCTTGGA+TGG | - | chr6.3:41888853-41888872 | MS.gene059421:CDS | 40.0% |
| ATAGCTTGACCCCTAAATGC+TGG | + | chr6.3:41890788-41890807 | None:intergenic | 45.0% | |
| ATAGGTGTGGTCATTGGATG+TGG | - | chr6.3:41890681-41890700 | MS.gene059421:CDS | 45.0% | |
| CTTGCATAAACTCGAGGCAA+AGG | - | chr6.3:41889702-41889721 | MS.gene059421:intron | 45.0% | |
| GTTCGTGTCTCTCATACACT+TGG | - | chr6.3:41890334-41890353 | MS.gene059421:intron | 45.0% | |
| TGGATGTGGATGGCAAGTTA+TGG | - | chr6.3:41890695-41890714 | MS.gene059421:CDS | 45.0% | |
| TGGTCCAAAGAAGGATGGAA+TGG | - | chr6.3:41888839-41888858 | MS.gene059421:CDS | 45.0% | |
| TGTGGATGGCAAGTTATGGT+TGG | - | chr6.3:41890699-41890718 | MS.gene059421:CDS | 45.0% | |
| ! | GTCATTGGTTGGTCCAAAGA+AGG | - | chr6.3:41888830-41888849 | MS.gene059421:CDS | 45.0% |
| ! | TCGTACGATTCCACTAGTCT+AGG | + | chr6.3:41890001-41890020 | None:intergenic | 45.0% |
| ! | TGGAACTCCATGTTGCTTCT+TGG | - | chr6.3:41889344-41889363 | MS.gene059421:intron | 45.0% |
| ! | TTGGTTGGTCCAAAGAAGGA+TGG | - | chr6.3:41888834-41888853 | MS.gene059421:CDS | 45.0% |
| !!! | TTTTTTAAACAATAATTTTA+GGG | - | chr6.3:41889533-41889552 | MS.gene059421:intron | 5.0% |
| GCCGAGAATACCTAGACTAG+TGG | - | chr6.3:41889988-41890007 | MS.gene059421:intron | 50.0% | |
| GTGTGGTCATTGGATGTGGA+TGG | - | chr6.3:41890685-41890704 | MS.gene059421:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 41888779 | 41890809 | 41888779 | ID=MS.gene059421 |
| chr6.3 | mRNA | 41888779 | 41890809 | 41888779 | ID=MS.gene059421.t1;Parent=MS.gene059421 |
| chr6.3 | exon | 41890568 | 41890809 | 41890568 | ID=MS.gene059421.t1.exon1;Parent=MS.gene059421.t1 |
| chr6.3 | CDS | 41890568 | 41890809 | 41890568 | ID=cds.MS.gene059421.t1;Parent=MS.gene059421.t1 |
| chr6.3 | exon | 41890204 | 41890260 | 41890204 | ID=MS.gene059421.t1.exon2;Parent=MS.gene059421.t1 |
| chr6.3 | CDS | 41890204 | 41890260 | 41890204 | ID=cds.MS.gene059421.t1;Parent=MS.gene059421.t1 |
| chr6.3 | exon | 41889017 | 41889255 | 41889017 | ID=MS.gene059421.t1.exon3;Parent=MS.gene059421.t1 |
| chr6.3 | CDS | 41889017 | 41889255 | 41889017 | ID=cds.MS.gene059421.t1;Parent=MS.gene059421.t1 |
| chr6.3 | exon | 41888779 | 41888903 | 41888779 | ID=MS.gene059421.t1.exon4;Parent=MS.gene059421.t1 |
| chr6.3 | CDS | 41888779 | 41888903 | 41888779 | ID=cds.MS.gene059421.t1;Parent=MS.gene059421.t1 |
| Gene Sequence |
| Protein sequence |
