Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20453.t1 | RHN50035.1 | 97.5 | 675 | 17 | 0 | 1 | 675 | 56 | 730 | 0.00E+00 | 1293.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20453.t1 | Q9ZVH4 | 75.6 | 675 | 164 | 1 | 1 | 675 | 59 | 732 | 5.3e-300 | 1031.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20453.t1 | A0A396HFG7 | 97.5 | 675 | 17 | 0 | 1 | 675 | 56 | 730 | 0.0e+00 | 1293.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene20453 | 0.827046 | 1.94E-54 | -1.69E-46 |
| MS.gene049368 | MS.gene20453 | 0.805442 | 1.33E-49 | -1.69E-46 |
| MS.gene049801 | MS.gene20453 | 0.820153 | 7.97E-53 | -1.69E-46 |
| MS.gene050084 | MS.gene20453 | 0.802754 | 4.83E-49 | -1.69E-46 |
| MS.gene050085 | MS.gene20453 | 0.818817 | 1.61E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene20453 | 0.808921 | 2.44E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene20453 | 0.820548 | 6.47E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene20453 | 0.803026 | 4.24E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene20453 | 0.81503 | 1.14E-51 | -1.69E-46 |
| MS.gene051365 | MS.gene20453 | 0.801596 | 8.36E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene20453 | 0.809776 | 1.60E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene20453 | 0.806963 | 6.37E-50 | -1.69E-46 |
| MS.gene052518 | MS.gene20453 | 0.806095 | 9.71E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene20453 | 0.830505 | 2.83E-55 | -1.69E-46 |
| MS.gene05517 | MS.gene20453 | 0.80745 | 5.03E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene20453 | 0.800881 | 1.17E-48 | -1.69E-46 |
| MS.gene055864 | MS.gene20453 | 0.814061 | 1.87E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene20453 | 0.802775 | 4.78E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene20453 | 0.815114 | 1.09E-51 | -1.69E-46 |
| MS.gene056831 | MS.gene20453 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene20453 | 0.828516 | 8.61E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene20453 | 0.806735 | 7.12E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene20453 | 0.813579 | 2.38E-51 | -1.69E-46 |
| MS.gene06010 | MS.gene20453 | 0.821921 | 3.12E-53 | -1.69E-46 |
| MS.gene060296 | MS.gene20453 | 0.815966 | 7.05E-52 | -1.69E-46 |
| MS.gene060870 | MS.gene20453 | 0.803698 | 3.08E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene20453 | 0.811978 | 5.34E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene20453 | 0.814806 | 1.28E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20453.t1 | MTR_6g011700 | 93.778 | 675 | 17 | 1 | 1 | 675 | 56 | 705 | 0.0 | 1298 |
| MS.gene20453.t1 | MTR_6g011770 | 85.037 | 675 | 76 | 1 | 1 | 675 | 56 | 705 | 0.0 | 1165 |
| MS.gene20453.t1 | MTR_8g056030 | 78.074 | 675 | 147 | 1 | 1 | 675 | 58 | 731 | 0.0 | 1105 |
| MS.gene20453.t1 | MTR_5g039880 | 71.407 | 675 | 192 | 1 | 1 | 675 | 59 | 732 | 0.0 | 1023 |
| MS.gene20453.t1 | MTR_7g039690 | 69.037 | 675 | 184 | 2 | 1 | 675 | 59 | 708 | 0.0 | 974 |
| MS.gene20453.t1 | MTR_7g039660 | 66.815 | 675 | 212 | 3 | 1 | 675 | 58 | 720 | 0.0 | 935 |
| MS.gene20453.t1 | MTR_1g040925 | 65.442 | 599 | 188 | 3 | 79 | 675 | 360 | 941 | 0.0 | 801 |
| MS.gene20453.t1 | MTR_1g040925 | 61.356 | 295 | 114 | 0 | 1 | 295 | 65 | 359 | 3.30e-119 | 379 |
| MS.gene20453.t1 | MTR_5g039770 | 54.197 | 679 | 282 | 7 | 1 | 675 | 1 | 654 | 0.0 | 727 |
| MS.gene20453.t1 | MTR_7g039790 | 53.903 | 679 | 283 | 7 | 1 | 675 | 65 | 717 | 0.0 | 722 |
| MS.gene20453.t1 | MTR_1g040995 | 66.922 | 523 | 170 | 2 | 79 | 599 | 360 | 881 | 0.0 | 719 |
| MS.gene20453.t1 | MTR_1g040995 | 61.356 | 295 | 114 | 0 | 1 | 295 | 65 | 359 | 1.43e-119 | 378 |
| MS.gene20453.t1 | MTR_7g445240 | 52.437 | 677 | 280 | 7 | 1 | 675 | 65 | 701 | 0.0 | 692 |
| MS.gene20453.t1 | MTR_5g040040 | 56.546 | 527 | 121 | 6 | 149 | 675 | 168 | 586 | 0.0 | 562 |
| MS.gene20453.t1 | MTR_2g019260 | 42.920 | 685 | 363 | 15 | 1 | 675 | 126 | 792 | 4.39e-175 | 519 |
| MS.gene20453.t1 | MTR_2g019260 | 41.960 | 653 | 352 | 15 | 1 | 643 | 126 | 761 | 4.99e-161 | 482 |
| MS.gene20453.t1 | MTR_5g039890 | 57.353 | 408 | 129 | 2 | 1 | 363 | 56 | 463 | 1.84e-156 | 460 |
| MS.gene20453.t1 | MTR_5g040180 | 60.703 | 313 | 122 | 1 | 1 | 313 | 48 | 359 | 3.06e-134 | 399 |
| MS.gene20453.t1 | MTR_7g108340 | 35.029 | 688 | 419 | 12 | 6 | 675 | 58 | 735 | 2.76e-131 | 404 |
| MS.gene20453.t1 | MTR_2g437390 | 34.417 | 677 | 411 | 11 | 22 | 675 | 76 | 742 | 1.50e-126 | 392 |
| MS.gene20453.t1 | MTR_4g119413 | 34.199 | 693 | 418 | 11 | 5 | 675 | 68 | 744 | 8.18e-125 | 388 |
| MS.gene20453.t1 | MTR_7g039680 | 58.204 | 323 | 111 | 3 | 1 | 322 | 56 | 355 | 1.11e-122 | 369 |
| MS.gene20453.t1 | MTR_7g039440 | 58.784 | 296 | 121 | 1 | 18 | 313 | 1 | 295 | 5.94e-121 | 363 |
| MS.gene20453.t1 | MTR_1g040965 | 73.953 | 215 | 56 | 0 | 461 | 675 | 4 | 218 | 7.23e-113 | 338 |
| MS.gene20453.t1 | MTR_7g039430 | 60.000 | 280 | 111 | 1 | 1 | 280 | 48 | 326 | 7.71e-113 | 343 |
| MS.gene20453.t1 | MTR_5g040190 | 59.286 | 280 | 113 | 1 | 1 | 280 | 48 | 326 | 4.99e-111 | 339 |
| MS.gene20453.t1 | MTR_4g119413 | 32.325 | 529 | 326 | 9 | 5 | 511 | 68 | 586 | 2.18e-85 | 281 |
| MS.gene20453.t1 | MTR_5g040230 | 62.264 | 159 | 60 | 0 | 1 | 159 | 109 | 267 | 5.17e-63 | 211 |
| MS.gene20453.t1 | MTR_7g039380 | 60.377 | 159 | 63 | 0 | 1 | 159 | 48 | 206 | 3.92e-62 | 206 |
| MS.gene20453.t1 | MTR_7g039770 | 57.009 | 107 | 43 | 2 | 406 | 510 | 1 | 106 | 5.38e-33 | 126 |
| MS.gene20453.t1 | MTR_7g039770 | 60.870 | 92 | 36 | 0 | 584 | 675 | 105 | 196 | 3.63e-30 | 118 |
| MS.gene20453.t1 | MTR_7g445230 | 57.009 | 107 | 43 | 2 | 406 | 510 | 1 | 106 | 5.38e-33 | 126 |
| MS.gene20453.t1 | MTR_7g445230 | 60.870 | 92 | 36 | 0 | 584 | 675 | 105 | 196 | 3.63e-30 | 118 |
| MS.gene20453.t1 | MTR_5g039820 | 42.604 | 169 | 47 | 3 | 512 | 675 | 1 | 124 | 1.27e-29 | 114 |
| MS.gene20453.t1 | MTR_1g099430 | 41.739 | 115 | 29 | 2 | 561 | 675 | 19 | 95 | 6.43e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20453.t1 | AT1G26830 | 75.556 | 675 | 164 | 1 | 1 | 675 | 59 | 732 | 0.0 | 1085 |
| MS.gene20453.t1 | AT1G69670 | 74.519 | 675 | 171 | 1 | 1 | 675 | 59 | 732 | 0.0 | 1066 |
| MS.gene20453.t1 | AT1G69670 | 74.519 | 675 | 171 | 1 | 1 | 675 | 59 | 732 | 0.0 | 1066 |
| MS.gene20453.t1 | AT5G46210 | 42.815 | 682 | 368 | 14 | 1 | 675 | 126 | 792 | 4.77e-167 | 498 |
| MS.gene20453.t1 | AT4G02570 | 34.438 | 694 | 422 | 12 | 4 | 675 | 56 | 738 | 1.71e-132 | 407 |
| MS.gene20453.t1 | AT4G02570 | 34.438 | 694 | 422 | 12 | 4 | 675 | 56 | 738 | 1.71e-132 | 407 |
| MS.gene20453.t1 | AT4G02570 | 34.438 | 694 | 422 | 12 | 4 | 675 | 56 | 738 | 1.71e-132 | 407 |
| MS.gene20453.t1 | AT4G02570 | 34.438 | 694 | 422 | 12 | 4 | 675 | 56 | 738 | 1.71e-132 | 407 |
| MS.gene20453.t1 | AT1G02980 | 34.172 | 676 | 402 | 12 | 28 | 675 | 82 | 742 | 2.13e-118 | 371 |
| MS.gene20453.t1 | AT1G02980 | 34.172 | 676 | 402 | 12 | 28 | 675 | 82 | 742 | 2.13e-118 | 371 |
| MS.gene20453.t1 | AT1G43140 | 32.558 | 688 | 413 | 14 | 6 | 675 | 67 | 721 | 2.65e-106 | 339 |
| MS.gene20453.t1 | AT1G59790 | 27.419 | 310 | 211 | 6 | 6 | 308 | 62 | 364 | 3.35e-31 | 126 |
| MS.gene20453.t1 | AT1G59790 | 25.987 | 304 | 211 | 6 | 6 | 302 | 62 | 358 | 8.64e-28 | 116 |
| MS.gene20453.t1 | AT1G59800 | 29.744 | 195 | 125 | 3 | 5 | 196 | 62 | 247 | 9.81e-22 | 95.5 |
| MS.gene20453.t1 | AT4G12100 | 23.333 | 300 | 197 | 9 | 20 | 310 | 137 | 412 | 8.95e-15 | 77.4 |
Find 134 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGATCTTTCAACCTTTC+AGG | 0.150230 | 6.3:-6406552 | None:intergenic |
| AATATGGTGCTACATAAATT+TGG | 0.153660 | 6.3:+6405757 | None:intergenic |
| AATTAAGATGCTAACGGATT+TGG | 0.200828 | 6.3:+6406125 | MS.gene20453:CDS |
| ACTGACGTGGCAAGCTAATA+TGG | 0.220372 | 6.3:+6407190 | MS.gene20453:CDS |
| TATGGGGAATGCTGATTTAA+AGG | 0.232083 | 6.3:+6407208 | MS.gene20453:CDS |
| ATGAACTTGGTTTGAATCTA+TGG | 0.232138 | 6.3:+6405986 | MS.gene20453:CDS |
| AAACTCCGTAGAGGGATAAA+AGG | 0.263934 | 6.3:+6406741 | MS.gene20453:CDS |
| TTTGTAGAAACTTGAATAAA+AGG | 0.270110 | 6.3:-6406180 | None:intergenic |
| ATATGGTGCTACATAAATTT+GGG | 0.301338 | 6.3:+6405758 | None:intergenic |
| TCAATTCACTTCTAAGTTAG+AGG | 0.310239 | 6.3:+6406950 | MS.gene20453:CDS |
| ATTAAGATGCTAACGGATTT+GGG | 0.331100 | 6.3:+6406126 | MS.gene20453:CDS |
| TACTGGTAAGCAGTTAATTA+TGG | 0.332800 | 6.3:+6406527 | MS.gene20453:CDS |
| AAACATTCAGCTCATGCTTC+TGG | 0.345881 | 6.3:-6407247 | None:intergenic |
| CAAACACATCCTTCTCTTGC+AGG | 0.358631 | 6.3:-6406821 | None:intergenic |
| GCTGATTTAAAGGCTACATT+TGG | 0.371270 | 6.3:+6407218 | MS.gene20453:CDS |
| TTGTTTCGAAGGGTACCTTC+TGG | 0.384248 | 6.3:+6406462 | MS.gene20453:CDS |
| ATAAGCAACACCTAGCAAAA+AGG | 0.386596 | 6.3:+6406853 | MS.gene20453:CDS |
| TCGGATATGTCCTTGCTCAT+TGG | 0.394787 | 6.3:-6407425 | None:intergenic |
| GGAAGATTACATTGCGGACT+AGG | 0.395922 | 6.3:-6407101 | None:intergenic |
| TGGTCTTAGTTTCGTTAGAA+TGG | 0.396066 | 6.3:-6406023 | None:intergenic |
| GTAATCTTCCATCTGAAATC+CGG | 0.403875 | 6.3:+6407114 | MS.gene20453:CDS |
| TCATTTGCAATGCCTTGTTA+TGG | 0.406474 | 6.3:-6405900 | None:intergenic |
| ATTCACTAGCAAGCTCTTCA+AGG | 0.410684 | 6.3:+6407475 | MS.gene20453:CDS |
| TGTTTCGAAGGGTACCTTCT+GGG | 0.414973 | 6.3:+6406463 | MS.gene20453:CDS |
| AGCATCTCATGGTGCTGAGT+TGG | 0.421446 | 6.3:+6407022 | MS.gene20453:CDS |
| GCATCTCATGGTGCTGAGTT+GGG | 0.426946 | 6.3:+6407023 | MS.gene20453:CDS |
| TTGACCTTGTGCTTAAAGAA+AGG | 0.427359 | 6.3:+6406064 | MS.gene20453:CDS |
| AGGGGTTGGTGAGGAGGATG+TGG | 0.428721 | 6.3:+6406761 | MS.gene20453:CDS |
| TTCAAACCAAGTTCATGAAC+GGG | 0.430650 | 6.3:-6405979 | None:intergenic |
| TATCCACACTCTCGTTCATA+TGG | 0.433213 | 6.3:+6406374 | MS.gene20453:CDS |
| GAGGCGTTTAAATGAAGAAA+TGG | 0.441848 | 6.3:+6406272 | MS.gene20453:CDS |
| AACTCCGTAGAGGGATAAAA+GGG | 0.442789 | 6.3:+6406742 | MS.gene20453:CDS |
| GACTTCTTATGATATGATGC+AGG | 0.444611 | 6.3:+6406992 | MS.gene20453:CDS |
| CTGACGTGGCAAGCTAATAT+GGG | 0.447158 | 6.3:+6407191 | MS.gene20453:CDS |
| TTTAAAGGCTACATTTGGTA+AGG | 0.448303 | 6.3:+6407223 | MS.gene20453:CDS |
| ATTCTGAAATGACTTGTCAT+TGG | 0.452379 | 6.3:-6406640 | None:intergenic |
| TTGTGAGGGTAATGAAATCT+AGG | 0.460014 | 6.3:+6407600 | MS.gene20453:CDS |
| TCTGTCCAGGTGCTTACAAC+AGG | 0.465386 | 6.3:+6407062 | MS.gene20453:CDS |
| AGGGACTGTTGTTGCACAAA+GGG | 0.470120 | 6.3:+6407505 | MS.gene20453:CDS |
| CAGTCGTTGGCCTTAGTCAA+AGG | 0.474202 | 6.3:+6407380 | MS.gene20453:CDS |
| AAGGCTTCTCAAAGTCAGTC+TGG | 0.477739 | 6.3:-6406161 | None:intergenic |
| CAGGGTTTCTTAGCATCTCA+TGG | 0.483932 | 6.3:+6407011 | MS.gene20453:CDS |
| ATATTCAAATGCAGAATTCA+AGG | 0.485048 | 6.3:-6406664 | None:intergenic |
| TAATCTTCCATCTGAAATCC+GGG | 0.485583 | 6.3:+6407115 | MS.gene20453:CDS |
| TGGAGGAACTCAACAGGAAG+TGG | 0.491844 | 6.3:+6405872 | MS.gene20453:CDS |
| AGGTGCTTACAACAGGTTCA+TGG | 0.492266 | 6.3:+6407069 | MS.gene20453:CDS |
| CGAGGTCACGAAGCAGCTGC+AGG | 0.494325 | 6.3:+6407652 | MS.gene20453:CDS |
| GATAAAAGGGGTTGGTGAGG+AGG | 0.495340 | 6.3:+6406755 | MS.gene20453:CDS |
| AGTCGTTGGCCTTAGTCAAA+GGG | 0.498877 | 6.3:+6407381 | MS.gene20453:CDS |
| CCGAGACATACTCATGTACA+TGG | 0.503098 | 6.3:+6405924 | MS.gene20453:CDS |
| GAAGAGGTGCCTTCAGTCGT+TGG | 0.504097 | 6.3:+6407367 | MS.gene20453:CDS |
| CATTGCGGACTAGGTTGAGT+TGG | 0.504999 | 6.3:-6407092 | None:intergenic |
| AGAAATGAACTCTGGAGATC+GGG | 0.506629 | 6.3:-6406703 | None:intergenic |
| AAGAAATGAACTCTGGAGAT+CGG | 0.506678 | 6.3:-6406704 | None:intergenic |
| AGGGATAAAAGGGGTTGGTG+AGG | 0.506807 | 6.3:+6406752 | MS.gene20453:CDS |
| GGAGAGAGTATCTCACTACT+TGG | 0.507157 | 6.3:+6406293 | MS.gene20453:CDS |
| TTTATAATTGTGAGCCCAGA+AGG | 0.516365 | 6.3:-6406477 | None:intergenic |
| CATCCATCAGCATATTAACT+AGG | 0.518100 | 6.3:-6406407 | None:intergenic |
| GAATGTATAACTTGTTTCGA+AGG | 0.520242 | 6.3:+6406451 | MS.gene20453:CDS |
| TTTGGGGAGAAACTTTACTC+TGG | 0.520439 | 6.3:+6405775 | MS.gene20453:CDS |
| AAGTTTCGTAGTTATTATCT+CGG | 0.521156 | 6.3:+6407149 | MS.gene20453:CDS |
| CTTAAGCTTAAAACAGAATG+TGG | 0.527384 | 6.3:+6406924 | MS.gene20453:CDS |
| CATCCTTCTCTTGCAGGTAC+CGG | 0.527813 | 6.3:-6406815 | None:intergenic |
| ACAAACAAAGAAATGAACTC+TGG | 0.534253 | 6.3:-6406711 | None:intergenic |
| AGGCCTAGTTAATATGCTGA+TGG | 0.539000 | 6.3:+6406404 | MS.gene20453:CDS |
| AGACAGAAAGCCGCAGATTG+AGG | 0.544522 | 6.3:+6407571 | MS.gene20453:CDS |
| CAATCAATCAAAGCTGCTCA+AGG | 0.545434 | 6.3:+6405838 | MS.gene20453:CDS |
| CTGCAGCTGCTTCGTGACCT+CGG | 0.548193 | 6.3:-6407651 | None:intergenic |
| TTAATTGAATCATGTGATTG+TGG | 0.550947 | 6.3:+6406228 | MS.gene20453:CDS |
| TATAGAAACTCGGCAAAGAG+TGG | 0.552610 | 6.3:+6407544 | MS.gene20453:CDS |
| CATAGACCCCGGATTTCAGA+TGG | 0.553988 | 6.3:-6407122 | None:intergenic |
| TGACTAAGGCCAACGACTGA+AGG | 0.554710 | 6.3:-6407376 | None:intergenic |
| CATTCCTTTCTTTAAGCACA+AGG | 0.554793 | 6.3:-6406068 | None:intergenic |
| AAAGCATTAGTACACACATC+TGG | 0.555795 | 6.3:-6407277 | None:intergenic |
| TGCTGATCGGATGACTTGTA+AGG | 0.559810 | 6.3:+6407307 | MS.gene20453:CDS |
| TAGCCCTACACTATCTGTCC+AGG | 0.560211 | 6.3:+6407049 | MS.gene20453:CDS |
| CAATTCACTTCTAAGTTAGA+GGG | 0.560970 | 6.3:+6406951 | MS.gene20453:CDS |
| TTAAAGGCTACATTTGGTAA+GGG | 0.566080 | 6.3:+6407224 | MS.gene20453:CDS |
| ATGAACCTGTTGTAAGCACC+TGG | 0.566331 | 6.3:-6407067 | None:intergenic |
| TACCCATGTCAGACTTGAAG+AGG | 0.566524 | 6.3:+6407351 | MS.gene20453:CDS |
| AATGTATAACTTGTTTCGAA+GGG | 0.567604 | 6.3:+6406452 | MS.gene20453:CDS |
| GGATGGCAAATATGATGACT+TGG | 0.567971 | 6.3:+6406425 | MS.gene20453:CDS |
| GAGGGTAATGAAATCTAGGC+GGG | 0.574043 | 6.3:+6407604 | MS.gene20453:CDS |
| GACTTGTAAGGACATAGAGC+AGG | 0.578272 | 6.3:+6407319 | MS.gene20453:CDS |
| AGACGCTGCACAAAATCGAC+AGG | 0.580439 | 6.3:-6406570 | None:intergenic |
| AAGAAGTGTATCTAGAAGCC+TGG | 0.580905 | 6.3:-6406043 | None:intergenic |
| TTTCCGGTACCTGCAAGAGA+AGG | 0.581468 | 6.3:+6406812 | MS.gene20453:CDS |
| GCACCTCTTCAAGTCTGACA+TGG | 0.581848 | 6.3:-6407354 | None:intergenic |
| ACTTCTTATGATATGATGCA+GGG | 0.582653 | 6.3:+6406993 | MS.gene20453:CDS |
| CCATGTACATGAGTATGTCT+CGG | 0.582690 | 6.3:-6405924 | None:intergenic |
| CTAGTTAATATGCTGATGGA+TGG | 0.583171 | 6.3:+6406408 | MS.gene20453:CDS |
| GAACTTAATTAAGATGCTAA+CGG | 0.585501 | 6.3:+6406119 | MS.gene20453:CDS |
| GCACCTGGACAGATAGTGTA+GGG | 0.589037 | 6.3:-6407052 | None:intergenic |
| TTGTCTCAGATGAGCAGTAA+CGG | 0.592895 | 6.3:-6405809 | None:intergenic |
| CTCGTTCATATGGAGAACTC+AGG | 0.601425 | 6.3:+6406384 | MS.gene20453:CDS |
| AGTTAATTATGGATCCTGAA+AGG | 0.604723 | 6.3:+6406538 | MS.gene20453:CDS |
| ATTCAAACCAAGTTCATGAA+CGG | 0.606269 | 6.3:-6405980 | None:intergenic |
| TAGGGACTGTTGTTGCACAA+AGG | 0.608557 | 6.3:+6407504 | MS.gene20453:CDS |
| TCGGAAAGAGCCAATGAGCA+AGG | 0.610423 | 6.3:+6407415 | MS.gene20453:CDS |
| TCTCCATATGAACGAGAGTG+TGG | 0.611580 | 6.3:-6406377 | None:intergenic |
| ATCTCGGCGCTCACAGTGGT+AGG | 0.615484 | 6.3:+6407165 | MS.gene20453:CDS |
| TATGGTGCTACATAAATTTG+GGG | 0.615594 | 6.3:+6405759 | None:intergenic |
| TAGATGACAAACTCCGTAGA+GGG | 0.616553 | 6.3:+6406733 | MS.gene20453:CDS |
| CGTAGAGGGATAAAAGGGGT+TGG | 0.618517 | 6.3:+6406747 | MS.gene20453:CDS |
| AGATTGAGGCAGCAATTGTG+AGG | 0.619824 | 6.3:+6407585 | MS.gene20453:CDS |
| AATGGTGAAGTTATTAACAG+AGG | 0.626303 | 6.3:+6406087 | MS.gene20453:CDS |
| AGAAACTCGGCAAAGAGTGG+AGG | 0.629526 | 6.3:+6407547 | MS.gene20453:CDS |
| TTATTAACAGAGGCTTGATG+AGG | 0.631918 | 6.3:+6406097 | MS.gene20453:CDS |
| ACAATTGCTGCCTCAATCTG+CGG | 0.633040 | 6.3:-6407581 | None:intergenic |
| AACCAGAAAATATAGAAACT+CGG | 0.640392 | 6.3:+6407534 | MS.gene20453:CDS |
| CACCTCTTCAAGTCTGACAT+GGG | 0.641603 | 6.3:-6407353 | None:intergenic |
| GGAGGAACTCAACAGGAAGT+GGG | 0.642357 | 6.3:+6405873 | MS.gene20453:CDS |
| ATCAGAGATAACTAGTGTGG+TGG | 0.644109 | 6.3:+6406329 | MS.gene20453:CDS |
| TACTGATTCAAGCAAGATAG+CGG | 0.645828 | 6.3:-6407772 | None:intergenic |
| TCAAACCAAGTTCATGAACG+GGG | 0.658755 | 6.3:-6405978 | None:intergenic |
| CAAACCAAGTTCATGAACGG+GGG | 0.661181 | 6.3:-6405977 | None:intergenic |
| TGACGTGGCAAGCTAATATG+GGG | 0.661724 | 6.3:+6407192 | MS.gene20453:CDS |
| GTAGATGACAAACTCCGTAG+AGG | 0.666218 | 6.3:+6406732 | MS.gene20453:CDS |
| TGAATCAGAGATAACTAGTG+TGG | 0.666879 | 6.3:+6406326 | MS.gene20453:CDS |
| TATTATCTCGGCGCTCACAG+TGG | 0.667802 | 6.3:+6407161 | MS.gene20453:CDS |
| GATTGAGGCAGCAATTGTGA+GGG | 0.673825 | 6.3:+6407586 | MS.gene20453:CDS |
| GAAACTTCTCACATAGACCC+CGG | 0.675261 | 6.3:-6407133 | None:intergenic |
| ATTCTAACGAAACTAAGACC+AGG | 0.681195 | 6.3:+6406025 | MS.gene20453:CDS |
| AGCACCTGGACAGATAGTGT+AGG | 0.681962 | 6.3:-6407053 | None:intergenic |
| ACATAATAATGTCATCGCCG+AGG | 0.682843 | 6.3:+6407634 | MS.gene20453:CDS |
| TCAGATGGAAGATTACATTG+CGG | 0.706660 | 6.3:-6407107 | None:intergenic |
| AATCTTCCATCTGAAATCCG+GGG | 0.712246 | 6.3:+6407116 | MS.gene20453:CDS |
| TGAGGGTAATGAAATCTAGG+CGG | 0.717066 | 6.3:+6407603 | MS.gene20453:CDS |
| CTTGTGCTTAAAGAAAGGAA+TGG | 0.717251 | 6.3:+6406069 | MS.gene20453:CDS |
| ACTATCTGAAGAAAGCTGAG+AGG | 0.722758 | 6.3:+6406253 | MS.gene20453:CDS |
| GAAGTGGGTAGACCATAACA+AGG | 0.733172 | 6.3:+6405888 | MS.gene20453:CDS |
| ACTCCGTAGAGGGATAAAAG+GGG | 0.737364 | 6.3:+6406743 | MS.gene20453:CDS |
| ATATGACAAAGTTATCACAA+CGG | 0.738442 | 6.3:+6406611 | MS.gene20453:CDS |
| ACAGTGGTAGGAGACTGACG+TGG | 0.804313 | 6.3:+6407177 | MS.gene20453:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATGATTCAATTAATTTTT+GGG | - | chr6.3:6406223-6406242 | None:intergenic | 15.0% |
| !! | TTTGTAGAAACTTGAATAAA+AGG | - | chr6.3:6406183-6406202 | None:intergenic | 20.0% |
| !!! | ATCCTGTTGTTATTAAAAAA+CGG | + | chr6.3:6407690-6407709 | MS.gene20453:CDS | 20.0% |
| !!! | CACATGATTCAATTAATTTT+TGG | - | chr6.3:6406224-6406243 | None:intergenic | 20.0% |
| !!! | TTTTTAATAACAACAGGATT+AGG | - | chr6.3:6407689-6407708 | None:intergenic | 20.0% |
| ! | AACCAGAAAATATAGAAACT+CGG | + | chr6.3:6407534-6407553 | MS.gene20453:CDS | 25.0% |
| ! | AAGTTTCGTAGTTATTATCT+CGG | + | chr6.3:6407149-6407168 | MS.gene20453:CDS | 25.0% |
| ! | ATATGACAAAGTTATCACAA+CGG | + | chr6.3:6406611-6406630 | MS.gene20453:CDS | 25.0% |
| ! | ATATTCAAATGCAGAATTCA+AGG | - | chr6.3:6406667-6406686 | None:intergenic | 25.0% |
| ! | GAACTTAATTAAGATGCTAA+CGG | + | chr6.3:6406119-6406138 | MS.gene20453:CDS | 25.0% |
| ! | TTAATTGAATCATGTGATTG+TGG | + | chr6.3:6406228-6406247 | MS.gene20453:CDS | 25.0% |
| !! | ATGTCATGACTTCTTTTATA+CGG | + | chr6.3:6406502-6406521 | MS.gene20453:CDS | 25.0% |
| !!! | AATGTATAACTTGTTTCGAA+GGG | + | chr6.3:6406452-6406471 | MS.gene20453:CDS | 25.0% |
| !!! | ATCCGTTTTTTAATAACAAC+AGG | - | chr6.3:6407695-6407714 | None:intergenic | 25.0% |
| AAGCTCTTCAAGGTAAAAAT+AGG | + | chr6.3:6407485-6407504 | MS.gene20453:CDS | 30.0% | |
| AATGGTGAAGTTATTAACAG+AGG | + | chr6.3:6406087-6406106 | MS.gene20453:CDS | 30.0% | |
| ACAAACAAAGAAATGAACTC+TGG | - | chr6.3:6406714-6406733 | None:intergenic | 30.0% | |
| ACTTCTTATGATATGATGCA+GGG | + | chr6.3:6406993-6407012 | MS.gene20453:CDS | 30.0% | |
| AGCTCTTCAAGGTAAAAATA+GGG | + | chr6.3:6407486-6407505 | MS.gene20453:CDS | 30.0% | |
| AGTTAATTATGGATCCTGAA+AGG | + | chr6.3:6406538-6406557 | MS.gene20453:CDS | 30.0% | |
| ATTCAAACCAAGTTCATGAA+CGG | - | chr6.3:6405983-6406002 | None:intergenic | 30.0% | |
| CAATTCACTTCTAAGTTAGA+GGG | + | chr6.3:6406951-6406970 | MS.gene20453:CDS | 30.0% | |
| CTTAAGCTTAAAACAGAATG+TGG | + | chr6.3:6406924-6406943 | MS.gene20453:CDS | 30.0% | |
| GAAAAAGAACACATCATCTT+CGG | - | chr6.3:6407447-6407466 | None:intergenic | 30.0% | |
| TACTGGTAAGCAGTTAATTA+TGG | + | chr6.3:6406527-6406546 | MS.gene20453:CDS | 30.0% | |
| TCAAAGGGAAAAATGTTCTT+CGG | + | chr6.3:6407396-6407415 | MS.gene20453:CDS | 30.0% | |
| TCAATTCACTTCTAAGTTAG+AGG | + | chr6.3:6406950-6406969 | MS.gene20453:CDS | 30.0% | |
| TTAAAGGCTACATTTGGTAA+GGG | + | chr6.3:6407224-6407243 | MS.gene20453:CDS | 30.0% | |
| TTTAAAGGCTACATTTGGTA+AGG | + | chr6.3:6407223-6407242 | MS.gene20453:CDS | 30.0% | |
| ! | AACATTTTTCCCTTTGACTA+AGG | - | chr6.3:6407393-6407412 | None:intergenic | 30.0% |
| ! | ATGAACTTGGTTTGAATCTA+TGG | + | chr6.3:6405986-6406005 | MS.gene20453:CDS | 30.0% |
| ! | TGTCATGACTTCTTTTATAC+GGG | + | chr6.3:6406503-6406522 | MS.gene20453:CDS | 30.0% |
| !! | AATTAAGATGCTAACGGATT+TGG | + | chr6.3:6406125-6406144 | MS.gene20453:CDS | 30.0% |
| !! | ATTAAGATGCTAACGGATTT+GGG | + | chr6.3:6406126-6406145 | MS.gene20453:CDS | 30.0% |
| !! | ATTCTGAAATGACTTGTCAT+TGG | - | chr6.3:6406643-6406662 | None:intergenic | 30.0% |
| !! | GAATGTATAACTTGTTTCGA+AGG | + | chr6.3:6406451-6406470 | MS.gene20453:CDS | 30.0% |
| ATAAGCAACACCTAGCAAAA+AGG | + | chr6.3:6406853-6406872 | MS.gene20453:CDS | 35.0% | |
| ATTCTAACGAAACTAAGACC+AGG | + | chr6.3:6406025-6406044 | MS.gene20453:CDS | 35.0% | |
| CATCCATCAGCATATTAACT+AGG | - | chr6.3:6406410-6406429 | None:intergenic | 35.0% | |
| CATTCCTTTCTTTAAGCACA+AGG | - | chr6.3:6406071-6406090 | None:intergenic | 35.0% | |
| CTAGTTAATATGCTGATGGA+TGG | + | chr6.3:6406408-6406427 | MS.gene20453:CDS | 35.0% | |
| CTTGTGCTTAAAGAAAGGAA+TGG | + | chr6.3:6406069-6406088 | MS.gene20453:CDS | 35.0% | |
| GACTTCTTATGATATGATGC+AGG | + | chr6.3:6406992-6407011 | MS.gene20453:CDS | 35.0% | |
| TAAAAACTCACGCTCAATGA+GGG | - | chr6.3:6407723-6407742 | None:intergenic | 35.0% | |
| TAGCAAAAAGGCTTCTTTCA+GGG | + | chr6.3:6406865-6406884 | MS.gene20453:CDS | 35.0% | |
| TCAGATGGAAGATTACATTG+CGG | - | chr6.3:6407110-6407129 | None:intergenic | 35.0% | |
| TGAATCAGAGATAACTAGTG+TGG | + | chr6.3:6406326-6406345 | MS.gene20453:CDS | 35.0% | |
| TTATTAACAGAGGCTTGATG+AGG | + | chr6.3:6406097-6406116 | MS.gene20453:CDS | 35.0% | |
| TTCAAACCAAGTTCATGAAC+GGG | - | chr6.3:6405982-6406001 | None:intergenic | 35.0% | |
| TTGACCTTGTGCTTAAAGAA+AGG | + | chr6.3:6406064-6406083 | MS.gene20453:CDS | 35.0% | |
| TTGTGAGGGTAATGAAATCT+AGG | + | chr6.3:6407600-6407619 | MS.gene20453:CDS | 35.0% | |
| TTTATAATTGTGAGCCCAGA+AGG | - | chr6.3:6406480-6406499 | None:intergenic | 35.0% | |
| ! | AAAGCATTAGTACACACATC+TGG | - | chr6.3:6407280-6407299 | None:intergenic | 35.0% |
| ! | AAGAAATGAACTCTGGAGAT+CGG | - | chr6.3:6406707-6406726 | None:intergenic | 35.0% |
| ! | ACAAAGTCATGATGCTTTTC+CGG | + | chr6.3:6406796-6406815 | MS.gene20453:CDS | 35.0% |
| ! | ACTTCTTTTATACGGGATAC+TGG | + | chr6.3:6406510-6406529 | MS.gene20453:CDS | 35.0% |
| ! | GAGGCGTTTAAATGAAGAAA+TGG | + | chr6.3:6406272-6406291 | MS.gene20453:CDS | 35.0% |
| ! | GCTGATTTAAAGGCTACATT+TGG | + | chr6.3:6407218-6407237 | MS.gene20453:CDS | 35.0% |
| ! | GTAATCTTCCATCTGAAATC+CGG | + | chr6.3:6407114-6407133 | MS.gene20453:CDS | 35.0% |
| ! | TAATCTTCCATCTGAAATCC+GGG | + | chr6.3:6407115-6407134 | MS.gene20453:CDS | 35.0% |
| ! | TCAAGGAGATATTTTCTTGG+AGG | + | chr6.3:6405855-6405874 | MS.gene20453:CDS | 35.0% |
| ! | TCATTTGCAATGCCTTGTTA+TGG | - | chr6.3:6405903-6405922 | None:intergenic | 35.0% |
| ! | TGCCGAGTTTCTATATTTTC+TGG | - | chr6.3:6407539-6407558 | None:intergenic | 35.0% |
| ! | TGCTCAAGGAGATATTTTCT+TGG | + | chr6.3:6405852-6405871 | MS.gene20453:CDS | 35.0% |
| ! | TGCTTTTCAACAATGCTGAT+CGG | + | chr6.3:6407294-6407313 | MS.gene20453:CDS | 35.0% |
| ! | TGGTCTTAGTTTCGTTAGAA+TGG | - | chr6.3:6406026-6406045 | None:intergenic | 35.0% |
| !! | GTTTTTAGAGAGGGATAAAG+TGG | + | chr6.3:6407736-6407755 | MS.gene20453:CDS | 35.0% |
| !! | TATGGGGAATGCTGATTTAA+AGG | + | chr6.3:6407208-6407227 | MS.gene20453:CDS | 35.0% |
| AAACATTCAGCTCATGCTTC+TGG | - | chr6.3:6407250-6407269 | None:intergenic | 40.0% | |
| AAACTCCGTAGAGGGATAAA+AGG | + | chr6.3:6406741-6406760 | MS.gene20453:CDS | 40.0% | |
| AACTCCGTAGAGGGATAAAA+GGG | + | chr6.3:6406742-6406761 | MS.gene20453:CDS | 40.0% | |
| ACAGGATCTTTCAACCTTTC+AGG | - | chr6.3:6406555-6406574 | None:intergenic | 40.0% | |
| ACATAATAATGTCATCGCCG+AGG | + | chr6.3:6407634-6407653 | MS.gene20453:CDS | 40.0% | |
| ACTATCTGAAGAAAGCTGAG+AGG | + | chr6.3:6406253-6406272 | MS.gene20453:CDS | 40.0% | |
| AGGCCTAGTTAATATGCTGA+TGG | + | chr6.3:6406404-6406423 | MS.gene20453:CDS | 40.0% | |
| ATCAGAGATAACTAGTGTGG+TGG | + | chr6.3:6406329-6406348 | MS.gene20453:CDS | 40.0% | |
| ATTCACTAGCAAGCTCTTCA+AGG | + | chr6.3:6407475-6407494 | MS.gene20453:CDS | 40.0% | |
| CAATCAATCAAAGCTGCTCA+AGG | + | chr6.3:6405838-6405857 | MS.gene20453:CDS | 40.0% | |
| CCATGTACATGAGTATGTCT+CGG | - | chr6.3:6405927-6405946 | None:intergenic | 40.0% | |
| CTAAAAACTCACGCTCAATG+AGG | - | chr6.3:6407724-6407743 | None:intergenic | 40.0% | |
| CTAGCAAAAAGGCTTCTTTC+AGG | + | chr6.3:6406864-6406883 | MS.gene20453:CDS | 40.0% | |
| GGATGGCAAATATGATGACT+TGG | + | chr6.3:6406425-6406444 | MS.gene20453:CDS | 40.0% | |
| TAGATGACAAACTCCGTAGA+GGG | + | chr6.3:6406733-6406752 | MS.gene20453:CDS | 40.0% | |
| TATAGAAACTCGGCAAAGAG+TGG | + | chr6.3:6407544-6407563 | MS.gene20453:CDS | 40.0% | |
| TATCCACACTCTCGTTCATA+TGG | + | chr6.3:6406374-6406393 | MS.gene20453:CDS | 40.0% | |
| TCAAACCAAGTTCATGAACG+GGG | - | chr6.3:6405981-6406000 | None:intergenic | 40.0% | |
| TGAGGGTAATGAAATCTAGG+CGG | + | chr6.3:6407603-6407622 | MS.gene20453:CDS | 40.0% | |
| TTGTCTCAGATGAGCAGTAA+CGG | - | chr6.3:6405812-6405831 | None:intergenic | 40.0% | |
| TTTGGGGAGAAACTTTACTC+TGG | + | chr6.3:6405775-6405794 | MS.gene20453:CDS | 40.0% | |
| ! | AAGAAGTGTATCTAGAAGCC+TGG | - | chr6.3:6406046-6406065 | None:intergenic | 40.0% |
| ! | AATCTTCCATCTGAAATCCG+GGG | + | chr6.3:6407116-6407135 | MS.gene20453:CDS | 40.0% |
| ! | AGAAATGAACTCTGGAGATC+GGG | - | chr6.3:6406706-6406725 | None:intergenic | 40.0% |
| ! | CTGAAAGAAGCCTTTTTGCT+AGG | - | chr6.3:6406866-6406885 | None:intergenic | 40.0% |
| ! | TTTTCTTGGAGGAACTCAAC+AGG | + | chr6.3:6405866-6405885 | MS.gene20453:CDS | 40.0% |
| !! | TGAGCGTGAGTTTTTAGAGA+GGG | + | chr6.3:6407727-6407746 | MS.gene20453:CDS | 40.0% |
| !! | TTGAGCGTGAGTTTTTAGAG+AGG | + | chr6.3:6407726-6407745 | MS.gene20453:CDS | 40.0% |
| AAAACCCCCGTTCATGAACT+TGG | + | chr6.3:6405973-6405992 | MS.gene20453:CDS | 45.0% | |
| AAGGCTTCTCAAAGTCAGTC+TGG | - | chr6.3:6406164-6406183 | None:intergenic | 45.0% | |
| ACAATTGCTGCCTCAATCTG+CGG | - | chr6.3:6407584-6407603 | None:intergenic | 45.0% | |
| ACTCCGTAGAGGGATAAAAG+GGG | + | chr6.3:6406743-6406762 | MS.gene20453:CDS | 45.0% | |
| ACTGACGTGGCAAGCTAATA+TGG | + | chr6.3:6407190-6407209 | MS.gene20453:CDS | 45.0% | |
| AGATTGAGGCAGCAATTGTG+AGG | + | chr6.3:6407585-6407604 | MS.gene20453:CDS | 45.0% | |
| AGGGACTGTTGTTGCACAAA+GGG | + | chr6.3:6407505-6407524 | MS.gene20453:CDS | 45.0% | |
| AGGTGCTTACAACAGGTTCA+TGG | + | chr6.3:6407069-6407088 | MS.gene20453:CDS | 45.0% | |
| ATGAACCTGTTGTAAGCACC+TGG | - | chr6.3:6407070-6407089 | None:intergenic | 45.0% | |
| CAAACACATCCTTCTCTTGC+AGG | - | chr6.3:6406824-6406843 | None:intergenic | 45.0% | |
| CAAACCAAGTTCATGAACGG+GGG | - | chr6.3:6405980-6405999 | None:intergenic | 45.0% | |
| CACCTCTTCAAGTCTGACAT+GGG | - | chr6.3:6407356-6407375 | None:intergenic | 45.0% | |
| CAGGGTTTCTTAGCATCTCA+TGG | + | chr6.3:6407011-6407030 | MS.gene20453:CDS | 45.0% | |
| CCGAGACATACTCATGTACA+TGG | + | chr6.3:6405924-6405943 | MS.gene20453:CDS | 45.0% | |
| CTCGTTCATATGGAGAACTC+AGG | + | chr6.3:6406384-6406403 | MS.gene20453:CDS | 45.0% | |
| CTGACGTGGCAAGCTAATAT+GGG | + | chr6.3:6407191-6407210 | MS.gene20453:CDS | 45.0% | |
| GAAACTTCTCACATAGACCC+CGG | - | chr6.3:6407136-6407155 | None:intergenic | 45.0% | |
| GAAGTGGGTAGACCATAACA+AGG | + | chr6.3:6405888-6405907 | MS.gene20453:CDS | 45.0% | |
| GACTTGTAAGGACATAGAGC+AGG | + | chr6.3:6407319-6407338 | MS.gene20453:CDS | 45.0% | |
| GAGGGTAATGAAATCTAGGC+GGG | + | chr6.3:6407604-6407623 | MS.gene20453:CDS | 45.0% | |
| GATTGAGGCAGCAATTGTGA+GGG | + | chr6.3:6407586-6407605 | MS.gene20453:CDS | 45.0% | |
| GGAAGATTACATTGCGGACT+AGG | - | chr6.3:6407104-6407123 | None:intergenic | 45.0% | |
| GTAGATGACAAACTCCGTAG+AGG | + | chr6.3:6406732-6406751 | MS.gene20453:CDS | 45.0% | |
| TACCCATGTCAGACTTGAAG+AGG | + | chr6.3:6407351-6407370 | MS.gene20453:CDS | 45.0% | |
| TAGGGACTGTTGTTGCACAA+AGG | + | chr6.3:6407504-6407523 | MS.gene20453:CDS | 45.0% | |
| TCGGATATGTCCTTGCTCAT+TGG | - | chr6.3:6407428-6407447 | None:intergenic | 45.0% | |
| TCTCCATATGAACGAGAGTG+TGG | - | chr6.3:6406380-6406399 | None:intergenic | 45.0% | |
| TGACGTGGCAAGCTAATATG+GGG | + | chr6.3:6407192-6407211 | MS.gene20453:CDS | 45.0% | |
| ! | CAACCCCTTTTATCCCTCTA+CGG | - | chr6.3:6406749-6406768 | None:intergenic | 45.0% |
| ! | CGATTTTGTGCAGCGTCTTT+TGG | + | chr6.3:6406575-6406594 | MS.gene20453:CDS | 45.0% |
| ! | GCAGCGTCTTTTGGATTTGA+AGG | + | chr6.3:6406584-6406603 | MS.gene20453:CDS | 45.0% |
| ! | GTTCATGAACGGGGGTTTTA+CGG | - | chr6.3:6405972-6405991 | None:intergenic | 45.0% |
| ! | TGCTGATCGGATGACTTGTA+AGG | + | chr6.3:6407307-6407326 | MS.gene20453:CDS | 45.0% |
| !! | AGTCGTTGGCCTTAGTCAAA+GGG | + | chr6.3:6407381-6407400 | MS.gene20453:CDS | 45.0% |
| !! | GGAGAGAGTATCTCACTACT+TGG | + | chr6.3:6406293-6406312 | MS.gene20453:CDS | 45.0% |
| !! | TGTTTCGAAGGGTACCTTCT+GGG | + | chr6.3:6406463-6406482 | MS.gene20453:CDS | 45.0% |
| !! | TTGTTTCGAAGGGTACCTTC+TGG | + | chr6.3:6406462-6406481 | MS.gene20453:CDS | 45.0% |
| AGAAACTCGGCAAAGAGTGG+AGG | + | chr6.3:6407547-6407566 | MS.gene20453:CDS | 50.0% | |
| AGACAGAAAGCCGCAGATTG+AGG | + | chr6.3:6407571-6407590 | MS.gene20453:CDS | 50.0% | |
| AGACGCTGCACAAAATCGAC+AGG | - | chr6.3:6406573-6406592 | None:intergenic | 50.0% | |
| AGCACCTGGACAGATAGTGT+AGG | - | chr6.3:6407056-6407075 | None:intergenic | 50.0% | |
| CATAGACCCCGGATTTCAGA+TGG | - | chr6.3:6407125-6407144 | None:intergenic | 50.0% | |
| CATCCTTCTCTTGCAGGTAC+CGG | - | chr6.3:6406818-6406837 | None:intergenic | 50.0% | |
| CGTAGAGGGATAAAAGGGGT+TGG | + | chr6.3:6406747-6406766 | MS.gene20453:CDS | 50.0% | |
| GCACCTCTTCAAGTCTGACA+TGG | - | chr6.3:6407357-6407376 | None:intergenic | 50.0% | |
| GCACCTGGACAGATAGTGTA+GGG | - | chr6.3:6407055-6407074 | None:intergenic | 50.0% | |
| GGAGGAACTCAACAGGAAGT+GGG | + | chr6.3:6405873-6405892 | MS.gene20453:CDS | 50.0% | |
| TAGCCCTACACTATCTGTCC+AGG | + | chr6.3:6407049-6407068 | MS.gene20453:CDS | 50.0% | |
| TATTATCTCGGCGCTCACAG+TGG | + | chr6.3:6407161-6407180 | MS.gene20453:CDS | 50.0% | |
| TCGGAAAGAGCCAATGAGCA+AGG | + | chr6.3:6407415-6407434 | MS.gene20453:CDS | 50.0% | |
| TCTGTCCAGGTGCTTACAAC+AGG | + | chr6.3:6407062-6407081 | MS.gene20453:CDS | 50.0% | |
| TGACTAAGGCCAACGACTGA+AGG | - | chr6.3:6407379-6407398 | None:intergenic | 50.0% | |
| TGGAGGAACTCAACAGGAAG+TGG | + | chr6.3:6405872-6405891 | MS.gene20453:CDS | 50.0% | |
| TTTCCGGTACCTGCAAGAGA+AGG | + | chr6.3:6406812-6406831 | MS.gene20453:CDS | 50.0% | |
| ! | AGCATCTCATGGTGCTGAGT+TGG | + | chr6.3:6407022-6407041 | MS.gene20453:CDS | 50.0% |
| ! | GCATCTCATGGTGCTGAGTT+GGG | + | chr6.3:6407023-6407042 | MS.gene20453:CDS | 50.0% |
| !! | AGGGATAAAAGGGGTTGGTG+AGG | + | chr6.3:6406752-6406771 | MS.gene20453:CDS | 50.0% |
| !! | CAGTCGTTGGCCTTAGTCAA+AGG | + | chr6.3:6407380-6407399 | MS.gene20453:CDS | 50.0% |
| !! | CATTGCGGACTAGGTTGAGT+TGG | - | chr6.3:6407095-6407114 | None:intergenic | 50.0% |
| !! | GATAAAAGGGGTTGGTGAGG+AGG | + | chr6.3:6406755-6406774 | MS.gene20453:CDS | 50.0% |
| ACAGTGGTAGGAGACTGACG+TGG | + | chr6.3:6407177-6407196 | MS.gene20453:CDS | 55.0% | |
| ! | ACGGGGGTTTTACGGTTGCT+TGG | - | chr6.3:6405964-6405983 | None:intergenic | 55.0% |
| !! | GAAGAGGTGCCTTCAGTCGT+TGG | + | chr6.3:6407367-6407386 | MS.gene20453:CDS | 55.0% |
| ATCTCGGCGCTCACAGTGGT+AGG | + | chr6.3:6407165-6407184 | MS.gene20453:CDS | 60.0% | |
| CTGCAGCTGCTTCGTGACCT+CGG | - | chr6.3:6407654-6407673 | None:intergenic | 60.0% | |
| !! | AGGGGTTGGTGAGGAGGATG+TGG | + | chr6.3:6406761-6406780 | MS.gene20453:CDS | 60.0% |
| CGAGGTCACGAAGCAGCTGC+AGG | + | chr6.3:6407652-6407671 | MS.gene20453:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 6405760 | 6407787 | 6405760 | ID=MS.gene20453 |
| chr6.3 | mRNA | 6405760 | 6407787 | 6405760 | ID=MS.gene20453.t1;Parent=MS.gene20453 |
| chr6.3 | exon | 6405760 | 6407787 | 6405760 | ID=MS.gene20453.t1.exon1;Parent=MS.gene20453.t1 |
| chr6.3 | CDS | 6405760 | 6407787 | 6405760 | ID=cds.MS.gene20453.t1;Parent=MS.gene20453.t1 |
| Gene Sequence |
| Protein sequence |
