Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21109.t1 | XP_004495837.1 | 87.5 | 295 | 28 | 4 | 1 | 292 | 7 | 295 | 5.60E-125 | 457.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21109.t1 | F4HVZ5 | 71.9 | 253 | 57 | 5 | 44 | 292 | 36 | 278 | 1.7e-82 | 307.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21109.t1 | A0A1S2XX43 | 87.5 | 295 | 28 | 4 | 1 | 292 | 7 | 295 | 4.1e-125 | 457.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050442 | MS.gene21109 | 0.830601 | 2.68E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene21109 | 0.803191 | 3.92E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene21109 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene052860 | MS.gene21109 | 0.807862 | 4.11E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene21109 | 0.804236 | 2.38E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene21109 | 0.807896 | 4.04E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene21109 | 0.829432 | 5.17E-55 | -1.69E-46 |
| MS.gene056787 | MS.gene21109 | 0.801439 | 9.00E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene21109 | 0.808838 | 2.54E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene21109 | 0.801454 | 8.94E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene21109 | 0.807255 | 5.53E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene21109 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene060084 | MS.gene21109 | 0.820889 | 5.40E-53 | -1.69E-46 |
| MS.gene060296 | MS.gene21109 | 0.807229 | 5.60E-50 | -1.69E-46 |
| MS.gene060297 | MS.gene21109 | 0.822539 | 2.24E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene21109 | 0.826308 | 2.91E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene21109 | 0.81268 | 3.75E-51 | -1.69E-46 |
| MS.gene060802 | MS.gene21109 | 0.810925 | 9.04E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene21109 | 0.800041 | 1.74E-48 | -1.69E-46 |
| MS.gene060998 | MS.gene21109 | 0.803302 | 3.72E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21109.t1 | MTR_1g085470 | 96.575 | 292 | 9 | 1 | 1 | 292 | 1 | 291 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21109.t1 | AT1G02330 | 67.347 | 294 | 69 | 7 | 9 | 292 | 2 | 278 | 1.55e-119 | 344 |
Find 0 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTATAATTAGAATTTTTT+TGG | - | 10911:11882-11901 | MS.gene21109:intron | 10.0% |
| !!! | TTTAATTATTTTTTCTAACT+AGG | + | 10911:13840-13859 | None:intergenic | 10.0% |
| !!! | TTTTTAGAAATTTATATGAA+TGG | - | 10911:11929-11948 | MS.gene21109:intron | 10.0% |
| !! | TAATATTTCTCTATTATAAG+TGG | - | 10911:11905-11924 | MS.gene21109:intron | 15.0% |
| !! | TTGTCAATTATTTATTAGTT+GGG | - | 10911:13891-13910 | MS.gene21109:intron | 15.0% |
| !! | TTGTTAAAAAAAAAAACACA+AGG | + | 10911:14846-14865 | None:intergenic | 15.0% |
| !! | TTTCATAAAGAATATAAATG+AGG | + | 10911:12693-12712 | None:intergenic | 15.0% |
| !!! | AAAAAATACTAACTTTAAGA+TGG | + | 10911:11366-11385 | None:intergenic | 15.0% |
| !!! | AATTCATATAATTTGTAGAA+CGG | + | 10911:13443-13462 | None:intergenic | 15.0% |
| !!! | ACGTTAATTTGATTAATTAT+TGG | + | 10911:10915-10934 | None:intergenic | 15.0% |
| !!! | ATTTGGTAAAAACTATTTTA+GGG | + | 10911:14215-14234 | None:intergenic | 15.0% |
| !!! | GTAATAATTGTCATTTTTTT+TGG | - | 10911:13252-13271 | MS.gene21109:intron | 15.0% |
| !!! | TATTTGGTAAAAACTATTTT+AGG | + | 10911:14216-14235 | None:intergenic | 15.0% |
| !!! | TTCAATTTTGAATGAAAAAA+TGG | - | 10911:14612-14631 | MS.gene21109:CDS | 15.0% |
| !!! | TTTTTTTTTTATACATCACA+TGG | - | 10911:12878-12897 | MS.gene21109:intron | 15.0% |
| !! | AAAGAATATAAATGAGGTAA+AGG | + | 10911:12687-12706 | None:intergenic | 20.0% |
| !! | AATCTATAATGAAAGAATCA+GGG | + | 10911:12649-12668 | None:intergenic | 20.0% |
| !! | ATTTGGTTAACAGTTTAATA+AGG | + | 10911:14241-14260 | None:intergenic | 20.0% |
| !! | GTTGTCAATTATTTATTAGT+TGG | - | 10911:13890-13909 | MS.gene21109:intron | 20.0% |
| !! | TAATCTATAATGAAAGAATC+AGG | + | 10911:12650-12669 | None:intergenic | 20.0% |
| !! | TAGAAGAAAACAATTGTAAT+AGG | - | 10911:13915-13934 | MS.gene21109:intron | 20.0% |
| !! | TTAAAAAACAAAGATACCAA+TGG | + | 10911:12338-12357 | None:intergenic | 20.0% |
| !!! | ATATTCTTTAGAATACATTG+TGG | - | 10911:13959-13978 | MS.gene21109:CDS | 20.0% |
| !!! | ATTAAGTTGTTTATCAAAAC+AGG | + | 10911:11513-11532 | None:intergenic | 20.0% |
| !!! | ATTCATTGATAACTAAATCA+AGG | + | 10911:14955-14974 | None:intergenic | 20.0% |
| !!! | CACTTCATAAATTTTACATT+AGG | - | 10911:10877-10896 | MS.gene21109:CDS | 20.0% |
| !!! | TTAAGTTGTTTATCAAAACA+GGG | + | 10911:11512-11531 | None:intergenic | 20.0% |
| !!! | TTTCATTTTTCTGTTTGTTT+GGG | + | 10911:14675-14694 | None:intergenic | 20.0% |
| ! | AAAAATCAGTGATGTCTTAA+TGG | - | 10911:12432-12451 | MS.gene21109:intron | 25.0% |
| ! | AAAATCAGTGATGTCTTAAT+GGG | - | 10911:12433-12452 | MS.gene21109:intron | 25.0% |
| ! | AAAGCAAATGGAAAATTGAA+AGG | + | 10911:12844-12863 | None:intergenic | 25.0% |
| ! | AAAGTTACTTGCAATCAAAA+GGG | - | 10911:13710-13729 | MS.gene21109:intron | 25.0% |
| ! | AAATACACCCATAATAAAGT+AGG | - | 10911:14283-14302 | MS.gene21109:intron | 25.0% |
| ! | AATAAAGTAGGAGCTATAAT+AGG | - | 10911:14295-14314 | MS.gene21109:intron | 25.0% |
| ! | ACAGTTTAATAAGGTGTATT+TGG | + | 10911:14232-14251 | None:intergenic | 25.0% |
| ! | AGTATAAAAGTAATCATCCA+AGG | - | 10911:13126-13145 | MS.gene21109:intron | 25.0% |
| ! | CAAACAAACAGAAAAATGAA+AGG | - | 10911:14674-14693 | MS.gene21109:CDS | 25.0% |
| ! | CTTAATGTAATGTGGTATAT+GGG | + | 10911:13502-13521 | None:intergenic | 25.0% |
| ! | GAAAAATATTGAAGAAACTG+AGG | - | 10911:12484-12503 | MS.gene21109:intron | 25.0% |
| ! | GATAATGTTATTGCTTTCTT+TGG | + | 10911:13780-13799 | None:intergenic | 25.0% |
| ! | TACTTTATTATGGGTGTATT+TGG | + | 10911:14284-14303 | None:intergenic | 25.0% |
| ! | TATAGCTCCTACTTTATTAT+GGG | + | 10911:14293-14312 | None:intergenic | 25.0% |
| ! | TCAAAAGTCGTTTATTTATG+AGG | + | 10911:14995-15014 | None:intergenic | 25.0% |
| ! | TCAATGAACTCATACATATT+GGG | + | 10911:11165-11184 | None:intergenic | 25.0% |
| ! | TGATAAAGTTGTATGAAACA+GGG | - | 10911:14328-14347 | MS.gene21109:intron | 25.0% |
| ! | TGATTAATCATGTCTAAACA+AGG | + | 10911:13529-13548 | None:intergenic | 25.0% |
| ! | TGGATTATATCATTGAGATT+GGG | + | 10911:12301-12320 | None:intergenic | 25.0% |
| ! | TTATAGCTCCTACTTTATTA+TGG | + | 10911:14294-14313 | None:intergenic | 25.0% |
| ! | TTCAATGAACTCATACATAT+TGG | + | 10911:11166-11185 | None:intergenic | 25.0% |
| ! | TTGATAAAGTTGTATGAAAC+AGG | - | 10911:14327-14346 | MS.gene21109:intron | 25.0% |
| !! | TTTTGATATTGCTTACACAA+GGG | + | 10911:13097-13116 | None:intergenic | 25.0% |
| !!! | AAGAAACAACTTTAGCTTTT+CGG | - | 10911:12260-12279 | MS.gene21109:intron | 25.0% |
| !!! | AATTTGTTCGATTTTCAAGT+AGG | - | 10911:14076-14095 | MS.gene21109:intron | 25.0% |
| !!! | ATTATTTTAAAAAGGTGCCT+TGG | + | 10911:13146-13165 | None:intergenic | 25.0% |
| !!! | CTTTCATTTTTCTGTTTGTT+TGG | + | 10911:14676-14695 | None:intergenic | 25.0% |
| !!! | GTTTTAATTAACTTGCAGTT+TGG | - | 10911:14577-14596 | MS.gene21109:intron | 25.0% |
| !!! | GTTTTAATTAACTTTCAGCT+TGG | + | 10911:12952-12971 | None:intergenic | 25.0% |
| !!! | TGGTATCTTTGTTTTTTAAG+TGG | - | 10911:12339-12358 | MS.gene21109:intron | 25.0% |
| !!! | TTTATCTTTTGTTGTAGAAG+CGG | + | 10911:11550-11569 | None:intergenic | 25.0% |
| AAACAACGAGAAAGAAAATC+AGG | - | 10911:10973-10992 | MS.gene21109:intron | 30.0% | |
| AACCAGAAAAAAATGTCTGA+GGG | + | 10911:13304-13323 | None:intergenic | 30.0% | |
| AACTAAGTACATTGCAAAAG+GGG | - | 10911:13008-13027 | MS.gene21109:intron | 30.0% | |
| AACTAGAGCTTAAACAACTA+AGG | - | 10911:13558-13577 | MS.gene21109:intron | 30.0% | |
| AAGGATACCTTAATGTAATG+TGG | + | 10911:13510-13529 | None:intergenic | 30.0% | |
| AATCCATCTATACATACACA+TGG | - | 10911:14144-14163 | MS.gene21109:intron | 30.0% | |
| AATTTGTCAAAACACTACGA+AGG | + | 10911:14918-14937 | None:intergenic | 30.0% | |
| AGAATAGCTCAACTGTTTAA+CGG | - | 10911:14884-14903 | MS.gene21109:CDS | 30.0% | |
| ATAAAGTTGTATGAAACAGG+GGG | - | 10911:14330-14349 | MS.gene21109:intron | 30.0% | |
| ATAGATGGTTTCAATCAATC+AGG | + | 10911:13624-13643 | None:intergenic | 30.0% | |
| ATATGAATGAATCAATGAGC+AGG | - | 10911:11227-11246 | MS.gene21109:intron | 30.0% | |
| ATGAATTCAATCATCAGCAA+CGG | - | 10911:13456-13475 | MS.gene21109:CDS | 30.0% | |
| ATGTGTATGTATAGATGGAT+TGG | + | 10911:14145-14164 | None:intergenic | 30.0% | |
| ATTGAAGCTGAAGATATAGA+TGG | + | 10911:13639-13658 | None:intergenic | 30.0% | |
| ATTGAGAAAGCCTATTCAAA+TGG | + | 10911:11748-11767 | None:intergenic | 30.0% | |
| CATTTGATCATAAGCTATTG+TGG | + | 10911:14176-14195 | None:intergenic | 30.0% | |
| CCATATACCACATTACATTA+AGG | - | 10911:13500-13519 | MS.gene21109:intron | 30.0% | |
| CCTTAATGTAATGTGGTATA+TGG | + | 10911:13503-13522 | None:intergenic | 30.0% | |
| CTGGATTATATCATTGAGAT+TGG | + | 10911:12302-12321 | None:intergenic | 30.0% | |
| CTTATCATAACTCATTTAGC+AGG | - | 10911:14459-14478 | MS.gene21109:intron | 30.0% | |
| CTTTCTCATATTTATTGCCA+TGG | - | 10911:12061-12080 | MS.gene21109:intron | 30.0% | |
| GAAAGTTACTTGCAATCAAA+AGG | - | 10911:13709-13728 | MS.gene21109:intron | 30.0% | |
| GAAATAGATACAGATTGAGT+TGG | + | 10911:13384-13403 | None:intergenic | 30.0% | |
| GAACTAAGTACATTGCAAAA+GGG | - | 10911:13007-13026 | MS.gene21109:intron | 30.0% | |
| GACCAATGGAATTACATTTA+GGG | + | 10911:12798-12817 | None:intergenic | 30.0% | |
| GATAAAGTTGTATGAAACAG+GGG | - | 10911:14329-14348 | MS.gene21109:intron | 30.0% | |
| GCAATTTGAGAAACAGAAAT+CGG | - | 10911:14417-14436 | MS.gene21109:intron | 30.0% | |
| GTAACCCTTGTAAAAGAAAA+GGG | + | 10911:11392-11411 | None:intergenic | 30.0% | |
| TAACCCTTGTAAAAGAAAAG+GGG | + | 10911:11391-11410 | None:intergenic | 30.0% | |
| TAAGAGTAAACAGATGCTTT+AGG | + | 10911:14785-14804 | None:intergenic | 30.0% | |
| TAGATGGTTTCAATCAATCA+GGG | + | 10911:13623-13642 | None:intergenic | 30.0% | |
| TATGAATGAATCAATGAGCA+GGG | - | 10911:11228-11247 | MS.gene21109:intron | 30.0% | |
| TATGCTGAAAAACTTAGAAG+AGG | - | 10911:12614-12633 | MS.gene21109:intron | 30.0% | |
| TCAAATACGTCCATTTGAAT+AGG | - | 10911:11735-11754 | MS.gene21109:intron | 30.0% | |
| TCCAAATTATTGTGTTTCGT+GGG | + | 10911:14819-14838 | None:intergenic | 30.0% | |
| TGACCAATGGAATTACATTT+AGG | + | 10911:12799-12818 | None:intergenic | 30.0% | |
| TGTAACCCTTGTAAAAGAAA+AGG | + | 10911:11393-11412 | None:intergenic | 30.0% | |
| TTCAAAATTGAAATCCACTC+TGG | + | 10911:14604-14623 | None:intergenic | 30.0% | |
| TTGACAATGTCTATCTAGTT+GGG | - | 10911:12179-12198 | MS.gene21109:intron | 30.0% | |
| TTTGACAATGTCTATCTAGT+TGG | - | 10911:12178-12197 | MS.gene21109:intron | 30.0% | |
| ! | AATTAGTTTGACATGGTTGT+GGG | + | 10911:13045-13064 | None:intergenic | 30.0% |
| ! | ACATACTTCTTGTTTGAGAT+TGG | + | 10911:14531-14550 | None:intergenic | 30.0% |
| ! | AGTGCTATTATAACATAGAG+GGG | + | 10911:13069-13088 | None:intergenic | 30.0% |
| ! | ATTTCTGTTTCTCAAATTGC+TGG | + | 10911:14417-14436 | None:intergenic | 30.0% |
| ! | CTCTCTTCCTTTAATGTTTT+GGG | - | 10911:13403-13422 | MS.gene21109:CDS | 30.0% |
| ! | GAATTACATTTAGGGAGTTT+TGG | + | 10911:12790-12809 | None:intergenic | 30.0% |
| ! | GAGTGCTATTATAACATAGA+GGG | + | 10911:13070-13089 | None:intergenic | 30.0% |
| ! | TAATTAGTTTGACATGGTTG+TGG | + | 10911:13046-13065 | None:intergenic | 30.0% |
| ! | TAGATTAACCTCTGGTTTAT+AGG | - | 10911:11479-11498 | MS.gene21109:intron | 30.0% |
| ! | TATAATTTGTAGAACGGTGT+TGG | + | 10911:13437-13456 | None:intergenic | 30.0% |
| ! | TATGAGAAAGCATACTCTAT+TGG | + | 10911:12051-12070 | None:intergenic | 30.0% |
| ! | TCTCTCTTCCTTTAATGTTT+TGG | - | 10911:13402-13421 | MS.gene21109:CDS | 30.0% |
| ! | TGTGTATGTATAGATGGATT+GGG | + | 10911:14144-14163 | None:intergenic | 30.0% |
| ! | TTGGATGTTTTCCTTTCTTA+CGG | + | 10911:12771-12790 | None:intergenic | 30.0% |
| !! | AGTTGCTTGTTTCTAACTAT+AGG | + | 10911:12236-12255 | None:intergenic | 30.0% |
| !! | ATACTAACTTTAAGATGGTC+AGG | + | 10911:11361-11380 | None:intergenic | 30.0% |
| !! | ATTTTCTTTCTCGTTGTTTC+TGG | + | 10911:10972-10991 | None:intergenic | 30.0% |
| !! | CTTATTTTCATAAACTCTCC+AGG | + | 10911:11623-11642 | None:intergenic | 30.0% |
| !! | GAAAAATGAAAGGCATTTGA+TGG | - | 10911:14684-14703 | MS.gene21109:CDS | 30.0% |
| !! | GAAAATTGAAAGGCATTTGA+CGG | + | 10911:12834-12853 | None:intergenic | 30.0% |
| !! | GACAAGGTATTTGATTTTCT+AGG | + | 10911:13686-13705 | None:intergenic | 30.0% |
| !! | GTATTTGATTTTCTAGGAGT+TGG | + | 10911:13680-13699 | None:intergenic | 30.0% |
| !! | GTTTTGATATTGCTTACACA+AGG | + | 10911:13098-13117 | None:intergenic | 30.0% |
| !! | TACTAACTTTAAGATGGTCA+GGG | + | 10911:11360-11379 | None:intergenic | 30.0% |
| !! | TATAGATGGATTGGGTATTT+AGG | + | 10911:14136-14155 | None:intergenic | 30.0% |
| !! | TTTTTGGTCAGTAATTGGAA+TGG | + | 10911:15040-15059 | None:intergenic | 30.0% |
| !!! | ACAACATATGTCACTTTTAG+GGG | + | 10911:12737-12756 | None:intergenic | 30.0% |
| !!! | GACAACATATGTCACTTTTA+GGG | + | 10911:12738-12757 | None:intergenic | 30.0% |
| !!! | TCTTTGTTTTTTAAGTGGAG+TGG | - | 10911:12344-12363 | MS.gene21109:intron | 30.0% |
| !!! | TGACAACATATGTCACTTTT+AGG | + | 10911:12739-12758 | None:intergenic | 30.0% |
| !!! | TTGCATTTTTGGTCAGTAAT+TGG | + | 10911:15045-15064 | None:intergenic | 30.0% |
| AACCCTTGTAAAAGAAAAGG+GGG | + | 10911:11390-11409 | None:intergenic | 35.0% | |
| AACGTGTAACAGATTAGCAT+TGG | - | 10911:10930-10949 | MS.gene21109:intron | 35.0% | |
| AATCAGCACTGTAACTTGAT+GGG | + | 10911:12574-12593 | None:intergenic | 35.0% | |
| ACGTATTTGACCTTATCTAC+TGG | + | 10911:11725-11744 | None:intergenic | 35.0% | |
| ACTCCATGTGTATGTATAGA+TGG | + | 10911:14150-14169 | None:intergenic | 35.0% | |
| CTCCCTAAATGTAATTCCAT+TGG | - | 10911:12793-12812 | MS.gene21109:intron | 35.0% | |
| GAACCAGAAAAAAATGTCTG+AGG | + | 10911:13305-13324 | None:intergenic | 35.0% | |
| GAATAGGCTTTCTCAATTGA+AGG | - | 10911:11751-11770 | MS.gene21109:intron | 35.0% | |
| GCAAGTAACTTTCTTTGACA+AGG | + | 10911:13702-13721 | None:intergenic | 35.0% | |
| GGAACTAAGTACATTGCAAA+AGG | - | 10911:13006-13025 | MS.gene21109:intron | 35.0% | |
| GTACAAAGATAGAAGTCAAC+AGG | - | 10911:15089-15108 | MS.gene21109:intron | 35.0% | |
| GTCCAAATTATTGTGTTTCG+TGG | + | 10911:14820-14839 | None:intergenic | 35.0% | |
| GTGTGTATAACCATAGTAAG+TGG | - | 10911:13732-13751 | MS.gene21109:intron | 35.0% | |
| TAATCAGCACTGTAACTTGA+TGG | + | 10911:12575-12594 | None:intergenic | 35.0% | |
| TACTTCTCCTTGTTCAAAAC+TGG | - | 10911:12973-12992 | MS.gene21109:intron | 35.0% | |
| TCCATTTGCTTTGTCTGAAA+TGG | - | 10911:12852-12871 | MS.gene21109:intron | 35.0% | |
| TCTCAATTGAAGGAAGTGAA+TGG | - | 10911:11761-11780 | MS.gene21109:intron | 35.0% | |
| TCTTAGTCATGTAGTCAGTA+GGG | - | 10911:14101-14120 | MS.gene21109:intron | 35.0% | |
| TGAAACGCTCTAACATGAAT+TGG | + | 10911:15191-15210 | None:intergenic | 35.0% | |
| TGACAATGTCTATCTAGTTG+GGG | - | 10911:12180-12199 | MS.gene21109:intron | 35.0% | |
| TTCTTAGTCATGTAGTCAGT+AGG | - | 10911:14100-14119 | MS.gene21109:intron | 35.0% | |
| TTTATGTTGCTCGTACTTTG+TGG | - | 10911:12378-12397 | MS.gene21109:intron | 35.0% | |
| ! | AACTAGGTGCATTTTGCAAT+TGG | + | 10911:13824-13843 | None:intergenic | 35.0% |
| ! | ATTAGTTTGACATGGTTGTG+GGG | + | 10911:13044-13063 | None:intergenic | 35.0% |
| ! | CGAGTGCTATTATAACATAG+AGG | + | 10911:13071-13090 | None:intergenic | 35.0% |
| ! | CTGCAAATTGGTTGCATTTT+TGG | + | 10911:15056-15075 | None:intergenic | 35.0% |
| ! | TAACATGAATTGGTCTGTTG+CGG | + | 10911:15181-15200 | None:intergenic | 35.0% |
| ! | TGGATGTTTTCCTTTCTTAC+GGG | + | 10911:12770-12789 | None:intergenic | 35.0% |
| ! | TTCCCCCTTTTCTTTTACAA+GGG | - | 10911:11385-11404 | MS.gene21109:intron | 35.0% |
| ! | TTTCCCCCTTTTCTTTTACA+AGG | - | 10911:11384-11403 | MS.gene21109:intron | 35.0% |
| !! | CAAAAGTATCCTGAAGAACA+AGG | + | 10911:11113-11132 | None:intergenic | 35.0% |
| !! | TTTGATTTTCTAGGAGTTGG+AGG | + | 10911:13677-13696 | None:intergenic | 35.0% |
| !!! | TTTCTCTTTTTTACCTGACG+AGG | + | 10911:11976-11995 | None:intergenic | 35.0% |
| AAAAGCTTCTGCAGGAAAAG+AGG | - | 10911:12513-12532 | MS.gene21109:intron | 40.0% | |
| AATTGAAACCCACTCTAGCA+AGG | - | 10911:12925-12944 | MS.gene21109:intron | 40.0% | |
| AGTGCTTATGCCAGTAGATA+AGG | - | 10911:11712-11731 | MS.gene21109:intron | 40.0% | |
| ATATTTATTGCCATGGCCCA+TGG | - | 10911:12068-12087 | MS.gene21109:intron | 40.0% | |
| ATTTAGCAGGTTAACGTAGC+TGG | - | 10911:14472-14491 | MS.gene21109:intron | 40.0% | |
| CAATGGCAAGATGAATCATC+TGG | + | 10911:12321-12340 | None:intergenic | 40.0% | |
| CAGAAAAAAATGTCTGAGGG+TGG | + | 10911:13301-13320 | None:intergenic | 40.0% | |
| CAGAAGAAAGCTCTACACAA+TGG | - | 10911:11998-12017 | MS.gene21109:intron | 40.0% | |
| CAGATGATTCATCTTGCCAT+TGG | - | 10911:12319-12338 | MS.gene21109:intron | 40.0% | |
| CAGGAATTAGCTAAGAAGAG+AGG | - | 10911:11265-11284 | MS.gene21109:intron | 40.0% | |
| CAGGGTTAAGTATATTGAGC+AGG | - | 10911:11246-11265 | MS.gene21109:intron | 40.0% | |
| CGAAGTCTTTCCACTTACTA+TGG | + | 10911:13745-13764 | None:intergenic | 40.0% | |
| CGTTGTTTGGTTGAGATTGT+GGG | + | 10911:10814-10833 | None:intergenic | 40.0% | |
| CTGAGATTGCTGTAAAGTGA+GGG | + | 10911:11010-11029 | None:intergenic | 40.0% | |
| CTGTCAGCCCAAAACATTAA+AGG | + | 10911:13413-13432 | None:intergenic | 40.0% | |
| CTTCTATCTTTGTACAGCTC+AGG | + | 10911:15084-15103 | None:intergenic | 40.0% | |
| CTTGTTCAAAACTGGAAGCA+GGG | - | 10911:12981-13000 | MS.gene21109:intron | 40.0% | |
| GCCATTTCAGACAAAGCAAA+TGG | + | 10911:12856-12875 | None:intergenic | 40.0% | |
| GCCCACGAAACACAATAATT+TGG | - | 10911:14815-14834 | MS.gene21109:CDS | 40.0% | |
| GTCAAACTCCTATAAACCAG+AGG | + | 10911:11490-11509 | None:intergenic | 40.0% | |
| GTGCAGTTTAGATTAACCTC+TGG | - | 10911:11471-11490 | MS.gene21109:intron | 40.0% | |
| GTTCTGTTGGAGTTCTCTTT+CGG | + | 10911:10778-10797 | None:intergenic | 40.0% | |
| GTTGTTTGGTTGAGATTGTG+GGG | + | 10911:10813-10832 | None:intergenic | 40.0% | |
| TAAGGATGACCTTGTTCTTC+AGG | - | 10911:11101-11120 | MS.gene21109:intron | 40.0% | |
| TAAGTACATTGCAAAAGGGG+CGG | - | 10911:13011-13030 | MS.gene21109:intron | 40.0% | |
| TATTTATTGCCATGGCCCAT+GGG | - | 10911:12069-12088 | MS.gene21109:intron | 40.0% | |
| TCGTTGTTTGGTTGAGATTG+TGG | + | 10911:10815-10834 | None:intergenic | 40.0% | |
| TGATATTGCTTACACAAGGG+TGG | + | 10911:13094-13113 | None:intergenic | 40.0% | |
| TGGCCGAAAAAAATGTCTGA+GGG | + | 10911:13281-13300 | None:intergenic | 40.0% | |
| TTGCAATTGGTTGGAGCAAA+TGG | + | 10911:13811-13830 | None:intergenic | 40.0% | |
| TTGTAGAAGCGGCTTATTGT+CGG | + | 10911:11539-11558 | None:intergenic | 40.0% | |
| TTTAGGCCCTAAAAGTGACT+CGG | + | 10911:14768-14787 | None:intergenic | 40.0% | |
| ! | AGGTGCATTTTGCAATTGGT+TGG | + | 10911:13820-13839 | None:intergenic | 40.0% |
| ! | CATAAGCACTTGTGACTTGT+GGG | + | 10911:11702-11721 | None:intergenic | 40.0% |
| ! | CTTTTCCTGCAGAAGCTTTT+TGG | + | 10911:12513-12532 | None:intergenic | 40.0% |
| ! | GAGGGGTAATTAGTTTGACA+TGG | + | 10911:13052-13071 | None:intergenic | 40.0% |
| ! | GGATGTTTTCCTTTCTTACG+GGG | + | 10911:12769-12788 | None:intergenic | 40.0% |
| ! | TTTCGGTAGTTTTTCCTTCG+CGG | + | 10911:10761-10780 | None:intergenic | 40.0% |
| !! | ACTTTTAGGGGCTTAAGTGA+AGG | + | 10911:12725-12744 | None:intergenic | 40.0% |
| !! | ATTGAAAGGCATTTGACGGA+AGG | + | 10911:12830-12849 | None:intergenic | 40.0% |
| !! | TTGAAAGGCATTTGACGGAA+GGG | + | 10911:12829-12848 | None:intergenic | 40.0% |
| !!! | ATGACACCGAGTCACTTTTA+GGG | - | 10911:14759-14778 | MS.gene21109:intron | 40.0% |
| !!! | CACCCTCAGACATTTTTTTC+TGG | - | 10911:13276-13295 | MS.gene21109:intron | 40.0% |
| !!! | CCACCCTCAGACATTTTTTT+CGG | - | 10911:13275-13294 | MS.gene21109:intron | 40.0% |
| !!! | GCTGTTTTTATAAGCGAACC+TGG | - | 10911:11602-11621 | MS.gene21109:intron | 40.0% |
| !!! | TATGACACCGAGTCACTTTT+AGG | - | 10911:14758-14777 | MS.gene21109:intron | 40.0% |
| AAAACATCAGCCTTCCAGTC+AGG | + | 10911:13332-13351 | None:intergenic | 45.0% | |
| AAACATCAGCCTTCCAGTCA+GGG | + | 10911:13331-13350 | None:intergenic | 45.0% | |
| ACTTTACAGCAATCTCAGCC+TGG | - | 10911:11012-11031 | MS.gene21109:intron | 45.0% | |
| AGCTCTACACAATGGACAAC+TGG | - | 10911:12006-12025 | MS.gene21109:intron | 45.0% | |
| CAGGAAAAGAGGCTTATGGT+GGG | - | 10911:12524-12543 | MS.gene21109:intron | 45.0% | |
| CCGAAAAAAATGTCTGAGGG+TGG | + | 10911:13278-13297 | None:intergenic | 45.0% | |
| CCTTCTTTCGCTTTCGTCAT+CGG | + | 10911:10840-10859 | None:intergenic | 45.0% | |
| CCTTGTTCAAAACTGGAAGC+AGG | - | 10911:12980-12999 | MS.gene21109:intron | 45.0% | |
| CTAACAGCAACTTTGCCCAT+GGG | + | 10911:12087-12106 | None:intergenic | 45.0% | |
| GAAGGGACGAAAATGACCAA+TGG | + | 10911:12812-12831 | None:intergenic | 45.0% | |
| GCATAAGCACTTGTGACTTG+TGG | + | 10911:11703-11722 | None:intergenic | 45.0% | |
| GCCGGTATCGTTCTTATCAA+CGG | + | 10911:11064-11083 | None:intergenic | 45.0% | |
| GCTCAGGATGTTCTGCAAAT+TGG | + | 10911:15068-15087 | None:intergenic | 45.0% | |
| GCTGAGATTGCTGTAAAGTG+AGG | + | 10911:11011-11030 | None:intergenic | 45.0% | |
| GGGATCTTCATCCAAAACAG+CGG | + | 10911:11145-11164 | None:intergenic | 45.0% | |
| GGGTTAATCGTCTTGCAGAA+TGG | + | 10911:13603-13622 | None:intergenic | 45.0% | |
| GTGGCCGAAAAAAATGTCTG+AGG | + | 10911:13282-13301 | None:intergenic | 45.0% | |
| TCGTCATCGGAATCGTTGTT+TGG | + | 10911:10827-10846 | None:intergenic | 45.0% | |
| TCTAACAGCAACTTTGCCCA+TGG | + | 10911:12088-12107 | None:intergenic | 45.0% | |
| TCTGCAGGAAAAGAGGCTTA+TGG | - | 10911:12520-12539 | MS.gene21109:intron | 45.0% | |
| TGAGAAACAGAAATCGGCAG+TGG | - | 10911:14423-14442 | MS.gene21109:intron | 45.0% | |
| TGATTATTTCCAGCGTGGCA+GGG | - | 10911:12589-12608 | MS.gene21109:intron | 45.0% | |
| TGTAAATCTTGTGCCTCGTC+AGG | - | 10911:11960-11979 | MS.gene21109:intron | 45.0% | |
| TTCAAAACTGGAAGCAGGGA+TGG | - | 10911:12985-13004 | MS.gene21109:intron | 45.0% | |
| TTGGTTGAGATTGTGGGGAT+TGG | + | 10911:10808-10827 | None:intergenic | 45.0% | |
| ! | GATTGGTCGCATTGTTCTGT+TGG | + | 10911:10791-10810 | None:intergenic | 45.0% |
| ! | GCCGTTGATAAGAACGATAC+CGG | - | 10911:11060-11079 | MS.gene21109:intron | 45.0% |
| ! | GTTGATAAGAACGATACCGG+CGG | - | 10911:11063-11082 | MS.gene21109:intron | 45.0% |
| ! | TGCTCAAGAAACCGCTGTTT+TGG | - | 10911:11131-11150 | MS.gene21109:intron | 45.0% |
| !! | ACTGCTGGACTCGTTTTGTT+TGG | + | 10911:15130-15149 | None:intergenic | 45.0% |
| !! | AGTGCTGATTATTTCCAGCG+TGG | - | 10911:12584-12603 | MS.gene21109:intron | 45.0% |
| !! | TTAGTTTCTAGCAGCTCAGC+TGG | - | 10911:11436-11455 | MS.gene21109:intron | 45.0% |
| !!! | CCTGCTTCCAGTTTTGAACA+AGG | + | 10911:12983-13002 | None:intergenic | 45.0% |
| !!! | ACTAAAATATTATTTTAAAA+AGG | + | 10911:13154-13173 | None:intergenic | 5.0% |
| AACGAGAACGTCACCGTGTT+CGG | - | 10911:15214-15233 | MS.gene21109:CDS | 50.0% | |
| ACTTGCAGTTTGGTCCAGAG+TGG | - | 10911:14587-14606 | MS.gene21109:intron | 50.0% | |
| AGCTTGGTCCTTGCTAGAGT+GGG | + | 10911:12936-12955 | None:intergenic | 50.0% | |
| CATACTGCTCCCCGTAAGAA+AGG | - | 10911:12757-12776 | MS.gene21109:intron | 50.0% | |
| CCGATGACGAAAGCGAAAGA+AGG | - | 10911:10837-10856 | MS.gene21109:CDS | 50.0% | |
| CTGATTATTTCCAGCGTGGC+AGG | - | 10911:12588-12607 | MS.gene21109:intron | 50.0% | |
| GCAGGAAAAGAGGCTTATGG+TGG | - | 10911:12523-12542 | MS.gene21109:intron | 50.0% | |
| GCTAAACCGCTGGAAATTCC+AGG | + | 10911:11033-11052 | None:intergenic | 50.0% | |
| GCTGTAAAGTGAGGGTTGCA+GGG | + | 10911:11002-11021 | None:intergenic | 50.0% | |
| TCTCAGCCTGGAATTTCCAG+CGG | - | 10911:11024-11043 | MS.gene21109:intron | 50.0% | |
| TGCTGTAAAGTGAGGGTTGC+AGG | + | 10911:11003-11022 | None:intergenic | 50.0% | |
| ATCAGCCTTCCAGTCAGGGA+CGG | + | 10911:13327-13346 | None:intergenic | 55.0% | |
| ATGCTCCTGGAGCAGTACAG+AGG | - | 10911:15151-15170 | MS.gene21109:CDS | 55.0% | |
| CAGCTTGGTCCTTGCTAGAG+TGG | + | 10911:12937-12956 | None:intergenic | 55.0% | |
| CGAAACAAGAGAAGCCGCGA+AGG | - | 10911:10744-10763 | MS.gene21109:CDS | 55.0% | |
| GATAAGAACGATACCGGCGG+TGG | - | 10911:11066-11085 | MS.gene21109:intron | 55.0% | |
| GGCTGCCAAAAAGCTTCTGC+AGG | - | 10911:12505-12524 | MS.gene21109:intron | 55.0% | |
| ! | GGCTTTAGCAGCTAAACCGC+TGG | + | 10911:11043-11062 | None:intergenic | 55.0% |
| !! | GTTTCTAGCAGCTCAGCTGG+TGG | - | 10911:11439-11458 | MS.gene21109:intron | 55.0% |
| !! | TTTCTGGTTCCGTCCCTGAC+TGG | - | 10911:13315-13334 | MS.gene21109:intron | 55.0% |
| CAGCATAATCCCTGCCACGC+TGG | + | 10911:12601-12620 | None:intergenic | 60.0% | |
| CGGTGGCGATGGAGCTGATA+AGG | - | 10911:11083-11102 | MS.gene21109:intron | 60.0% | |
| GAGTCCAGCAGTGATGCTCC+TGG | - | 10911:15138-15157 | MS.gene21109:CDS | 60.0% | |
| GCAACTTTGCCCATGGGCCA+TGG | + | 10911:12081-12100 | None:intergenic | 60.0% | |
| TCCTGGAGCAGTACAGAGGC+AGG | - | 10911:15155-15174 | MS.gene21109:CDS | 60.0% | |
| TGGTTCCGTCCCTGACTGGA+AGG | - | 10911:13319-13338 | MS.gene21109:intron | 60.0% | |
| !! | TGCTCCAGGAGCATCACTGC+TGG | + | 10911:15145-15164 | None:intergenic | 60.0% |
| AACGATACCGGCGGTGGCGA+TGG | - | 10911:11072-11091 | MS.gene21109:intron | 65.0% | |
| ATCAGCTCCATCGCCACCGC+CGG | + | 10911:11082-11101 | None:intergenic | 65.0% | |
| GCCTGCCTCTGTACTGCTCC+AGG | + | 10911:15159-15178 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10911 | gene | 10734 | 15242 | 10734 | ID=MS.gene21109 |
| 10911 | mRNA | 10734 | 15242 | 10734 | ID=MS.gene21109.t1;Parent=MS.gene21109 |
| 10911 | exon | 15118 | 15242 | 15118 | ID=MS.gene21109.t1.exon1;Parent=MS.gene21109.t1 |
| 10911 | CDS | 15118 | 15242 | 15118 | ID=cds.MS.gene21109.t1;Parent=MS.gene21109.t1 |
| 10911 | exon | 14807 | 15034 | 14807 | ID=MS.gene21109.t1.exon2;Parent=MS.gene21109.t1 |
| 10911 | CDS | 14807 | 15034 | 14807 | ID=cds.MS.gene21109.t1;Parent=MS.gene21109.t1 |
| 10911 | exon | 14604 | 14727 | 14604 | ID=MS.gene21109.t1.exon3;Parent=MS.gene21109.t1 |
| 10911 | CDS | 14604 | 14727 | 14604 | ID=cds.MS.gene21109.t1;Parent=MS.gene21109.t1 |
| 10911 | exon | 13921 | 13994 | 13921 | ID=MS.gene21109.t1.exon4;Parent=MS.gene21109.t1 |
| 10911 | CDS | 13921 | 13994 | 13921 | ID=cds.MS.gene21109.t1;Parent=MS.gene21109.t1 |
| 10911 | exon | 13341 | 13501 | 13341 | ID=MS.gene21109.t1.exon5;Parent=MS.gene21109.t1 |
| 10911 | CDS | 13341 | 13501 | 13341 | ID=cds.MS.gene21109.t1;Parent=MS.gene21109.t1 |
| 10911 | exon | 10734 | 10900 | 10734 | ID=MS.gene21109.t1.exon6;Parent=MS.gene21109.t1 |
| 10911 | CDS | 10734 | 10900 | 10734 | ID=cds.MS.gene21109.t1;Parent=MS.gene21109.t1 |
| Gene Sequence |
| Protein sequence |
