AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 191 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCACATGTATATTATTAT+TGG 0.174446 7.1:+8226068 MS.gene22470:CDS
TCTAACATACCGGTTGAATT+TGG 0.203406 7.1:+8224453 MS.gene22470:CDS
GAAAGTTTCACTGATGAAAT+TGG 0.210723 7.1:+8223690 MS.gene22470:CDS
AATATTGAAGAAAATGCTTT+TGG 0.239099 7.1:+8224601 MS.gene22470:CDS
CTTTACATTGAAATTATTCT+TGG 0.248193 7.1:-8225086 None:intergenic
AGAATCGGTTCTGGTGGTTT+TGG 0.248700 7.1:+8226389 MS.gene22470:CDS
ACAATAGCCTTGCTAATTTC+AGG 0.250122 7.1:-8224577 None:intergenic
TTGAATTTGGATGGGTTTCC+TGG 0.251437 7.1:+8224466 MS.gene22470:CDS
TCCTTCAGATATTACCAAAA+TGG 0.251706 7.1:+8225251 MS.gene22470:CDS
ACTCTCAAGGAACATCTTTA+TGG 0.252804 7.1:+8226723 MS.gene22470:CDS
TTCAACCAAACCAACCATTT+TGG 0.260196 7.1:-8225265 None:intergenic
TGGTGCTTCTGTTCTACTTT+TGG 0.267559 7.1:+8226100 MS.gene22470:CDS
GGGTGTCTTGGCAAATTTAA+AGG 0.268031 7.1:-8224680 None:intergenic
GTAGGACAAGGTACCTATTA+AGG 0.271452 7.1:+8223856 MS.gene22470:CDS
ACCGAAACTTTCATTCGATA+TGG 0.288809 7.1:-8227408 None:intergenic
GTCTCTGCAAGGATCAATTT+TGG 0.289396 7.1:+8224146 MS.gene22470:CDS
CCAACAGAAATGTCAAATTT+AGG 0.289616 7.1:-8223921 None:intergenic
TCTTGTTTGGTTATACATAA+AGG 0.291488 7.1:+8226134 MS.gene22470:CDS
GGCTACTGTTATATCTTGTT+TGG 0.294173 7.1:+8226121 MS.gene22470:CDS
TTTGCAGTTGAAGCTATTTC+CGG 0.295534 7.1:+8224963 MS.gene22470:intron
AGAGCCAAGGTTTCAGATTT+CGG 0.297535 7.1:+8227090 MS.gene22470:CDS
ATTCTTCTTGAACTCATATC+TGG 0.299193 7.1:+8227377 MS.gene22470:CDS
GACTCCATCAACAGCAAGTT+TGG 0.300494 7.1:-8227118 None:intergenic
CTTTCCAAACTTGCTGTTGA+TGG 0.300987 7.1:+8227114 MS.gene22470:CDS
GTTCAAAATAATATGTTATC+TGG 0.306339 7.1:+8225772 MS.gene22470:CDS
CTGATGAAATTGGACTTGAT+TGG 0.316439 7.1:+8223700 MS.gene22470:CDS
CTACTCAAAGGCCGGCTTCT+TGG 0.319110 7.1:+8226288 MS.gene22470:CDS
AGATAGCAGTTAAAGTTCTA+AGG 0.333488 7.1:+8226447 MS.gene22470:CDS
CGGTGTGCTACCGGCCTCTT+TGG 0.334870 7.1:+8225550 MS.gene22470:CDS
TTAAGGGCCTCTTTCTTGTA+TGG 0.339118 7.1:+8223873 MS.gene22470:CDS
ACAAGAAAGAGGCCCTTAAT+AGG 0.339143 7.1:-8223869 None:intergenic
CTCACTATTCTTCAGCAAAC+TGG 0.343245 7.1:+8224994 MS.gene22470:CDS
CCTGATAATAAGCTTACTTA+TGG 0.345460 7.1:+8223726 MS.gene22470:CDS
AGAAACTTGGTACAACTTCT+TGG 0.347697 7.1:+8226645 MS.gene22470:CDS
ATGGGTTTCCTGGCAATGCT+TGG 0.358898 7.1:+8224476 MS.gene22470:CDS
GACACTTTCCTGCTGATTCC+AGG 0.361942 7.1:+8223805 MS.gene22470:CDS
GACTCCCAAATTCTATCAAA+AGG 0.362259 7.1:-8224286 None:intergenic
TATTACCAAAATGGTTGGTT+TGG 0.370589 7.1:+8225260 MS.gene22470:CDS
AGTTCAAGCGTAGATATAAA+AGG 0.373012 7.1:-8224065 None:intergenic
TGTGGTGGCAGCTTGTTATC+CGG 0.376847 7.1:+8225207 MS.gene22470:intron
ATCCATTGAACCTATGTTCA+TGG 0.379699 7.1:-8227791 None:intergenic
TTTAATGCAAGTTACCTCAT+TGG 0.386579 7.1:-8226501 None:intergenic
CCATAAGTAAGCTTATTATC+AGG 0.390274 7.1:-8223726 None:intergenic
TTGCTAATTTCAGGCTGGCC+TGG 0.390823 7.1:-8224568 None:intergenic
GAATACTATTCTCTTCTTCT+CGG 0.392385 7.1:-8226674 None:intergenic
CAAACGAGTCTAGAAAATTC+AGG 0.396943 7.1:+8224536 MS.gene22470:CDS
TGGGTTTCCTGGCAATGCTT+GGG 0.398084 7.1:+8224477 MS.gene22470:CDS
TACAAAAGGTAGGGATAGAT+TGG 0.400912 7.1:-8224653 None:intergenic
GAAATATCGCCTTTATGAAC+CGG 0.402785 7.1:+8224624 MS.gene22470:CDS
ATTGAAATTATTCTTGGTTG+TGG 0.403247 7.1:-8225080 None:intergenic
CACCCGGTAAAATCTGGTAT+TGG 0.405546 7.1:-8225408 None:intergenic
CGCATTTACGAGAGGTCCCT+TGG 0.406497 7.1:-8224710 None:intergenic
AAGACCGAAATCTGAAACCT+TGG 0.416175 7.1:-8227094 None:intergenic
CTTGAACTTCGACAATTCAA+TGG 0.418526 7.1:+8224080 MS.gene22470:CDS
CACTCTTGTCAGTTAACTGT+TGG 0.418843 7.1:-8227334 None:intergenic
AAGAGTGATGTTTATAGCTT+CGG 0.424079 7.1:+8227350 MS.gene22470:CDS
GAACTCGCGTTTGCCTTGAT+AGG 0.425951 7.1:-8226477 None:intergenic
TATCTTGTTGATGTTGCTGC+TGG 0.426913 7.1:+8224331 MS.gene22470:CDS
GAAACTTGGTACAACTTCTT+GGG 0.427070 7.1:+8226646 MS.gene22470:CDS
TGTTTATCAAATGCAACAAC+TGG 0.430170 7.1:+8224038 MS.gene22470:CDS
ATTCTATCAAAAGGGTCATC+AGG 0.432265 7.1:-8224277 None:intergenic
ACCCGGTAAAATCTGGTATT+GGG 0.434608 7.1:-8225407 None:intergenic
TCACCCACTGGACTATGTTT+CGG 0.435276 7.1:-8227439 None:intergenic
AAGAGAAGATATTATGAGAA+AGG 0.437379 7.1:+8226158 MS.gene22470:CDS
AGCATGGGCGGAGTATCAAT+TGG 0.438173 7.1:+8226821 MS.gene22470:CDS
AAGCGTGTAGCAATATTTCC+TGG 0.441010 7.1:-8223823 None:intergenic
GTCTTCCTGTTCCATGGTCA+TGG 0.443300 7.1:+8225039 MS.gene22470:CDS
TTATTCTGCTTTGTTTGTGA+AGG 0.445106 7.1:-8226043 None:intergenic
TTCCATGAACATAGGTTCAA+TGG 0.446596 7.1:+8227789 MS.gene22470:CDS
TGGCGAACCTTCCGAGTTTG+AGG 0.448051 7.1:+8225570 MS.gene22470:CDS
TCCATGCACCCGGTAAAATC+TGG 0.451087 7.1:-8225414 None:intergenic
CCTAAATTTGACATTTCTGT+TGG 0.452651 7.1:+8223921 MS.gene22470:CDS
GGCGAACCTTCCGAGTTTGA+GGG 0.453579 7.1:+8225571 MS.gene22470:CDS
AACAACTTTGAGAAAAGAAT+CGG 0.454850 7.1:+8226374 MS.gene22470:CDS
TAAAGGAGAGTACAAAAGGT+AGG 0.457533 7.1:-8224663 None:intergenic
CTAAGGAATAATTCCTATCA+AGG 0.458368 7.1:+8226464 MS.gene22470:CDS
GTGTATGAGTTCATGCATAA+TGG 0.459131 7.1:+8226699 MS.gene22470:CDS
ACATACCGGTTGAATTTGGA+TGG 0.459232 7.1:+8224457 MS.gene22470:CDS
TAGGACAAGGTACCTATTAA+GGG 0.459392 7.1:+8223857 MS.gene22470:CDS
GAGAGGTCCCTTGGATGAAT+CGG 0.460818 7.1:-8224701 None:intergenic
CGGAGACTGATGCTCCAATC+AGG 0.460924 7.1:+8224171 MS.gene22470:CDS
ACAGCCGTAGTCGGTACAAA+TGG 0.463049 7.1:+8224427 MS.gene22470:CDS
TGGTAAATCCCGGTTCATAA+AGG 0.464775 7.1:-8224633 None:intergenic
CATGGATGCAGATGGCTTGA+TGG 0.465334 7.1:+8225369 MS.gene22470:intron
CGGATCCATGACCATGGAAC+AGG 0.466235 7.1:-8225044 None:intergenic
GCCATATCGAATGAAAGTTT+CGG 0.466797 7.1:+8227407 MS.gene22470:CDS
TTTGAGAAAAGAATCGGTTC+TGG 0.469496 7.1:+8226380 MS.gene22470:CDS
AACATAGGTTCAATGGATCT+TGG 0.469641 7.1:+8227796 MS.gene22470:CDS
ATTATTATTGGTTCAGCAGT+TGG 0.469696 7.1:+8226080 MS.gene22470:CDS
GCAGCAATATTCTTCTTGAC+AGG 0.471215 7.1:+8227061 MS.gene22470:CDS
TAAGGGCCTCTTTCTTGTAT+GGG 0.477081 7.1:+8223874 MS.gene22470:CDS
CTTGCAGGCTCTTTAGAGCA+TGG 0.478438 7.1:+8226805 MS.gene22470:intron
ATCCATGTCTTCCTGTTCCA+TGG 0.479303 7.1:+8225033 MS.gene22470:CDS
CTTGGATGAATCGGGTGTCT+TGG 0.481194 7.1:-8224692 None:intergenic
TTGCAGGCTCTTTAGAGCAT+GGG 0.483746 7.1:+8226806 MS.gene22470:intron
GCTGTCTGCATCACTTTCAC+TGG 0.489738 7.1:-8224409 None:intergenic
TCAGTTCAACGGTGTGCTAC+CGG 0.490900 7.1:+8225541 MS.gene22470:CDS
TTTCAGTCTTCCATGAACAT+AGG 0.491168 7.1:+8227781 MS.gene22470:CDS
AAGCAGTGAGCAGCTTCTGC+AGG 0.493733 7.1:-8226323 None:intergenic
ACTCTTGTCAGTTAACTGTT+GGG 0.499506 7.1:-8227333 None:intergenic
TCTCAATAGATATTGCATCT+TGG 0.502531 7.1:-8227705 None:intergenic
AAGAAGCCGGCCTTTGAGTA+GGG 0.504966 7.1:-8226286 None:intergenic
TTTAAAACTTCTGAAATCGA+TGG 0.505953 7.1:-8227676 None:intergenic
GGAATTATTGATCCATTGCT+AGG 0.507994 7.1:+8227574 MS.gene22470:CDS
TCAGATATTACCAAAATGGT+TGG 0.509222 7.1:+8225255 MS.gene22470:CDS
GTGGTGGCAGCTTGTTATCC+GGG 0.511203 7.1:+8225208 MS.gene22470:intron
AATGGATTAAGGTACCTGAT+TGG 0.512177 7.1:-8224185 None:intergenic
AATTTAAAGGAGAGTACAAA+AGG 0.514942 7.1:-8224667 None:intergenic
TGATCCTTGCAGAGACACTA+AGG 0.515724 7.1:-8224139 None:intergenic
TGCTGTCCCTACTCAAAGGC+CGG 0.516040 7.1:+8226280 MS.gene22470:CDS
CAAGAAGCCGGCCTTTGAGT+AGG 0.517834 7.1:-8226287 None:intergenic
GAAACCCATCCAAATTCAAC+CGG 0.517973 7.1:-8224462 None:intergenic
ACTCCCAAATTCTATCAAAA+GGG 0.522268 7.1:-8224285 None:intergenic
AAAGGAGAGTACAAAAGGTA+GGG 0.525115 7.1:-8224662 None:intergenic
CAATATTTCCTGGAATCAGC+AGG 0.526047 7.1:-8223813 None:intergenic
GTGACTGCCCAAGCATTGCC+AGG 0.528649 7.1:-8224484 None:intergenic
CAATGGATTCATCAATTGAA+AGG 0.530956 7.1:-8227834 None:intergenic
AGAGGTCCCTTGGATGAATC+GGG 0.531836 7.1:-8224700 None:intergenic
GGAAGGTTCGCCAAAGAGGC+CGG 0.538959 7.1:-8225560 None:intergenic
ATCAATTGAAAGGAAACTCT+CGG 0.544268 7.1:-8227824 None:intergenic
TGCAATATCTATTGAGAGAG+AGG 0.545748 7.1:+8227711 MS.gene22470:CDS
TATGTTCATGGAAGACTGAA+AGG 0.547784 7.1:-8227779 None:intergenic
CACGTTTCAAGCATAGTTCG+TGG 0.549106 7.1:+8227144 MS.gene22470:CDS
AAAGTTCCCATACAAGAAAG+AGG 0.550184 7.1:-8223880 None:intergenic
AAATGCCTTACTCAGGATCA+AGG 0.551232 7.1:-8227179 None:intergenic
CAGGAACACAACCTGTATGA+AGG 0.554861 7.1:-8227014 None:intergenic
GGAATCGAATACCTTCATAC+AGG 0.555690 7.1:+8227003 MS.gene22470:intron
AGATCCATTTGTACCGACTA+CGG 0.556234 7.1:-8224431 None:intergenic
TTTGTAAGTTTGGACTGTGG+AGG 0.557549 7.1:+8223663 MS.gene22470:CDS
GGTAAAATCTGGTATTGGGC+CGG 0.563684 7.1:-8225403 None:intergenic
AAGTCTCTATGGATAACTAC+AGG 0.565519 7.1:-8227033 None:intergenic
GAGAAAAGAATCGGTTCTGG+TGG 0.568182 7.1:+8226383 MS.gene22470:CDS
TAGCCTTGCTAATTTCAGGC+TGG 0.570437 7.1:-8224573 None:intergenic
TCTTGCTGTAGGCTGTGCAA+TGG 0.570639 7.1:-8227851 None:intergenic
AGCATAGTTCGTGGGACAGT+AGG 0.570999 7.1:+8227153 MS.gene22470:CDS
TACTATGGGAAACTGAAAGA+AGG 0.571051 7.1:+8226419 MS.gene22470:CDS
AGAGAAATCTATCTTGCTGT+AGG 0.575527 7.1:-8227862 None:intergenic
CAAATGGATCTCTAACATAC+CGG 0.577319 7.1:+8224443 MS.gene22470:CDS
AGGGATAGATTGGTAAATCC+CGG 0.577874 7.1:-8224643 None:intergenic
AAATCCTTGCTTAGTAGATG+TGG 0.578626 7.1:-8225805 None:intergenic
GTCTGCATCACTTTCACTGG+TGG 0.579368 7.1:-8224406 None:intergenic
AAGAATACATCACAGAAACT+TGG 0.580330 7.1:+8226632 MS.gene22470:CDS
AAATATCGCCTTTATGAACC+GGG 0.581128 7.1:+8224625 MS.gene22470:CDS
TATCAGTTGCGAACGAGACG+CGG 0.582020 7.1:+8223763 MS.gene22470:CDS
CATGCATAATGGCACTCTCA+AGG 0.583779 7.1:+8226710 MS.gene22470:CDS
GAGGCTGAAACATTAAGAGA+AGG 0.583919 7.1:+8227730 MS.gene22470:CDS
GACCATGGAACAGGAAGACA+TGG 0.585625 7.1:-8225035 None:intergenic
CAAGACACCCGATTCATCCA+AGG 0.586611 7.1:+8224693 MS.gene22470:CDS
CATACCGGTTGAATTTGGAT+GGG 0.587141 7.1:+8224458 MS.gene22470:CDS
CAGGCTCTTTAGAGCATGGG+CGG 0.588225 7.1:+8226809 MS.gene22470:intron
ACTCGGAAGGTTCGCCAAAG+AGG 0.588547 7.1:-8225564 None:intergenic
TCAGCAAACTGGACACAAGA+AGG 0.588692 7.1:+8225005 MS.gene22470:CDS
TCGTCACTCTTCCAAGAAGC+CGG 0.590249 7.1:-8226299 None:intergenic
CTTGAAAATAATCAGTTCAA+CGG 0.590454 7.1:+8225530 MS.gene22470:CDS
TCATAGTTGCTACCTAGCAA+TGG 0.594117 7.1:-8227586 None:intergenic
CACGAACTATGCTTGAAACG+TGG 0.594325 7.1:-8227143 None:intergenic
ATCTCCATCGCATTTACGAG+AGG 0.595194 7.1:-8224718 None:intergenic
GGGACCTCTCGTAAATGCGA+TGG 0.595920 7.1:+8224714 MS.gene22470:CDS
ACCACCACATCTACTAAGCA+AGG 0.597471 7.1:+8225801 MS.gene22470:CDS
TTTCTGTTGGTGCGACACAT+TGG 0.598568 7.1:+8223934 MS.gene22470:CDS
CTTGATGGAAATATGTTGAC+CGG 0.605708 7.1:+8225384 MS.gene22470:CDS
TTGATGTGTGTTCAACCTCA+CGG 0.606555 7.1:+8227643 MS.gene22470:CDS
ACAGTTCCCTCAAACTCGGA+AGG 0.607570 7.1:-8225577 None:intergenic
TGACAGGCAGATGAGAGCCA+AGG 0.607939 7.1:+8227077 MS.gene22470:CDS
ACTTACAGTTCCCTCAAACT+CGG 0.609163 7.1:-8225581 None:intergenic
TTTACCTTAGTGTCTCTGCA+AGG 0.612572 7.1:+8224135 MS.gene22470:CDS
ACGAACTATGCTTGAAACGT+GGG 0.616137 7.1:-8227142 None:intergenic
TTTCTGCTGTCCCTACTCAA+AGG 0.616254 7.1:+8226276 MS.gene22470:CDS
TCCTTGCTTAGTAGATGTGG+TGG 0.620860 7.1:-8225802 None:intergenic
GATCTTTAAGTCCATGCACC+CGG 0.623234 7.1:-8225424 None:intergenic
ACGTTTCAAGCATAGTTCGT+GGG 0.624710 7.1:+8227145 MS.gene22470:CDS
TTGCCGAAACATAGTCCAGT+GGG 0.628418 7.1:+8227436 MS.gene22470:CDS
AACCAATAATAATATACATG+TGG 0.630791 7.1:-8226070 None:intergenic
ATCGCAGAAGATGCTGCCAA+AGG 0.631080 7.1:+8226859 MS.gene22470:CDS
ACACGCTTGATGTTATCAGT+AGG 0.636831 7.1:+8223838 MS.gene22470:CDS
AGCAGGAAAGTGTCGTAGCG+TGG 0.640715 7.1:-8223796 None:intergenic
GTGATGCAGACAGCCGTAGT+CGG 0.650050 7.1:+8224418 MS.gene22470:CDS
AAGAGAAGGTAATTCAGATG+AGG 0.650101 7.1:+8227744 MS.gene22470:CDS
GCAAAACTACACATTGAGAG+TGG 0.650217 7.1:+8227541 MS.gene22470:CDS
AAGACACCCGATTCATCCAA+GGG 0.650509 7.1:+8224694 MS.gene22470:CDS
AGGCCAGCCTGAAATTAGCA+AGG 0.654509 7.1:+8224570 MS.gene22470:CDS
ATTGAGAGTGGAGATATACA+AGG 0.663228 7.1:+8227553 MS.gene22470:CDS
CTACAGCGGATCCATGACCA+TGG 0.679698 7.1:-8225050 None:intergenic
CAAACGCGAGTTCTCCAATG+AGG 0.679912 7.1:+8226487 MS.gene22470:CDS
GCAAACTGGACACAAGAAGG+AGG 0.681422 7.1:+8225008 MS.gene22470:CDS
ACTATGACCTACAATCAATG+TGG 0.683258 7.1:+8227602 MS.gene22470:CDS
AGAATAGTGAGAAAGCACTC+CGG 0.687580 7.1:-8224982 None:intergenic
ATTGCCGAAACATAGTCCAG+TGG 0.687758 7.1:+8227435 MS.gene22470:CDS
GTTGTGGATCTGAGCTACAG+CGG 0.691673 7.1:-8225064 None:intergenic
TTGATGTTATCAGTAGGACA+AGG 0.728583 7.1:+8223844 MS.gene22470:CDS
GATGGTCGCATATCTCCGTG+AGG 0.767240 7.1:-8227658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATGTAATTTATATCATA+TGG - chr7.1:8226954-8226973 None:intergenic 15.0%
!! AATCCATTTAATAAATATGT+TGG + chr7.1:8224861-8224880 MS.gene22470:intron 15.0%
!! AATTATAATTTATGTTGTTG+AGG + chr7.1:8224931-8224950 MS.gene22470:intron 15.0%
!! ACATGTAATTTATATCATAT+GGG - chr7.1:8226953-8226972 None:intergenic 15.0%
!! ATTATAATTTATGTTGTTGA+GGG + chr7.1:8224932-8224951 MS.gene22470:intron 15.0%
!!! AATTTTTTCTTTCTTGATAT+AGG + chr7.1:8227300-8227319 MS.gene22470:intron 15.0%
!! AACCAATAATAATATACATG+TGG - chr7.1:8226073-8226092 None:intergenic 20.0%
!! AATTTATATCATATGGGAAA+GGG - chr7.1:8226947-8226966 None:intergenic 20.0%
!! CAAGAATAATTTCAATGTAA+AGG + chr7.1:8225087-8225106 MS.gene22470:intron 20.0%
!! CATCCAACATATTTATTAAA+TGG - chr7.1:8224867-8224886 None:intergenic 20.0%
!! CTTTACATTGAAATTATTCT+TGG - chr7.1:8225089-8225108 None:intergenic 20.0%
!! GTTCAAAATAATATGTTATC+TGG + chr7.1:8225772-8225791 MS.gene22470:CDS 20.0%
!! TAATTTATATCATATGGGAA+AGG - chr7.1:8226948-8226967 None:intergenic 20.0%
!! TCATCTCTATTAACAAAAAT+TGG - chr7.1:8224382-8224401 None:intergenic 20.0%
!! TTCATTGAACCAAAATAATA+AGG - chr7.1:8226560-8226579 None:intergenic 20.0%
!!! AAGCTTATAAGTTTTCAATT+TGG + chr7.1:8227478-8227497 MS.gene22470:intron 20.0%
!!! AATATTGAAGAAAATGCTTT+TGG + chr7.1:8224601-8224620 MS.gene22470:CDS 20.0%
!!! ATATTGAAGAAAATGCTTTT+GGG + chr7.1:8224602-8224621 MS.gene22470:CDS 20.0%
!!! ATTATATCTTTCTTTTATCC+AGG + chr7.1:8226596-8226615 MS.gene22470:intron 20.0%
! AAAAATTAAGACAAGCTTTG+AGG - chr7.1:8227287-8227306 None:intergenic 25.0%
! AAGAGAAGATATTATGAGAA+AGG + chr7.1:8226158-8226177 MS.gene22470:CDS 25.0%
! AGCCACATGTATATTATTAT+TGG + chr7.1:8226068-8226087 MS.gene22470:CDS 25.0%
! ATTAACAAAAATTGGTACAG+AGG - chr7.1:8224374-8224393 None:intergenic 25.0%
! ATTATTTAGAGGGGAAAATT+TGG - chr7.1:8225977-8225996 None:intergenic 25.0%
! ATTGAAATTATTCTTGGTTG+TGG - chr7.1:8225083-8225102 None:intergenic 25.0%
! CAATGATGAAATACTTAGAA+TGG - chr7.1:8226531-8226550 None:intergenic 25.0%
! CTTGAAAATAATCAGTTCAA+CGG + chr7.1:8225530-8225549 MS.gene22470:CDS 25.0%
! TATGATCATGAAATGTTGTT+TGG + chr7.1:8224812-8224831 MS.gene22470:intron 25.0%
! TCTCAAATATCTGACAATAA+CGG - chr7.1:8226210-8226229 None:intergenic 25.0%
! TTCTTAGATTTAAATCATGC+AGG - chr7.1:8226753-8226772 None:intergenic 25.0%
!! AACAACTTTGAGAAAAGAAT+CGG + chr7.1:8226374-8226393 MS.gene22470:CDS 25.0%
!! AATGAGAGAGCTTATATTTT+TGG + chr7.1:8223992-8224011 MS.gene22470:CDS 25.0%
!! AATTTAAAGGAGAGTACAAA+AGG - chr7.1:8224670-8224689 None:intergenic 25.0%
!! CTGATGATGAAAAAAAAATG+TGG - chr7.1:8226005-8226024 None:intergenic 25.0%
!! TAGTGGTGTAATTTTATTCA+TGG + chr7.1:8225351-8225370 MS.gene22470:intron 25.0%
!! TCTTGTTTGGTTATACATAA+AGG + chr7.1:8226134-8226153 MS.gene22470:CDS 25.0%
!! TGTAAAGGTTAATCTTTTTG+AGG + chr7.1:8225102-8225121 MS.gene22470:intron 25.0%
!! TTGTGCTATCCTTATTATTT+TGG + chr7.1:8226548-8226567 MS.gene22470:intron 25.0%
!!! AGAATTGTGATTTTAGCAAT+AGG + chr7.1:8225665-8225684 MS.gene22470:intron 25.0%
!!! GAAGCAACAAAAGTATTATT+TGG - chr7.1:8225706-8225725 None:intergenic 25.0%
!!! GCTTATTTTTGAATGACTTA+TGG + chr7.1:8227252-8227271 MS.gene22470:intron 25.0%
!!! GTTTTAATTATGCCTATATG+TGG + chr7.1:8225124-8225143 MS.gene22470:intron 25.0%
!!! GTTTTGGAATTGTATACTAT+GGG + chr7.1:8226405-8226424 MS.gene22470:CDS 25.0%
!!! TTCAATTTGGAGTATTGAAA+GGG + chr7.1:8227491-8227510 MS.gene22470:intron 25.0%
!!! TTTAAAACTTCTGAAATCGA+TGG - chr7.1:8227679-8227698 None:intergenic 25.0%
!!! TTTCAATTTGGAGTATTGAA+AGG + chr7.1:8227490-8227509 MS.gene22470:intron 25.0%
AAAAATTTAAACTCACCCAC+TGG - chr7.1:8227454-8227473 None:intergenic 30.0%
AAAACCAGCAAGATAAAGAA+TGG - chr7.1:8224206-8224225 None:intergenic 30.0%
AAATTTGTCGAATTTCTTGC+AGG + chr7.1:8226790-8226809 MS.gene22470:intron 30.0%
AAGAATACATCACAGAAACT+TGG + chr7.1:8226632-8226651 MS.gene22470:CDS 30.0%
AAGAGTGATGTTTATAGCTT+CGG + chr7.1:8227350-8227369 MS.gene22470:CDS 30.0%
AAGTATCTTGAGAAAAACGA+CGG + chr7.1:8224745-8224764 MS.gene22470:CDS 30.0%
ACTCCCAAATTCTATCAAAA+GGG - chr7.1:8224288-8224307 None:intergenic 30.0%
AGATAGCAGTTAAAGTTCTA+AGG + chr7.1:8226447-8226466 MS.gene22470:CDS 30.0%
AGGAAAAGGTTTCAATTAAC+TGG - chr7.1:8225499-8225518 None:intergenic 30.0%
AGTTCAAGCGTAGATATAAA+AGG - chr7.1:8224068-8224087 None:intergenic 30.0%
ATCAATTGAAAGGAAACTCT+CGG - chr7.1:8227827-8227846 None:intergenic 30.0%
ATTCTTCTTGAACTCATATC+TGG + chr7.1:8227377-8227396 MS.gene22470:CDS 30.0%
ATTGGTAAAGGAGAAATGTA+AGG + chr7.1:8225157-8225176 MS.gene22470:intron 30.0%
CCAACAGAAATGTCAAATTT+AGG - chr7.1:8223924-8223943 None:intergenic 30.0%
CCATAAGTAAGCTTATTATC+AGG - chr7.1:8223729-8223748 None:intergenic 30.0%
CCTAAATTTGACATTTCTGT+TGG + chr7.1:8223921-8223940 MS.gene22470:CDS 30.0%
CCTGATAATAAGCTTACTTA+TGG + chr7.1:8223726-8223745 MS.gene22470:CDS 30.0%
CTAAGGAATAATTCCTATCA+AGG + chr7.1:8226464-8226483 MS.gene22470:CDS 30.0%
GAAAGTTTCACTGATGAAAT+TGG + chr7.1:8223690-8223709 MS.gene22470:CDS 30.0%
GAAGATATTATGAGAAAGGT+AGG + chr7.1:8226162-8226181 MS.gene22470:intron 30.0%
GAATACTATTCTCTTCTTCT+CGG - chr7.1:8226677-8226696 None:intergenic 30.0%
GAGAAAGTGGAATAACTTAA+TGG + chr7.1:8225897-8225916 MS.gene22470:intron 30.0%
TAATCCATTCTTTATCTTGC+TGG + chr7.1:8224199-8224218 MS.gene22470:intron 30.0%
TAATTTATGTTGTTGAGGGT+TGG + chr7.1:8224936-8224955 MS.gene22470:intron 30.0%
TCAGATATTACCAAAATGGT+TGG + chr7.1:8225255-8225274 MS.gene22470:CDS 30.0%
TCCTTCAGATATTACCAAAA+TGG + chr7.1:8225251-8225270 MS.gene22470:CDS 30.0%
TCTCAATAGATATTGCATCT+TGG - chr7.1:8227708-8227727 None:intergenic 30.0%
TGTTTATCAAATGCAACAAC+TGG + chr7.1:8224038-8224057 MS.gene22470:CDS 30.0%
TTCTGTATCAATTGTTTCAC+AGG + chr7.1:8227519-8227538 MS.gene22470:intron 30.0%
TTGGTAAAGGAGAAATGTAA+GGG + chr7.1:8225158-8225177 MS.gene22470:intron 30.0%
TTTAATGCAAGTTACCTCAT+TGG - chr7.1:8226504-8226523 None:intergenic 30.0%
! ATGACCCTTTTGATAGAATT+TGG + chr7.1:8224281-8224300 MS.gene22470:CDS 30.0%
! ATTTTATTCATGGATGCAGA+TGG + chr7.1:8225361-8225380 MS.gene22470:intron 30.0%
! CAATGGATTCATCAATTGAA+AGG - chr7.1:8227837-8227856 None:intergenic 30.0%
! CCAAAGGTTTATACGTTTTA+CGG + chr7.1:8226875-8226894 MS.gene22470:intron 30.0%
! TATTACCAAAATGGTTGGTT+TGG + chr7.1:8225260-8225279 MS.gene22470:CDS 30.0%
! TGACCCTTTTGATAGAATTT+GGG + chr7.1:8224282-8224301 MS.gene22470:CDS 30.0%
!! ACCATTTTGGTAATATCTGA+AGG - chr7.1:8225255-8225274 None:intergenic 30.0%
!! ATTATTATTGGTTCAGCAGT+TGG + chr7.1:8226080-8226099 MS.gene22470:CDS 30.0%
!! ATTTTCAAGATGACTGTAAG+AGG - chr7.1:8225519-8225538 None:intergenic 30.0%
!! CTATTTTCCACATTGATTGT+AGG - chr7.1:8227612-8227631 None:intergenic 30.0%
!! GCAACAAAAGTATTATTTGG+TGG - chr7.1:8225703-8225722 None:intergenic 30.0%
!! GCAAGATAAAGAATGGATTA+AGG - chr7.1:8224199-8224218 None:intergenic 30.0%
!! TTATTCTGCTTTGTTTGTGA+AGG - chr7.1:8226046-8226065 None:intergenic 30.0%
!!! ATTCTTTATCTTGCTGGTTT+TGG + chr7.1:8224205-8224224 MS.gene22470:intron 30.0%
!!! GGTTTTGGAATTGTATACTA+TGG + chr7.1:8226404-8226423 MS.gene22470:CDS 30.0%
AAAGTTCCCATACAAGAAAG+AGG - chr7.1:8223883-8223902 None:intergenic 35.0%
AAATATCGCCTTTATGAACC+GGG + chr7.1:8224625-8224644 MS.gene22470:CDS 35.0%
AAATCCTTGCTTAGTAGATG+TGG - chr7.1:8225808-8225827 None:intergenic 35.0%
AACATAGGTTCAATGGATCT+TGG + chr7.1:8227796-8227815 MS.gene22470:CDS 35.0%
AACATATCTGCAAACATCAC+GGG - chr7.1:8225755-8225774 None:intergenic 35.0%
AAGAGAAGGTAATTCAGATG+AGG + chr7.1:8227744-8227763 MS.gene22470:CDS 35.0%
AAGATGACTGTAAGAGGAAA+AGG - chr7.1:8225513-8225532 None:intergenic 35.0%
AAGTCTCTATGGATAACTAC+AGG - chr7.1:8227036-8227055 None:intergenic 35.0%
AAGTGGAATAACTTAATGGC+TGG + chr7.1:8225901-8225920 MS.gene22470:intron 35.0%
AATAGACAAATGCCTTACTC+AGG - chr7.1:8227189-8227208 None:intergenic 35.0%
ACCGAAACTTTCATTCGATA+TGG - chr7.1:8227411-8227430 None:intergenic 35.0%
ACTATGACCTACAATCAATG+TGG + chr7.1:8227602-8227621 MS.gene22470:CDS 35.0%
ACTCTCAAGGAACATCTTTA+TGG + chr7.1:8226723-8226742 MS.gene22470:CDS 35.0%
ACTCTTGTCAGTTAACTGTT+GGG - chr7.1:8227336-8227355 None:intergenic 35.0%
AGAAACATAAGCCTCTTACA+AGG - chr7.1:8224243-8224262 None:intergenic 35.0%
AGAAACTTGGTACAACTTCT+TGG + chr7.1:8226645-8226664 MS.gene22470:CDS 35.0%
ATAGCAGGAAATCCACATAT+AGG - chr7.1:8225139-8225158 None:intergenic 35.0%
ATATGTGGATTTCCTGCTAT+TGG + chr7.1:8225139-8225158 MS.gene22470:intron 35.0%
ATCCATTGAACCTATGTTCA+TGG - chr7.1:8227794-8227813 None:intergenic 35.0%
ATGTGGTCGTCATTATTTAG+AGG - chr7.1:8225988-8226007 None:intergenic 35.0%
ATTCTATCAAAAGGGTCATC+AGG - chr7.1:8224280-8224299 None:intergenic 35.0%
ATTGAGAGTGGAGATATACA+AGG + chr7.1:8227553-8227572 MS.gene22470:CDS 35.0%
ATTTCTCCTTTACCAATAGC+AGG - chr7.1:8225154-8225173 None:intergenic 35.0%
CAAACGAGTCTAGAAAATTC+AGG + chr7.1:8224536-8224555 MS.gene22470:CDS 35.0%
CAAATGGATCTCTAACATAC+CGG + chr7.1:8224443-8224462 MS.gene22470:CDS 35.0%
CCGTAAAACGTATAAACCTT+TGG - chr7.1:8226878-8226897 None:intergenic 35.0%
CTGATGAAATTGGACTTGAT+TGG + chr7.1:8223700-8223719 MS.gene22470:CDS 35.0%
CTTGAACTTCGACAATTCAA+TGG + chr7.1:8224080-8224099 MS.gene22470:CDS 35.0%
CTTGATGGAAATATGTTGAC+CGG + chr7.1:8225384-8225403 MS.gene22470:CDS 35.0%
GAAACTTGGTACAACTTCTT+GGG + chr7.1:8226646-8226665 MS.gene22470:CDS 35.0%
GAAATATCGCCTTTATGAAC+CGG + chr7.1:8224624-8224643 MS.gene22470:CDS 35.0%
GAACATATCTGCAAACATCA+CGG - chr7.1:8225756-8225775 None:intergenic 35.0%
GACTCCCAAATTCTATCAAA+AGG - chr7.1:8224289-8224308 None:intergenic 35.0%
GCCATATCGAATGAAAGTTT+CGG + chr7.1:8227407-8227426 MS.gene22470:CDS 35.0%
GGAATTATTGATCCATTGCT+AGG + chr7.1:8227574-8227593 MS.gene22470:CDS 35.0%
GGCTACTGTTATATCTTGTT+TGG + chr7.1:8226121-8226140 MS.gene22470:CDS 35.0%
GTGTATGAGTTCATGCATAA+TGG + chr7.1:8226699-8226718 MS.gene22470:CDS 35.0%
GTTTGGTTGAACTGTAAGTT+TGG + chr7.1:8225277-8225296 MS.gene22470:intron 35.0%
TACAAAAGGTAGGGATAGAT+TGG - chr7.1:8224656-8224675 None:intergenic 35.0%
TACTATGGGAAACTGAAAGA+AGG + chr7.1:8226419-8226438 MS.gene22470:CDS 35.0%
TATGTTCATGGAAGACTGAA+AGG - chr7.1:8227782-8227801 None:intergenic 35.0%
TATTATTCTCATGCTTGTCC+AGG + chr7.1:8226982-8227001 MS.gene22470:intron 35.0%
TCAGATTAAGCTTCTCATTG+AGG - chr7.1:8224789-8224808 None:intergenic 35.0%
TGCAATATCTATTGAGAGAG+AGG + chr7.1:8227711-8227730 MS.gene22470:CDS 35.0%
TGTGGTCGTCATTATTTAGA+GGG - chr7.1:8225987-8226006 None:intergenic 35.0%
TTCCATGAACATAGGTTCAA+TGG + chr7.1:8227789-8227808 MS.gene22470:CDS 35.0%
TTCTCATGTGTAATGCTGAA+CGG - chr7.1:8225882-8225901 None:intergenic 35.0%
TTGATGTTATCAGTAGGACA+AGG + chr7.1:8223844-8223863 MS.gene22470:CDS 35.0%
TTTCAGTCTTCCATGAACAT+AGG + chr7.1:8227781-8227800 MS.gene22470:CDS 35.0%
! AAAGGAGAGTACAAAAGGTA+GGG - chr7.1:8224665-8224684 None:intergenic 35.0%
! ACAATAGCCTTGCTAATTTC+AGG - chr7.1:8224580-8224599 None:intergenic 35.0%
! CTAGATCTTGTTTGAAGCAT+TGG + chr7.1:8224906-8224925 MS.gene22470:intron 35.0%
! CTGAATTTTCTAGACTCGTT+TGG - chr7.1:8224538-8224557 None:intergenic 35.0%
! TAAAGGAGAGTACAAAAGGT+AGG - chr7.1:8224666-8224685 None:intergenic 35.0%
! TAGGACAAGGTACCTATTAA+GGG + chr7.1:8223857-8223876 MS.gene22470:CDS 35.0%
! TCTAACATACCGGTTGAATT+TGG + chr7.1:8224453-8224472 MS.gene22470:CDS 35.0%
! TTCAACCAAACCAACCATTT+TGG - chr7.1:8225268-8225287 None:intergenic 35.0%
! TTTGAGAAAAGAATCGGTTC+TGG + chr7.1:8226380-8226399 MS.gene22470:CDS 35.0%
! TTTGCAGTTGAAGCTATTTC+CGG + chr7.1:8224963-8224982 MS.gene22470:intron 35.0%
! TTTTTCATCATCAGCTACTC+AGG + chr7.1:8226011-8226030 MS.gene22470:intron 35.0%
!! AATGGATTAAGGTACCTGAT+TGG - chr7.1:8224188-8224207 None:intergenic 35.0%
AAATGCCTTACTCAGGATCA+AGG - chr7.1:8227182-8227201 None:intergenic 40.0%
AAGCGTGTAGCAATATTTCC+TGG - chr7.1:8223826-8223845 None:intergenic 40.0%
ACAAGAAAGAGGCCCTTAAT+AGG - chr7.1:8223872-8223891 None:intergenic 40.0%
ACACGCTTGATGTTATCAGT+AGG + chr7.1:8223838-8223857 MS.gene22470:CDS 40.0%
ACCCGGTAAAATCTGGTATT+GGG - chr7.1:8225410-8225429 None:intergenic 40.0%
ACGAACTATGCTTGAAACGT+GGG - chr7.1:8227145-8227164 None:intergenic 40.0%
ACGTTTCAAGCATAGTTCGT+GGG + chr7.1:8227145-8227164 MS.gene22470:CDS 40.0%
ACTTACAGTTCCCTCAAACT+CGG - chr7.1:8225584-8225603 None:intergenic 40.0%
AGAGCCAAGGTTTCAGATTT+CGG + chr7.1:8227090-8227109 MS.gene22470:CDS 40.0%
AGGGATAGATTGGTAAATCC+CGG - chr7.1:8224646-8224665 None:intergenic 40.0%
CAATATTTCCTGGAATCAGC+AGG - chr7.1:8223816-8223835 None:intergenic 40.0%
CACTCTTGTCAGTTAACTGT+TGG - chr7.1:8227337-8227356 None:intergenic 40.0%
CAGCATTACACATGAGAAAG+TGG + chr7.1:8225884-8225903 MS.gene22470:intron 40.0%
CTCACTATTCTTCAGCAAAC+TGG + chr7.1:8224994-8225013 MS.gene22470:CDS 40.0%
GAAACCCATCCAAATTCAAC+CGG - chr7.1:8224465-8224484 None:intergenic 40.0%
GAGGCTGAAACATTAAGAGA+AGG + chr7.1:8227730-8227749 MS.gene22470:CDS 40.0%
GCAAAACTACACATTGAGAG+TGG + chr7.1:8227541-8227560 MS.gene22470:CDS 40.0%
GCAGCAATATTCTTCTTGAC+AGG + chr7.1:8227061-8227080 MS.gene22470:CDS 40.0%
GCTTATGTTTCTTCCGTTTC+AGG + chr7.1:8224251-8224270 MS.gene22470:intron 40.0%
GGAATCGAATACCTTCATAC+AGG + chr7.1:8227003-8227022 MS.gene22470:intron 40.0%
GGATTTCCTGCTATTGGTAA+AGG + chr7.1:8225145-8225164 MS.gene22470:intron 40.0%
GGGTGTCTTGGCAAATTTAA+AGG - chr7.1:8224683-8224702 None:intergenic 40.0%
GTGGTCGTCATTATTTAGAG+GGG - chr7.1:8225986-8226005 None:intergenic 40.0%
TAAGGGCCTCTTTCTTGTAT+GGG + chr7.1:8223874-8223893 MS.gene22470:CDS 40.0%
TATCCGGGAAAAACTTGACT+GGG + chr7.1:8225223-8225242 MS.gene22470:CDS 40.0%
TATCTTGTTGATGTTGCTGC+TGG + chr7.1:8224331-8224350 MS.gene22470:CDS 40.0%
TCAAGCTTGAATCGTGATAG+TGG + chr7.1:8225334-8225353 MS.gene22470:intron 40.0%
TCATAGTTGCTACCTAGCAA+TGG - chr7.1:8227589-8227608 None:intergenic 40.0%
TCATTGAGGAACTTACCATC+TGG - chr7.1:8224775-8224794 None:intergenic 40.0%
TGAGGGAACTGTAAGTTATC+TGG + chr7.1:8225588-8225607 MS.gene22470:intron 40.0%
TGCTAAAACACAGACGTTCA+TGG - chr7.1:8227214-8227233 None:intergenic 40.0%
TGGTAAATCCCGGTTCATAA+AGG - chr7.1:8224636-8224655 None:intergenic 40.0%
TTAAGGGCCTCTTTCTTGTA+TGG + chr7.1:8223873-8223892 MS.gene22470:CDS 40.0%
TTATCCGGGAAAAACTTGAC+TGG + chr7.1:8225222-8225241 MS.gene22470:CDS 40.0%
TTCTTGATAGAAGAGTCACC+TGG - chr7.1:8226617-8226636 None:intergenic 40.0%
TTTACCTTAGTGTCTCTGCA+AGG + chr7.1:8224135-8224154 MS.gene22470:CDS 40.0%
TTTGTAAGTTTGGACTGTGG+AGG + chr7.1:8223663-8223682 MS.gene22470:CDS 40.0%
! AAATTCAGGCTTTTGCTTCC+AGG + chr7.1:8224550-8224569 MS.gene22470:CDS 40.0%
! AAGACCGAAATCTGAAACCT+TGG - chr7.1:8227097-8227116 None:intergenic 40.0%
! ACAGTTTTCTGCCTTGTAAG+AGG + chr7.1:8224229-8224248 MS.gene22470:intron 40.0%
! ACATACCGGTTGAATTTGGA+TGG + chr7.1:8224457-8224476 MS.gene22470:CDS 40.0%
! ATTCCCAGTCAAGTTTTTCC+CGG - chr7.1:8225229-8225248 None:intergenic 40.0%
! CATACCGGTTGAATTTGGAT+GGG + chr7.1:8224458-8224477 MS.gene22470:CDS 40.0%
! GTAGGACAAGGTACCTATTA+AGG + chr7.1:8223856-8223875 MS.gene22470:CDS 40.0%
! GTCTCTGCAAGGATCAATTT+TGG + chr7.1:8224146-8224165 MS.gene22470:CDS 40.0%
! TGGTGCTTCTGTTCTACTTT+TGG + chr7.1:8226100-8226119 MS.gene22470:CDS 40.0%
! TTGAATTTGGATGGGTTTCC+TGG + chr7.1:8224466-8224485 MS.gene22470:CDS 40.0%
!! AGAATAGTGAGAAAGCACTC+CGG - chr7.1:8224985-8225004 None:intergenic 40.0%
!! AGACAAGCTTTGAGGTTACT+TGG - chr7.1:8227279-8227298 None:intergenic 40.0%
!! AGATCCATTTGTACCGACTA+CGG - chr7.1:8224434-8224453 None:intergenic 40.0%
!! CTTTCCAAACTTGCTGTTGA+TGG + chr7.1:8227114-8227133 MS.gene22470:CDS 40.0%
!! GTATGAAGGTATTCGATTCC+TGG - chr7.1:8227003-8227022 None:intergenic 40.0%
!! TGCAAGGATCAATTTTGGTG+CGG + chr7.1:8224151-8224170 MS.gene22470:CDS 40.0%
!!! TGCTGCTTTTCAAGTCTCTA+TGG - chr7.1:8227047-8227066 None:intergenic 40.0%
AAAAACGACGGTTCACCAGA+TGG + chr7.1:8224757-8224776 MS.gene22470:CDS 45.0%
AAGACACCCGATTCATCCAA+GGG + chr7.1:8224694-8224713 MS.gene22470:CDS 45.0%
ACCACCACATCTACTAAGCA+AGG + chr7.1:8225801-8225820 MS.gene22470:CDS 45.0%
ATAACAAGCTGCCACCACAA+GGG - chr7.1:8225206-8225225 None:intergenic 45.0%
ATCCATGTCTTCCTGTTCCA+TGG + chr7.1:8225033-8225052 MS.gene22470:CDS 45.0%
ATCTCCATCGCATTTACGAG+AGG - chr7.1:8224721-8224740 None:intergenic 45.0%
ATTGCCGAAACATAGTCCAG+TGG + chr7.1:8227435-8227454 MS.gene22470:CDS 45.0%
CACCCGGTAAAATCTGGTAT+TGG - chr7.1:8225411-8225430 None:intergenic 45.0%
CACGAACTATGCTTGAAACG+TGG - chr7.1:8227146-8227165 None:intergenic 45.0%
CACGTTTCAAGCATAGTTCG+TGG + chr7.1:8227144-8227163 MS.gene22470:CDS 45.0%
CAGGAACACAACCTGTATGA+AGG - chr7.1:8227017-8227036 None:intergenic 45.0%
CATGCATAATGGCACTCTCA+AGG + chr7.1:8226710-8226729 MS.gene22470:CDS 45.0%
CTGCATGCGTAGAATGATGA+AGG - chr7.1:8225473-8225492 None:intergenic 45.0%
GACTCCATCAACAGCAAGTT+TGG - chr7.1:8227121-8227140 None:intergenic 45.0%
GATCTTTAAGTCCATGCACC+CGG - chr7.1:8225427-8225446 None:intergenic 45.0%
GGATACCTTGATCCTGAGTA+AGG + chr7.1:8227174-8227193 MS.gene22470:intron 45.0%
GGTCATCAGGATACCTGAAA+CGG - chr7.1:8224267-8224286 None:intergenic 45.0%
TCACCCACTGGACTATGTTT+CGG - chr7.1:8227442-8227461 None:intergenic 45.0%
TCAGCAAACTGGACACAAGA+AGG + chr7.1:8225005-8225024 MS.gene22470:CDS 45.0%
TCCTTGCTTAGTAGATGTGG+TGG - chr7.1:8225805-8225824 None:intergenic 45.0%
TGATCCTTGCAGAGACACTA+AGG - chr7.1:8224142-8224161 None:intergenic 45.0%
TTGCCGAAACATAGTCCAGT+GGG + chr7.1:8227436-8227455 MS.gene22470:CDS 45.0%
TTGTTACCTTGTGTCCCTTG+TGG + chr7.1:8225189-8225208 MS.gene22470:intron 45.0%
TTTCTGCTGTCCCTACTCAA+AGG + chr7.1:8226276-8226295 MS.gene22470:CDS 45.0%
TTTCTGTTGGTGCGACACAT+TGG + chr7.1:8223934-8223953 MS.gene22470:CDS 45.0%
! GAGAAAAGAATCGGTTCTGG+TGG + chr7.1:8226383-8226402 MS.gene22470:CDS 45.0%
! GCCCAATACCAGATTTTACC+GGG + chr7.1:8225406-8225425 MS.gene22470:CDS 45.0%
! GGCCCAATACCAGATTTTAC+CGG + chr7.1:8225405-8225424 MS.gene22470:CDS 45.0%
! GGTAAAATCTGGTATTGGGC+CGG - chr7.1:8225406-8225425 None:intergenic 45.0%
! TAGCCTTGCTAATTTCAGGC+TGG - chr7.1:8224576-8224595 None:intergenic 45.0%
!! AGAATCGGTTCTGGTGGTTT+TGG + chr7.1:8226389-8226408 MS.gene22470:CDS 45.0%
!! TTGCAGGCTCTTTAGAGCAT+GGG + chr7.1:8226806-8226825 MS.gene22470:intron 45.0%
AAGAAGCCGGCCTTTGAGTA+GGG - chr7.1:8226289-8226308 None:intergenic 50.0%
ACAGCCGTAGTCGGTACAAA+TGG + chr7.1:8224427-8224446 MS.gene22470:CDS 50.0%
ACAGTTCCCTCAAACTCGGA+AGG - chr7.1:8225580-8225599 None:intergenic 50.0%
AGAGGTCCCTTGGATGAATC+GGG - chr7.1:8224703-8224722 None:intergenic 50.0%
AGCATAGTTCGTGGGACAGT+AGG + chr7.1:8227153-8227172 MS.gene22470:CDS 50.0%
AGGCCAGCCTGAAATTAGCA+AGG + chr7.1:8224570-8224589 MS.gene22470:CDS 50.0%
ATCGCAGAAGATGCTGCCAA+AGG + chr7.1:8226859-8226878 MS.gene22470:CDS 50.0%
ATGGGTTTCCTGGCAATGCT+TGG + chr7.1:8224476-8224495 MS.gene22470:CDS 50.0%
CAAACGCGAGTTCTCCAATG+AGG + chr7.1:8226487-8226506 MS.gene22470:CDS 50.0%
CAAGACACCCGATTCATCCA+AGG + chr7.1:8224693-8224712 MS.gene22470:CDS 50.0%
CATGGATGCAGATGGCTTGA+TGG + chr7.1:8225369-8225388 MS.gene22470:intron 50.0%
CTTGGATGAATCGGGTGTCT+TGG - chr7.1:8224695-8224714 None:intergenic 50.0%
GAACTCGCGTTTGCCTTGAT+AGG - chr7.1:8226480-8226499 None:intergenic 50.0%
GACCATGGAACAGGAAGACA+TGG - chr7.1:8225038-8225057 None:intergenic 50.0%
GAGAGGTCCCTTGGATGAAT+CGG - chr7.1:8224704-8224723 None:intergenic 50.0%
GATAACAAGCTGCCACCACA+AGG - chr7.1:8225207-8225226 None:intergenic 50.0%
GCAAACTGGACACAAGAAGG+AGG + chr7.1:8225008-8225027 MS.gene22470:CDS 50.0%
GCTGTCTGCATCACTTTCAC+TGG - chr7.1:8224412-8224431 None:intergenic 50.0%
GTCTGCATCACTTTCACTGG+TGG - chr7.1:8224409-8224428 None:intergenic 50.0%
GTCTTCCTGTTCCATGGTCA+TGG + chr7.1:8225039-8225058 MS.gene22470:CDS 50.0%
GTTGTGGATCTGAGCTACAG+CGG - chr7.1:8225067-8225086 None:intergenic 50.0%
TATCAGTTGCGAACGAGACG+CGG + chr7.1:8223763-8223782 MS.gene22470:CDS 50.0%
TCAGTTCAACGGTGTGCTAC+CGG + chr7.1:8225541-8225560 MS.gene22470:CDS 50.0%
TCCATGCACCCGGTAAAATC+TGG - chr7.1:8225417-8225436 None:intergenic 50.0%
TCGTCACTCTTCCAAGAAGC+CGG - chr7.1:8226302-8226321 None:intergenic 50.0%
TGGGTTTCCTGGCAATGCTT+GGG + chr7.1:8224477-8224496 MS.gene22470:CDS 50.0%
TTACCTTGTGTCCCTTGTGG+TGG + chr7.1:8225192-8225211 MS.gene22470:intron 50.0%
! ACCAGATTTTACCGGGTGCA+TGG + chr7.1:8225413-8225432 MS.gene22470:CDS 50.0%
! AGCATGGGCGGAGTATCAAT+TGG + chr7.1:8226821-8226840 MS.gene22470:CDS 50.0%
! TCTTGCTGTAGGCTGTGCAA+TGG - chr7.1:8227854-8227873 None:intergenic 50.0%
! TTGCTAATTTCAGGCTGGCC+TGG - chr7.1:8224571-8224590 None:intergenic 50.0%
!! CTTGCAGGCTCTTTAGAGCA+TGG + chr7.1:8226805-8226824 MS.gene22470:intron 50.0%
!! GACACTTTCCTGCTGATTCC+AGG + chr7.1:8223805-8223824 MS.gene22470:CDS 50.0%
!! TGTGGTGGCAGCTTGTTATC+CGG + chr7.1:8225207-8225226 MS.gene22470:intron 50.0%
AAGCAGTGAGCAGCTTCTGC+AGG - chr7.1:8226326-8226345 None:intergenic 55.0%
ACTCGGAAGGTTCGCCAAAG+AGG - chr7.1:8225567-8225586 None:intergenic 55.0%
CAAGAAGCCGGCCTTTGAGT+AGG - chr7.1:8226290-8226309 None:intergenic 55.0%
CGCATTTACGAGAGGTCCCT+TGG - chr7.1:8224713-8224732 None:intergenic 55.0%
CGGAGACTGATGCTCCAATC+AGG + chr7.1:8224171-8224190 MS.gene22470:CDS 55.0%
CGGATCCATGACCATGGAAC+AGG - chr7.1:8225047-8225066 None:intergenic 55.0%
CTACAGCGGATCCATGACCA+TGG - chr7.1:8225053-8225072 None:intergenic 55.0%
GGCGAACCTTCCGAGTTTGA+GGG + chr7.1:8225571-8225590 MS.gene22470:CDS 55.0%
GGGACCTCTCGTAAATGCGA+TGG + chr7.1:8224714-8224733 MS.gene22470:CDS 55.0%
GTGATGCAGACAGCCGTAGT+CGG + chr7.1:8224418-8224437 MS.gene22470:CDS 55.0%
TGACAGGCAGATGAGAGCCA+AGG + chr7.1:8227077-8227096 MS.gene22470:CDS 55.0%
TGCTGTCCCTACTCAAAGGC+CGG + chr7.1:8226280-8226299 MS.gene22470:CDS 55.0%
TGGCGAACCTTCCGAGTTTG+AGG + chr7.1:8225570-8225589 MS.gene22470:CDS 55.0%
! CTACTCAAAGGCCGGCTTCT+TGG + chr7.1:8226288-8226307 MS.gene22470:CDS 55.0%
!! AGCAGGAAAGTGTCGTAGCG+TGG - chr7.1:8223799-8223818 None:intergenic 55.0%
!! CAGGCTCTTTAGAGCATGGG+CGG + chr7.1:8226809-8226828 MS.gene22470:intron 55.0%
!! GTGGTGGCAGCTTGTTATCC+GGG + chr7.1:8225208-8225227 MS.gene22470:intron 55.0%
CTGCCACCACAAGGGACACA+AGG - chr7.1:8225198-8225217 None:intergenic 60.0%
GGAAGGTTCGCCAAAGAGGC+CGG - chr7.1:8225563-8225582 None:intergenic 60.0%
! GTGACTGCCCAAGCATTGCC+AGG - chr7.1:8224487-8224506 None:intergenic 60.0%
CGGTGTGCTACCGGCCTCTT+TGG + chr7.1:8225550-8225569 MS.gene22470:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 8223661 8227876 8223661 ID=MS.gene22470
chr7.1 mRNA 8223661 8227876 8223661 ID=MS.gene22470.t1;Parent=MS.gene22470
chr7.1 exon 8223661 8224192 8223661 ID=MS.gene22470.t1.exon1;Parent=MS.gene22470.t1
chr7.1 CDS 8223661 8224192 8223661 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8224273 8224778 8224273 ID=MS.gene22470.t1.exon2;Parent=MS.gene22470.t1
chr7.1 CDS 8224273 8224778 8224273 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8224970 8225102 8224970 ID=MS.gene22470.t1.exon3;Parent=MS.gene22470.t1
chr7.1 CDS 8224970 8225102 8224970 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8225218 8225289 8225218 ID=MS.gene22470.t1.exon4;Parent=MS.gene22470.t1
chr7.1 CDS 8225218 8225289 8225218 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8225380 8225448 8225380 ID=MS.gene22470.t1.exon5;Parent=MS.gene22470.t1
chr7.1 CDS 8225380 8225448 8225380 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8225526 8225597 8225526 ID=MS.gene22470.t1.exon6;Parent=MS.gene22470.t1
chr7.1 CDS 8225526 8225597 8225526 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8225768 8225836 8225768 ID=MS.gene22470.t1.exon7;Parent=MS.gene22470.t1
chr7.1 CDS 8225768 8225836 8225768 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8226025 8226179 8226025 ID=MS.gene22470.t1.exon8;Parent=MS.gene22470.t1
chr7.1 CDS 8226025 8226179 8226025 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8226267 8226508 8226267 ID=MS.gene22470.t1.exon9;Parent=MS.gene22470.t1
chr7.1 CDS 8226267 8226508 8226267 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8226618 8226744 8226618 ID=MS.gene22470.t1.exon10;Parent=MS.gene22470.t1
chr7.1 CDS 8226618 8226744 8226618 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8226812 8226880 8226812 ID=MS.gene22470.t1.exon11;Parent=MS.gene22470.t1
chr7.1 CDS 8226812 8226880 8226812 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8227004 8227190 8227004 ID=MS.gene22470.t1.exon12;Parent=MS.gene22470.t1
chr7.1 CDS 8227004 8227190 8227004 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8227322 8227457 8227322 ID=MS.gene22470.t1.exon13;Parent=MS.gene22470.t1
chr7.1 CDS 8227322 8227457 8227322 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
chr7.1 exon 8227541 8227876 8227541 ID=MS.gene22470.t1.exon14;Parent=MS.gene22470.t1
chr7.1 CDS 8227541 8227876 8227541 ID=cds.MS.gene22470.t1;Parent=MS.gene22470.t1
Gene Sequence

>MS.gene22470

GTTTTGTAAGTTTGGACTGTGGAGGTTCAGAAAGTTTCACTGATGAAATTGGACTTGATTGGACTCCTGATAATAAGCTTACTTATGGTGAAATAAGCACTATATCAGTTGCGAACGAGACGCGGAAGCAATACACCACGCTACGACACTTTCCTGCTGATTCCAGGAAATATTGCTACACGCTTGATGTTATCAGTAGGACAAGGTACCTATTAAGGGCCTCTTTCTTGTATGGGAACTTTGACAATAATAATGTCTATCCTAAATTTGACATTTCTGTTGGTGCGACACATTGGTCTACTATTGTTATCTCTGATGCTAATATTATAGAAATGAGAGAGCTTATATTTTTGGCTTCAAGTTCGACTGTGAGTGTATGTTTATCAAATGCAACAACTGGACAGCCTTTTATATCTACGCTTGAACTTCGACAATTCAATGGTTCAATTTATTTTACACAATTTGAGCAACAATTTTACCTTAGTGTCTCTGCAAGGATCAATTTTGGTGCGGAGACTGATGCTCCAATCAGGTACCTTAATCCATTCTTTATCTTGCTGGTTTTGGAACAGTTTTCTGCCTTGTAAGAGGCTTATGTTTCTTCCGTTTCAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCTGATTCTGTGAAGAAAGCAAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAGTTTCTACCTCTGTACCAATTTTTGTTAATAGAGATGATGTACCACCAGTGAAAGTGATGCAGACAGCCGTAGTCGGTACAAATGGATCTCTAACATACCGGTTGAATTTGGATGGGTTTCCTGGCAATGCTTGGGCAGTCACGTATTTTGCAGAGATTGAAGATTTGAGTCCAAACGAGTCTAGAAAATTCAGGCTTTTGCTTCCAGGCCAGCCTGAAATTAGCAAGGCTATTGTAAATATTGAAGAAAATGCTTTTGGGAAATATCGCCTTTATGAACCGGGATTTACCAATCTATCCCTACCTTTTGTACTCTCCTTTAAATTTGCCAAGACACCCGATTCATCCAAGGGACCTCTCGTAAATGCGATGGAGATAAATAAGTATCTTGAGAAAAACGACGGTTCACCAGATGGTAAGTTCCTCAATGAGAAGCTTAATCTGATTGTATGATCATGAAATGTTGTTTGGCTAATTTGAAACAGTTTAGAATAGAAAATCCATTTAATAAATATGTTGGATGCAATGCAAAACGTTACGAGCTAGATCTTGTTTGAAGCATTGGAAAATTATAATTTATGTTGTTGAGGGTTGGATATTTTGCAGTTGAAGCTATTTCCGGAGTGCTTTCTCACTATTCTTCAGCAAACTGGACACAAGAAGGAGGTGATCCATGTCTTCCTGTTCCATGGTCATGGATCCGCTGTAGCTCAGATCCACAACCAAGAATAATTTCAATGTAAAGGTTAATCTTTTTGAGGTTTTAATTATGCCTATATGTGGATTTCCTGCTATTGGTAAAGGAGAAATGTAAGGGTGTTATAATTGTTACCTTGTGTCCCTTGTGGTGGCAGCTTGTTATCCGGGAAAAACTTGACTGGGAATATTCCTTCAGATATTACCAAAATGGTTGGTTTGGTTGAACTGTAAGTTTGGTATTGCTTTCTAATTTTGTCTTTTGTTTGATCTGTCAAGCTTGAATCGTGATAGTGGTGTAATTTTATTCATGGATGCAGATGGCTTGATGGAAATATGTTGACCGGCCCAATACCAGATTTTACCGGGTGCATGGACTTAAAGATCATGTAATTTCTGATAACTTATTTCCTTCATCATTCTACGCATGCAGTATCCAGTTAATTGAAACCTTTTCCTCTTACAGTCATCTTGAAAATAATCAGTTCAACGGTGTGCTACCGGCCTCTTTGGCGAACCTTCCGAGTTTGAGGGAACTGTAAGTTATCTGGACATAGAGTATCTATTATTGTATCAAAATAGAAATTAGTATACTTTTGATGCATAGAATTGTGATTTTAGCAATAGGACATATACTTATCCACCAAATAATACTTTTGTTGCTTCACTCTTTTGTTACAATTCGAGTAATGCCCGTGATGTTTGCAGATATGTTCAAAATAATATGTTATCTGGAGAAGTACCACCACATCTACTAAGCAAGGATTTGATTTTAAAGTGAGTACATATTTTACTTTCTAACTTAAACACAAGATGAAACCGTTCAGCATTACACATGAGAAAGTGGAATAACTTAATGGCTGGTTGCATTTTAGAAAGTAGTTCAAATTAATTATGTTTTTTTAGAGCATTTTCCAAATTTTCCCCTCTAAATAATGACGACCACATTTTTTTTTCATCATCAGCTACTCAGGAAACACTAACCTTCACAAACAAAGCAGAATAAAGAGCCACATGTATATTATTATTGGTTCAGCAGTTGGTGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGTTTGGTTATACATAAAGGAAAGAGAAGATATTATGAGAAAGGTAGGATTCTAAGCACGATTATCTATTCCGTTATTGTCAGATATTTGAGATGATAAAAAATGATTTACTTGTTTACACTCTTTATAGATCACATAGTTTCTGCTGTCCCTACTCAAAGGCCGGCTTCTTGGAAGAGTGACGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTATCTGAAATTGAAAGTGCTACAAACAACTTTGAGAAAAGAATCGGTTCTGGTGGTTTTGGAATTGTATACTATGGGAAACTGAAAGAAGGAAAAGAGATAGCAGTTAAAGTTCTAAGGAATAATTCCTATCAAGGCAAACGCGAGTTCTCCAATGAGGTAACTTGCATTAAATAAACCATTCTAAGTATTTCATCATTGTGCTATCCTTATTATTTTGGTTCAATGAATTGATATGATAGTTACATTATATCTTTCTTTTATCCAGGTGACTCTTCTATCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGGTATTGCCGAGAAGAAGAGAATAGTATTCTTGTGTATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGTAAGCCTGCATGATTTAAATCTAAGAACATAAGTCAGTGTCTTGAAATTTGTCGAATTTCTTGCAGGCTCTTTAGAGCATGGGCGGAGTATCAATTGGATTAAACGTCTTGAGATCGCAGAAGATGCTGCCAAAGGTTTATACGTTTTACGGAATTTAACGCTAATTATGTGTTATTTAAGATAATAGAATCAAATAGCCCTTTCCCATATGATATAAATTACATGTTATTAACTATATTATTCTCATGCTTGTCCAGGAATCGAATACCTTCATACAGGTTGTGTTCCTGTAGTTATCCATAGAGACTTGAAAAGCAGCAATATTCTTCTTGACAGGCAGATGAGAGCCAAGGTTTCAGATTTCGGTCTTTCCAAACTTGCTGTTGATGGAGTCTCCCACGTTTCAAGCATAGTTCGTGGGACAGTAGGATACCTTGATCCTGAGTAAGGCATTTGTCTATTTTCCATGAACGTCTGTGTTTTAGCAAACAGTTTATTATTTCTTGCTTATTTTTGAATGACTTATGGTCCAAGTAACCTCAAAGCTTGTCTTAATTTTTTCTTTCTTGATATAGGTACTATATTTCCCAACAGTTAACTGACAAGAGTGATGTTTATAGCTTCGGCGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCCATATCGAATGAAAGTTTCGGTCTTCATTGCCGAAACATAGTCCAGTGGGTGAGTTTAAATTTTTCTGCAAGCTTATAAGTTTTCAATTTGGAGTATTGAAAGGGTGTTTTTCTGTATCAATTGTTTCACAGGCAAAACTACACATTGAGAGTGGAGATATACAAGGAATTATTGATCCATTGCTAGGTAGCAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCTTTGATGTGTGTTCAACCTCACGGAGATATGCGACCATCGATTTCAGAAGTTTTAAAAGAGATCCAAGATGCAATATCTATTGAGAGAGAGGCTGAAACATTAAGAGAAGGTAATTCAGATGAGGCGTCAAGAAATTCCTTTCAGTCTTCCATGAACATAGGTTCAATGGATCTTGGTAGAGCCGAGAGTTTCCTTTCAATTGATGAATCCATTGCACAGCCTACAGCAAGATAG

Protein sequence

>MS.gene22470.t1

VLUVWTVEVQKVSLMKLDLIGLLIISLLMVKUALYQLRTRRGSNTPRYDTFLLIPGNIATRLMLSVGQGTYUGPLSCMGTLTIIMSILNLTFLLVRHIGLLLLSLMLILUKUESLYFWLQVRLUVYVYQMQQLDSLLYLRLNFDNSMVQFILHNLSNNFTLVSLQGSILVRRLMLQSGILMTLLIEFGSLILURKQIILLMLLLELRKFLPLYQFLLIEMMYHQUKUCRQPUSVQMDLUHTGUIWMGFLAMLGQSRILQRLKIUVQTSLENSGFCFQASLKLARLLUILKKMLLGNIAFMNRDLPIYPYLLYSPLNLPRHPIHPRDLSUMRWRUISILRKTTVHQMLKLFPECFLTILQQTGHKKEVIHVFLFHGHGSAVAQIHNQEUFQSCYPGKTULGIFLQILPKWLVWLNYGLMEICUPAQYQILPGAWTURSFILKIISSTVCYRPLWRTFRVUGNYMFKIICYLEKYHHIYUARIUFUTTQETLTFTNKAEURATCILLLVQQLVLLFYFWLLLYLVWLYIKEREDIMRKITUFLLSLLKGRLLGRVTILQKLLTASVYLKLKVLQTTLRKESVLVVLELYTMGNUKKEKRUQLKFUGIIPIKANASSPMRULFYQEYITETWYNFLGIAEKKRIVFLCMSSCIMALSRNIFMALUSMGGVSIGLNVLRSQKMLPKESNTFIQVVFLULSIETUKAAIFFLTGRUEPRFQISVFPNLLLMESPTFQAUFVGQUDTLILSTIFPNSULTRVMFIASAUFFLNSYLVKKPYRMKVSVFIAETUSSGQNYTLRVEIYKELLIHCUVATMTYNQCGKUQRKLUCVFNLTEICDHRFQKFUKRSKMQYLLRERLKHUEKVIQMRRQEIPFSLPUTUVQWILVEPRVSFQLMNPLHSLQQD