Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051660.t1 | XP_013465951.1 | 97.4 | 427 | 10 | 1 | 1 | 427 | 1 | 426 | 5.20E-220 | 773.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051660.t1 | Q6NKN9 | 45.2 | 354 | 138 | 13 | 85 | 427 | 58 | 366 | 4.5e-55 | 216.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051660.t1 | A0A072VPD3 | 97.4 | 427 | 10 | 1 | 1 | 427 | 1 | 426 | 3.8e-220 | 773.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051660.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049660 | MS.gene051660 | 0.800858 | 1.18E-48 | -1.69E-46 |
| MS.gene05054 | MS.gene051660 | 0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene051660 | 0.819908 | 9.07E-53 | -1.69E-46 |
| MS.gene051660 | MS.gene053536 | 0.837202 | 5.97E-57 | -1.69E-46 |
| MS.gene051660 | MS.gene053538 | 0.833853 | 4.20E-56 | -1.69E-46 |
| MS.gene051660 | MS.gene057082 | 0.806543 | 7.82E-50 | -1.69E-46 |
| MS.gene051660 | MS.gene059424 | 0.829728 | 4.37E-55 | -1.69E-46 |
| MS.gene051660 | MS.gene06550 | 0.816082 | 6.64E-52 | -1.69E-46 |
| MS.gene051660 | MS.gene066010 | 0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene051660 | MS.gene06793 | 0.814564 | 1.44E-51 | -1.69E-46 |
| MS.gene051660 | MS.gene22470 | 0.804476 | 2.12E-49 | -1.69E-46 |
| MS.gene051660 | MS.gene24527 | 0.824715 | 6.95E-54 | -1.69E-46 |
| MS.gene051660 | MS.gene26464 | 0.816852 | 4.47E-52 | -1.69E-46 |
| MS.gene051660 | MS.gene26465 | 0.835751 | 1.40E-56 | -1.69E-46 |
| MS.gene051660 | MS.gene32854 | 0.860239 | 2.37E-63 | -1.69E-46 |
| MS.gene051660 | MS.gene36880 | 0.822716 | 2.04E-53 | -1.69E-46 |
| MS.gene051660 | MS.gene37460 | 0.851947 | 6.37E-61 | -1.69E-46 |
| MS.gene051660 | MS.gene39297 | 0.828933 | 6.82E-55 | -1.69E-46 |
| MS.gene051660 | MS.gene45937 | 0.803634 | 3.17E-49 | -1.69E-46 |
| MS.gene051660 | MS.gene55101 | 0.816164 | 6.37E-52 | -1.69E-46 |
| MS.gene051660 | MS.gene57684 | 0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene051660 | MS.gene64442 | 0.81384 | 2.09E-51 | -1.69E-46 |
| MS.gene051660 | MS.gene64763 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene051660 | MS.gene71698 | 0.80743 | 5.08E-50 | -1.69E-46 |
| MS.gene051660 | MS.gene72487 | 0.815004 | 1.15E-51 | -1.69E-46 |
| MS.gene051660 | MS.gene77734 | 0.823157 | 1.61E-53 | -1.69E-46 |
| MS.gene051660 | MS.gene78065 | 0.805553 | 1.26E-49 | -1.69E-46 |
| MS.gene051660 | MS.gene78758 | 0.816076 | 6.66E-52 | -1.69E-46 |
| MS.gene051660 | MS.gene90172 | 0.825539 | 4.44E-54 | -1.69E-46 |
| MS.gene051660 | MS.gene92988 | 0.827836 | 1.26E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051660.t1 | MTR_1g017350 | 98.126 | 427 | 7 | 1 | 1 | 427 | 1 | 426 | 0.0 | 855 |
| MS.gene051660.t1 | MTR_1g017350 | 97.424 | 427 | 7 | 2 | 1 | 427 | 1 | 423 | 0.0 | 845 |
| MS.gene051660.t1 | MTR_1g017350 | 97.867 | 422 | 8 | 1 | 1 | 422 | 1 | 421 | 0.0 | 844 |
| MS.gene051660.t1 | MTR_1g017350 | 97.156 | 422 | 8 | 2 | 1 | 422 | 1 | 418 | 0.0 | 834 |
| MS.gene051660.t1 | MTR_8g065740 | 42.405 | 316 | 127 | 10 | 105 | 391 | 126 | 415 | 6.06e-56 | 192 |
| MS.gene051660.t1 | MTR_5g048860 | 54.412 | 204 | 64 | 6 | 192 | 391 | 297 | 475 | 9.45e-56 | 193 |
| MS.gene051660.t1 | MTR_7g053410 | 39.752 | 322 | 152 | 8 | 75 | 355 | 91 | 411 | 9.98e-51 | 179 |
| MS.gene051660.t1 | MTR_3g116770 | 48.558 | 208 | 76 | 4 | 233 | 409 | 163 | 370 | 1.01e-50 | 176 |
| MS.gene051660.t1 | MTR_7g053410 | 39.752 | 322 | 152 | 8 | 75 | 355 | 91 | 411 | 1.58e-50 | 179 |
| MS.gene051660.t1 | MTR_3g116770 | 46.890 | 209 | 79 | 4 | 233 | 409 | 163 | 371 | 2.08e-50 | 175 |
| MS.gene051660.t1 | MTR_8g012290 | 38.810 | 353 | 161 | 15 | 88 | 391 | 81 | 427 | 3.51e-48 | 172 |
| MS.gene051660.t1 | MTR_8g012290 | 38.810 | 353 | 161 | 15 | 88 | 391 | 81 | 427 | 3.90e-48 | 172 |
| MS.gene051660.t1 | MTR_4g070320 | 70.093 | 107 | 30 | 1 | 244 | 348 | 124 | 230 | 4.42e-44 | 157 |
| MS.gene051660.t1 | MTR_8g062240 | 46.970 | 198 | 97 | 4 | 171 | 360 | 53 | 250 | 3.54e-42 | 150 |
| MS.gene051660.t1 | MTR_3g498825 | 66.981 | 106 | 32 | 1 | 243 | 345 | 129 | 234 | 2.37e-40 | 147 |
| MS.gene051660.t1 | MTR_8g099880 | 73.626 | 91 | 21 | 1 | 258 | 345 | 142 | 232 | 8.68e-40 | 145 |
| MS.gene051660.t1 | MTR_7g092510 | 68.041 | 97 | 31 | 0 | 250 | 346 | 162 | 258 | 1.59e-39 | 145 |
| MS.gene051660.t1 | MTR_5g037250 | 60.484 | 124 | 44 | 2 | 209 | 332 | 65 | 183 | 2.00e-38 | 139 |
| MS.gene051660.t1 | MTR_1g059270 | 61.165 | 103 | 40 | 0 | 250 | 352 | 149 | 251 | 2.06e-38 | 139 |
| MS.gene051660.t1 | MTR_1g059270 | 63.918 | 97 | 35 | 0 | 250 | 346 | 149 | 245 | 4.69e-37 | 138 |
| MS.gene051660.t1 | MTR_6g084120 | 52.000 | 100 | 38 | 2 | 241 | 340 | 136 | 225 | 4.23e-24 | 101 |
| MS.gene051660.t1 | MTR_4g131160 | 60.241 | 83 | 32 | 1 | 244 | 326 | 179 | 260 | 2.72e-22 | 98.6 |
| MS.gene051660.t1 | MTR_4g131160 | 60.241 | 83 | 32 | 1 | 244 | 326 | 182 | 263 | 3.04e-22 | 98.2 |
| MS.gene051660.t1 | MTR_1g080890 | 67.164 | 67 | 21 | 1 | 260 | 326 | 192 | 257 | 8.43e-21 | 93.6 |
| MS.gene051660.t1 | MTR_4g033295 | 58.462 | 65 | 27 | 0 | 261 | 325 | 118 | 182 | 1.88e-16 | 77.8 |
| MS.gene051660.t1 | MTR_4g033295 | 56.716 | 67 | 28 | 1 | 261 | 326 | 118 | 184 | 2.57e-16 | 77.0 |
| MS.gene051660.t1 | MTR_2g098310 | 47.126 | 87 | 38 | 1 | 247 | 325 | 310 | 396 | 2.62e-16 | 80.9 |
| MS.gene051660.t1 | MTR_1g052470 | 52.055 | 73 | 35 | 0 | 259 | 331 | 296 | 368 | 5.72e-16 | 79.3 |
| MS.gene051660.t1 | MTR_7g092540 | 52.113 | 71 | 34 | 0 | 261 | 331 | 243 | 313 | 7.46e-16 | 78.6 |
| MS.gene051660.t1 | MTR_4g065870 | 56.716 | 67 | 29 | 0 | 259 | 325 | 353 | 419 | 7.76e-16 | 79.3 |
| MS.gene051660.t1 | MTR_2g098310 | 47.674 | 86 | 37 | 1 | 247 | 324 | 310 | 395 | 7.98e-16 | 79.3 |
| MS.gene051660.t1 | MTR_1g084980 | 47.945 | 73 | 37 | 1 | 263 | 335 | 464 | 535 | 1.53e-15 | 79.3 |
| MS.gene051660.t1 | MTR_7g092540 | 54.688 | 64 | 29 | 0 | 261 | 324 | 243 | 306 | 3.77e-15 | 76.3 |
| MS.gene051660.t1 | MTR_1g070870 | 51.579 | 95 | 45 | 1 | 232 | 326 | 91 | 184 | 4.38e-15 | 75.5 |
| MS.gene051660.t1 | MTR_4g065870 | 58.065 | 62 | 26 | 0 | 261 | 322 | 355 | 416 | 4.54e-15 | 77.0 |
| MS.gene051660.t1 | MTR_1g069155 | 52.174 | 69 | 32 | 1 | 263 | 331 | 319 | 386 | 6.42e-15 | 77.0 |
| MS.gene051660.t1 | MTR_1g070870 | 65.672 | 67 | 22 | 1 | 260 | 326 | 122 | 187 | 1.91e-14 | 73.9 |
| MS.gene051660.t1 | MTR_7g099540 | 40.952 | 105 | 58 | 2 | 230 | 331 | 218 | 321 | 2.68e-14 | 74.7 |
| MS.gene051660.t1 | MTR_3g449770 | 41.284 | 109 | 59 | 3 | 222 | 326 | 266 | 373 | 3.77e-13 | 71.6 |
| MS.gene051660.t1 | MTR_3g028520 | 47.761 | 67 | 35 | 0 | 259 | 325 | 320 | 386 | 7.30e-13 | 70.1 |
| MS.gene051660.t1 | MTR_3g027650 | 47.761 | 67 | 35 | 0 | 259 | 325 | 320 | 386 | 7.30e-13 | 70.1 |
| MS.gene051660.t1 | MTR_7g099540 | 40.000 | 100 | 56 | 2 | 230 | 326 | 218 | 316 | 9.88e-13 | 70.1 |
| MS.gene051660.t1 | MTR_7g110810 | 48.387 | 62 | 31 | 1 | 272 | 333 | 213 | 273 | 3.34e-12 | 68.2 |
| MS.gene051660.t1 | MTR_1g018090 | 50.769 | 65 | 31 | 1 | 261 | 325 | 274 | 337 | 3.76e-12 | 67.8 |
| MS.gene051660.t1 | MTR_3g027650 | 48.438 | 64 | 33 | 0 | 259 | 322 | 320 | 383 | 4.48e-12 | 67.8 |
| MS.gene051660.t1 | MTR_1g019240 | 46.154 | 65 | 34 | 1 | 263 | 327 | 87 | 150 | 6.95e-12 | 65.9 |
| MS.gene051660.t1 | MTR_8g036235 | 39.506 | 81 | 41 | 1 | 253 | 325 | 300 | 380 | 7.66e-12 | 67.0 |
| MS.gene051660.t1 | MTR_7g111320 | 53.125 | 64 | 29 | 1 | 263 | 326 | 434 | 496 | 1.71e-11 | 66.6 |
| MS.gene051660.t1 | MTR_3g103030 | 51.562 | 64 | 30 | 1 | 262 | 325 | 230 | 292 | 2.83e-11 | 64.7 |
| MS.gene051660.t1 | MTR_2g098310 | 33.884 | 121 | 37 | 2 | 247 | 324 | 310 | 430 | 9.08e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051660.t1 | AT1G10120 | 42.664 | 443 | 161 | 21 | 1 | 427 | 1 | 366 | 1.08e-75 | 240 |
| MS.gene051660.t1 | AT1G10120 | 42.664 | 443 | 161 | 21 | 1 | 427 | 1 | 366 | 1.08e-75 | 240 |
| MS.gene051660.t1 | AT1G68920 | 63.871 | 155 | 30 | 3 | 238 | 392 | 285 | 413 | 5.38e-55 | 190 |
| MS.gene051660.t1 | AT1G68920 | 63.871 | 155 | 30 | 3 | 238 | 392 | 286 | 414 | 5.55e-55 | 190 |
| MS.gene051660.t1 | AT1G68920 | 63.871 | 155 | 30 | 3 | 238 | 392 | 286 | 414 | 5.55e-55 | 190 |
| MS.gene051660.t1 | AT1G68920 | 63.871 | 155 | 30 | 3 | 238 | 392 | 286 | 414 | 5.55e-55 | 190 |
| MS.gene051660.t1 | AT1G26260 | 69.231 | 130 | 34 | 2 | 226 | 350 | 133 | 261 | 3.24e-51 | 176 |
| MS.gene051660.t1 | AT1G26260 | 64.583 | 144 | 45 | 2 | 212 | 350 | 148 | 290 | 6.00e-51 | 176 |
| MS.gene051660.t1 | AT1G26260 | 64.583 | 144 | 45 | 2 | 212 | 350 | 170 | 312 | 9.27e-51 | 176 |
| MS.gene051660.t1 | AT1G26260 | 64.583 | 144 | 45 | 2 | 212 | 350 | 170 | 312 | 9.27e-51 | 176 |
| MS.gene051660.t1 | AT1G26260 | 64.583 | 144 | 45 | 2 | 212 | 350 | 170 | 312 | 9.27e-51 | 176 |
| MS.gene051660.t1 | AT1G26260 | 64.583 | 144 | 45 | 2 | 212 | 350 | 170 | 312 | 9.27e-51 | 176 |
| MS.gene051660.t1 | AT3G07340 | 68.595 | 121 | 37 | 1 | 230 | 350 | 228 | 347 | 3.65e-48 | 170 |
| MS.gene051660.t1 | AT3G07340 | 68.595 | 121 | 37 | 1 | 230 | 350 | 228 | 347 | 6.45e-48 | 170 |
| MS.gene051660.t1 | AT3G23690 | 54.598 | 174 | 65 | 5 | 245 | 408 | 176 | 345 | 2.60e-46 | 164 |
| MS.gene051660.t1 | AT4G34530 | 70.408 | 98 | 29 | 0 | 250 | 347 | 161 | 258 | 3.59e-43 | 154 |
| MS.gene051660.t1 | AT5G48560 | 77.419 | 93 | 20 | 1 | 257 | 348 | 297 | 389 | 6.74e-43 | 157 |
| MS.gene051660.t1 | AT5G48560 | 77.419 | 93 | 20 | 1 | 257 | 348 | 297 | 389 | 1.17e-42 | 157 |
| MS.gene051660.t1 | AT5G50915 | 54.194 | 155 | 54 | 4 | 242 | 396 | 117 | 254 | 3.90e-42 | 150 |
| MS.gene051660.t1 | AT5G50915 | 54.194 | 155 | 54 | 4 | 242 | 396 | 117 | 254 | 3.90e-42 | 150 |
| MS.gene051660.t1 | AT5G50915 | 54.194 | 155 | 54 | 4 | 242 | 396 | 117 | 254 | 5.00e-42 | 150 |
| MS.gene051660.t1 | AT5G50915 | 54.194 | 155 | 54 | 4 | 242 | 396 | 117 | 254 | 5.00e-42 | 150 |
| MS.gene051660.t1 | AT3G57800 | 37.838 | 259 | 122 | 5 | 126 | 346 | 32 | 289 | 2.26e-40 | 148 |
| MS.gene051660.t1 | AT1G59640 | 53.623 | 138 | 57 | 2 | 212 | 349 | 94 | 224 | 3.64e-40 | 144 |
| MS.gene051660.t1 | AT4G36540 | 55.474 | 137 | 55 | 3 | 210 | 345 | 94 | 225 | 4.13e-40 | 145 |
| MS.gene051660.t1 | AT4G36540 | 55.474 | 137 | 55 | 3 | 210 | 345 | 94 | 225 | 4.32e-40 | 145 |
| MS.gene051660.t1 | AT1G59640 | 53.285 | 137 | 57 | 2 | 212 | 348 | 94 | 223 | 6.94e-40 | 146 |
| MS.gene051660.t1 | AT2G18300 | 59.055 | 127 | 34 | 2 | 232 | 340 | 138 | 264 | 1.33e-39 | 145 |
| MS.gene051660.t1 | AT2G18300 | 59.055 | 127 | 34 | 2 | 232 | 340 | 138 | 264 | 1.37e-39 | 145 |
| MS.gene051660.t1 | AT2G18300 | 59.055 | 127 | 34 | 2 | 232 | 340 | 138 | 264 | 2.78e-39 | 145 |
| MS.gene051660.t1 | AT2G42300 | 62.500 | 96 | 36 | 0 | 252 | 347 | 176 | 271 | 1.49e-37 | 138 |
| MS.gene051660.t1 | AT2G42300 | 63.158 | 95 | 35 | 0 | 252 | 346 | 176 | 270 | 1.29e-36 | 137 |
| MS.gene051660.t1 | AT5G62610 | 49.686 | 159 | 67 | 4 | 186 | 332 | 67 | 224 | 1.11e-35 | 133 |
| MS.gene051660.t1 | AT5G62610 | 49.686 | 159 | 67 | 4 | 186 | 332 | 67 | 224 | 1.11e-35 | 133 |
| MS.gene051660.t1 | AT1G18400 | 70.732 | 82 | 24 | 0 | 259 | 340 | 143 | 224 | 6.58e-33 | 124 |
| MS.gene051660.t1 | AT1G18400 | 70.732 | 82 | 24 | 0 | 259 | 340 | 143 | 224 | 1.01e-32 | 124 |
| MS.gene051660.t1 | AT1G73830 | 69.136 | 81 | 25 | 0 | 260 | 340 | 146 | 226 | 8.84e-32 | 122 |
| MS.gene051660.t1 | AT1G73830 | 69.136 | 81 | 25 | 0 | 260 | 340 | 146 | 226 | 9.05e-32 | 122 |
| MS.gene051660.t1 | AT3G57800 | 32.026 | 306 | 122 | 6 | 126 | 346 | 32 | 336 | 1.15e-31 | 125 |
| MS.gene051660.t1 | AT1G25330 | 50.806 | 124 | 50 | 1 | 257 | 369 | 100 | 223 | 2.26e-31 | 120 |
| MS.gene051660.t1 | AT2G24260 | 69.697 | 66 | 19 | 1 | 261 | 326 | 35 | 99 | 3.11e-22 | 95.5 |
| MS.gene051660.t1 | AT5G58010 | 62.963 | 81 | 25 | 2 | 260 | 336 | 98 | 177 | 3.32e-22 | 96.7 |
| MS.gene051660.t1 | AT4G30980 | 71.212 | 66 | 18 | 1 | 261 | 326 | 130 | 194 | 6.78e-22 | 95.9 |
| MS.gene051660.t1 | AT4G30980 | 71.212 | 66 | 18 | 1 | 261 | 326 | 178 | 242 | 1.17e-21 | 96.3 |
| MS.gene051660.t1 | AT2G24260 | 69.697 | 66 | 19 | 1 | 261 | 326 | 138 | 202 | 1.39e-21 | 95.9 |
| MS.gene051660.t1 | AT2G42300 | 68.000 | 50 | 16 | 0 | 252 | 301 | 176 | 225 | 3.89e-17 | 80.5 |
| MS.gene051660.t1 | AT2G42300 | 68.000 | 50 | 16 | 0 | 252 | 301 | 176 | 225 | 3.89e-17 | 80.5 |
| MS.gene051660.t1 | AT2G42300 | 69.388 | 49 | 15 | 0 | 252 | 300 | 176 | 224 | 4.42e-17 | 80.5 |
| MS.gene051660.t1 | AT4G09180 | 42.056 | 107 | 49 | 3 | 241 | 334 | 153 | 259 | 1.40e-15 | 77.0 |
| MS.gene051660.t1 | AT1G35460 | 53.731 | 67 | 31 | 0 | 259 | 325 | 179 | 245 | 1.80e-15 | 76.6 |
| MS.gene051660.t1 | AT2G20180 | 41.053 | 95 | 55 | 1 | 232 | 326 | 178 | 271 | 1.88e-15 | 78.2 |
| MS.gene051660.t1 | AT2G20180 | 41.053 | 95 | 55 | 1 | 232 | 326 | 178 | 271 | 1.88e-15 | 78.2 |
| MS.gene051660.t1 | AT2G20180 | 41.053 | 95 | 55 | 1 | 232 | 326 | 178 | 271 | 1.88e-15 | 78.2 |
| MS.gene051660.t1 | AT2G20180 | 41.053 | 95 | 55 | 1 | 232 | 326 | 249 | 342 | 2.51e-15 | 78.2 |
| MS.gene051660.t1 | AT2G20180 | 41.053 | 95 | 55 | 1 | 232 | 326 | 249 | 342 | 2.51e-15 | 78.2 |
| MS.gene051660.t1 | AT2G20180 | 41.053 | 95 | 55 | 1 | 232 | 326 | 249 | 342 | 2.51e-15 | 78.2 |
| MS.gene051660.t1 | AT2G20180 | 41.053 | 95 | 55 | 1 | 232 | 326 | 249 | 342 | 2.51e-15 | 78.2 |
| MS.gene051660.t1 | AT2G42280 | 54.688 | 64 | 29 | 0 | 261 | 324 | 279 | 342 | 3.42e-15 | 77.0 |
| MS.gene051660.t1 | AT1G09530 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.46e-15 | 77.4 |
| MS.gene051660.t1 | AT1G09530 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.46e-15 | 77.4 |
| MS.gene051660.t1 | AT1G09530 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.46e-15 | 77.4 |
| MS.gene051660.t1 | AT1G09530 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.46e-15 | 77.4 |
| MS.gene051660.t1 | AT1G09530 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.46e-15 | 77.4 |
| MS.gene051660.t1 | AT1G09530 | 53.125 | 64 | 29 | 1 | 263 | 326 | 339 | 401 | 5.46e-15 | 77.4 |
| MS.gene051660.t1 | AT2G42280 | 56.061 | 66 | 27 | 1 | 261 | 324 | 279 | 344 | 6.04e-15 | 76.3 |
| MS.gene051660.t1 | AT1G51140 | 56.250 | 64 | 28 | 0 | 261 | 324 | 304 | 367 | 7.58e-15 | 76.3 |
| MS.gene051660.t1 | AT4G28790 | 35.156 | 128 | 64 | 3 | 211 | 333 | 229 | 342 | 3.73e-14 | 74.3 |
| MS.gene051660.t1 | AT2G20180 | 37.838 | 111 | 55 | 3 | 213 | 323 | 243 | 339 | 4.41e-14 | 73.6 |
| MS.gene051660.t1 | AT4G02590 | 64.179 | 67 | 23 | 1 | 260 | 326 | 82 | 147 | 7.54e-14 | 71.6 |
| MS.gene051660.t1 | AT4G02590 | 64.179 | 67 | 23 | 1 | 260 | 326 | 145 | 210 | 9.87e-14 | 72.0 |
| MS.gene051660.t1 | AT4G02590 | 64.179 | 67 | 23 | 1 | 260 | 326 | 145 | 210 | 9.87e-14 | 72.0 |
| MS.gene051660.t1 | AT4G28800 | 35.338 | 133 | 68 | 6 | 264 | 389 | 252 | 373 | 1.08e-13 | 73.2 |
| MS.gene051660.t1 | AT4G28815 | 55.172 | 58 | 25 | 1 | 264 | 321 | 71 | 127 | 1.08e-13 | 70.9 |
| MS.gene051660.t1 | AT1G03040 | 65.152 | 66 | 22 | 1 | 261 | 326 | 139 | 203 | 1.45e-13 | 71.6 |
| MS.gene051660.t1 | AT1G03040 | 65.152 | 66 | 22 | 1 | 261 | 326 | 144 | 208 | 1.67e-13 | 71.2 |
| MS.gene051660.t1 | AT1G03040 | 64.179 | 67 | 23 | 1 | 260 | 326 | 143 | 208 | 2.88e-13 | 70.9 |
| MS.gene051660.t1 | AT4G28815 | 55.172 | 58 | 25 | 1 | 264 | 321 | 147 | 203 | 3.77e-13 | 70.5 |
| MS.gene051660.t1 | AT4G28790 | 35.897 | 117 | 56 | 3 | 211 | 322 | 229 | 331 | 9.70e-13 | 69.3 |
| MS.gene051660.t1 | AT4G28800 | 52.542 | 59 | 27 | 1 | 264 | 322 | 264 | 321 | 3.43e-12 | 68.6 |
| MS.gene051660.t1 | AT4G00050 | 49.231 | 65 | 32 | 1 | 261 | 325 | 105 | 168 | 7.79e-12 | 66.2 |
| MS.gene051660.t1 | AT2G46970 | 41.250 | 80 | 41 | 2 | 259 | 333 | 216 | 294 | 1.19e-11 | 66.6 |
| MS.gene051660.t1 | AT2G46970 | 41.250 | 80 | 41 | 2 | 259 | 333 | 194 | 272 | 1.39e-11 | 66.2 |
| MS.gene051660.t1 | AT2G46970 | 41.250 | 80 | 41 | 2 | 259 | 333 | 185 | 263 | 1.40e-11 | 66.2 |
| MS.gene051660.t1 | AT4G00050 | 49.231 | 65 | 32 | 1 | 261 | 325 | 207 | 270 | 1.50e-11 | 66.2 |
| MS.gene051660.t1 | AT4G00050 | 49.231 | 65 | 32 | 1 | 261 | 325 | 207 | 270 | 1.67e-11 | 65.9 |
| MS.gene051660.t1 | AT4G33880 | 49.231 | 65 | 32 | 1 | 261 | 325 | 266 | 329 | 1.75e-11 | 65.9 |
| MS.gene051660.t1 | AT2G43140 | 48.485 | 66 | 34 | 0 | 259 | 324 | 229 | 294 | 1.83e-11 | 65.1 |
| MS.gene051660.t1 | AT2G43140 | 48.485 | 66 | 34 | 0 | 259 | 324 | 132 | 197 | 3.82e-11 | 62.8 |
| MS.gene051660.t1 | AT4G36930 | 49.180 | 61 | 30 | 1 | 267 | 327 | 197 | 256 | 9.64e-11 | 63.5 |
Find 110 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATACAGCACTTGACAATT+TGG | 0.175917 | 1.3:+5218221 | MS.gene051660:CDS |
| TTTCCTGATTGTTCAACTTT+TGG | 0.201081 | 1.3:-5216760 | None:intergenic |
| ATCTTATAACCCTCTTGTTT+TGG | 0.236824 | 1.3:+5215927 | MS.gene051660:CDS |
| TTGAGTCAAGCTCATACTTT+TGG | 0.246530 | 1.3:+5215859 | MS.gene051660:CDS |
| ATCCCATTCCATAAAAGTTT+TGG | 0.257326 | 1.3:-5218191 | None:intergenic |
| TATTAGTTCTGTGTCAAATA+TGG | 0.262900 | 1.3:+5215747 | MS.gene051660:CDS |
| AAGATCTTCACTTACATCTT+TGG | 0.264618 | 1.3:-5217633 | None:intergenic |
| TTCTTCTCGTATTAGATAAC+TGG | 0.273389 | 1.3:+5217213 | MS.gene051660:intron |
| TCAGAAATGGTTGGTTCCTT+TGG | 0.277793 | 1.3:+5216045 | MS.gene051660:CDS |
| GCTTAGAAACAAACCTTGTT+TGG | 0.285521 | 1.3:-5216288 | None:intergenic |
| ATCCAAAGGGGTCAAATTAA+TGG | 0.316200 | 1.3:+5216156 | MS.gene051660:CDS |
| TTGCTTCAAGAACTTGTTCC+AGG | 0.318899 | 1.3:+5217027 | MS.gene051660:CDS |
| CAAATTGTCAAGTGCTGTAT+TGG | 0.339868 | 1.3:-5218220 | None:intergenic |
| GCAGCAGCAGCATCATTTCA+TGG | 0.345728 | 1.3:+5215804 | MS.gene051660:CDS |
| CACCATTAATTTGACCCCTT+TGG | 0.347434 | 1.3:-5216158 | None:intergenic |
| ATTCCCAAACGCAAGTTTCC+AGG | 0.357553 | 1.3:+5218007 | MS.gene051660:CDS |
| CTCCAGTCACGCTTAGGACT+TGG | 0.365208 | 1.3:+5217945 | MS.gene051660:CDS |
| TGCAAGACTGTGGCTGTTTG+TGG | 0.374048 | 1.3:-5216860 | None:intergenic |
| TCCTTTGGCCAACATGGGTC+AGG | 0.379373 | 1.3:+5216060 | MS.gene051660:CDS |
| ATTTCATGGCTTCTTCAGCT+TGG | 0.391101 | 1.3:+5215818 | MS.gene051660:CDS |
| TTCTTGTCCATCTTCAGAAA+TGG | 0.392622 | 1.3:+5215723 | MS.gene051660:CDS |
| TTTCATGGCTTCTTCAGCTT+GGG | 0.397346 | 1.3:+5215819 | MS.gene051660:CDS |
| TACCCTGGAAACTTGCGTTT+GGG | 0.399150 | 1.3:-5218010 | None:intergenic |
| GGAATCGGTGGATTTGTTCC+TGG | 0.401252 | 1.3:+5217966 | MS.gene051660:CDS |
| AAGTGGAAGTTTCTCAGAAA+TGG | 0.401403 | 1.3:+5216032 | MS.gene051660:CDS |
| AATACAGCACTTGACAATTT+GGG | 0.404050 | 1.3:+5218222 | MS.gene051660:CDS |
| TCTACATCAAAGTTCAGTTC+CGG | 0.405761 | 1.3:-5217599 | None:intergenic |
| CTACATCAAAGTTCAGTTCC+GGG | 0.407748 | 1.3:-5217598 | None:intergenic |
| TATGTACATGCAGAATGCTT+TGG | 0.415983 | 1.3:+5218158 | MS.gene051660:intron |
| CTTGTTCAATACTCAAACCT+TGG | 0.420686 | 1.3:+5215979 | MS.gene051660:CDS |
| AAATTGTCAAGTGCTGTATT+GGG | 0.430882 | 1.3:-5218219 | None:intergenic |
| TTACCCTGGAAACTTGCGTT+TGG | 0.431578 | 1.3:-5218011 | None:intergenic |
| TTTGGCCAACATGGGTCAGG+TGG | 0.434581 | 1.3:+5216063 | MS.gene051660:CDS |
| TTCCAAGTCCTAAGCGTGAC+TGG | 0.444135 | 1.3:-5217947 | None:intergenic |
| ATCGCTACCTTGTTGCATCC+TGG | 0.450261 | 1.3:-5217045 | None:intergenic |
| GTTGGTTCCTTTGGCCAACA+TGG | 0.452089 | 1.3:+5216054 | MS.gene051660:CDS |
| CAGCCACAGTCTTGCAGAAA+GGG | 0.452630 | 1.3:+5216867 | MS.gene051660:CDS |
| GAACATGTAGCTAACACATC+AGG | 0.456379 | 1.3:+5216087 | MS.gene051660:CDS |
| ACAGGATCTGCACCTGGTAG+TGG | 0.456742 | 1.3:+5216222 | MS.gene051660:CDS |
| CTAATATCCATTTCTGAAGA+TGG | 0.462754 | 1.3:-5215730 | None:intergenic |
| AAACCAAAAGTTGAACAATC+AGG | 0.463056 | 1.3:+5216757 | MS.gene051660:CDS |
| ATCCACAAGATTCCTTCCTA+TGG | 0.466206 | 1.3:+5216009 | MS.gene051660:CDS |
| TGTGCAATCACTGCAGCAAC+AGG | 0.471611 | 1.3:+5217269 | MS.gene051660:CDS |
| TATTCAACACACTATAACTC+TGG | 0.473092 | 1.3:-5218628 | None:intergenic |
| AAAGTTCAGTTCCGGGTTCA+CGG | 0.473106 | 1.3:-5217591 | None:intergenic |
| TAGATTCTCCAGTCACGCTT+AGG | 0.473536 | 1.3:+5217939 | MS.gene051660:intron |
| ATTCACGAGGATGGAGGTAC+AGG | 0.478235 | 1.3:+5216204 | MS.gene051660:CDS |
| TGGAAACTTGCGTTTGGGAA+TGG | 0.479393 | 1.3:-5218005 | None:intergenic |
| TTATAATGCTGTGACGGAAT+TGG | 0.483604 | 1.3:-5216114 | None:intergenic |
| CGCTTAGGACTTGGAATCGG+TGG | 0.488486 | 1.3:+5217954 | MS.gene051660:CDS |
| ACAGTTCCCTCCTTTGCCTC+AGG | 0.492804 | 1.3:+5218061 | MS.gene051660:CDS |
| ATCACTGCAGCAACAGGTTG+AGG | 0.493756 | 1.3:+5217275 | MS.gene051660:CDS |
| CGCAAGTTTCCAGGGTAACA+TGG | 0.498356 | 1.3:+5218016 | MS.gene051660:CDS |
| TATAATCACATCAAGGATGC+TGG | 0.503047 | 1.3:+5216132 | MS.gene051660:CDS |
| AAAAGATTAGCGAGCGAATG+AGG | 0.508531 | 1.3:+5217004 | MS.gene051660:CDS |
| GAAACTTGCCACCGTGAACC+CGG | 0.509079 | 1.3:+5217580 | MS.gene051660:CDS |
| CAAGGATGCTGGAATCCAAA+GGG | 0.509335 | 1.3:+5216143 | MS.gene051660:CDS |
| AAGATTCCTTCCTATGGAAG+TGG | 0.511892 | 1.3:+5216015 | MS.gene051660:CDS |
| TGAGAAACTTCCACTTCCAT+AGG | 0.519524 | 1.3:-5216025 | None:intergenic |
| TTTCTTCTACTTCCACTACC+AGG | 0.520640 | 1.3:-5216234 | None:intergenic |
| ACAGCCACAGTCTTGCAGAA+AGG | 0.526933 | 1.3:+5216866 | MS.gene051660:CDS |
| GGATGAGAGGAGCTTATACC+AGG | 0.529199 | 1.3:-5217984 | None:intergenic |
| GTTCAATACTCAAACCTTGG+AGG | 0.531231 | 1.3:+5215982 | MS.gene051660:CDS |
| GGAAGTTTCTCAGAAATGGT+TGG | 0.538496 | 1.3:+5216036 | MS.gene051660:CDS |
| TTGGTTCCTTTGGCCAACAT+GGG | 0.538891 | 1.3:+5216055 | MS.gene051660:CDS |
| GATTAGAATGCTGAGGGTGA+TGG | 0.542326 | 1.3:+5216682 | MS.gene051660:intron |
| TCTTTAGAAGCATCTCCACT+TGG | 0.543899 | 1.3:-5216802 | None:intergenic |
| AGTTTCCAGGGTAACATGGC+TGG | 0.548496 | 1.3:+5218020 | MS.gene051660:CDS |
| TCTTGTGGATCATGCCTCCA+AGG | 0.550691 | 1.3:-5215996 | None:intergenic |
| TTGGCCAACATGGGTCAGGT+GGG | 0.552278 | 1.3:+5216064 | MS.gene051660:CDS |
| TTCTTCTTTCAGTCCAAACA+AGG | 0.563605 | 1.3:+5216275 | MS.gene051660:CDS |
| ACCTGACCCATGTTGGCCAA+AGG | 0.569057 | 1.3:-5216061 | None:intergenic |
| TTCCCAAACGCAAGTTTCCA+GGG | 0.570083 | 1.3:+5218008 | MS.gene051660:CDS |
| TCTCCGAGGAAGATTTCTGA+TGG | 0.571010 | 1.3:+5216715 | MS.gene051660:CDS |
| TGGTGAACAATCTCAGATTG+AGG | 0.578059 | 1.3:+5216176 | MS.gene051660:CDS |
| GGGAACTGTGTTGATGAACT+AGG | 0.579147 | 1.3:-5218047 | None:intergenic |
| TCACGCTTAGGACTTGGAAT+CGG | 0.580584 | 1.3:+5217951 | MS.gene051660:CDS |
| GCATGCCAGCCATGTTACCC+TGG | 0.580745 | 1.3:-5218025 | None:intergenic |
| TCAAGGATGCTGGAATCCAA+AGG | 0.589904 | 1.3:+5216142 | MS.gene051660:CDS |
| CCTTGATTCTCCAAAACAAG+AGG | 0.592951 | 1.3:-5215937 | None:intergenic |
| AAACTTCCACTTCCATAGGA+AGG | 0.598638 | 1.3:-5216021 | None:intergenic |
| GAACCATCAGAAATCTTCCT+CGG | 0.600200 | 1.3:-5216718 | None:intergenic |
| GCTTGACTCAATGAAACAAG+TGG | 0.600555 | 1.3:-5215847 | None:intergenic |
| TTCCATAGGAAGGAATCTTG+TGG | 0.606199 | 1.3:-5216011 | None:intergenic |
| GGGTGGTGAGGAAAATGCAA+TGG | 0.606665 | 1.3:+5215669 | MS.gene051660:CDS |
| CTTGACAATTTGGGACCCAA+TGG | 0.608459 | 1.3:+5218231 | MS.gene051660:CDS |
| TGGCCAACATGGGTCAGGTG+GGG | 0.608930 | 1.3:+5216065 | MS.gene051660:CDS |
| GAGGACTCTATTCACGAGGA+TGG | 0.609630 | 1.3:+5216195 | MS.gene051660:CDS |
| TGCGTTTGGGAATGGATGAG+AGG | 0.610999 | 1.3:-5217997 | None:intergenic |
| CTTGATTCTCCAAAACAAGA+GGG | 0.612056 | 1.3:-5215936 | None:intergenic |
| ACAGCATTATAATCACATCA+AGG | 0.612775 | 1.3:+5216125 | MS.gene051660:CDS |
| GAGGTTGGATTAGAATGCTG+AGG | 0.619937 | 1.3:+5216675 | MS.gene051660:intron |
| AACTGAACTTTGATGTAGAG+CGG | 0.623663 | 1.3:+5217603 | MS.gene051660:CDS |
| GTTCCCCACCTGACCCATGT+TGG | 0.625912 | 1.3:-5216068 | None:intergenic |
| GAATTAAGAGATGGGTGGTG+AGG | 0.626693 | 1.3:+5215657 | None:intergenic |
| AACATGTAGCTAACACATCA+GGG | 0.630115 | 1.3:+5216088 | MS.gene051660:CDS |
| GGAGGTACAGGATCTGCACC+TGG | 0.632655 | 1.3:+5216216 | MS.gene051660:CDS |
| GCTAAAGACAACTCTCCAAG+TGG | 0.635670 | 1.3:+5216787 | MS.gene051660:CDS |
| GTACCCTTTCTGCAAGACTG+TGG | 0.636291 | 1.3:-5216870 | None:intergenic |
| AATGCAATGGAGTTTCAACA+TGG | 0.644756 | 1.3:+5215682 | MS.gene051660:CDS |
| GACTCTATTCACGAGGATGG+AGG | 0.650722 | 1.3:+5216198 | MS.gene051660:CDS |
| AGGTTGGATTAGAATGCTGA+GGG | 0.650823 | 1.3:+5216676 | MS.gene051660:intron |
| ATTCATGTGAGAGCTAGAAG+AGG | 0.658128 | 1.3:+5216832 | MS.gene051660:CDS |
| TTCTTGAATTAAGAGATGGG+TGG | 0.661303 | 1.3:+5215652 | None:intergenic |
| ATGTGATTATAATGCTGTGA+CGG | 0.663370 | 1.3:-5216120 | None:intergenic |
| ACTTGTTCCAGGATGCAACA+AGG | 0.687844 | 1.3:+5217038 | MS.gene051660:CDS |
| GATTGAGGACTCTATTCACG+AGG | 0.712793 | 1.3:+5216191 | MS.gene051660:CDS |
| AAGGATGCTGGAATCCAAAG+GGG | 0.724973 | 1.3:+5216144 | MS.gene051660:CDS |
| ATGGAGTGAAAGATTCTCCG+AGG | 0.725092 | 1.3:+5216701 | MS.gene051660:CDS |
| GTTCAGTTCCGGGTTCACGG+TGG | 0.752023 | 1.3:-5217588 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATGAAAAAAGAGTAAA+TGG | - | chr1.3:5218550-5218569 | None:intergenic | 20.0% |
| !! | AATCATAATTGTGTATTAAC+TGG | - | chr1.3:5217896-5217915 | None:intergenic | 20.0% |
| !! | ACTAACAAAAAATACATTCA+AGG | + | chr1.3:5218424-5218443 | MS.gene051660:intron | 20.0% |
| !! | ATATAAGACATTTCATTCAT+TGG | - | chr1.3:5216513-5216532 | None:intergenic | 20.0% |
| !! | TATATCAATGAATCTCATAT+AGG | + | chr1.3:5216583-5216602 | MS.gene051660:intron | 20.0% |
| !!! | ATTTAATTGTCTTGTTTATG+AGG | + | chr1.3:5216615-5216634 | MS.gene051660:intron | 20.0% |
| !!! | ATTTGGACATATTTAAGATT+TGG | - | chr1.3:5217769-5217788 | None:intergenic | 20.0% |
| !!! | TTAGTTGTTAATTTGTTAGA+GGG | + | chr1.3:5216371-5216390 | MS.gene051660:intron | 20.0% |
| ! | AAAGAAATGCCTTATATATG+AGG | + | chr1.3:5216656-5216675 | MS.gene051660:intron | 25.0% |
| ! | AAATGTCTTATATATGAGCT+TGG | + | chr1.3:5216520-5216539 | MS.gene051660:intron | 25.0% |
| ! | AATTTATTTCCATGTTGAAC+AGG | + | chr1.3:5218595-5218614 | MS.gene051660:intron | 25.0% |
| ! | ATTTATTTCCATGTTGAACA+GGG | + | chr1.3:5218596-5218615 | MS.gene051660:intron | 25.0% |
| ! | GTCGTAACTTATAACTTATT+TGG | + | chr1.3:5217107-5217126 | MS.gene051660:intron | 25.0% |
| ! | GTTAAGATGATTGTGTTAAA+TGG | + | chr1.3:5217071-5217090 | MS.gene051660:intron | 25.0% |
| ! | TATATCAATGAATCTTATGC+AGG | + | chr1.3:5216326-5216345 | MS.gene051660:intron | 25.0% |
| !! | AACAGCTTTATAGTATAAGA+TGG | - | chr1.3:5216912-5216931 | None:intergenic | 25.0% |
| !! | ATCTTTTGCTAGTTATTAAG+CGG | + | chr1.3:5218370-5218389 | MS.gene051660:intron | 25.0% |
| !! | ATTTTTATCCTTGAATGTGT+CGG | - | chr1.3:5218525-5218544 | None:intergenic | 25.0% |
| !! | GCTTCAATTCCATTATATTT+TGG | + | chr1.3:5217507-5217526 | MS.gene051660:intron | 25.0% |
| !! | TTCCAAAACTTTTATGGAAT+GGG | + | chr1.3:5218189-5218208 | MS.gene051660:CDS | 25.0% |
| !! | TTGATACTTTAAAGATTGCA+AGG | - | chr1.3:5217314-5217333 | None:intergenic | 25.0% |
| !!! | GTTAGTTGTTAATTTGTTAG+AGG | + | chr1.3:5216370-5216389 | MS.gene051660:intron | 25.0% |
| !!! | TATTAGTTCTGTGTCAAATA+TGG | + | chr1.3:5215747-5215766 | MS.gene051660:CDS | 25.0% |
| AAACCAAAAGTTGAACAATC+AGG | + | chr1.3:5216757-5216776 | MS.gene051660:CDS | 30.0% | |
| AAATGCCTTATATATGAGGT+TGG | + | chr1.3:5216660-5216679 | MS.gene051660:intron | 30.0% | |
| AAGATCTTCACTTACATCTT+TGG | - | chr1.3:5217636-5217655 | None:intergenic | 30.0% | |
| AATACAGCACTTGACAATTT+GGG | + | chr1.3:5218222-5218241 | MS.gene051660:CDS | 30.0% | |
| ACAGCATTATAATCACATCA+AGG | + | chr1.3:5216125-5216144 | MS.gene051660:CDS | 30.0% | |
| ACTAGCAAAAGATACACTTA+AGG | - | chr1.3:5218363-5218382 | None:intergenic | 30.0% | |
| AGACAATGTTACTACAGTAT+CGG | + | chr1.3:5218314-5218333 | MS.gene051660:intron | 30.0% | |
| ATATGTCCAAATATCAGTCA+TGG | + | chr1.3:5217777-5217796 | MS.gene051660:intron | 30.0% | |
| ATGTGATTATAATGCTGTGA+CGG | - | chr1.3:5216123-5216142 | None:intergenic | 30.0% | |
| CCAGGAAAACCAAAATATAA+TGG | - | chr1.3:5217519-5217538 | None:intergenic | 30.0% | |
| CTAATCCAACCTCATATATA+AGG | - | chr1.3:5216668-5216687 | None:intergenic | 30.0% | |
| TCTTTATACGATAAATAGCC+AGG | - | chr1.3:5217537-5217556 | None:intergenic | 30.0% | |
| TTCTTCTCGTATTAGATAAC+TGG | + | chr1.3:5217213-5217232 | MS.gene051660:intron | 30.0% | |
| TTGTATAGGACTTGTATTGT+TGG | + | chr1.3:5216457-5216476 | MS.gene051660:intron | 30.0% | |
| ! | AAATTGTCAAGTGCTGTATT+GGG | - | chr1.3:5218222-5218241 | None:intergenic | 30.0% |
| ! | AGCTTTATAGTATAAGATGG+TGG | - | chr1.3:5216909-5216928 | None:intergenic | 30.0% |
| ! | ATCCCATTCCATAAAAGTTT+TGG | - | chr1.3:5218194-5218213 | None:intergenic | 30.0% |
| ! | ATCTTTACTCTTTTTACCTG+AGG | - | chr1.3:5218080-5218099 | None:intergenic | 30.0% |
| ! | CATGACTTCCAAAACTTTTA+TGG | + | chr1.3:5218183-5218202 | MS.gene051660:CDS | 30.0% |
| ! | CTAATATCCATTTCTGAAGA+TGG | - | chr1.3:5215733-5215752 | None:intergenic | 30.0% |
| ! | CTTCCAAAACTTTTATGGAA+TGG | + | chr1.3:5218188-5218207 | MS.gene051660:CDS | 30.0% |
| ! | TTGGATTAGATCAAACTTTG+TGG | + | chr1.3:5216539-5216558 | MS.gene051660:intron | 30.0% |
| ! | TTTATAGTATAAGATGGTGG+TGG | - | chr1.3:5216906-5216925 | None:intergenic | 30.0% |
| ! | TTTCCTGATTGTTCAACTTT+TGG | - | chr1.3:5216763-5216782 | None:intergenic | 30.0% |
| !! | ATCTTATAACCCTCTTGTTT+TGG | + | chr1.3:5215927-5215946 | MS.gene051660:CDS | 30.0% |
| !! | GTTTGTTTCTAAGCTAAGTT+TGG | + | chr1.3:5216297-5216316 | MS.gene051660:intron | 30.0% |
| !!! | CATAAAAGTTTTGGAAGTCA+TGG | - | chr1.3:5218185-5218204 | None:intergenic | 30.0% |
| !!! | CCATTATATTTTGGTTTTCC+TGG | + | chr1.3:5217516-5217535 | MS.gene051660:intron | 30.0% |
| !!! | GTTGGTTTGTTTTGTTTATG+AGG | + | chr1.3:5216475-5216494 | MS.gene051660:intron | 30.0% |
| !!! | TTCCTTTTTTTGATTTCCCT+TGG | - | chr1.3:5217397-5217416 | None:intergenic | 30.0% |
| AAATATCAGTCATGGTCTCA+TGG | + | chr1.3:5217785-5217804 | MS.gene051660:intron | 35.0% | |
| AACATGTAGCTAACACATCA+GGG | + | chr1.3:5216088-5216107 | MS.gene051660:CDS | 35.0% | |
| AACTGAACTTTGATGTAGAG+CGG | + | chr1.3:5217603-5217622 | MS.gene051660:CDS | 35.0% | |
| AAGTGAACTATTCACTTTGG+AGG | + | chr1.3:5217680-5217699 | MS.gene051660:intron | 35.0% | |
| AAGTGAATAGTTCACTTCCA+AGG | - | chr1.3:5217677-5217696 | None:intergenic | 35.0% | |
| AAGTGGAAGTTTCTCAGAAA+TGG | + | chr1.3:5216032-5216051 | MS.gene051660:CDS | 35.0% | |
| AATGCAATGGAGTTTCAACA+TGG | + | chr1.3:5215682-5215701 | MS.gene051660:CDS | 35.0% | |
| ACTAATGAGAGACACATTTG+AGG | + | chr1.3:5218456-5218475 | MS.gene051660:intron | 35.0% | |
| AGATTCTGCCTATTTACCAT+TGG | - | chr1.3:5218250-5218269 | None:intergenic | 35.0% | |
| AGTGAACTATTCACTTTGGA+GGG | + | chr1.3:5217681-5217700 | MS.gene051660:intron | 35.0% | |
| AGTGGAAGTAGAAGAAAAAG+AGG | + | chr1.3:5216240-5216259 | MS.gene051660:CDS | 35.0% | |
| AGTTATTAAGCGGCTAATAG+AGG | + | chr1.3:5218380-5218399 | MS.gene051660:intron | 35.0% | |
| ATCCAAAGGGGTCAAATTAA+TGG | + | chr1.3:5216156-5216175 | MS.gene051660:CDS | 35.0% | |
| ATGAGACCATGACTGATATT+TGG | - | chr1.3:5217786-5217805 | None:intergenic | 35.0% | |
| CAAATGTGTCTCTCATTAGT+CGG | - | chr1.3:5218456-5218475 | None:intergenic | 35.0% | |
| CAATACAGCACTTGACAATT+TGG | + | chr1.3:5218221-5218240 | MS.gene051660:CDS | 35.0% | |
| CACCAAGGGAAATCAAAAAA+AGG | + | chr1.3:5217392-5217411 | MS.gene051660:intron | 35.0% | |
| CCTGATTTATCGAACTTCAT+CGG | + | chr1.3:5216430-5216449 | MS.gene051660:intron | 35.0% | |
| CTTGATTCTCCAAAACAAGA+GGG | - | chr1.3:5215939-5215958 | None:intergenic | 35.0% | |
| CTTGTTCAATACTCAAACCT+TGG | + | chr1.3:5215979-5215998 | MS.gene051660:CDS | 35.0% | |
| GATTCTGCCTATTTACCATT+GGG | - | chr1.3:5218249-5218268 | None:intergenic | 35.0% | |
| GCTTAGAAACAAACCTTGTT+TGG | - | chr1.3:5216291-5216310 | None:intergenic | 35.0% | |
| TAAGCATATCGTTACATCGA+TGG | - | chr1.3:5217744-5217763 | None:intergenic | 35.0% | |
| TATAATCACATCAAGGATGC+TGG | + | chr1.3:5216132-5216151 | MS.gene051660:CDS | 35.0% | |
| TATGTACATGCAGAATGCTT+TGG | + | chr1.3:5218158-5218177 | MS.gene051660:intron | 35.0% | |
| TCTACATCAAAGTTCAGTTC+CGG | - | chr1.3:5217602-5217621 | None:intergenic | 35.0% | |
| TGGAAGTGAACTATTCACTT+TGG | + | chr1.3:5217677-5217696 | MS.gene051660:intron | 35.0% | |
| TTCTTCTTTCAGTCCAAACA+AGG | + | chr1.3:5216275-5216294 | MS.gene051660:CDS | 35.0% | |
| TTCTTGTCCATCTTCAGAAA+TGG | + | chr1.3:5215723-5215742 | MS.gene051660:CDS | 35.0% | |
| ! | CAAATTGTCAAGTGCTGTAT+TGG | - | chr1.3:5218223-5218242 | None:intergenic | 35.0% |
| ! | TTATAATGCTGTGACGGAAT+TGG | - | chr1.3:5216117-5216136 | None:intergenic | 35.0% |
| ! | TTGAGTCAAGCTCATACTTT+TGG | + | chr1.3:5215859-5215878 | MS.gene051660:CDS | 35.0% |
| !! | TACTTTTGGAGGTTCTTCAA+TGG | + | chr1.3:5215873-5215892 | MS.gene051660:CDS | 35.0% |
| !!! | ACTTCTGTTTTTGCTTTTGC+AGG | + | chr1.3:5216972-5216991 | MS.gene051660:intron | 35.0% |
| !!! | CTCTTGTTTTGGAGAATCAA+GGG | + | chr1.3:5215938-5215957 | MS.gene051660:CDS | 35.0% |
| AAAAGATTAGCGAGCGAATG+AGG | + | chr1.3:5217004-5217023 | MS.gene051660:CDS | 40.0% | |
| AAACTTCCACTTCCATAGGA+AGG | - | chr1.3:5216024-5216043 | None:intergenic | 40.0% | |
| AAGATTCCTTCCTATGGAAG+TGG | + | chr1.3:5216015-5216034 | MS.gene051660:CDS | 40.0% | |
| ATCATACAGATTCGACTCCT+TGG | + | chr1.3:5217657-5217676 | MS.gene051660:intron | 40.0% | |
| ATCCACAAGATTCCTTCCTA+TGG | + | chr1.3:5216009-5216028 | MS.gene051660:CDS | 40.0% | |
| ATTCATGTGAGAGCTAGAAG+AGG | + | chr1.3:5216832-5216851 | MS.gene051660:CDS | 40.0% | |
| ATTTCATGGCTTCTTCAGCT+TGG | + | chr1.3:5215818-5215837 | MS.gene051660:CDS | 40.0% | |
| CCGATGAAGTTCGATAAATC+AGG | - | chr1.3:5216433-5216452 | None:intergenic | 40.0% | |
| CCTTGATTCTCCAAAACAAG+AGG | - | chr1.3:5215940-5215959 | None:intergenic | 40.0% | |
| CTACATCAAAGTTCAGTTCC+GGG | - | chr1.3:5217601-5217620 | None:intergenic | 40.0% | |
| GAACATGTAGCTAACACATC+AGG | + | chr1.3:5216087-5216106 | MS.gene051660:CDS | 40.0% | |
| GAACCATCAGAAATCTTCCT+CGG | - | chr1.3:5216721-5216740 | None:intergenic | 40.0% | |
| GCTTGACTCAATGAAACAAG+TGG | - | chr1.3:5215850-5215869 | None:intergenic | 40.0% | |
| GGAAGTTTCTCAGAAATGGT+TGG | + | chr1.3:5216036-5216055 | MS.gene051660:CDS | 40.0% | |
| GTTCAATACTCAAACCTTGG+AGG | + | chr1.3:5215982-5216001 | MS.gene051660:CDS | 40.0% | |
| TATTTCCATGTTGAACAGGG+AGG | + | chr1.3:5218599-5218618 | MS.gene051660:intron | 40.0% | |
| TGAGAAACTTCCACTTCCAT+AGG | - | chr1.3:5216028-5216047 | None:intergenic | 40.0% | |
| TGGTGAACAATCTCAGATTG+AGG | + | chr1.3:5216176-5216195 | MS.gene051660:CDS | 40.0% | |
| TTCCATAGGAAGGAATCTTG+TGG | - | chr1.3:5216014-5216033 | None:intergenic | 40.0% | |
| TTTATCCTTGAATGTGTCGG+TGG | - | chr1.3:5218522-5218541 | None:intergenic | 40.0% | |
| TTTCATGGCTTCTTCAGCTT+GGG | + | chr1.3:5215819-5215838 | MS.gene051660:CDS | 40.0% | |
| TTTCTTCTACTTCCACTACC+AGG | - | chr1.3:5216237-5216256 | None:intergenic | 40.0% | |
| ! | ACTCTTTTTACCTGAGGCAA+AGG | - | chr1.3:5218074-5218093 | None:intergenic | 40.0% |
| ! | ACTTCATCGGTGTCTTGTAT+AGG | + | chr1.3:5216443-5216462 | MS.gene051660:intron | 40.0% |
| ! | AGGTTGGATTAGAATGCTGA+GGG | + | chr1.3:5216676-5216695 | MS.gene051660:intron | 40.0% |
| ! | AGTCAAGCTCATACTTTTGG+AGG | + | chr1.3:5215862-5215881 | MS.gene051660:CDS | 40.0% |
| ! | CACCATTAATTTGACCCCTT+TGG | - | chr1.3:5216161-5216180 | None:intergenic | 40.0% |
| ! | TCAGAAATGGTTGGTTCCTT+TGG | + | chr1.3:5216045-5216064 | MS.gene051660:CDS | 40.0% |
| ! | TTGCTTCAAGAACTTGTTCC+AGG | + | chr1.3:5217027-5217046 | MS.gene051660:CDS | 40.0% |
| ! | TTTGGGACCCAATGGTAAAT+AGG | + | chr1.3:5218239-5218258 | MS.gene051660:intron | 40.0% |
| ! | TTTTTACCTGAGGCAAAGGA+GGG | - | chr1.3:5218070-5218089 | None:intergenic | 40.0% |
| !! | TCTTTAGAAGCATCTCCACT+TGG | - | chr1.3:5216805-5216824 | None:intergenic | 40.0% |
| !!! | CCTCTTGTTTTGGAGAATCA+AGG | + | chr1.3:5215937-5215956 | MS.gene051660:CDS | 40.0% |
| AAAGTTCAGTTCCGGGTTCA+CGG | - | chr1.3:5217594-5217613 | None:intergenic | 45.0% | |
| AAGGATGCTGGAATCCAAAG+GGG | + | chr1.3:5216144-5216163 | MS.gene051660:CDS | 45.0% | |
| ACTTGTTCCAGGATGCAACA+AGG | + | chr1.3:5217038-5217057 | MS.gene051660:CDS | 45.0% | |
| ATGGAGTGAAAGATTCTCCG+AGG | + | chr1.3:5216701-5216720 | MS.gene051660:CDS | 45.0% | |
| ATTCCCAAACGCAAGTTTCC+AGG | + | chr1.3:5218007-5218026 | MS.gene051660:CDS | 45.0% | |
| CAAGGATGCTGGAATCCAAA+GGG | + | chr1.3:5216143-5216162 | MS.gene051660:CDS | 45.0% | |
| GATGCAACAAGGTAGCGATT+TGG | + | chr1.3:5217049-5217068 | MS.gene051660:intron | 45.0% | |
| GATTAGAATGCTGAGGGTGA+TGG | + | chr1.3:5216682-5216701 | MS.gene051660:intron | 45.0% | |
| GATTGAGGACTCTATTCACG+AGG | + | chr1.3:5216191-5216210 | MS.gene051660:CDS | 45.0% | |
| GCTAAAGACAACTCTCCAAG+TGG | + | chr1.3:5216787-5216806 | MS.gene051660:CDS | 45.0% | |
| GTGCACATGCTTAACACCAA+GGG | + | chr1.3:5217378-5217397 | MS.gene051660:intron | 45.0% | |
| TACCCTGGAAACTTGCGTTT+GGG | - | chr1.3:5218013-5218032 | None:intergenic | 45.0% | |
| TAGATTCTCCAGTCACGCTT+AGG | + | chr1.3:5217939-5217958 | MS.gene051660:intron | 45.0% | |
| TCAAGGATGCTGGAATCCAA+AGG | + | chr1.3:5216142-5216161 | MS.gene051660:CDS | 45.0% | |
| TCACGCTTAGGACTTGGAAT+CGG | + | chr1.3:5217951-5217970 | MS.gene051660:CDS | 45.0% | |
| TCTCCGAGGAAGATTTCTGA+TGG | + | chr1.3:5216715-5216734 | MS.gene051660:CDS | 45.0% | |
| TGGAAACTTGCGTTTGGGAA+TGG | - | chr1.3:5218008-5218027 | None:intergenic | 45.0% | |
| TGTGCACATGCTTAACACCA+AGG | + | chr1.3:5217377-5217396 | MS.gene051660:intron | 45.0% | |
| TTACCCTGGAAACTTGCGTT+TGG | - | chr1.3:5218014-5218033 | None:intergenic | 45.0% | |
| TTCAACCTCCCTGTTCAACA+TGG | - | chr1.3:5218607-5218626 | None:intergenic | 45.0% | |
| TTCCCAAACGCAAGTTTCCA+GGG | + | chr1.3:5218008-5218027 | MS.gene051660:CDS | 45.0% | |
| TTGGTTCCTTTGGCCAACAT+GGG | + | chr1.3:5216055-5216074 | MS.gene051660:CDS | 45.0% | |
| ! | CTTGACAATTTGGGACCCAA+TGG | + | chr1.3:5218231-5218250 | MS.gene051660:CDS | 45.0% |
| ! | CTTTTTACCTGAGGCAAAGG+AGG | - | chr1.3:5218071-5218090 | None:intergenic | 45.0% |
| ! | GAGGTTGGATTAGAATGCTG+AGG | + | chr1.3:5216675-5216694 | MS.gene051660:intron | 45.0% |
| ! | GGGAACTGTGTTGATGAACT+AGG | - | chr1.3:5218050-5218069 | None:intergenic | 45.0% |
| ACAGCCACAGTCTTGCAGAA+AGG | + | chr1.3:5216866-5216885 | MS.gene051660:CDS | 50.0% | |
| AGTTTCCAGGGTAACATGGC+TGG | + | chr1.3:5218020-5218039 | MS.gene051660:CDS | 50.0% | |
| ATCACTGCAGCAACAGGTTG+AGG | + | chr1.3:5217275-5217294 | MS.gene051660:CDS | 50.0% | |
| ATCGCTACCTTGTTGCATCC+TGG | - | chr1.3:5217048-5217067 | None:intergenic | 50.0% | |
| CAGCCACAGTCTTGCAGAAA+GGG | + | chr1.3:5216867-5216886 | MS.gene051660:CDS | 50.0% | |
| CGATACCACCGACACATTCA+AGG | + | chr1.3:5218514-5218533 | MS.gene051660:intron | 50.0% | |
| CGCAAGTTTCCAGGGTAACA+TGG | + | chr1.3:5218016-5218035 | MS.gene051660:CDS | 50.0% | |
| GACTCTATTCACGAGGATGG+AGG | + | chr1.3:5216198-5216217 | MS.gene051660:CDS | 50.0% | |
| GAGGACTCTATTCACGAGGA+TGG | + | chr1.3:5216195-5216214 | MS.gene051660:CDS | 50.0% | |
| GCAGCAGCAGCATCATTTCA+TGG | + | chr1.3:5215804-5215823 | MS.gene051660:CDS | 50.0% | |
| GGATGAGAGGAGCTTATACC+AGG | - | chr1.3:5217987-5218006 | None:intergenic | 50.0% | |
| GGGTGGTGAGGAAAATGCAA+TGG | + | chr1.3:5215669-5215688 | MS.gene051660:CDS | 50.0% | |
| GTACCCTTTCTGCAAGACTG+TGG | - | chr1.3:5216873-5216892 | None:intergenic | 50.0% | |
| TCTTGTGGATCATGCCTCCA+AGG | - | chr1.3:5215999-5216018 | None:intergenic | 50.0% | |
| TGCAAGACTGTGGCTGTTTG+TGG | - | chr1.3:5216863-5216882 | None:intergenic | 50.0% | |
| TGCGTTTGGGAATGGATGAG+AGG | - | chr1.3:5218000-5218019 | None:intergenic | 50.0% | |
| TGTGCAATCACTGCAGCAAC+AGG | + | chr1.3:5217269-5217288 | MS.gene051660:CDS | 50.0% | |
| TTCCAAGTCCTAAGCGTGAC+TGG | - | chr1.3:5217950-5217969 | None:intergenic | 50.0% | |
| ! | ATTCACGAGGATGGAGGTAC+AGG | + | chr1.3:5216204-5216223 | MS.gene051660:CDS | 50.0% |
| ! | GGAATCGGTGGATTTGTTCC+TGG | + | chr1.3:5217966-5217985 | MS.gene051660:CDS | 50.0% |
| ! | GTTGGTTCCTTTGGCCAACA+TGG | + | chr1.3:5216054-5216073 | MS.gene051660:CDS | 50.0% |
| ACAGGATCTGCACCTGGTAG+TGG | + | chr1.3:5216222-5216241 | MS.gene051660:CDS | 55.0% | |
| ACAGTTCCCTCCTTTGCCTC+AGG | + | chr1.3:5218061-5218080 | MS.gene051660:CDS | 55.0% | |
| ACCTGACCCATGTTGGCCAA+AGG | - | chr1.3:5216064-5216083 | None:intergenic | 55.0% | |
| CGCTTAGGACTTGGAATCGG+TGG | + | chr1.3:5217954-5217973 | MS.gene051660:CDS | 55.0% | |
| CTCCAGTCACGCTTAGGACT+TGG | + | chr1.3:5217945-5217964 | MS.gene051660:CDS | 55.0% | |
| GAAACTTGCCACCGTGAACC+CGG | + | chr1.3:5217580-5217599 | MS.gene051660:CDS | 55.0% | |
| TCCTTTGGCCAACATGGGTC+AGG | + | chr1.3:5216060-5216079 | MS.gene051660:CDS | 55.0% | |
| TTGGCCAACATGGGTCAGGT+GGG | + | chr1.3:5216064-5216083 | MS.gene051660:CDS | 55.0% | |
| TTTGGCCAACATGGGTCAGG+TGG | + | chr1.3:5216063-5216082 | MS.gene051660:CDS | 55.0% | |
| GCATGCCAGCCATGTTACCC+TGG | - | chr1.3:5218028-5218047 | None:intergenic | 60.0% | |
| GTTCAGTTCCGGGTTCACGG+TGG | - | chr1.3:5217591-5217610 | None:intergenic | 60.0% | |
| GTTCCCCACCTGACCCATGT+TGG | - | chr1.3:5216071-5216090 | None:intergenic | 60.0% | |
| TGGCCAACATGGGTCAGGTG+GGG | + | chr1.3:5216065-5216084 | MS.gene051660:CDS | 60.0% | |
| ! | GGAGGTACAGGATCTGCACC+TGG | + | chr1.3:5216216-5216235 | MS.gene051660:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5215667 | 5218639 | 5215667 | ID=MS.gene051660 |
| chr1.3 | mRNA | 5215667 | 5218639 | 5215667 | ID=MS.gene051660.t1;Parent=MS.gene051660 |
| chr1.3 | exon | 5215667 | 5216296 | 5215667 | ID=MS.gene051660.t1.exon1;Parent=MS.gene051660.t1 |
| chr1.3 | CDS | 5215667 | 5216296 | 5215667 | ID=cds.MS.gene051660.t1;Parent=MS.gene051660.t1 |
| chr1.3 | exon | 5216688 | 5216888 | 5216688 | ID=MS.gene051660.t1.exon2;Parent=MS.gene051660.t1 |
| chr1.3 | CDS | 5216688 | 5216888 | 5216688 | ID=cds.MS.gene051660.t1;Parent=MS.gene051660.t1 |
| chr1.3 | exon | 5216994 | 5217059 | 5216994 | ID=MS.gene051660.t1.exon3;Parent=MS.gene051660.t1 |
| chr1.3 | CDS | 5216994 | 5217059 | 5216994 | ID=cds.MS.gene051660.t1;Parent=MS.gene051660.t1 |
| chr1.3 | exon | 5217228 | 5217296 | 5217228 | ID=MS.gene051660.t1.exon4;Parent=MS.gene051660.t1 |
| chr1.3 | CDS | 5217228 | 5217296 | 5217228 | ID=cds.MS.gene051660.t1;Parent=MS.gene051660.t1 |
| chr1.3 | exon | 5217569 | 5217640 | 5217569 | ID=MS.gene051660.t1.exon5;Parent=MS.gene051660.t1 |
| chr1.3 | CDS | 5217569 | 5217640 | 5217569 | ID=cds.MS.gene051660.t1;Parent=MS.gene051660.t1 |
| chr1.3 | exon | 5217942 | 5218082 | 5217942 | ID=MS.gene051660.t1.exon6;Parent=MS.gene051660.t1 |
| chr1.3 | CDS | 5217942 | 5218082 | 5217942 | ID=cds.MS.gene051660.t1;Parent=MS.gene051660.t1 |
| chr1.3 | exon | 5218171 | 5218252 | 5218171 | ID=MS.gene051660.t1.exon7;Parent=MS.gene051660.t1 |
| chr1.3 | CDS | 5218171 | 5218252 | 5218171 | ID=cds.MS.gene051660.t1;Parent=MS.gene051660.t1 |
| chr1.3 | exon | 5218617 | 5218639 | 5218617 | ID=MS.gene051660.t1.exon8;Parent=MS.gene051660.t1 |
| chr1.3 | CDS | 5218617 | 5218639 | 5218617 | ID=cds.MS.gene051660.t1;Parent=MS.gene051660.t1 |
| Gene Sequence |
| Protein sequence |
