Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22809.t1 | XP_003626551.2 | 98.4 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.00E+00 | 1161.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22809.t1 | A0A1J6KGJ9 | 73.9 | 578 | 146 | 2 | 1 | 578 | 4 | 576 | 8.1e-257 | 887.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22809.t1 | G7L419 | 98.4 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0e+00 | 1161.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050633 | MS.gene22809 | 0.912613 | 1.59E-83 | -1.69E-46 |
| MS.gene050657 | MS.gene22809 | 0.803192 | 3.92E-49 | -1.69E-46 |
| MS.gene053147 | MS.gene22809 | 0.808058 | 3.73E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene22809 | 0.825191 | 5.36E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene22809 | 0.803897 | 2.80E-49 | -1.69E-46 |
| MS.gene054581 | MS.gene22809 | 0.823024 | 1.73E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78774 | MS.gene22809 | PPI |
| MS.gene064168 | MS.gene22809 | PPI |
| MS.gene95748 | MS.gene22809 | PPI |
| MS.gene045936 | MS.gene22809 | PPI |
| MS.gene25516 | MS.gene22809 | PPI |
| MS.gene073214 | MS.gene22809 | PPI |
| MS.gene053964 | MS.gene22809 | PPI |
| MS.gene22809 | MS.gene046033 | PPI |
| MS.gene22809 | MS.gene99230 | PPI |
| MS.gene22809 | MS.gene34650 | PPI |
| MS.gene36841 | MS.gene22809 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22809.t1 | MTR_7g117110 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
| MS.gene22809.t1 | MTR_8g027920 | 74.439 | 579 | 144 | 1 | 1 | 579 | 1 | 575 | 0.0 | 924 |
| MS.gene22809.t1 | MTR_8g027955 | 73.402 | 579 | 150 | 1 | 1 | 579 | 8 | 582 | 0.0 | 905 |
| MS.gene22809.t1 | MTR_8g027965 | 73.575 | 579 | 149 | 1 | 1 | 579 | 1 | 575 | 0.0 | 904 |
| MS.gene22809.t1 | MTR_8g027970 | 69.775 | 579 | 171 | 1 | 1 | 579 | 1 | 575 | 0.0 | 884 |
| MS.gene22809.t1 | MTR_7g117110 | 98.259 | 402 | 7 | 0 | 1 | 402 | 1 | 402 | 0.0 | 827 |
| MS.gene22809.t1 | MTR_0102s0060 | 48.537 | 581 | 285 | 6 | 11 | 579 | 19 | 597 | 0.0 | 582 |
| MS.gene22809.t1 | MTR_8g037720 | 73.832 | 321 | 62 | 1 | 259 | 579 | 137 | 435 | 3.66e-169 | 488 |
| MS.gene22809.t1 | MTR_8g037720 | 67.133 | 143 | 47 | 0 | 10 | 152 | 1 | 143 | 3.45e-57 | 198 |
| MS.gene22809.t1 | MTR_1g047730 | 79.389 | 262 | 43 | 1 | 318 | 579 | 112 | 362 | 8.56e-148 | 430 |
| MS.gene22809.t1 | MTR_1g047730 | 52.903 | 155 | 28 | 3 | 10 | 163 | 1 | 111 | 2.53e-35 | 136 |
| MS.gene22809.t1 | MTR_5g016320 | 39.931 | 581 | 338 | 6 | 5 | 578 | 15 | 591 | 7.95e-146 | 434 |
| MS.gene22809.t1 | MTR_0035s0150 | 39.367 | 569 | 327 | 8 | 12 | 575 | 21 | 576 | 1.73e-136 | 409 |
| MS.gene22809.t1 | MTR_4g045903 | 36.742 | 577 | 349 | 7 | 9 | 576 | 28 | 597 | 8.47e-131 | 395 |
| MS.gene22809.t1 | MTR_8g467000 | 35.919 | 593 | 358 | 9 | 1 | 575 | 1 | 589 | 3.06e-128 | 389 |
| MS.gene22809.t1 | MTR_2g081860 | 36.254 | 582 | 348 | 8 | 12 | 575 | 15 | 591 | 7.61e-125 | 380 |
| MS.gene22809.t1 | MTR_1g088765 | 36.972 | 568 | 333 | 10 | 7 | 554 | 7 | 569 | 1.29e-118 | 364 |
| MS.gene22809.t1 | MTR_7g094190 | 34.669 | 574 | 339 | 15 | 11 | 561 | 5 | 565 | 5.42e-95 | 302 |
| MS.gene22809.t1 | MTR_1g088765 | 38.372 | 430 | 241 | 9 | 142 | 554 | 3 | 425 | 5.23e-90 | 285 |
| MS.gene22809.t1 | MTR_7g094190 | 34.801 | 477 | 278 | 14 | 105 | 561 | 2 | 465 | 1.13e-74 | 246 |
| MS.gene22809.t1 | MTR_7g094330 | 33.010 | 309 | 168 | 8 | 105 | 408 | 2 | 276 | 3.07e-38 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22809.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 12 | 586 | 0.0 | 793 |
| MS.gene22809.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
| MS.gene22809.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
| MS.gene22809.t1 | AT2G46370 | 65.209 | 503 | 166 | 3 | 78 | 578 | 1 | 496 | 0.0 | 715 |
| MS.gene22809.t1 | AT4G03400 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
| MS.gene22809.t1 | AT4G03400 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
| MS.gene22809.t1 | AT4G37390 | 38.302 | 577 | 342 | 8 | 12 | 578 | 22 | 594 | 1.83e-137 | 412 |
| MS.gene22809.t1 | AT2G23170 | 38.087 | 575 | 339 | 7 | 12 | 578 | 21 | 586 | 1.48e-136 | 410 |
| MS.gene22809.t1 | AT2G14960 | 38.609 | 575 | 330 | 8 | 12 | 578 | 21 | 580 | 1.66e-134 | 404 |
| MS.gene22809.t1 | AT4G27260 | 38.169 | 579 | 335 | 8 | 12 | 575 | 26 | 596 | 2.53e-132 | 400 |
| MS.gene22809.t1 | AT1G23160 | 38.621 | 580 | 324 | 11 | 12 | 576 | 16 | 578 | 4.16e-132 | 398 |
| MS.gene22809.t1 | AT1G48660 | 37.282 | 574 | 336 | 9 | 14 | 575 | 7 | 568 | 1.34e-131 | 397 |
| MS.gene22809.t1 | AT1G48660 | 37.128 | 571 | 338 | 8 | 14 | 575 | 7 | 565 | 2.36e-131 | 396 |
| MS.gene22809.t1 | AT1G59500 | 38.342 | 579 | 333 | 10 | 12 | 578 | 22 | 588 | 4.23e-131 | 396 |
| MS.gene22809.t1 | AT5G54510 | 36.797 | 587 | 352 | 8 | 3 | 575 | 15 | 596 | 5.89e-129 | 391 |
| MS.gene22809.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.01e-126 | 383 |
| MS.gene22809.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.01e-126 | 383 |
| MS.gene22809.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 20 | 589 | 3.32e-126 | 383 |
| MS.gene22809.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.15e-122 | 372 |
| MS.gene22809.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.15e-122 | 372 |
| MS.gene22809.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 79 | 657 | 6.04e-121 | 372 |
| MS.gene22809.t1 | AT5G51470 | 36.907 | 569 | 337 | 8 | 11 | 569 | 9 | 565 | 2.64e-120 | 368 |
| MS.gene22809.t1 | AT5G13370 | 36.486 | 592 | 347 | 12 | 1 | 575 | 1 | 580 | 3.88e-120 | 368 |
| MS.gene22809.t1 | AT1G28130 | 36.410 | 585 | 341 | 11 | 17 | 575 | 17 | 596 | 8.74e-120 | 367 |
| MS.gene22809.t1 | AT5G13350 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.32e-118 | 361 |
| MS.gene22809.t1 | AT5G13350 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.32e-118 | 361 |
| MS.gene22809.t1 | AT5G13380 | 36.054 | 588 | 354 | 10 | 1 | 575 | 31 | 609 | 4.10e-117 | 361 |
| MS.gene22809.t1 | AT2G47750 | 37.113 | 582 | 348 | 11 | 5 | 575 | 3 | 577 | 1.16e-116 | 358 |
| MS.gene22809.t1 | AT1G48670 | 32.042 | 568 | 318 | 9 | 16 | 575 | 10 | 517 | 2.02e-97 | 306 |
| MS.gene22809.t1 | AT5G51470 | 36.383 | 481 | 286 | 6 | 98 | 569 | 6 | 475 | 2.57e-97 | 305 |
| MS.gene22809.t1 | AT1G28130 | 36.748 | 449 | 257 | 8 | 150 | 575 | 9 | 453 | 7.62e-91 | 288 |
| MS.gene22809.t1 | AT1G48670 | 36.165 | 412 | 245 | 5 | 172 | 575 | 5 | 406 | 5.30e-89 | 281 |
| MS.gene22809.t1 | AT1G48690 | 35.263 | 190 | 114 | 6 | 14 | 200 | 7 | 190 | 1.31e-21 | 93.2 |
Find 116 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAATGCAAAGTACATTTA+TGG | 0.084381 | 7.4:-1300612 | MS.gene22809:CDS |
| CTATTACCACTATGTCTTTA+AGG | 0.098138 | 7.4:-1301773 | MS.gene22809:intron |
| TCATTCCATGGTATATATTT+TGG | 0.122722 | 7.4:+1301627 | None:intergenic |
| ATTATTAGTAGAAGAGAAAT+TGG | 0.187935 | 7.4:-1298504 | MS.gene22809:CDS |
| GGAAACACTCAAAAGAATTT+TGG | 0.206331 | 7.4:-1301958 | MS.gene22809:CDS |
| GCTGAATATTTGCAGAATTT+TGG | 0.212038 | 7.4:-1301921 | MS.gene22809:CDS |
| AGGCTCTATGGAACCATATT+TGG | 0.233571 | 7.4:-1300580 | MS.gene22809:CDS |
| TGGATTATGTTAGCTAGTTC+TGG | 0.251144 | 7.4:+1300687 | None:intergenic |
| TATGCTGTGCTTCCTCAAAT+TGG | 0.269811 | 7.4:-1300444 | MS.gene22809:CDS |
| TACGTAGTTCCCTGGTTCTT+TGG | 0.271512 | 7.4:+1298448 | None:intergenic |
| TCAGAGCCTTTGAACAAGTT+TGG | 0.276112 | 7.4:-1300806 | MS.gene22809:CDS |
| TTTCAGGTTTATACAGGTAT+AGG | 0.281287 | 7.4:-1298670 | MS.gene22809:intron |
| CTTGATCATTACCTTGGATT+AGG | 0.281601 | 7.4:-1298260 | MS.gene22809:CDS |
| CCTTAGAACTTCGGGTTGTT+AGG | 0.281656 | 7.4:-1298304 | MS.gene22809:CDS |
| CTTAAAGACATAGTGGTAAT+AGG | 0.285904 | 7.4:+1301774 | None:intergenic |
| CAGGGAACTACGTAATCTTC+TGG | 0.286130 | 7.4:-1298439 | MS.gene22809:CDS |
| AGTCCAGATGAAGTGATATT+TGG | 0.291634 | 7.4:-1300936 | MS.gene22809:CDS |
| CCTAACAACCCGAAGTTCTA+AGG | 0.305448 | 7.4:+1298304 | None:intergenic |
| TGGCATTATGACAGGCTCTA+TGG | 0.317027 | 7.4:-1300592 | MS.gene22809:CDS |
| TCAAGAATTCTACAGATAAA+AGG | 0.326689 | 7.4:+1301828 | None:intergenic |
| CAGAGCCTTTGAACAAGTTT+GGG | 0.335203 | 7.4:-1300805 | MS.gene22809:CDS |
| ATGTTAGCTAGTTCTGGATT+TGG | 0.354156 | 7.4:+1300693 | None:intergenic |
| TTTATCTGTAGAATTCTTGA+TGG | 0.355516 | 7.4:-1301825 | MS.gene22809:CDS |
| ACTAAATTTCAGGTTTATAC+AGG | 0.363189 | 7.4:-1298676 | MS.gene22809:intron |
| TATTGGAGCCTTAGAACTTC+GGG | 0.374940 | 7.4:-1298312 | MS.gene22809:CDS |
| GGGGATGTGGTAAAAGTTAT+GGG | 0.377506 | 7.4:-1298644 | MS.gene22809:CDS |
| TCTCGTAAAGTCAACTCTAT+TGG | 0.387723 | 7.4:-1298329 | MS.gene22809:CDS |
| AAGGCTTTAAACTTCATATA+CGG | 0.393788 | 7.4:-1301071 | MS.gene22809:CDS |
| CTACGAATAAACTTTAGTTC+TGG | 0.395325 | 7.4:+1298605 | None:intergenic |
| AGCAAACAGTTCAAAACAAA+AGG | 0.397243 | 7.4:-1301047 | MS.gene22809:CDS |
| CCTTTGTGTACTGCTGACTA+TGG | 0.399568 | 7.4:-1300528 | MS.gene22809:CDS |
| CCATAAATGTACTTTGCATT+GGG | 0.403210 | 7.4:+1300612 | None:intergenic |
| GATGTATAGGATTAAGCAAC+TGG | 0.406579 | 7.4:-1300659 | MS.gene22809:CDS |
| ATAGATGACAATATAATGAT+TGG | 0.410685 | 7.4:+1300901 | None:intergenic |
| GCCATAAATGTACTTTGCAT+TGG | 0.412688 | 7.4:+1300611 | None:intergenic |
| TTCATTGCATGTTTGTAAGA+TGG | 0.414552 | 7.4:+1300981 | None:intergenic |
| ATAATCCACAAAAGATGTAT+AGG | 0.416203 | 7.4:-1300672 | MS.gene22809:CDS |
| ACAGCATAAGTTGCCAATTC+AGG | 0.421103 | 7.4:+1300459 | None:intergenic |
| TTTCCGCGAGGAAGTTCAAT+TGG | 0.426349 | 7.4:-1300865 | MS.gene22809:CDS |
| AAAATTCTTGATCATTACCT+TGG | 0.430567 | 7.4:-1298266 | MS.gene22809:CDS |
| AGGGGATGTGGTAAAAGTTA+TGG | 0.432684 | 7.4:-1298645 | MS.gene22809:CDS |
| CCGCCAAATATCACTTCATC+TGG | 0.432735 | 7.4:+1300933 | None:intergenic |
| AAACCACAATGCAGATATAT+CGG | 0.444589 | 7.4:-1301593 | MS.gene22809:CDS |
| TTAGTTCTGGAGTTGAGTTA+TGG | 0.454186 | 7.4:+1298618 | None:intergenic |
| ATTGTTATGACCACTCCAAC+AGG | 0.456262 | 7.4:-1300312 | MS.gene22809:intron |
| TACATTTATGGCATTATGAC+AGG | 0.460837 | 7.4:-1300600 | MS.gene22809:CDS |
| CTATTGGAGCCTTAGAACTT+CGG | 0.462174 | 7.4:-1298313 | MS.gene22809:CDS |
| CAGGTATAGGCTAGGGGATG+TGG | 0.467515 | 7.4:-1298657 | MS.gene22809:CDS |
| TGCAGTTCTGGCACTACGCA+AGG | 0.476283 | 7.4:-1301654 | MS.gene22809:intron |
| GAACTTCGGGTTGTTAGGAA+AGG | 0.487975 | 7.4:-1298299 | MS.gene22809:CDS |
| AACTCAAAGTAACCAATTTG+AGG | 0.491446 | 7.4:+1300432 | None:intergenic |
| ATCTTACAAACATGCAATGA+AGG | 0.492223 | 7.4:-1300979 | MS.gene22809:CDS |
| GCAAACAGTTCAAAACAAAA+GGG | 0.492256 | 7.4:-1301046 | MS.gene22809:CDS |
| GAGTGAATGCTGCAACTGTT+TGG | 0.498901 | 7.4:-1298384 | MS.gene22809:CDS |
| CCTTTGTGTTAATCCTCAGC+CGG | 0.501458 | 7.4:-1300373 | MS.gene22809:CDS |
| AATTACTAAAGATGCAGAAA+GGG | 0.503049 | 7.4:-1301988 | MS.gene22809:CDS |
| CAGAAGATTACGTAGTTCCC+TGG | 0.503210 | 7.4:+1298440 | None:intergenic |
| GTTTATACAGGTATAGGCTA+GGG | 0.505461 | 7.4:-1298664 | MS.gene22809:CDS |
| TCAGTGAGTCCCACCGGCTG+AGG | 0.514095 | 7.4:+1300360 | None:intergenic |
| TCAAACAATTCATCATTCCA+TGG | 0.514252 | 7.4:+1301615 | None:intergenic |
| CTCTTCCCAAACTTGTTCAA+AGG | 0.517970 | 7.4:+1300800 | None:intergenic |
| AGATGAAGACCTGTTCCTAT+AGG | 0.519223 | 7.4:+1301560 | None:intergenic |
| GACATAGCAGTTCGAATGGA+GGG | 0.520344 | 7.4:+1300729 | None:intergenic |
| AGGGAACTACGTAATCTTCT+GGG | 0.522975 | 7.4:-1298438 | MS.gene22809:CDS |
| CCTGTTCCTATAGGCAAAAG+AGG | 0.524965 | 7.4:+1301569 | None:intergenic |
| TAATCTTCTGGGAAATCAGT+GGG | 0.525589 | 7.4:-1298427 | MS.gene22809:CDS |
| GGTTTATACAGGTATAGGCT+AGG | 0.526104 | 7.4:-1298665 | MS.gene22809:CDS |
| TAATTACTAAAGATGCAGAA+AGG | 0.529649 | 7.4:-1301989 | MS.gene22809:CDS |
| TTGTGTTAATCCTCAGCCGG+TGG | 0.532157 | 7.4:-1300370 | MS.gene22809:CDS |
| CCAGATGAAGTGATATTTGG+CGG | 0.533852 | 7.4:-1300933 | MS.gene22809:CDS |
| GATGCTTCTCCCATTCTCAC+TGG | 0.537832 | 7.4:-1301801 | MS.gene22809:CDS |
| GCTGACTATGGAGCTTCTGA+AGG | 0.543026 | 7.4:-1300516 | MS.gene22809:CDS |
| GTAAAACTGAGGCACTATGC+AGG | 0.551972 | 7.4:-1300558 | MS.gene22809:CDS |
| TCATTCTCAAGCTGCGTGAG+AGG | 0.557653 | 7.4:+1300405 | None:intergenic |
| GGACTCACTGAGGTTAAAGT+TGG | 0.561408 | 7.4:-1300348 | MS.gene22809:CDS |
| TTTAGACATAGCAGTTCGAA+TGG | 0.562118 | 7.4:+1300725 | None:intergenic |
| GAAAGATTTACAGTTAGCCG+TGG | 0.563252 | 7.4:-1298540 | MS.gene22809:CDS |
| AAGTCTTTGTGAGTAGCTAG+TGG | 0.565261 | 7.4:+1301855 | None:intergenic |
| CTTTGTAATGATATAAGAGA+AGG | 0.565767 | 7.4:-1300777 | MS.gene22809:CDS |
| ACTAGCTACTCACAAAGACT+TGG | 0.569122 | 7.4:-1301853 | MS.gene22809:CDS |
| GTTGATTTATCCAAAGAACC+AGG | 0.570837 | 7.4:-1298458 | MS.gene22809:CDS |
| ACAACACCTTAAAGACATAG+TGG | 0.579090 | 7.4:+1301767 | None:intergenic |
| AGATGCAGAAAGGGTTCAGA+GGG | 0.579727 | 7.4:-1301979 | MS.gene22809:CDS |
| TGTGTAGGACCTACACATCT+TGG | 0.580216 | 7.4:+1298212 | None:intergenic |
| TAACAGCTGTTCCTAATCCA+AGG | 0.581897 | 7.4:+1298249 | None:intergenic |
| GGAAGCCAAAATATATACCA+TGG | 0.582732 | 7.4:-1301632 | MS.gene22809:CDS |
| TGTGTTAATCCTCAGCCGGT+GGG | 0.586045 | 7.4:-1300369 | MS.gene22809:CDS |
| TATAAAACACCAAGATGTGT+AGG | 0.586504 | 7.4:-1298221 | MS.gene22809:CDS |
| ACTATGGAGCTTCTGAAGGG+TGG | 0.586810 | 7.4:-1300512 | MS.gene22809:CDS |
| ATAGGATTAAGCAACTGGTA+TGG | 0.589066 | 7.4:-1300654 | MS.gene22809:CDS |
| CAGAACTAAAGTTTATTCGT+AGG | 0.592685 | 7.4:-1298604 | MS.gene22809:CDS |
| TTATATTGTCATCTATTATG+CGG | 0.600773 | 7.4:-1300894 | MS.gene22809:CDS |
| ACAGTTAGCCGTGGAAGCAG+CGG | 0.606164 | 7.4:-1298531 | MS.gene22809:CDS |
| TTAACCTCAGTGAGTCCCAC+CGG | 0.608632 | 7.4:+1300354 | None:intergenic |
| AGACATAGCAGTTCGAATGG+AGG | 0.608831 | 7.4:+1300728 | None:intergenic |
| AGCAGTTCGAATGGAGGGAA+CGG | 0.609463 | 7.4:+1300734 | None:intergenic |
| GCATAAGTTGCCAATTCAGG+TGG | 0.614033 | 7.4:+1300462 | None:intergenic |
| TGAGTACTTACCTGTTGGAG+TGG | 0.617705 | 7.4:+1300302 | None:intergenic |
| GCAGTTCTGGCACTACGCAA+GGG | 0.622048 | 7.4:-1301653 | MS.gene22809:intron |
| GTAATCTTCTGGGAAATCAG+TGG | 0.631300 | 7.4:-1298428 | MS.gene22809:CDS |
| AAGATGCAGAAAGGGTTCAG+AGG | 0.633150 | 7.4:-1301980 | MS.gene22809:CDS |
| CTGACTATGGAGCTTCTGAA+GGG | 0.645246 | 7.4:-1300515 | MS.gene22809:CDS |
| CCATAGTCAGCAGTACACAA+AGG | 0.646601 | 7.4:+1300528 | None:intergenic |
| GGTCCGATATATCTGCATTG+TGG | 0.647561 | 7.4:+1301590 | None:intergenic |
| TTTATACAGGTATAGGCTAG+GGG | 0.649562 | 7.4:-1298663 | MS.gene22809:CDS |
| CAAACAGTTCAAAACAAAAG+GGG | 0.653886 | 7.4:-1301045 | MS.gene22809:CDS |
| TTGATTTATCCAAAGAACCA+GGG | 0.653926 | 7.4:-1298457 | MS.gene22809:CDS |
| GAAAGTGAAAGAGTTTAACA+TGG | 0.667358 | 7.4:-1302036 | MS.gene22809:CDS |
| CCGGCTGAGGATTAACACAA+AGG | 0.670791 | 7.4:+1300373 | None:intergenic |
| AACCATATTTGGTAAAACTG+AGG | 0.675088 | 7.4:-1300569 | MS.gene22809:CDS |
| AAACAGTTCAAAACAAAAGG+GGG | 0.677242 | 7.4:-1301044 | MS.gene22809:CDS |
| GTTCTTTGGATAAATCAACA+TGG | 0.683092 | 7.4:+1298462 | None:intergenic |
| TGCAACACAATGTTGTGTGT+AGG | 0.700702 | 7.4:+1298197 | None:intergenic |
| TCAGCCGGTGGGACTCACTG+AGG | 0.714814 | 7.4:-1300358 | MS.gene22809:CDS |
| AATCTTCTGGGAAATCAGTG+GGG | 0.735072 | 7.4:-1298426 | MS.gene22809:CDS |
| ATACCAATTGAACTTCCTCG+CGG | 0.744188 | 7.4:+1300862 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAGAAGAAAAAAACAT+AGG | + | chr7.4:1299003-1299022 | None:intergenic | 15.0% |
| !! | AATAAAGTAATAGATATTCT+TGG | - | chr7.4:1301327-1301346 | MS.gene22809:intron | 15.0% |
| !! | TAAAGAAAAACATCATAATA+AGG | - | chr7.4:1300060-1300079 | MS.gene22809:intron | 15.0% |
| !! | TATTCTATAGATACTATTTA+TGG | + | chr7.4:1298977-1298996 | None:intergenic | 15.0% |
| !! | TGAATAAAGAACAATAAAAA+TGG | + | chr7.4:1298721-1298740 | None:intergenic | 15.0% |
| !! | TTCTTAATGAATATTTGAAT+TGG | + | chr7.4:1301452-1301471 | None:intergenic | 15.0% |
| !!! | AATTTTTCTTCTGTATATTT+CGG | - | chr7.4:1300581-1300600 | MS.gene22809:CDS | 15.0% |
| !!! | TGCTATATTTTAATCTTATT+AGG | + | chr7.4:1301055-1301074 | None:intergenic | 15.0% |
| !!! | TTTATTGATTGAAATTCATA+GGG | - | chr7.4:1300131-1300150 | MS.gene22809:intron | 15.0% |
| !!! | TTTTATTGATTGAAATTCAT+AGG | - | chr7.4:1300130-1300149 | MS.gene22809:intron | 15.0% |
| !! | AAAATGAAAAAAGTAACCTA+AGG | + | chr7.4:1300631-1300650 | None:intergenic | 20.0% |
| !! | AACAATAAAAATGGTATACA+AGG | + | chr7.4:1298712-1298731 | None:intergenic | 20.0% |
| !! | ATAGATGACAATATAATGAT+TGG | + | chr7.4:1299291-1299310 | None:intergenic | 20.0% |
| !! | ATGAATAAACTTGTCTAATT+TGG | + | chr7.4:1301000-1301019 | None:intergenic | 20.0% |
| !! | ATTATTAGTAGAAGAGAAAT+TGG | - | chr7.4:1301685-1301704 | MS.gene22809:intron | 20.0% |
| !! | GAAAATATTTATAATGCTTC+TGG | - | chr7.4:1300906-1300925 | MS.gene22809:CDS | 20.0% |
| !! | GAATATAAATTAAATGCTCT+TGG | - | chr7.4:1300603-1300622 | MS.gene22809:CDS | 20.0% |
| !! | TGTTAAAATCGTAATTGAAA+GGG | + | chr7.4:1300882-1300901 | None:intergenic | 20.0% |
| !! | TGTTACATCATTTAACATTA+GGG | + | chr7.4:1300743-1300762 | None:intergenic | 20.0% |
| !! | TTATATTGTCATCTATTATG+CGG | - | chr7.4:1299295-1299314 | MS.gene22809:intron | 20.0% |
| !! | TTGTTAAAATCGTAATTGAA+AGG | + | chr7.4:1300883-1300902 | None:intergenic | 20.0% |
| !! | TTGTTACATCATTTAACATT+AGG | + | chr7.4:1300744-1300763 | None:intergenic | 20.0% |
| !! | TTTAAATCTGTAATGATGTA+TGG | - | chr7.4:1300852-1300871 | MS.gene22809:CDS | 20.0% |
| !!! | CTTTATTTCTGATATTTGTT+GGG | - | chr7.4:1298667-1298686 | MS.gene22809:CDS | 20.0% |
| !!! | TATTTAAACTGCTTTAAATC+TGG | + | chr7.4:1300816-1300835 | None:intergenic | 20.0% |
| !!! | TCTTTATTTCTGATATTTGT+TGG | - | chr7.4:1298666-1298685 | MS.gene22809:CDS | 20.0% |
| !!! | TTATTGATTGAAATTCATAG+GGG | - | chr7.4:1300132-1300151 | MS.gene22809:intron | 20.0% |
| ! | AAAATTCTTGATCATTACCT+TGG | - | chr7.4:1301923-1301942 | MS.gene22809:CDS | 25.0% |
| ! | AATGAAGAAAAAAGTAGTTG+TGG | + | chr7.4:1299997-1300016 | None:intergenic | 25.0% |
| ! | AATTACTAAAGATGCAGAAA+GGG | - | chr7.4:1298201-1298220 | MS.gene22809:CDS | 25.0% |
| ! | AGAGAGTTTCCTATAAAAAA+TGG | - | chr7.4:1299094-1299113 | MS.gene22809:intron | 25.0% |
| ! | ATAATCCACAAAAGATGTAT+AGG | - | chr7.4:1299517-1299536 | MS.gene22809:intron | 25.0% |
| ! | CCAAACAAAAGTAAATTAAC+CGG | + | chr7.4:1299921-1299940 | None:intergenic | 25.0% |
| ! | CTTTGTAATGATATAAGAGA+AGG | - | chr7.4:1299412-1299431 | MS.gene22809:intron | 25.0% |
| ! | GAGAGTTTCCTATAAAAAAT+GGG | - | chr7.4:1299095-1299114 | MS.gene22809:intron | 25.0% |
| ! | GTTACATCATTTAACATTAG+GGG | + | chr7.4:1300742-1300761 | None:intergenic | 25.0% |
| ! | TAATTACTAAAGATGCAGAA+AGG | - | chr7.4:1298200-1298219 | MS.gene22809:CDS | 25.0% |
| ! | TATATTGTGCACATTCAATA+CGG | + | chr7.4:1301410-1301429 | None:intergenic | 25.0% |
| ! | TCAAGAATTCTACAGATAAA+AGG | + | chr7.4:1298364-1298383 | None:intergenic | 25.0% |
| ! | TGTTAAATGATGTAACAAAG+TGG | - | chr7.4:1300746-1300765 | MS.gene22809:CDS | 25.0% |
| ! | TTTATCTGTAGAATTCTTGA+TGG | - | chr7.4:1298364-1298383 | MS.gene22809:CDS | 25.0% |
| !! | ATGTATTTTATTATGCTTGG+TGG | - | chr7.4:1300957-1300976 | MS.gene22809:CDS | 25.0% |
| !! | CATCATTACAGATTTAAAAC+TGG | + | chr7.4:1300850-1300869 | None:intergenic | 25.0% |
| !! | CATTTCTCTTTCATTTTGAA+CGG | - | chr7.4:1300381-1300400 | MS.gene22809:CDS | 25.0% |
| !! | TCATTCCATGGTATATATTT+TGG | + | chr7.4:1298565-1298584 | None:intergenic | 25.0% |
| !! | TGGATGTATTTTATTATGCT+TGG | - | chr7.4:1300954-1300973 | MS.gene22809:CDS | 25.0% |
| !! | TTAATCCTATACATCTTTTG+TGG | + | chr7.4:1299525-1299544 | None:intergenic | 25.0% |
| !! | TTATTTAATCGAGCTTTTCT+TGG | - | chr7.4:1301122-1301141 | MS.gene22809:intron | 25.0% |
| !! | TTCAACATACTCTCTTTTAT+TGG | + | chr7.4:1300209-1300228 | None:intergenic | 25.0% |
| !! | TTTTCCGTTGTTTATACAAT+CGG | + | chr7.4:1298796-1298815 | None:intergenic | 25.0% |
| !!! | AAGGCTTTAAACTTCATATA+CGG | - | chr7.4:1299118-1299137 | MS.gene22809:intron | 25.0% |
| !!! | ACTAAATTTCAGGTTTATAC+AGG | - | chr7.4:1301513-1301532 | MS.gene22809:intron | 25.0% |
| AAACAGTTCAAAACAAAAGG+GGG | - | chr7.4:1299145-1299164 | MS.gene22809:intron | 30.0% | |
| AAACCACAATGCAGATATAT+CGG | - | chr7.4:1298596-1298615 | MS.gene22809:CDS | 30.0% | |
| AACCATATTTGGTAAAACTG+AGG | - | chr7.4:1299620-1299639 | MS.gene22809:intron | 30.0% | |
| AACCTGAAATTTAGTCACAA+AGG | + | chr7.4:1301508-1301527 | None:intergenic | 30.0% | |
| AACTCAAAGTAACCAATTTG+AGG | + | chr7.4:1299760-1299779 | None:intergenic | 30.0% | |
| ACCATAAAACATTTCACAAC+TGG | - | chr7.4:1300558-1300577 | MS.gene22809:CDS | 30.0% | |
| AGCAAACAGTTCAAAACAAA+AGG | - | chr7.4:1299142-1299161 | MS.gene22809:intron | 30.0% | |
| AGCGAAAATTTATGAGTTCA+AGG | + | chr7.4:1298498-1298517 | None:intergenic | 30.0% | |
| ATAAACAACGGAAAATGATG+CGG | - | chr7.4:1298801-1298820 | MS.gene22809:intron | 30.0% | |
| ATAATTGAGTACTTACCTGT+TGG | + | chr7.4:1299895-1299914 | None:intergenic | 30.0% | |
| ATAGATCACATCAAATCATG+TGG | + | chr7.4:1300180-1300199 | None:intergenic | 30.0% | |
| ATCTTACAAACATGCAATGA+AGG | - | chr7.4:1299210-1299229 | MS.gene22809:intron | 30.0% | |
| ATGTGGGTCACATATATATT+TGG | + | chr7.4:1300163-1300182 | None:intergenic | 30.0% | |
| CAAACAGTTCAAAACAAAAG+GGG | - | chr7.4:1299144-1299163 | MS.gene22809:intron | 30.0% | |
| CAACTGTCAAATGTTATAGT+TGG | - | chr7.4:1298945-1298964 | MS.gene22809:intron | 30.0% | |
| CAGAACTAAAGTTTATTCGT+AGG | - | chr7.4:1301585-1301604 | MS.gene22809:CDS | 30.0% | |
| CCATAAATGTACTTTGCATT+GGG | + | chr7.4:1299580-1299599 | None:intergenic | 30.0% | |
| CTATTACCACTATGTCTTTA+AGG | - | chr7.4:1298416-1298435 | MS.gene22809:CDS | 30.0% | |
| CTTAAAGACATAGTGGTAAT+AGG | + | chr7.4:1298418-1298437 | None:intergenic | 30.0% | |
| GAAAGTGAAAGAGTTTAACA+TGG | - | chr7.4:1298153-1298172 | MS.gene22809:CDS | 30.0% | |
| GCAAACAGTTCAAAACAAAA+GGG | - | chr7.4:1299143-1299162 | MS.gene22809:intron | 30.0% | |
| GTAAGTACTCAATTATTGTC+CGG | - | chr7.4:1299899-1299918 | MS.gene22809:intron | 30.0% | |
| GTTCTTTGGATAAATCAACA+TGG | + | chr7.4:1301730-1301749 | None:intergenic | 30.0% | |
| GTTTCCTATAAAAAATGGGA+AGG | - | chr7.4:1299099-1299118 | MS.gene22809:intron | 30.0% | |
| TACATTTATGGCATTATGAC+AGG | - | chr7.4:1299589-1299608 | MS.gene22809:intron | 30.0% | |
| TAGATCACATCAAATCATGT+GGG | + | chr7.4:1300179-1300198 | None:intergenic | 30.0% | |
| TATAAAACACCAAGATGTGT+AGG | - | chr7.4:1301968-1301987 | MS.gene22809:CDS | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | + | chr7.4:1298577-1298596 | None:intergenic | 30.0% | |
| TCAAGGACTAATTAGATGAA+GGG | + | chr7.4:1298481-1298500 | None:intergenic | 30.0% | |
| TTCAAGGACTAATTAGATGA+AGG | + | chr7.4:1298482-1298501 | None:intergenic | 30.0% | |
| TTCATTGCATGTTTGTAAGA+TGG | + | chr7.4:1299211-1299230 | None:intergenic | 30.0% | |
| TTGATTTATCCAAAGAACCA+GGG | - | chr7.4:1301732-1301751 | MS.gene22809:intron | 30.0% | |
| TTTAACATTAGGGGTCAAAA+AGG | + | chr7.4:1300733-1300752 | None:intergenic | 30.0% | |
| ! | CTACGAATAAACTTTAGTTC+TGG | + | chr7.4:1301587-1301606 | None:intergenic | 30.0% |
| ! | GCTGAATATTTGCAGAATTT+TGG | - | chr7.4:1298268-1298287 | MS.gene22809:CDS | 30.0% |
| ! | GGAAACACTCAAAAGAATTT+TGG | - | chr7.4:1298231-1298250 | MS.gene22809:CDS | 30.0% |
| ! | TCCAGTTGTGAAATGTTTTA+TGG | + | chr7.4:1300562-1300581 | None:intergenic | 30.0% |
| !! | CCGGTTAATTTACTTTTGTT+TGG | - | chr7.4:1299918-1299937 | MS.gene22809:intron | 30.0% |
| !! | TATAAAAGTGCCATGAATCA+TGG | + | chr7.4:1301203-1301222 | None:intergenic | 30.0% |
| !! | TTTCAGGTTTATACAGGTAT+AGG | - | chr7.4:1301519-1301538 | MS.gene22809:intron | 30.0% |
| !!! | AAAGCCTTCCCATTTTTTAT+AGG | + | chr7.4:1299106-1299125 | None:intergenic | 30.0% |
| !!! | TGCTATGTCATTTTCAACTT+TGG | - | chr7.4:1301175-1301194 | MS.gene22809:intron | 30.0% |
| AAAAAAGTAGTTGTGGTCCT+TGG | + | chr7.4:1299990-1300009 | None:intergenic | 35.0% | |
| AAGTGGCAAAACAATGTTTG+TGG | + | chr7.4:1300503-1300522 | None:intergenic | 35.0% | |
| ACAACACCTTAAAGACATAG+TGG | + | chr7.4:1298425-1298444 | None:intergenic | 35.0% | |
| AGTCCAGATGAAGTGATATT+TGG | - | chr7.4:1299253-1299272 | MS.gene22809:intron | 35.0% | |
| ATAGGATTAAGCAACTGGTA+TGG | - | chr7.4:1299535-1299554 | MS.gene22809:intron | 35.0% | |
| ATCGGCTACTAAACTATGAT+TGG | + | chr7.4:1298778-1298797 | None:intergenic | 35.0% | |
| ATCTACCTACTCATAGTAAG+TGG | + | chr7.4:1300520-1300539 | None:intergenic | 35.0% | |
| ATGAAACTATGATGTGTCCT+TGG | + | chr7.4:1301281-1301300 | None:intergenic | 35.0% | |
| CAAGGACTAATTAGATGAAG+GGG | + | chr7.4:1298480-1298499 | None:intergenic | 35.0% | |
| CACCTTTGTGACTAAATTTC+AGG | - | chr7.4:1301503-1301522 | MS.gene22809:intron | 35.0% | |
| CCCAATGCAAAGTACATTTA+TGG | - | chr7.4:1299577-1299596 | MS.gene22809:intron | 35.0% | |
| CTTGATCATTACCTTGGATT+AGG | - | chr7.4:1301929-1301948 | MS.gene22809:CDS | 35.0% | |
| GAGATGCTTGAAGTTTAAGT+AGG | - | chr7.4:1300693-1300712 | MS.gene22809:CDS | 35.0% | |
| GATGTATAGGATTAAGCAAC+TGG | - | chr7.4:1299530-1299549 | MS.gene22809:intron | 35.0% | |
| GATTTACACGTAAGAGAGTA+GGG | + | chr7.4:1300419-1300438 | None:intergenic | 35.0% | |
| GCAAAACAATGTTTGTGGTT+TGG | + | chr7.4:1300498-1300517 | None:intergenic | 35.0% | |
| GCCATAAATGTACTTTGCAT+TGG | + | chr7.4:1299581-1299600 | None:intergenic | 35.0% | |
| GGAAGCCAAAATATATACCA+TGG | - | chr7.4:1298557-1298576 | MS.gene22809:CDS | 35.0% | |
| GTACTAGTGTATTACTACCA+AGG | - | chr7.4:1299970-1299989 | MS.gene22809:intron | 35.0% | |
| GTAGATTGTTAGTGCAAGTT+TGG | - | chr7.4:1300534-1300553 | MS.gene22809:CDS | 35.0% | |
| GTAGCCGATTGTATAAACAA+CGG | - | chr7.4:1298789-1298808 | MS.gene22809:intron | 35.0% | |
| GTTTATACAGGTATAGGCTA+GGG | - | chr7.4:1301525-1301544 | MS.gene22809:intron | 35.0% | |
| TCTCGTAAAGTCAACTCTAT+TGG | - | chr7.4:1301860-1301879 | MS.gene22809:CDS | 35.0% | |
| TGAAAATGACATAGCAGATG+AGG | + | chr7.4:1301171-1301190 | None:intergenic | 35.0% | |
| TGATTTACACGTAAGAGAGT+AGG | + | chr7.4:1300420-1300439 | None:intergenic | 35.0% | |
| TGGATTATGTTAGCTAGTTC+TGG | + | chr7.4:1299505-1299524 | None:intergenic | 35.0% | |
| TGTTGATATAACCTATGCCA+AGG | - | chr7.4:1301261-1301280 | MS.gene22809:intron | 35.0% | |
| TTTAGACATAGCAGTTCGAA+TGG | + | chr7.4:1299467-1299486 | None:intergenic | 35.0% | |
| TTTATACAGGTATAGGCTAG+GGG | - | chr7.4:1301526-1301545 | MS.gene22809:intron | 35.0% | |
| ! | AACTTTGGTTCCATGATTCA+TGG | - | chr7.4:1301190-1301209 | MS.gene22809:intron | 35.0% |
| ! | AATAGGTTTTCCAGTGAGAA+TGG | + | chr7.4:1298401-1298420 | None:intergenic | 35.0% |
| ! | ACTTGTGTTAAAGAGTGTGT+TGG | + | chr7.4:1300089-1300108 | None:intergenic | 35.0% |
| ! | ATAGGTTTTCCAGTGAGAAT+GGG | + | chr7.4:1298400-1298419 | None:intergenic | 35.0% |
| ! | CCAATTCAGGTGGAATTTTT+GGG | + | chr7.4:1299720-1299739 | None:intergenic | 35.0% |
| ! | CCTTTTTGCTAATTGGAGTT+GGG | - | chr7.4:1299048-1299067 | MS.gene22809:intron | 35.0% |
| ! | GATTTTCAGCAAAGTCTCAT+TGG | - | chr7.4:1301365-1301384 | MS.gene22809:intron | 35.0% |
| ! | GCTTTTCTTGGAGTTGAAAT+TGG | - | chr7.4:1301134-1301153 | MS.gene22809:intron | 35.0% |
| ! | GTTGATTTATCCAAAGAACC+AGG | - | chr7.4:1301731-1301750 | MS.gene22809:intron | 35.0% |
| ! | TAATCTTCTGGGAAATCAGT+GGG | - | chr7.4:1301762-1301781 | MS.gene22809:intron | 35.0% |
| ! | TACCATGCCTTTTTGCTAAT+TGG | - | chr7.4:1299041-1299060 | MS.gene22809:intron | 35.0% |
| ! | TGCCTCAGTTTTACCAAATA+TGG | + | chr7.4:1299625-1299644 | None:intergenic | 35.0% |
| !! | ATGTTAGCTAGTTCTGGATT+TGG | + | chr7.4:1299499-1299518 | None:intergenic | 35.0% |
| !! | TTAGTTCTGGAGTTGAGTTA+TGG | + | chr7.4:1301574-1301593 | None:intergenic | 35.0% |
| !! | TTTTGCCACTTACTATGAGT+AGG | - | chr7.4:1300512-1300531 | MS.gene22809:CDS | 35.0% |
| !!! | TTGCAGAATTTTGGTCTTGA+TGG | - | chr7.4:1298277-1298296 | MS.gene22809:CDS | 35.0% |
| AAGTCTTTGTGAGTAGCTAG+TGG | + | chr7.4:1298337-1298356 | None:intergenic | 40.0% | |
| ACAGCATAAGTTGCCAATTC+AGG | + | chr7.4:1299733-1299752 | None:intergenic | 40.0% | |
| ACTAGCTACTCACAAAGACT+TGG | - | chr7.4:1298336-1298355 | MS.gene22809:CDS | 40.0% | |
| AGATGAAGACCTGTTCCTAT+AGG | + | chr7.4:1298632-1298651 | None:intergenic | 40.0% | |
| AGGCTCTATGGAACCATATT+TGG | - | chr7.4:1299609-1299628 | MS.gene22809:intron | 40.0% | |
| AGGGAACTACGTAATCTTCT+GGG | - | chr7.4:1301751-1301770 | MS.gene22809:intron | 40.0% | |
| AGGGGATGTGGTAAAAGTTA+TGG | - | chr7.4:1301544-1301563 | MS.gene22809:intron | 40.0% | |
| ATACCAATTGAACTTCCTCG+CGG | + | chr7.4:1299330-1299349 | None:intergenic | 40.0% | |
| ATAGGAAACTCTCTGCAGAA+AGG | + | chr7.4:1299088-1299107 | None:intergenic | 40.0% | |
| ATTGTTATGACCACTCCAAC+AGG | - | chr7.4:1299877-1299896 | MS.gene22809:intron | 40.0% | |
| CAGAGCCTTTGAACAAGTTT+GGG | - | chr7.4:1299384-1299403 | MS.gene22809:intron | 40.0% | |
| CCAGATGAAGTGATATTTGG+CGG | - | chr7.4:1299256-1299275 | MS.gene22809:intron | 40.0% | |
| CCCAAAAATTCCACCTGAAT+TGG | - | chr7.4:1299717-1299736 | MS.gene22809:intron | 40.0% | |
| CCCAACTCCAATTAGCAAAA+AGG | + | chr7.4:1299051-1299070 | None:intergenic | 40.0% | |
| CTATTGGAGCCTTAGAACTT+CGG | - | chr7.4:1301876-1301895 | MS.gene22809:CDS | 40.0% | |
| CTCCAATTAGCAAAAAGGCA+TGG | + | chr7.4:1299046-1299065 | None:intergenic | 40.0% | |
| GAAAGATTTACAGTTAGCCG+TGG | - | chr7.4:1301649-1301668 | MS.gene22809:CDS | 40.0% | |
| GGCGCATAGTATAAAACTGT+GGG | - | chr7.4:1300287-1300306 | MS.gene22809:intron | 40.0% | |
| GGGGATGTGGTAAAAGTTAT+GGG | - | chr7.4:1301545-1301564 | MS.gene22809:intron | 40.0% | |
| GGTTTATACAGGTATAGGCT+AGG | - | chr7.4:1301524-1301543 | MS.gene22809:intron | 40.0% | |
| GTCTAATTTGGTCCCAAAGA+TGG | + | chr7.4:1300988-1301007 | None:intergenic | 40.0% | |
| TAACAGCTGTTCCTAATCCA+AGG | + | chr7.4:1301943-1301962 | None:intergenic | 40.0% | |
| TATGACACGTGCTTACTTTG+TGG | - | chr7.4:1300934-1300953 | MS.gene22809:CDS | 40.0% | |
| TATGCTGTGCTTCCTCAAAT+TGG | - | chr7.4:1299745-1299764 | MS.gene22809:intron | 40.0% | |
| TATTGGAGCCTTAGAACTTC+GGG | - | chr7.4:1301877-1301896 | MS.gene22809:CDS | 40.0% | |
| TCAGAGCCTTTGAACAAGTT+TGG | - | chr7.4:1299383-1299402 | MS.gene22809:intron | 40.0% | |
| TGCAACACAATGTTGTGTGT+AGG | + | chr7.4:1301995-1302014 | None:intergenic | 40.0% | |
| TGGCGCATAGTATAAAACTG+TGG | - | chr7.4:1300286-1300305 | MS.gene22809:intron | 40.0% | |
| TGTTCATCAGTCATGCTATG+TGG | + | chr7.4:1298891-1298910 | None:intergenic | 40.0% | |
| TTAAATGCTCTTGGCACCTT+AGG | - | chr7.4:1300612-1300631 | MS.gene22809:CDS | 40.0% | |
| TTTGCATTGGGAAAAAGCTC+TGG | + | chr7.4:1299568-1299587 | None:intergenic | 40.0% | |
| ! | AATCTTCTGGGAAATCAGTG+GGG | - | chr7.4:1301763-1301782 | MS.gene22809:intron | 40.0% |
| ! | CTCTTCCCAAACTTGTTCAA+AGG | + | chr7.4:1299392-1299411 | None:intergenic | 40.0% |
| ! | GCCAATTCAGGTGGAATTTT+TGG | + | chr7.4:1299721-1299740 | None:intergenic | 40.0% |
| ! | GCCTTTTTGCTAATTGGAGT+TGG | - | chr7.4:1299047-1299066 | MS.gene22809:intron | 40.0% |
| ! | GTAATCTTCTGGGAAATCAG+TGG | - | chr7.4:1301761-1301780 | MS.gene22809:intron | 40.0% |
| ! | TACGAATGTTACTTGCACTG+TGG | - | chr7.4:1300266-1300285 | MS.gene22809:intron | 40.0% |
| ! | TGTGTTAAAGAGTGTGTTGG+TGG | + | chr7.4:1300086-1300105 | None:intergenic | 40.0% |
| ! | TTGGTGGTTTGACCATCTTT+GGG | - | chr7.4:1300973-1300992 | MS.gene22809:CDS | 40.0% |
| !! | TCTCTTAACTGTGCTACTTC+AGG | + | chr7.4:1300773-1300792 | None:intergenic | 40.0% |
| AAGATGCAGAAAGGGTTCAG+AGG | - | chr7.4:1298209-1298228 | MS.gene22809:CDS | 45.0% | |
| AGACATAGCAGTTCGAATGG+AGG | + | chr7.4:1299464-1299483 | None:intergenic | 45.0% | |
| AGATGCAGAAAGGGTTCAGA+GGG | - | chr7.4:1298210-1298229 | MS.gene22809:CDS | 45.0% | |
| CAGAAGATTACGTAGTTCCC+TGG | + | chr7.4:1301752-1301771 | None:intergenic | 45.0% | |
| CAGGGAACTACGTAATCTTC+TGG | - | chr7.4:1301750-1301769 | MS.gene22809:intron | 45.0% | |
| CCATAGTCAGCAGTACACAA+AGG | + | chr7.4:1299664-1299683 | None:intergenic | 45.0% | |
| CCGCCAAATATCACTTCATC+TGG | + | chr7.4:1299259-1299278 | None:intergenic | 45.0% | |
| CCTAACAACCCGAAGTTCTA+AGG | + | chr7.4:1301888-1301907 | None:intergenic | 45.0% | |
| CCTGTTCCTATAGGCAAAAG+AGG | + | chr7.4:1298623-1298642 | None:intergenic | 45.0% | |
| CCTTTGTGTTAATCCTCAGC+CGG | - | chr7.4:1299816-1299835 | MS.gene22809:intron | 45.0% | |
| CTATGATGTGTCCTTGGCAT+AGG | + | chr7.4:1301275-1301294 | None:intergenic | 45.0% | |
| CTGACTATGGAGCTTCTGAA+GGG | - | chr7.4:1299674-1299693 | MS.gene22809:intron | 45.0% | |
| GACATAGCAGTTCGAATGGA+GGG | + | chr7.4:1299463-1299482 | None:intergenic | 45.0% | |
| GAGTGAATGCTGCAACTGTT+TGG | - | chr7.4:1301805-1301824 | MS.gene22809:CDS | 45.0% | |
| GCATAAGTTGCCAATTCAGG+TGG | + | chr7.4:1299730-1299749 | None:intergenic | 45.0% | |
| GGACTCACTGAGGTTAAAGT+TGG | - | chr7.4:1299841-1299860 | MS.gene22809:intron | 45.0% | |
| GGTCCGATATATCTGCATTG+TGG | + | chr7.4:1298602-1298621 | None:intergenic | 45.0% | |
| TCATACTGCGAATGTGATGC+TGG | - | chr7.4:1300016-1300035 | MS.gene22809:intron | 45.0% | |
| TGACATAGCAGATGAGGTCA+AGG | + | chr7.4:1301165-1301184 | None:intergenic | 45.0% | |
| TGAGTACTTACCTGTTGGAG+TGG | + | chr7.4:1299890-1299909 | None:intergenic | 45.0% | |
| TGGCATTATGACAGGCTCTA+TGG | - | chr7.4:1299597-1299616 | MS.gene22809:intron | 45.0% | |
| TGTGTAGGACCTACACATCT+TGG | + | chr7.4:1301980-1301999 | None:intergenic | 45.0% | |
| TTTCCGCGAGGAAGTTCAAT+TGG | - | chr7.4:1299324-1299343 | MS.gene22809:intron | 45.0% | |
| ! | ATCGGACCTCTTTTGCCTAT+AGG | - | chr7.4:1298614-1298633 | MS.gene22809:CDS | 45.0% |
| ! | CCTCTTTTGCCTATAGGAAC+AGG | - | chr7.4:1298620-1298639 | MS.gene22809:CDS | 45.0% |
| ! | CCTTTGTGTACTGCTGACTA+TGG | - | chr7.4:1299661-1299680 | MS.gene22809:intron | 45.0% |
| ! | CTTGGTGGTTTGACCATCTT+TGG | - | chr7.4:1300972-1300991 | MS.gene22809:CDS | 45.0% |
| ! | GACAAGTCTTTTGTCGATGC+AGG | - | chr7.4:1301827-1301846 | MS.gene22809:CDS | 45.0% |
| ! | GTAAAACTGAGGCACTATGC+AGG | - | chr7.4:1299631-1299650 | MS.gene22809:intron | 45.0% |
| ! | TAATTTTGCCGCTGCTTCCA+CGG | + | chr7.4:1301669-1301688 | None:intergenic | 45.0% |
| ! | TACGTAGTTCCCTGGTTCTT+TGG | + | chr7.4:1301744-1301763 | None:intergenic | 45.0% |
| !! | CCTTAGAACTTCGGGTTGTT+AGG | - | chr7.4:1301885-1301904 | MS.gene22809:CDS | 45.0% |
| !! | GAACTTCGGGTTGTTAGGAA+AGG | - | chr7.4:1301890-1301909 | MS.gene22809:CDS | 45.0% |
| AGCAGTTCGAATGGAGGGAA+CGG | + | chr7.4:1299458-1299477 | None:intergenic | 50.0% | |
| CCGGCTGAGGATTAACACAA+AGG | + | chr7.4:1299819-1299838 | None:intergenic | 50.0% | |
| GAACCGTACTCTTGCAGTTC+TGG | - | chr7.4:1298523-1298542 | MS.gene22809:CDS | 50.0% | |
| GATGCTTCTCCCATTCTCAC+TGG | - | chr7.4:1298388-1298407 | MS.gene22809:CDS | 50.0% | |
| GCTGACTATGGAGCTTCTGA+AGG | - | chr7.4:1299673-1299692 | MS.gene22809:intron | 50.0% | |
| GTGCCAGAACTGCAAGAGTA+CGG | + | chr7.4:1298529-1298548 | None:intergenic | 50.0% | |
| TCATTCTCAAGCTGCGTGAG+AGG | + | chr7.4:1299787-1299806 | None:intergenic | 50.0% | |
| TCCATTTGCTTCCCTAGACC+CGG | - | chr7.4:1300460-1300479 | MS.gene22809:CDS | 50.0% | |
| TGTGTTAATCCTCAGCCGGT+GGG | - | chr7.4:1299820-1299839 | MS.gene22809:intron | 50.0% | |
| TTAACCTCAGTGAGTCCCAC+CGG | + | chr7.4:1299838-1299857 | None:intergenic | 50.0% | |
| TTGTGTTAATCCTCAGCCGG+TGG | - | chr7.4:1299819-1299838 | MS.gene22809:intron | 50.0% | |
| ! | ACTATGGAGCTTCTGAAGGG+TGG | - | chr7.4:1299677-1299696 | MS.gene22809:intron | 50.0% |
| !! | ATGCGGACTAATTTTCCGCG+AGG | - | chr7.4:1299312-1299331 | MS.gene22809:intron | 50.0% |
| ACAGTTAGCCGTGGAAGCAG+CGG | - | chr7.4:1301658-1301677 | MS.gene22809:intron | 55.0% | |
| ACCGGGTCTAGGGAAGCAAA+TGG | + | chr7.4:1300464-1300483 | None:intergenic | 55.0% | |
| ACTGCGAATGTGATGCTGGC+AGG | - | chr7.4:1300020-1300039 | MS.gene22809:intron | 55.0% | |
| ATTTGCTTCCCTAGACCCGG+TGG | - | chr7.4:1300463-1300482 | MS.gene22809:CDS | 55.0% | |
| CAGGTATAGGCTAGGGGATG+TGG | - | chr7.4:1301532-1301551 | MS.gene22809:intron | 55.0% | |
| TCCATTGACCACCGGGTCTA+GGG | + | chr7.4:1300474-1300493 | None:intergenic | 55.0% | |
| ! | GCAGTTCTGGCACTACGCAA+GGG | - | chr7.4:1298536-1298555 | MS.gene22809:CDS | 55.0% |
| ! | GGTTTGGCTCCATTGACCAC+CGG | + | chr7.4:1300482-1300501 | None:intergenic | 55.0% |
| ! | GTTTGGCTCCATTGACCACC+GGG | + | chr7.4:1300481-1300500 | None:intergenic | 55.0% |
| ! | TGCAGTTCTGGCACTACGCA+AGG | - | chr7.4:1298535-1298554 | MS.gene22809:CDS | 55.0% |
| CTCCATTGACCACCGGGTCT+AGG | + | chr7.4:1300475-1300494 | None:intergenic | 60.0% | |
| TCCCTAGACCCGGTGGTCAA+TGG | - | chr7.4:1300470-1300489 | MS.gene22809:CDS | 60.0% | |
| TCAGCCGGTGGGACTCACTG+AGG | - | chr7.4:1299831-1299850 | MS.gene22809:intron | 65.0% | |
| ! | TCAGTGAGTCCCACCGGCTG+AGG | + | chr7.4:1299832-1299851 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 1298145 | 1302066 | 1298145 | ID=MS.gene22809 |
| chr7.4 | mRNA | 1298145 | 1302066 | 1298145 | ID=MS.gene22809.t1;Parent=MS.gene22809 |
| chr7.4 | exon | 1301774 | 1302066 | 1301774 | ID=MS.gene22809.t1.exon1;Parent=MS.gene22809.t1 |
| chr7.4 | CDS | 1301774 | 1302066 | 1301774 | ID=cds.MS.gene22809.t1;Parent=MS.gene22809.t1 |
| chr7.4 | exon | 1301570 | 1301671 | 1301570 | ID=MS.gene22809.t1.exon2;Parent=MS.gene22809.t1 |
| chr7.4 | CDS | 1301570 | 1301671 | 1301570 | ID=cds.MS.gene22809.t1;Parent=MS.gene22809.t1 |
| chr7.4 | exon | 1300313 | 1301115 | 1300313 | ID=MS.gene22809.t1.exon3;Parent=MS.gene22809.t1 |
| chr7.4 | CDS | 1300313 | 1301115 | 1300313 | ID=cds.MS.gene22809.t1;Parent=MS.gene22809.t1 |
| chr7.4 | exon | 1298145 | 1298686 | 1298145 | ID=MS.gene22809.t1.exon4;Parent=MS.gene22809.t1 |
| chr7.4 | CDS | 1298145 | 1298686 | 1298145 | ID=cds.MS.gene22809.t1;Parent=MS.gene22809.t1 |
| Gene Sequence |
| Protein sequence |
