Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25647.t1 | XP_013450328.1 | 99.7 | 392 | 1 | 0 | 1 | 392 | 1 | 392 | 1.10E-197 | 699.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25647.t1 | Q8LFS6 | 62.9 | 402 | 129 | 8 | 1 | 392 | 1 | 392 | 4.8e-128 | 459.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25647.t1 | A0A072U4V5 | 99.7 | 392 | 1 | 0 | 1 | 392 | 1 | 392 | 8.3e-198 | 699.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052289 | MS.gene25647 | 0.813384 | 2.63E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene25647 | 0.805657 | 1.20E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25647 | MS.gene69969 | PPI |
| MS.gene29182 | MS.gene25647 | PPI |
| MS.gene25647 | MS.gene47029 | PPI |
| MS.gene25647 | MS.gene027709 | PPI |
| MS.gene86206 | MS.gene25647 | PPI |
| MS.gene25647 | MS.gene84284 | PPI |
| MS.gene99555 | MS.gene25647 | PPI |
| MS.gene37610 | MS.gene25647 | PPI |
| MS.gene034408 | MS.gene25647 | PPI |
| MS.gene23814 | MS.gene25647 | PPI |
| MS.gene35490 | MS.gene25647 | PPI |
| MS.gene25647 | MS.gene64891 | PPI |
| MS.gene25647 | MS.gene39783 | PPI |
| MS.gene055437 | MS.gene25647 | PPI |
| MS.gene25647 | MS.gene86544 | PPI |
| MS.gene066499 | MS.gene25647 | PPI |
| MS.gene44305 | MS.gene25647 | PPI |
| MS.gene25647 | MS.gene035578 | PPI |
| MS.gene25647 | MS.gene016896 | PPI |
| MS.gene72659 | MS.gene25647 | PPI |
| MS.gene25647 | MS.gene022650 | PPI |
| MS.gene25647 | MS.gene65332 | PPI |
| MS.gene25647 | MS.gene037838 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25647.t1 | MTR_7g107580 | 99.745 | 392 | 1 | 0 | 1 | 392 | 1 | 392 | 0.0 | 808 |
| MS.gene25647.t1 | MTR_7g107580 | 99.490 | 392 | 1 | 1 | 1 | 392 | 1 | 391 | 0.0 | 802 |
| MS.gene25647.t1 | MTR_7g107580 | 99.420 | 345 | 1 | 1 | 1 | 345 | 1 | 344 | 0.0 | 703 |
| MS.gene25647.t1 | MTR_4g122650 | 48.603 | 179 | 88 | 2 | 16 | 191 | 88 | 265 | 7.38e-52 | 184 |
| MS.gene25647.t1 | MTR_7g109810 | 30.556 | 216 | 127 | 2 | 16 | 214 | 74 | 283 | 1.51e-28 | 115 |
| MS.gene25647.t1 | MTR_7g109810 | 32.461 | 191 | 106 | 2 | 16 | 189 | 74 | 258 | 8.18e-28 | 111 |
| MS.gene25647.t1 | MTR_7g109810 | 32.984 | 191 | 105 | 3 | 16 | 189 | 74 | 258 | 1.21e-27 | 114 |
| MS.gene25647.t1 | MTR_4g085540 | 28.374 | 289 | 173 | 11 | 1 | 270 | 198 | 471 | 6.81e-16 | 79.7 |
| MS.gene25647.t1 | MTR_3g065190 | 25.514 | 243 | 166 | 6 | 6 | 245 | 16 | 246 | 2.08e-14 | 74.3 |
| MS.gene25647.t1 | MTR_1g097440 | 26.542 | 373 | 204 | 18 | 5 | 320 | 197 | 556 | 1.76e-13 | 72.4 |
| MS.gene25647.t1 | MTR_5g097580 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.05e-12 | 69.7 |
| MS.gene25647.t1 | MTR_5g097580 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.08e-12 | 69.7 |
| MS.gene25647.t1 | MTR_3g101370 | 24.138 | 261 | 157 | 8 | 4 | 247 | 175 | 411 | 1.56e-12 | 68.9 |
| MS.gene25647.t1 | MTR_2g026180 | 22.997 | 287 | 167 | 7 | 17 | 275 | 5 | 265 | 6.30e-12 | 67.4 |
| MS.gene25647.t1 | MTR_3g082650 | 25.146 | 171 | 109 | 4 | 17 | 178 | 19 | 179 | 2.27e-11 | 65.1 |
| MS.gene25647.t1 | MTR_7g118120 | 26.316 | 171 | 113 | 5 | 17 | 184 | 105 | 265 | 3.92e-11 | 64.7 |
| MS.gene25647.t1 | MTR_3g103420 | 24.339 | 189 | 120 | 3 | 12 | 177 | 6 | 194 | 6.39e-11 | 63.9 |
| MS.gene25647.t1 | MTR_1g019150 | 28.000 | 275 | 162 | 11 | 7 | 263 | 207 | 463 | 8.14e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25647.t1 | AT4G03110 | 68.462 | 390 | 96 | 9 | 15 | 392 | 17 | 391 | 0.0 | 512 |
| MS.gene25647.t1 | AT4G03110 | 68.542 | 391 | 95 | 10 | 15 | 392 | 17 | 392 | 0.0 | 509 |
| MS.gene25647.t1 | AT4G03110 | 68.542 | 391 | 95 | 10 | 15 | 392 | 17 | 392 | 1.68e-180 | 509 |
| MS.gene25647.t1 | AT1G03457 | 65.051 | 392 | 110 | 10 | 7 | 392 | 3 | 373 | 1.45e-173 | 491 |
| MS.gene25647.t1 | AT1G03457 | 63.591 | 401 | 110 | 11 | 7 | 392 | 3 | 382 | 4.40e-170 | 483 |
| MS.gene25647.t1 | AT1G03457 | 60.900 | 289 | 86 | 10 | 110 | 392 | 1 | 268 | 1.71e-106 | 317 |
| MS.gene25647.t1 | AT4G16280 | 44.751 | 181 | 96 | 2 | 10 | 187 | 114 | 293 | 1.39e-49 | 175 |
| MS.gene25647.t1 | AT4G16280 | 44.262 | 183 | 98 | 2 | 10 | 189 | 39 | 220 | 1.36e-48 | 175 |
| MS.gene25647.t1 | AT4G16280 | 44.262 | 183 | 98 | 2 | 10 | 189 | 114 | 295 | 1.80e-48 | 175 |
| MS.gene25647.t1 | AT2G47310 | 32.967 | 182 | 112 | 2 | 17 | 189 | 111 | 291 | 4.89e-26 | 109 |
| MS.gene25647.t1 | AT4G34110 | 27.305 | 282 | 171 | 11 | 1 | 263 | 200 | 466 | 5.37e-15 | 77.0 |
| MS.gene25647.t1 | AT4G00830 | 26.901 | 171 | 112 | 5 | 17 | 184 | 117 | 277 | 4.25e-14 | 73.9 |
| MS.gene25647.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.69e-14 | 73.9 |
| MS.gene25647.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.69e-14 | 73.9 |
| MS.gene25647.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.69e-14 | 73.9 |
| MS.gene25647.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 4.99e-14 | 73.9 |
| MS.gene25647.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 4.99e-14 | 73.9 |
| MS.gene25647.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 4.99e-14 | 73.9 |
| MS.gene25647.t1 | AT1G71770 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 2.82e-13 | 72.0 |
| MS.gene25647.t1 | AT1G71770 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 2.82e-13 | 72.0 |
| MS.gene25647.t1 | AT2G18510 | 26.316 | 228 | 155 | 7 | 6 | 227 | 16 | 236 | 3.06e-13 | 70.9 |
| MS.gene25647.t1 | AT4G00830 | 28.402 | 169 | 104 | 4 | 17 | 184 | 117 | 269 | 1.46e-12 | 69.3 |
| MS.gene25647.t1 | AT4G00830 | 28.402 | 169 | 104 | 4 | 17 | 184 | 117 | 269 | 1.46e-12 | 69.3 |
| MS.gene25647.t1 | AT3G13224 | 21.698 | 212 | 131 | 4 | 17 | 220 | 20 | 204 | 1.53e-11 | 65.9 |
| MS.gene25647.t1 | AT5G40490 | 26.316 | 171 | 107 | 4 | 17 | 178 | 43 | 203 | 4.44e-11 | 64.7 |
| MS.gene25647.t1 | AT5G50250 | 24.324 | 185 | 123 | 4 | 14 | 187 | 111 | 289 | 6.46e-11 | 63.2 |
| MS.gene25647.t1 | AT1G58470 | 22.878 | 271 | 151 | 9 | 14 | 255 | 4 | 245 | 8.01e-11 | 63.5 |
| MS.gene25647.t1 | AT1G58470 | 22.878 | 271 | 151 | 9 | 14 | 255 | 4 | 245 | 8.01e-11 | 63.5 |
| MS.gene25647.t1 | AT3G13224 | 21.698 | 212 | 131 | 4 | 17 | 220 | 11 | 195 | 8.48e-11 | 63.2 |
| MS.gene25647.t1 | AT2G23350 | 26.377 | 345 | 208 | 17 | 1 | 324 | 210 | 529 | 9.26e-11 | 63.9 |
Find 104 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAGCATCCTTCATTATT+TGG | 0.145202 | 7.3:+81587289 | MS.gene25647:CDS |
| TATCACATACCTCAAGAATT+TGG | 0.267175 | 7.3:+81588355 | MS.gene25647:CDS |
| CCTGGTTCTGTTTCACCTTC+CGG | 0.267526 | 7.3:+81587796 | MS.gene25647:CDS |
| TCAACTTCAGAAATGTTCTT+TGG | 0.277981 | 7.3:-81585700 | None:intergenic |
| CTGTGCTTTCTGAGCTCTTC+GGG | 0.289780 | 7.3:-81587239 | None:intergenic |
| CTCCAAGTATGGAACTATAA+AGG | 0.292179 | 7.3:+81585738 | MS.gene25647:CDS |
| AGAACAAGCTCTTGCTGCTT+TGG | 0.295520 | 7.3:+81585934 | MS.gene25647:CDS |
| ACACGCATTAACGGCCTTAT+CGG | 0.303507 | 7.3:-81584390 | None:intergenic |
| GGCTCTTATCCTGCTGTGCC+AGG | 0.318239 | 7.3:+81587712 | MS.gene25647:CDS |
| TAGTTTCTAGGATTCATATT+GGG | 0.327152 | 7.3:-81587664 | None:intergenic |
| GGCAACTCCGCTACATCATC+AGG | 0.339581 | 7.3:+81587826 | MS.gene25647:CDS |
| AGCAGCAAGAGCTTGTTCTT+TGG | 0.340647 | 7.3:-81585930 | None:intergenic |
| GTTCCTCCATATAACGGTTA+TGG | 0.352351 | 7.3:+81587331 | MS.gene25647:CDS |
| TGATAGGCTCCTGGAAGTTA+TGG | 0.362020 | 7.3:+81587538 | MS.gene25647:intron |
| TGATAGCCATAACCGTTATA+TGG | 0.365595 | 7.3:-81587337 | None:intergenic |
| ACCGGTGTTAGCAAATGTTT+TGG | 0.367022 | 7.3:+81588451 | MS.gene25647:CDS |
| GGAGGCACATGATAGTTTCT+AGG | 0.370299 | 7.3:-81587676 | None:intergenic |
| ATATAACGGTTATGGCTATC+AGG | 0.373888 | 7.3:+81587339 | MS.gene25647:CDS |
| GTTTCACCTTCCGGTGGAAA+TGG | 0.379419 | 7.3:+81587805 | MS.gene25647:CDS |
| TTCATATTGGGGCCGAGATC+TGG | 0.379609 | 7.3:-81587652 | None:intergenic |
| GCTAATGCCTTTCAACCATT+TGG | 0.382505 | 7.3:+81588391 | MS.gene25647:CDS |
| CTTATTGTGACACGCATTAA+CGG | 0.390856 | 7.3:-81584399 | None:intergenic |
| ATCCTTTATAGTTCCATACT+TGG | 0.391509 | 7.3:-81585740 | None:intergenic |
| ACTGTGCTTTCTGAGCTCTT+CGG | 0.392609 | 7.3:-81587240 | None:intergenic |
| TCATCTTCCGTCATGTGTTT+CGG | 0.395974 | 7.3:-81584139 | None:intergenic |
| TCAGAACACAAACTCTTCAT+TGG | 0.399593 | 7.3:+81585670 | MS.gene25647:intron |
| GTGTTCCCTTAGTTGTCAAA+TGG | 0.401234 | 7.3:+81587191 | MS.gene25647:CDS |
| ATAGTTTCTAGGATTCATAT+TGG | 0.403096 | 7.3:-81587665 | None:intergenic |
| AATCAATGGAAAGCACAAAA+TGG | 0.410828 | 7.3:+81585961 | MS.gene25647:CDS |
| GATAGGCTCCTGGAAGTTAT+GGG | 0.413886 | 7.3:+81587539 | MS.gene25647:intron |
| TAAGAGCCAACATAACTTGC+AGG | 0.416204 | 7.3:-81587697 | None:intergenic |
| TCACAATAAGAAAACATTAC+CGG | 0.421330 | 7.3:+81584412 | MS.gene25647:CDS |
| GGCATGAGCCCATAACTTCC+AGG | 0.430186 | 7.3:-81587547 | None:intergenic |
| ATTATTTGGAGCCATGCCTA+TGG | 0.433566 | 7.3:+81587303 | MS.gene25647:CDS |
| ACAAGCTCTTGCTGCTTTGG+AGG | 0.434947 | 7.3:+81585937 | MS.gene25647:CDS |
| CCAGGTTGATTCTGCATTGG+TGG | 0.451380 | 7.3:-81587583 | None:intergenic |
| TTATCGGCTTCATCTCTAGA+AGG | 0.468242 | 7.3:-81584374 | None:intergenic |
| ATCAGCCCATTTGACAACTA+AGG | 0.471151 | 7.3:-81587197 | None:intergenic |
| TGTTGTAACCCTGGCACAGC+AGG | 0.473768 | 7.3:-81587721 | None:intergenic |
| GCTGCTTTGGAGGCAATCAA+TGG | 0.477211 | 7.3:+81585947 | MS.gene25647:CDS |
| TTCTAGAGATGAAGCCGATA+AGG | 0.478824 | 7.3:+81584376 | MS.gene25647:CDS |
| GCACTCAAAACTCTACCAAA+TGG | 0.487510 | 7.3:-81588406 | None:intergenic |
| CACAATAAGAAAACATTACC+GGG | 0.488544 | 7.3:+81584413 | MS.gene25647:CDS |
| AATGCATTGCGGCCAGATCT+CGG | 0.489842 | 7.3:+81587640 | MS.gene25647:CDS |
| GGTTATGTTCCTCCATATAA+CGG | 0.491884 | 7.3:+81587325 | MS.gene25647:CDS |
| CAAATGGGCTGATACTGAAA+AGG | 0.494167 | 7.3:+81587207 | MS.gene25647:CDS |
| TGTTCCCTTAGTTGTCAAAT+GGG | 0.495874 | 7.3:+81587192 | MS.gene25647:CDS |
| GTGCCTCCTGCAAGTTATGT+TGG | 0.499189 | 7.3:+81587691 | MS.gene25647:CDS |
| GGAGGACTATTCAAAGGTCT+TGG | 0.500082 | 7.3:-81587775 | None:intergenic |
| GCTCTTATCCTGCTGTGCCA+GGG | 0.508282 | 7.3:+81587713 | MS.gene25647:CDS |
| GGTTGATTCTGCATTGGTGG+CGG | 0.512156 | 7.3:-81587580 | None:intergenic |
| ATGATGCCTCACATGAATCA+AGG | 0.516257 | 7.3:+81587616 | MS.gene25647:CDS |
| CAACATCCAATGGCATATCC+TGG | 0.520136 | 7.3:+81587739 | MS.gene25647:CDS |
| AACTCTACCAAATGGTTGAA+AGG | 0.528070 | 7.3:-81588398 | None:intergenic |
| AGTTTCTAGGATTCATATTG+GGG | 0.528224 | 7.3:-81587663 | None:intergenic |
| AGACCTTTGAATAGTCCTCC+TGG | 0.532938 | 7.3:+81587778 | MS.gene25647:CDS |
| TCTGGTGGTGGTCAAGCTGA+AGG | 0.536580 | 7.3:+81587862 | MS.gene25647:CDS |
| GACATTAATGGCGGAAACAA+AGG | 0.537761 | 7.3:+81584063 | None:intergenic |
| AGCGGAGTTGCCATTTCCAC+CGG | 0.538304 | 7.3:-81587815 | None:intergenic |
| GGTTCTCAACAGACAAGTAA+AGG | 0.545378 | 7.3:+81585778 | MS.gene25647:CDS |
| TTATTTGGAGCCATGCCTAT+GGG | 0.546418 | 7.3:+81587304 | MS.gene25647:CDS |
| CCACCAATGCAGAATCAACC+TGG | 0.548396 | 7.3:+81587583 | MS.gene25647:CDS |
| ATAGCAAATTCTTTGAACAA+TGG | 0.550820 | 7.3:-81584169 | None:intergenic |
| ATTGGTGGCGGCATGCGGTA+CGG | 0.551343 | 7.3:-81587568 | None:intergenic |
| TAACCAGGTTGATTCTGCAT+TGG | 0.557945 | 7.3:-81587586 | None:intergenic |
| TCTTGATCTCCAAATTCTTG+AGG | 0.562460 | 7.3:-81588364 | None:intergenic |
| GGCATGGCTCCAAATAATGA+AGG | 0.562854 | 7.3:-81587298 | None:intergenic |
| GAAGTATGCAGATGGCGAGT+TGG | 0.566206 | 7.3:+81585503 | MS.gene25647:CDS |
| TCTGCATACTTCACTTGCAA+TGG | 0.570290 | 7.3:-81585492 | None:intergenic |
| ATTCCTCCAGGATATGCCAT+TGG | 0.572038 | 7.3:-81587745 | None:intergenic |
| ACCAAAACATTTGCTAACAC+CGG | 0.572530 | 7.3:-81588452 | None:intergenic |
| CCGGAAGGTGAAACAGAACC+AGG | 0.575325 | 7.3:-81587796 | None:intergenic |
| GGCATCATATTGTGGTAACC+AGG | 0.578815 | 7.3:-81587601 | None:intergenic |
| GGTTCTGTTTCACCTTCCGG+TGG | 0.581373 | 7.3:+81587799 | MS.gene25647:CDS |
| CTTGGACTAATCATTCCTCC+AGG | 0.583450 | 7.3:-81587757 | None:intergenic |
| GATGGCGAGTTGGAAAGATT+AGG | 0.585947 | 7.3:+81585513 | MS.gene25647:CDS |
| TCAGCCCATTTGACAACTAA+GGG | 0.587954 | 7.3:-81587196 | None:intergenic |
| AAAGCTACACGCGCTTCTCG+AGG | 0.592067 | 7.3:+81584220 | MS.gene25647:CDS |
| ACAGTCTCAAGCTTCTAATG+TGG | 0.599106 | 7.3:+81587258 | MS.gene25647:CDS |
| GCCAGGGTTACAACATCCAA+TGG | 0.600312 | 7.3:+81587729 | MS.gene25647:CDS |
| CAGTCTCAAGCTTCTAATGT+GGG | 0.603411 | 7.3:+81587259 | MS.gene25647:CDS |
| TAGATAAACAGATTTGCGCC+AGG | 0.605436 | 7.3:-81588334 | None:intergenic |
| GAAAGTGTGAAATTGTTCGT+AGG | 0.610831 | 7.3:+81584109 | MS.gene25647:CDS |
| TCTGCATTGGTGGCGGCATG+CGG | 0.611389 | 7.3:-81587573 | None:intergenic |
| GCCATTGGATGTTGTAACCC+TGG | 0.618480 | 7.3:-81587730 | None:intergenic |
| GCATTTCCTTGATTCATGTG+AGG | 0.618490 | 7.3:-81587622 | None:intergenic |
| TTGCAAGTGAAGTATGCAGA+TGG | 0.626113 | 7.3:+81585495 | MS.gene25647:CDS |
| TATGGAGGAACATAACCCAT+AGG | 0.632075 | 7.3:-81587319 | None:intergenic |
| CAATGGAAAGCACAAAATGG+AGG | 0.634591 | 7.3:+81585964 | MS.gene25647:CDS |
| GAACCAGGAGGACTATTCAA+AGG | 0.637034 | 7.3:-81587781 | None:intergenic |
| TCATGTGAGGCATCATATTG+TGG | 0.649926 | 7.3:-81587609 | None:intergenic |
| GAGTTGCCATTTCCACCGGA+AGG | 0.654667 | 7.3:-81587811 | None:intergenic |
| GCAACTCCGCTACATCATCA+GGG | 0.663111 | 7.3:+81587827 | MS.gene25647:CDS |
| GCTGGACCCTGATGATGTAG+CGG | 0.669272 | 7.3:-81587833 | None:intergenic |
| AGGAACATAACCCATAGGCA+TGG | 0.673621 | 7.3:-81587314 | None:intergenic |
| TAGCCATAACCGTTATATGG+AGG | 0.682373 | 7.3:-81587334 | None:intergenic |
| TGAATCAAGGAAATGCATTG+CGG | 0.688594 | 7.3:+81587629 | MS.gene25647:CDS |
| TCAAGTACCGAAACACATGA+CGG | 0.692471 | 7.3:+81584132 | MS.gene25647:CDS |
| ATAAACAGATTTGCGCCAGG+TGG | 0.694236 | 7.3:-81588331 | None:intergenic |
| ACAATAAGAAAACATTACCG+GGG | 0.696985 | 7.3:+81584414 | MS.gene25647:CDS |
| GAGCCAACATAACTTGCAGG+AGG | 0.697782 | 7.3:-81587694 | None:intergenic |
| CAATAAGAAAACATTACCGG+GGG | 0.709469 | 7.3:+81584415 | MS.gene25647:CDS |
| CATCCAATGGCATATCCTGG+AGG | 0.717452 | 7.3:+81587742 | MS.gene25647:CDS |
| GAAGGTGAAACAGAACCAGG+AGG | 0.777635 | 7.3:-81587793 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAATTATGTAATTAT+TGG | + | chr7.3:81585016-81585035 | MS.gene25647:intron | 10.0% |
| !! | GTCATATAAATAATTATTAA+CGG | - | chr7.3:81586684-81586703 | None:intergenic | 10.0% |
| !! | TCATATAAATAATTATTAAC+GGG | - | chr7.3:81586683-81586702 | None:intergenic | 10.0% |
| !! | TTAATAATTATTTATATGAC+AGG | + | chr7.3:81586684-81586703 | MS.gene25647:intron | 10.0% |
| !!! | GTAATATAATGTATTTTATA+TGG | + | chr7.3:81586067-81586086 | MS.gene25647:intron | 10.0% |
| !! | AAAAAAAAAACACGAAAATT+AGG | - | chr7.3:81584328-81584347 | None:intergenic | 15.0% |
| !! | AATAATGATACAAAATAATG+TGG | - | chr7.3:81585418-81585437 | None:intergenic | 15.0% |
| !! | ATTTCTATAATTAAGTTTAG+TGG | + | chr7.3:81585047-81585066 | MS.gene25647:intron | 15.0% |
| !! | CATGTTGATATATTTATATT+CGG | + | chr7.3:81587935-81587954 | MS.gene25647:intron | 15.0% |
| !! | CTGATAATAATTTAAGAAAA+TGG | + | chr7.3:81584791-81584810 | MS.gene25647:intron | 15.0% |
| !! | GGAATAAAATTTAAAAATTC+AGG | - | chr7.3:81586012-81586031 | None:intergenic | 15.0% |
| !! | TAATAATTTAAGAAAATGGA+CGG | + | chr7.3:81584795-81584814 | MS.gene25647:intron | 15.0% |
| !! | TCATATGAATTGAATAAAAA+CGG | - | chr7.3:81584491-81584510 | None:intergenic | 15.0% |
| !!! | AATTTTAGCAATTTATGTTT+TGG | + | chr7.3:81584613-81584632 | MS.gene25647:intron | 15.0% |
| !!! | ATATTACTATATTTTCACTT+AGG | + | chr7.3:81588307-81588326 | MS.gene25647:intron | 15.0% |
| !!! | TTATTCCTATTTTTCATTTT+TGG | + | chr7.3:81586025-81586044 | MS.gene25647:intron | 15.0% |
| !! | AAAATTGAAATAACAATTGC+AGG | - | chr7.3:81586574-81586593 | None:intergenic | 20.0% |
| !! | AAATTTAAAAATTCAGGTGA+TGG | - | chr7.3:81586006-81586025 | None:intergenic | 20.0% |
| !! | AATAAGTTAAAGGACTAAAA+AGG | - | chr7.3:81587969-81587988 | None:intergenic | 20.0% |
| !! | AATAATTTAAGAAAATGGAC+GGG | + | chr7.3:81584796-81584815 | MS.gene25647:intron | 20.0% |
| !! | AGATAATTACTTATGAAAGA+AGG | - | chr7.3:81585637-81585656 | None:intergenic | 20.0% |
| !! | ATTATATTACACAATTAACC+TGG | - | chr7.3:81586057-81586076 | None:intergenic | 20.0% |
| !! | ATTATTATCAGTGTCATATA+TGG | - | chr7.3:81584782-81584801 | None:intergenic | 20.0% |
| !! | ATTCATTCTTTATTCTTTCT+AGG | + | chr7.3:81585819-81585838 | MS.gene25647:intron | 20.0% |
| !! | CATTAGTGACATAATTAAAA+TGG | - | chr7.3:81585244-81585263 | None:intergenic | 20.0% |
| !! | TACTACCAAAAATGAAAAAT+AGG | - | chr7.3:81586033-81586052 | None:intergenic | 20.0% |
| !! | TAGTAATATTTATCGTTGTA+AGG | - | chr7.3:81588296-81588315 | None:intergenic | 20.0% |
| !!! | AAAATGTGATGATTTTTGAA+TGG | - | chr7.3:81587446-81587465 | None:intergenic | 20.0% |
| !!! | AAGGATTTACAAATTTTAAG+AGG | + | chr7.3:81585757-81585776 | MS.gene25647:CDS | 20.0% |
| !!! | ATCTCTAAAATGAGTAAATT+TGG | - | chr7.3:81588195-81588214 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTGTTTCTAATTC+AGG | + | chr7.3:81585461-81585480 | MS.gene25647:intron | 20.0% |
| !!! | CATCTTGTATTTAAAATGAT+TGG | - | chr7.3:81586199-81586218 | None:intergenic | 20.0% |
| !!! | GTTACAATTTTAGTTGTAAA+TGG | + | chr7.3:81586452-81586471 | MS.gene25647:intron | 20.0% |
| !!! | TAAAGCCTTAAATACATTTT+TGG | - | chr7.3:81588254-81588273 | None:intergenic | 20.0% |
| !!! | TCATTTTAAATACAAGATGA+AGG | + | chr7.3:81586200-81586219 | MS.gene25647:intron | 20.0% |
| !!! | TTCGTGTTTTTTTTTTTTGT+AGG | + | chr7.3:81584332-81584351 | MS.gene25647:intron | 20.0% |
| ! | AATGATAATAAATGACTTCC+AGG | - | chr7.3:81587069-81587088 | None:intergenic | 25.0% |
| ! | ACTACTATTTAGCAATATAG+TGG | + | chr7.3:81586279-81586298 | MS.gene25647:intron | 25.0% |
| ! | AGTTAACGTAATTCATTCAT+AGG | - | chr7.3:81585196-81585215 | None:intergenic | 25.0% |
| ! | ATAATTTAAGAAAATGGACG+GGG | + | chr7.3:81584797-81584816 | MS.gene25647:intron | 25.0% |
| ! | ATAGCAAATTCTTTGAACAA+TGG | - | chr7.3:81584172-81584191 | None:intergenic | 25.0% |
| ! | ATATTTGTATCACAACTACT+TGG | - | chr7.3:81585297-81585316 | None:intergenic | 25.0% |
| ! | CATTATTCTTCATTCAGATT+GGG | + | chr7.3:81585431-81585450 | MS.gene25647:intron | 25.0% |
| ! | GAACCTCAAAAATAAGTTAA+AGG | - | chr7.3:81587979-81587998 | None:intergenic | 25.0% |
| ! | GCATGTCATTGATATAAAAA+TGG | - | chr7.3:81585615-81585634 | None:intergenic | 25.0% |
| ! | GGAAGTCATTTATTATCATT+TGG | + | chr7.3:81587069-81587088 | MS.gene25647:intron | 25.0% |
| ! | GTTCATCAAAATAACAAACT+TGG | - | chr7.3:81584884-81584903 | None:intergenic | 25.0% |
| ! | GTTTAGGGAAATAGTAATAA+AGG | - | chr7.3:81588138-81588157 | None:intergenic | 25.0% |
| ! | TAATTCATTCATAGGTTACT+TGG | - | chr7.3:81585188-81585207 | None:intergenic | 25.0% |
| ! | TACAACTAAAATTGTAACTG+AGG | - | chr7.3:81586450-81586469 | None:intergenic | 25.0% |
| ! | TAGTAGATTTGAAGAATTAG+CGG | - | chr7.3:81584286-81584305 | None:intergenic | 25.0% |
| ! | TATGAATGAATTACGTTAAC+TGG | + | chr7.3:81585195-81585214 | MS.gene25647:intron | 25.0% |
| ! | TCAAAATGTTCAATAGTATC+CGG | - | chr7.3:81585330-81585349 | None:intergenic | 25.0% |
| ! | TCACAATAAGAAAACATTAC+CGG | + | chr7.3:81584412-81584431 | MS.gene25647:CDS | 25.0% |
| ! | TCATTATTCTTCATTCAGAT+TGG | + | chr7.3:81585430-81585449 | MS.gene25647:intron | 25.0% |
| ! | TCATTCTATACAGAAATAGA+AGG | + | chr7.3:81586125-81586144 | MS.gene25647:intron | 25.0% |
| ! | TCTATAATTAAGTTTAGTGG+CGG | + | chr7.3:81585050-81585069 | MS.gene25647:intron | 25.0% |
| ! | TTATTACTATTTCCCTAAAC+TGG | + | chr7.3:81588138-81588157 | MS.gene25647:intron | 25.0% |
| !! | GACATTAATTTTCTCTTGAT+AGG | + | chr7.3:81587522-81587541 | MS.gene25647:intron | 25.0% |
| !! | TCTTTATTCTTTCTAGGTTT+TGG | + | chr7.3:81585825-81585844 | MS.gene25647:intron | 25.0% |
| !! | TGCGTTTCATTGAAATTTTT+GGG | + | chr7.3:81585153-81585172 | MS.gene25647:intron | 25.0% |
| !! | TTAGATAGATAACATGCTTT+TGG | + | chr7.3:81586384-81586403 | MS.gene25647:intron | 25.0% |
| !! | TTATGCTGTTTAATTCAATG+TGG | + | chr7.3:81584463-81584482 | MS.gene25647:intron | 25.0% |
| !! | TTGCGTTTCATTGAAATTTT+TGG | + | chr7.3:81585152-81585171 | MS.gene25647:intron | 25.0% |
| !!! | AAGTAAAGGTGCTTATTTTA+CGG | + | chr7.3:81585792-81585811 | MS.gene25647:intron | 25.0% |
| !!! | AGTCCTTTAACTTATTTTTG+AGG | + | chr7.3:81587973-81587992 | MS.gene25647:intron | 25.0% |
| !!! | ATAGACTCATTTTAGAGTTA+AGG | - | chr7.3:81588011-81588030 | None:intergenic | 25.0% |
| !!! | ATAGTTTCTAGGATTCATAT+TGG | - | chr7.3:81587668-81587687 | None:intergenic | 25.0% |
| !!! | CTTATTTTTGAGGTTCAATT+TGG | + | chr7.3:81587983-81588002 | MS.gene25647:intron | 25.0% |
| !!! | TAGACTCATTTTAGAGTTAA+GGG | - | chr7.3:81588010-81588029 | None:intergenic | 25.0% |
| !!! | TAGTTTCTAGGATTCATATT+GGG | - | chr7.3:81587667-81587686 | None:intergenic | 25.0% |
| AAAATTGTAACTGAGGTTGA+AGG | - | chr7.3:81586443-81586462 | None:intergenic | 30.0% | |
| AAATGGTCTTTGCAGTATAT+TGG | + | chr7.3:81586469-81586488 | MS.gene25647:intron | 30.0% | |
| AACCAAAAATGTGAAACACT+AGG | - | chr7.3:81584711-81584730 | None:intergenic | 30.0% | |
| ACAATAAGAAAACATTACCG+GGG | + | chr7.3:81584414-81584433 | MS.gene25647:CDS | 30.0% | |
| ACACACATGACAAAATTTGA+CGG | + | chr7.3:81587106-81587125 | MS.gene25647:intron | 30.0% | |
| ACCAAAAATGTGAAACACTA+GGG | - | chr7.3:81584710-81584729 | None:intergenic | 30.0% | |
| AGGGACCAAAAATGTATTTA+AGG | + | chr7.3:81588246-81588265 | MS.gene25647:intron | 30.0% | |
| ATCCTTTATAGTTCCATACT+TGG | - | chr7.3:81585743-81585762 | None:intergenic | 30.0% | |
| ATTCAGTCACAAAATCTTGT+TGG | + | chr7.3:81586505-81586524 | MS.gene25647:intron | 30.0% | |
| ATTGAACAGATAAGGATGAT+TGG | + | chr7.3:81584919-81584938 | MS.gene25647:intron | 30.0% | |
| CACAATAAGAAAACATTACC+GGG | + | chr7.3:81584413-81584432 | MS.gene25647:CDS | 30.0% | |
| GATATATGCTGTCATGTATA+GGG | + | chr7.3:81587163-81587182 | MS.gene25647:intron | 30.0% | |
| GATGCATTATTGAACAGATA+AGG | + | chr7.3:81584911-81584930 | MS.gene25647:intron | 30.0% | |
| TACAAATATGCCTAAAAAGC+CGG | + | chr7.3:81585308-81585327 | MS.gene25647:intron | 30.0% | |
| TAGTAATAAAGGCTTAGCTT+TGG | - | chr7.3:81588127-81588146 | None:intergenic | 30.0% | |
| TATCACATACCTCAAGAATT+TGG | + | chr7.3:81588355-81588374 | MS.gene25647:CDS | 30.0% | |
| TCAACTTCAGAAATGTTCTT+TGG | - | chr7.3:81585703-81585722 | None:intergenic | 30.0% | |
| TCACTTGCAATGTTTGATAA+CGG | - | chr7.3:81588172-81588191 | None:intergenic | 30.0% | |
| TGATATATGCTGTCATGTAT+AGG | + | chr7.3:81587162-81587181 | MS.gene25647:intron | 30.0% | |
| TGCAAACACAAGACAAAAAA+AGG | - | chr7.3:81587043-81587062 | None:intergenic | 30.0% | |
| TTCCTTAATCACAATTCACA+AGG | + | chr7.3:81585850-81585869 | MS.gene25647:intron | 30.0% | |
| ! | AATCAATGGAAAGCACAAAA+TGG | + | chr7.3:81585961-81585980 | MS.gene25647:CDS | 30.0% |
| ! | AGCATCTGATCAGTAATTTT+GGG | - | chr7.3:81587004-81587023 | None:intergenic | 30.0% |
| ! | AGGGAAAATAATTTGTGCTT+GGG | - | chr7.3:81586962-81586981 | None:intergenic | 30.0% |
| ! | ATTATTAACGGGTAAAACCT+AGG | - | chr7.3:81586672-81586691 | None:intergenic | 30.0% |
| ! | GAACACTATTTTCTTTGACA+AGG | - | chr7.3:81584981-81585000 | None:intergenic | 30.0% |
| ! | TAGCATCTGATCAGTAATTT+TGG | - | chr7.3:81587005-81587024 | None:intergenic | 30.0% |
| !! | AGTTTCTAGGATTCATATTG+GGG | - | chr7.3:81587666-81587685 | None:intergenic | 30.0% |
| !!! | TGGTGCTTATTGCTATTTTT+GGG | + | chr7.3:81584633-81584652 | MS.gene25647:intron | 30.0% |
| !!! | TTGGTGCTTATTGCTATTTT+TGG | + | chr7.3:81584632-81584651 | MS.gene25647:intron | 30.0% |
| AACTCTACCAAATGGTTGAA+AGG | - | chr7.3:81588401-81588420 | None:intergenic | 35.0% | |
| AACTTGATCCAAGTTTGGAA+AGG | + | chr7.3:81586711-81586730 | MS.gene25647:intron | 35.0% | |
| AATGAATTACGTTAACTGGC+AGG | + | chr7.3:81585199-81585218 | MS.gene25647:intron | 35.0% | |
| ACCAAACCGAACCTTAAATT+AGG | + | chr7.3:81588220-81588239 | MS.gene25647:intron | 35.0% | |
| ACTTGATCCAAGTTTGGAAA+GGG | + | chr7.3:81586712-81586731 | MS.gene25647:intron | 35.0% | |
| AGCCATCCAAAAAGAATAAG+CGG | - | chr7.3:81586171-81586190 | None:intergenic | 35.0% | |
| AGCTGAATAAATCTCAAGAC+TGG | + | chr7.3:81586789-81586808 | MS.gene25647:intron | 35.0% | |
| AGTGATGAAAGCTATAAGAG+TGG | - | chr7.3:81584663-81584682 | None:intergenic | 35.0% | |
| ATACAGAAATAGAAGGCAAG+TGG | + | chr7.3:81586132-81586151 | MS.gene25647:intron | 35.0% | |
| ATATAACGGTTATGGCTATC+AGG | + | chr7.3:81587339-81587358 | MS.gene25647:CDS | 35.0% | |
| ATGTGAAACACTAGGGTATA+TGG | - | chr7.3:81584703-81584722 | None:intergenic | 35.0% | |
| CAAAATGGAAACCTAATGGT+GGG | + | chr7.3:81586606-81586625 | MS.gene25647:intron | 35.0% | |
| CAATAAGAAAACATTACCGG+GGG | + | chr7.3:81584415-81584434 | MS.gene25647:CDS | 35.0% | |
| CGAACCTTAAATTAGGCTAA+GGG | + | chr7.3:81588227-81588246 | MS.gene25647:intron | 35.0% | |
| CTCCAAGTATGGAACTATAA+AGG | + | chr7.3:81585738-81585757 | MS.gene25647:CDS | 35.0% | |
| CTTATTGTGACACGCATTAA+CGG | - | chr7.3:81584402-81584421 | None:intergenic | 35.0% | |
| GACATAATTAAAATGGAGCG+TGG | - | chr7.3:81585237-81585256 | None:intergenic | 35.0% | |
| GAGAAGAACTGCATGAATTA+AGG | - | chr7.3:81587409-81587428 | None:intergenic | 35.0% | |
| GCTGAATAAATCTCAAGACT+GGG | + | chr7.3:81586790-81586809 | MS.gene25647:intron | 35.0% | |
| GGTTATGTTCCTCCATATAA+CGG | + | chr7.3:81587325-81587344 | MS.gene25647:CDS | 35.0% | |
| GTCTCAAAATGGAAACCTAA+TGG | + | chr7.3:81586602-81586621 | MS.gene25647:intron | 35.0% | |
| GTCTTGAGATTTATTCAGCT+CGG | - | chr7.3:81586789-81586808 | None:intergenic | 35.0% | |
| GTGATGAAAGCTATAAGAGT+GGG | - | chr7.3:81584662-81584681 | None:intergenic | 35.0% | |
| TACAGAAATAGAAGGCAAGT+GGG | + | chr7.3:81586133-81586152 | MS.gene25647:intron | 35.0% | |
| TCAAAATGGAAACCTAATGG+TGG | + | chr7.3:81586605-81586624 | MS.gene25647:intron | 35.0% | |
| TCAGAACACAAACTCTTCAT+TGG | + | chr7.3:81585670-81585689 | MS.gene25647:intron | 35.0% | |
| TCTCAGCATCCTTCATTATT+TGG | + | chr7.3:81587289-81587308 | MS.gene25647:CDS | 35.0% | |
| TCTTGAGATTTATTCAGCTC+GGG | - | chr7.3:81586788-81586807 | None:intergenic | 35.0% | |
| TCTTGATCTCCAAATTCTTG+AGG | - | chr7.3:81588367-81588386 | None:intergenic | 35.0% | |
| TGAATCAAGGAAATGCATTG+CGG | + | chr7.3:81587629-81587648 | MS.gene25647:CDS | 35.0% | |
| TGATAGCCATAACCGTTATA+TGG | - | chr7.3:81587340-81587359 | None:intergenic | 35.0% | |
| TGTGAAACACTAGGGTATAT+GGG | - | chr7.3:81584702-81584721 | None:intergenic | 35.0% | |
| TGTTCCCTTAGTTGTCAAAT+GGG | + | chr7.3:81587192-81587211 | MS.gene25647:CDS | 35.0% | |
| TTATGTCCGTTAACACAAGT+TGG | + | chr7.3:81588044-81588063 | MS.gene25647:intron | 35.0% | |
| TTCTCTTACCATGTTGTAGT+AGG | + | chr7.3:81585884-81585903 | MS.gene25647:intron | 35.0% | |
| TTTGACGACTTGATTATCCA+AGG | + | chr7.3:81585345-81585364 | MS.gene25647:intron | 35.0% | |
| TTTGTATCACAACTACTTGG+AGG | - | chr7.3:81585294-81585313 | None:intergenic | 35.0% | |
| TTTGTATCCCTGTCTCAAAA+TGG | + | chr7.3:81586591-81586610 | MS.gene25647:intron | 35.0% | |
| ! | AACCGCTTATTCTTTTTGGA+TGG | + | chr7.3:81586166-81586185 | MS.gene25647:intron | 35.0% |
| ! | ACCCTAGTGTTTCACATTTT+TGG | + | chr7.3:81584706-81584725 | MS.gene25647:intron | 35.0% |
| ! | AGCCTTGTGAATTGTGATTA+AGG | - | chr7.3:81585855-81585874 | None:intergenic | 35.0% |
| ! | CCTTAGCCTAATTTAAGGTT+CGG | - | chr7.3:81588229-81588248 | None:intergenic | 35.0% |
| ! | GAAAGTGTGAAATTGTTCGT+AGG | + | chr7.3:81584109-81584128 | MS.gene25647:CDS | 35.0% |
| ! | GACACAATTGTTGTTACTGT+GGG | + | chr7.3:81585096-81585115 | MS.gene25647:intron | 35.0% |
| ! | GAGGGAAAATAATTTGTGCT+TGG | - | chr7.3:81586963-81586982 | None:intergenic | 35.0% |
| ! | GCACAAATTATTTTCCCTCT+TGG | + | chr7.3:81586964-81586983 | MS.gene25647:intron | 35.0% |
| ! | GTGTTAACGGACATAACTTA+GGG | - | chr7.3:81588040-81588059 | None:intergenic | 35.0% |
| ! | GTTGAACCGCTTATTCTTTT+TGG | + | chr7.3:81586162-81586181 | MS.gene25647:intron | 35.0% |
| ! | GTTTTTGTTGACAAAGCTAC+CGG | + | chr7.3:81588433-81588452 | MS.gene25647:CDS | 35.0% |
| ! | TCAATAGTATCCGGCTTTTT+AGG | - | chr7.3:81585321-81585340 | None:intergenic | 35.0% |
| ! | TGACACAATTGTTGTTACTG+TGG | + | chr7.3:81585095-81585114 | MS.gene25647:intron | 35.0% |
| ! | TGATTTTCCCTTTCCAAACT+TGG | - | chr7.3:81586722-81586741 | None:intergenic | 35.0% |
| ! | TGTGTTAACGGACATAACTT+AGG | - | chr7.3:81588041-81588060 | None:intergenic | 35.0% |
| ! | TGTTAACGGACATAACTTAG+GGG | - | chr7.3:81588039-81588058 | None:intergenic | 35.0% |
| ! | TGTTTAGAACACTGAAGTGT+TGG | + | chr7.3:81585371-81585390 | MS.gene25647:intron | 35.0% |
| !! | TGTATCGTGTTAGTTCTACT+AGG | + | chr7.3:81584853-81584872 | MS.gene25647:intron | 35.0% |
| !!! | TAGGTTTCCATTTTGAGACA+GGG | - | chr7.3:81586601-81586620 | None:intergenic | 35.0% |
| !!! | TTAGGTTTCCATTTTGAGAC+AGG | - | chr7.3:81586602-81586621 | None:intergenic | 35.0% |
| !!! | TTTCATTTTTGGTAGTAGCC+AGG | + | chr7.3:81586036-81586055 | MS.gene25647:intron | 35.0% |
| AAAATTACTAAACGCACCCC+CGG | - | chr7.3:81584434-81584453 | None:intergenic | 40.0% | |
| ACAAACGCAACTTATCATGC+AGG | - | chr7.3:81585267-81585286 | None:intergenic | 40.0% | |
| ACAGTCTCAAGCTTCTAATG+TGG | + | chr7.3:81587258-81587277 | MS.gene25647:CDS | 40.0% | |
| AGAAAATGGACGGGGTTAAA+TGG | + | chr7.3:81584805-81584824 | MS.gene25647:intron | 40.0% | |
| AGTTGAAACCCTGACTAAGA+TGG | + | chr7.3:81586346-81586365 | MS.gene25647:intron | 40.0% | |
| ATCAGCCCATTTGACAACTA+AGG | - | chr7.3:81587200-81587219 | None:intergenic | 40.0% | |
| ATGATGCCTCACATGAATCA+AGG | + | chr7.3:81587616-81587635 | MS.gene25647:CDS | 40.0% | |
| ATGCACAACCTACTACAACA+TGG | - | chr7.3:81585895-81585914 | None:intergenic | 40.0% | |
| CAGTATATTGGACCTTCAAG+CGG | + | chr7.3:81586481-81586500 | MS.gene25647:intron | 40.0% | |
| CAGTCTCAAGCTTCTAATGT+GGG | + | chr7.3:81587259-81587278 | MS.gene25647:CDS | 40.0% | |
| CCGAACCTTAAATTAGGCTA+AGG | + | chr7.3:81588226-81588245 | MS.gene25647:intron | 40.0% | |
| GAATTGTGGTCTGGAAAACA+CGG | + | chr7.3:81585072-81585091 | MS.gene25647:intron | 40.0% | |
| GCACTCAAAACTCTACCAAA+TGG | - | chr7.3:81588409-81588428 | None:intergenic | 40.0% | |
| GCATTTCCTTGATTCATGTG+AGG | - | chr7.3:81587625-81587644 | None:intergenic | 40.0% | |
| GCTAATGCCTTTCAACCATT+TGG | + | chr7.3:81588391-81588410 | MS.gene25647:CDS | 40.0% | |
| GGTTCTCAACAGACAAGTAA+AGG | + | chr7.3:81585778-81585797 | MS.gene25647:CDS | 40.0% | |
| GTCCTATACAAGCCATTGTA+GGG | - | chr7.3:81586638-81586657 | None:intergenic | 40.0% | |
| GTGAAACACTAGGGTATATG+GGG | - | chr7.3:81584701-81584720 | None:intergenic | 40.0% | |
| GTGTTCCCTTAGTTGTCAAA+TGG | + | chr7.3:81587191-81587210 | MS.gene25647:CDS | 40.0% | |
| GTTCCTCCATATAACGGTTA+TGG | + | chr7.3:81587331-81587350 | MS.gene25647:CDS | 40.0% | |
| GTTCCTTGTATGTGGTAGAA+TGG | + | chr7.3:81586406-81586425 | MS.gene25647:intron | 40.0% | |
| TAGATAAACAGATTTGCGCC+AGG | - | chr7.3:81588337-81588356 | None:intergenic | 40.0% | |
| TAGCCATAACCGTTATATGG+AGG | - | chr7.3:81587337-81587356 | None:intergenic | 40.0% | |
| TATGGAGGAACATAACCCAT+AGG | - | chr7.3:81587322-81587341 | None:intergenic | 40.0% | |
| TCAGCCCATTTGACAACTAA+GGG | - | chr7.3:81587199-81587218 | None:intergenic | 40.0% | |
| TCATCTTCCGTCATGTGTTT+CGG | - | chr7.3:81584142-81584161 | None:intergenic | 40.0% | |
| TCTCCATTCTACCACATACA+AGG | - | chr7.3:81586412-81586431 | None:intergenic | 40.0% | |
| TCTGCATACTTCACTTGCAA+TGG | - | chr7.3:81585495-81585514 | None:intergenic | 40.0% | |
| TGAAACACTAGGGTATATGG+GGG | - | chr7.3:81584700-81584719 | None:intergenic | 40.0% | |
| TGGTCCCTTAGCCTAATTTA+AGG | - | chr7.3:81588234-81588253 | None:intergenic | 40.0% | |
| TGTCCTATACAAGCCATTGT+AGG | - | chr7.3:81586639-81586658 | None:intergenic | 40.0% | |
| TTGAATGGACGACAGTACTA+TGG | - | chr7.3:81587431-81587450 | None:intergenic | 40.0% | |
| TTGACTGAAACAGTGCACAA+AGG | - | chr7.3:81586837-81586856 | None:intergenic | 40.0% | |
| TTGCAAGTGAAGTATGCAGA+TGG | + | chr7.3:81585495-81585514 | MS.gene25647:CDS | 40.0% | |
| ! | ATTATTTGGAGCCATGCCTA+TGG | + | chr7.3:81587303-81587322 | MS.gene25647:CDS | 40.0% |
| ! | ATTTTCTCTTGATAGGCTCC+TGG | + | chr7.3:81587529-81587548 | MS.gene25647:intron | 40.0% |
| ! | CAATGGAAAGCACAAAATGG+AGG | + | chr7.3:81585964-81585983 | MS.gene25647:CDS | 40.0% |
| ! | CAGTGTTCTAAACAAAGCCT+TGG | - | chr7.3:81585365-81585384 | None:intergenic | 40.0% |
| ! | GCCTAATTTAAGGTTCGGTT+TGG | - | chr7.3:81588224-81588243 | None:intergenic | 40.0% |
| ! | TAAGAGCCAACATAACTTGC+AGG | - | chr7.3:81587700-81587719 | None:intergenic | 40.0% |
| ! | TAAGTTTAGTGGCGGAATTG+TGG | + | chr7.3:81585058-81585077 | MS.gene25647:intron | 40.0% |
| ! | TATTTTCACTTAGGACCACC+TGG | + | chr7.3:81588316-81588335 | MS.gene25647:intron | 40.0% |
| ! | TCATGTGAGGCATCATATTG+TGG | - | chr7.3:81587612-81587631 | None:intergenic | 40.0% |
| ! | TCTGCACTTTTCTCCAAGTA+TGG | + | chr7.3:81585727-81585746 | MS.gene25647:CDS | 40.0% |
| ! | TTATTTGGAGCCATGCCTAT+GGG | + | chr7.3:81587304-81587323 | MS.gene25647:CDS | 40.0% |
| ! | TTCCCTACAATGGCTTGTAT+AGG | + | chr7.3:81586633-81586652 | MS.gene25647:intron | 40.0% |
| ! | TTCTAGAGATGAAGCCGATA+AGG | + | chr7.3:81584376-81584395 | MS.gene25647:CDS | 40.0% |
| !! | CAAATGGGCTGATACTGAAA+AGG | + | chr7.3:81587207-81587226 | MS.gene25647:CDS | 40.0% |
| !! | TAACCAGGTTGATTCTGCAT+TGG | - | chr7.3:81587589-81587608 | None:intergenic | 40.0% |
| !! | TCAAGTACCGAAACACATGA+CGG | + | chr7.3:81584132-81584151 | MS.gene25647:CDS | 40.0% |
| !! | TGAAGACTAGTTTGCCAAGA+GGG | - | chr7.3:81586981-81587000 | None:intergenic | 40.0% |
| !! | TTATCGGCTTCATCTCTAGA+AGG | - | chr7.3:81584377-81584396 | None:intergenic | 40.0% |
| !!! | TGCTTTTGGTTCCTTGTATG+TGG | + | chr7.3:81586398-81586417 | MS.gene25647:intron | 40.0% |
| AAAATGGAGCGTGGCCTATA+TGG | - | chr7.3:81585228-81585247 | None:intergenic | 45.0% | |
| AACGGTGTTTGTGCCAGTTT+AGG | - | chr7.3:81588154-81588173 | None:intergenic | 45.0% | |
| ACGGTGTTTGTGCCAGTTTA+GGG | - | chr7.3:81588153-81588172 | None:intergenic | 45.0% | |
| ACTGTGCTTTCTGAGCTCTT+CGG | - | chr7.3:81587243-81587262 | None:intergenic | 45.0% | |
| AGACCTTTGAATAGTCCTCC+TGG | + | chr7.3:81587778-81587797 | MS.gene25647:CDS | 45.0% | |
| AGGAACATAACCCATAGGCA+TGG | - | chr7.3:81587317-81587336 | None:intergenic | 45.0% | |
| ATAAACAGATTTGCGCCAGG+TGG | - | chr7.3:81588334-81588353 | None:intergenic | 45.0% | |
| ATTCCTCCAGGATATGCCAT+TGG | - | chr7.3:81587748-81587767 | None:intergenic | 45.0% | |
| CAACATCCAATGGCATATCC+TGG | + | chr7.3:81587739-81587758 | MS.gene25647:CDS | 45.0% | |
| CCTGACTAAGATGGCATGAA+CGG | + | chr7.3:81586355-81586374 | MS.gene25647:intron | 45.0% | |
| CGTTCATGCCATCTTAGTCA+GGG | - | chr7.3:81586357-81586376 | None:intergenic | 45.0% | |
| CTTGGACTAATCATTCCTCC+AGG | - | chr7.3:81587760-81587779 | None:intergenic | 45.0% | |
| GAACCAGGAGGACTATTCAA+AGG | - | chr7.3:81587784-81587803 | None:intergenic | 45.0% | |
| GATAGGCTCCTGGAAGTTAT+GGG | + | chr7.3:81587539-81587558 | MS.gene25647:intron | 45.0% | |
| GCACAAAGGTTTGTGTGCAT+GGG | - | chr7.3:81586823-81586842 | None:intergenic | 45.0% | |
| GCTCGAACTTGATCCAAGTT+TGG | + | chr7.3:81586706-81586725 | MS.gene25647:intron | 45.0% | |
| GGAAAGGGAAAATCAAGCTC+TGG | + | chr7.3:81586727-81586746 | MS.gene25647:intron | 45.0% | |
| GGAGGACTATTCAAAGGTCT+TGG | - | chr7.3:81587778-81587797 | None:intergenic | 45.0% | |
| GGCATCATATTGTGGTAACC+AGG | - | chr7.3:81587604-81587623 | None:intergenic | 45.0% | |
| GGCATGGCTCCAAATAATGA+AGG | - | chr7.3:81587301-81587320 | None:intergenic | 45.0% | |
| TAACTGGCAGGTGTCCATAT+AGG | + | chr7.3:81585211-81585230 | MS.gene25647:intron | 45.0% | |
| TAGGACATTGTTCCACACCT+AGG | + | chr7.3:81586652-81586671 | MS.gene25647:intron | 45.0% | |
| TAGGGAACAAACCCACCATT+AGG | - | chr7.3:81586620-81586639 | None:intergenic | 45.0% | |
| TCAGGGTCCAGCAAAAATTC+TGG | + | chr7.3:81587844-81587863 | MS.gene25647:CDS | 45.0% | |
| TCCAGCAAAAATTCTGGTGG+TGG | + | chr7.3:81587850-81587869 | MS.gene25647:CDS | 45.0% | |
| TGATAGGCTCCTGGAAGTTA+TGG | + | chr7.3:81587538-81587557 | MS.gene25647:intron | 45.0% | |
| TGCACAAAGGTTTGTGTGCA+TGG | - | chr7.3:81586824-81586843 | None:intergenic | 45.0% | |
| TGTCTTGTGTTTGCATGACC+TGG | + | chr7.3:81587048-81587067 | MS.gene25647:intron | 45.0% | |
| ! | ACACGCATTAACGGCCTTAT+CGG | - | chr7.3:81584393-81584412 | None:intergenic | 45.0% |
| ! | ACCACCACCAGAATTTTTGC+TGG | - | chr7.3:81587854-81587873 | None:intergenic | 45.0% |
| ! | AGAACAAGCTCTTGCTGCTT+TGG | + | chr7.3:81585934-81585953 | MS.gene25647:CDS | 45.0% |
| ! | AGCAGCAAGAGCTTGTTCTT+TGG | - | chr7.3:81585933-81585952 | None:intergenic | 45.0% |
| ! | GATGGCGAGTTGGAAAGATT+AGG | + | chr7.3:81585513-81585532 | MS.gene25647:CDS | 45.0% |
| ! | GGAAAGCACAAAATGGAGGT+TGG | + | chr7.3:81585968-81585987 | MS.gene25647:intron | 45.0% |
| ! | GGAGGCACATGATAGTTTCT+AGG | - | chr7.3:81587679-81587698 | None:intergenic | 45.0% |
| ! | TAACGGGTAAAACCTAGGTG+TGG | - | chr7.3:81586667-81586686 | None:intergenic | 45.0% |
| !! | CGTGTTAGTTCTACTAGGCT+GGG | + | chr7.3:81584858-81584877 | MS.gene25647:intron | 45.0% |
| !! | GCTGTTAACTAGTGCTGATG+TGG | + | chr7.3:81588090-81588109 | MS.gene25647:intron | 45.0% |
| !! | GTGAAGACTAGTTTGCCAAG+AGG | - | chr7.3:81586982-81587001 | None:intergenic | 45.0% |
| !! | TCGTGTTAGTTCTACTAGGC+TGG | + | chr7.3:81584857-81584876 | MS.gene25647:intron | 45.0% |
| AATGCATTGCGGCCAGATCT+CGG | + | chr7.3:81587640-81587659 | MS.gene25647:CDS | 50.0% | |
| ATAGAAGGCAAGTGGGCAAC+AGG | + | chr7.3:81586140-81586159 | MS.gene25647:intron | 50.0% | |
| CATCCAATGGCATATCCTGG+AGG | + | chr7.3:81587742-81587761 | MS.gene25647:CDS | 50.0% | |
| CCACCAATGCAGAATCAACC+TGG | + | chr7.3:81587583-81587602 | MS.gene25647:CDS | 50.0% | |
| CCGTTCATGCCATCTTAGTC+AGG | - | chr7.3:81586358-81586377 | None:intergenic | 50.0% | |
| CTGTGCTTTCTGAGCTCTTC+GGG | - | chr7.3:81587242-81587261 | None:intergenic | 50.0% | |
| GAAGGTGAAACAGAACCAGG+AGG | - | chr7.3:81587796-81587815 | None:intergenic | 50.0% | |
| GAAGTATGCAGATGGCGAGT+TGG | + | chr7.3:81585503-81585522 | MS.gene25647:CDS | 50.0% | |
| GCAACTCCGCTACATCATCA+GGG | + | chr7.3:81587827-81587846 | MS.gene25647:CDS | 50.0% | |
| GCCAGGGTTACAACATCCAA+TGG | + | chr7.3:81587729-81587748 | MS.gene25647:CDS | 50.0% | |
| GCCATTGGATGTTGTAACCC+TGG | - | chr7.3:81587733-81587752 | None:intergenic | 50.0% | |
| GGGTCCAGCAAAAATTCTGG+TGG | + | chr7.3:81587847-81587866 | MS.gene25647:CDS | 50.0% | |
| GTGCCTCCTGCAAGTTATGT+TGG | + | chr7.3:81587691-81587710 | MS.gene25647:CDS | 50.0% | |
| GTTTCACCTTCCGGTGGAAA+TGG | + | chr7.3:81587805-81587824 | MS.gene25647:CDS | 50.0% | |
| TTCATATTGGGGCCGAGATC+TGG | - | chr7.3:81587655-81587674 | None:intergenic | 50.0% | |
| ! | GAGCCAACATAACTTGCAGG+AGG | - | chr7.3:81587697-81587716 | None:intergenic | 50.0% |
| ! | GGTGGGTTTGTTCCCTACAA+TGG | + | chr7.3:81586623-81586642 | MS.gene25647:intron | 50.0% |
| ! | GGTTGATTCTGCATTGGTGG+CGG | - | chr7.3:81587583-81587602 | None:intergenic | 50.0% |
| ! | TGTGACTGAATGCCGCTTGA+AGG | - | chr7.3:81586496-81586515 | None:intergenic | 50.0% |
| ! | TTAGTGGCGGAATTGTGGTC+TGG | + | chr7.3:81585063-81585082 | MS.gene25647:intron | 50.0% |
| !! | ACAAGCTCTTGCTGCTTTGG+AGG | + | chr7.3:81585937-81585956 | MS.gene25647:CDS | 50.0% |
| !! | CCAGGTTGATTCTGCATTGG+TGG | - | chr7.3:81587586-81587605 | None:intergenic | 50.0% |
| !! | CCTGGTTCTGTTTCACCTTC+CGG | + | chr7.3:81587796-81587815 | MS.gene25647:CDS | 50.0% |
| !! | GCTGCTTTGGAGGCAATCAA+TGG | + | chr7.3:81585947-81585966 | MS.gene25647:CDS | 50.0% |
| AAAGCTACACGCGCTTCTCG+AGG | + | chr7.3:81584220-81584239 | MS.gene25647:CDS | 55.0% | |
| CCGGAAGGTGAAACAGAACC+AGG | - | chr7.3:81587799-81587818 | None:intergenic | 55.0% | |
| GCTCTTATCCTGCTGTGCCA+GGG | + | chr7.3:81587713-81587732 | MS.gene25647:CDS | 55.0% | |
| GGCAACTCCGCTACATCATC+AGG | + | chr7.3:81587826-81587845 | MS.gene25647:CDS | 55.0% | |
| GGCATGAGCCCATAACTTCC+AGG | - | chr7.3:81587550-81587569 | None:intergenic | 55.0% | |
| GGTTCTGTTTCACCTTCCGG+TGG | + | chr7.3:81587799-81587818 | MS.gene25647:CDS | 55.0% | |
| TGTTGTAACCCTGGCACAGC+AGG | - | chr7.3:81587724-81587743 | None:intergenic | 55.0% | |
| ! | AGCGGAGTTGCCATTTCCAC+CGG | - | chr7.3:81587818-81587837 | None:intergenic | 55.0% |
| ! | GAGTTGCCATTTCCACCGGA+AGG | - | chr7.3:81587814-81587833 | None:intergenic | 55.0% |
| ! | GCTGGACCCTGATGATGTAG+CGG | - | chr7.3:81587836-81587855 | None:intergenic | 55.0% |
| !! | TCTGGTGGTGGTCAAGCTGA+AGG | + | chr7.3:81587862-81587881 | MS.gene25647:CDS | 55.0% |
| GGCTCTTATCCTGCTGTGCC+AGG | + | chr7.3:81587712-81587731 | MS.gene25647:CDS | 60.0% | |
| !! | ATTGGTGGCGGCATGCGGTA+CGG | - | chr7.3:81587571-81587590 | None:intergenic | 60.0% |
| !! | TCTGCATTGGTGGCGGCATG+CGG | - | chr7.3:81587576-81587595 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 81584070 | 81588472 | 81584070 | ID=MS.gene25647 |
| chr7.3 | mRNA | 81584070 | 81588472 | 81584070 | ID=MS.gene25647.t1;Parent=MS.gene25647 |
| chr7.3 | exon | 81584070 | 81584241 | 81584070 | ID=MS.gene25647.t1.exon1;Parent=MS.gene25647.t1 |
| chr7.3 | CDS | 81584070 | 81584241 | 81584070 | ID=cds.MS.gene25647.t1;Parent=MS.gene25647.t1 |
| chr7.3 | exon | 81584354 | 81584436 | 81584354 | ID=MS.gene25647.t1.exon2;Parent=MS.gene25647.t1 |
| chr7.3 | CDS | 81584354 | 81584436 | 81584354 | ID=cds.MS.gene25647.t1;Parent=MS.gene25647.t1 |
| chr7.3 | exon | 81585483 | 81585534 | 81585483 | ID=MS.gene25647.t1.exon3;Parent=MS.gene25647.t1 |
| chr7.3 | CDS | 81585483 | 81585534 | 81585483 | ID=cds.MS.gene25647.t1;Parent=MS.gene25647.t1 |
| chr7.3 | exon | 81585674 | 81585799 | 81585674 | ID=MS.gene25647.t1.exon4;Parent=MS.gene25647.t1 |
| chr7.3 | CDS | 81585674 | 81585799 | 81585674 | ID=cds.MS.gene25647.t1;Parent=MS.gene25647.t1 |
| chr7.3 | exon | 81585903 | 81585985 | 81585903 | ID=MS.gene25647.t1.exon5;Parent=MS.gene25647.t1 |
| chr7.3 | CDS | 81585903 | 81585985 | 81585903 | ID=cds.MS.gene25647.t1;Parent=MS.gene25647.t1 |
| chr7.3 | exon | 81587184 | 81587360 | 81587184 | ID=MS.gene25647.t1.exon6;Parent=MS.gene25647.t1 |
| chr7.3 | CDS | 81587184 | 81587360 | 81587184 | ID=cds.MS.gene25647.t1;Parent=MS.gene25647.t1 |
| chr7.3 | exon | 81587544 | 81587883 | 81587544 | ID=MS.gene25647.t1.exon7;Parent=MS.gene25647.t1 |
| chr7.3 | CDS | 81587544 | 81587883 | 81587544 | ID=cds.MS.gene25647.t1;Parent=MS.gene25647.t1 |
| chr7.3 | exon | 81588329 | 81588472 | 81588329 | ID=MS.gene25647.t1.exon8;Parent=MS.gene25647.t1 |
| chr7.3 | CDS | 81588329 | 81588472 | 81588329 | ID=cds.MS.gene25647.t1;Parent=MS.gene25647.t1 |
| Gene Sequence |
| Protein sequence |
