Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26296.t1 | XP_003615979.1 | 98.1 | 323 | 6 | 0 | 1 | 323 | 1 | 323 | 3.80E-183 | 650.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26296.t1 | P22195 | 57.5 | 320 | 126 | 5 | 3 | 321 | 6 | 316 | 4.0e-96 | 352.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26296.t1 | G7KFK6 | 98.1 | 323 | 6 | 0 | 1 | 323 | 1 | 323 | 2.8e-183 | 650.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene26296 | 0.830768 | 2.44E-55 | -1.69E-46 |
| MS.gene050096 | MS.gene26296 | 0.820829 | 5.58E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene26296 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene26296 | 0.809775 | 1.60E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene26296 | 0.822874 | 1.88E-53 | -1.69E-46 |
| MS.gene053031 | MS.gene26296 | 0.803666 | 3.13E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene26296 | 0.827801 | 1.28E-54 | -1.69E-46 |
| MS.gene054277 | MS.gene26296 | 0.832283 | 1.03E-55 | -1.69E-46 |
| MS.gene054742 | MS.gene26296 | 0.829902 | 3.97E-55 | -1.69E-46 |
| MS.gene05483 | MS.gene26296 | 0.827878 | 1.23E-54 | -1.69E-46 |
| MS.gene055240 | MS.gene26296 | 0.813604 | 2.35E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene26296 | 0.809351 | 1.98E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene26296 | 0.808221 | 3.44E-50 | -1.69E-46 |
| MS.gene056680 | MS.gene26296 | 0.807378 | 5.20E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene26296 | 0.860812 | 1.59E-63 | -1.69E-46 |
| MS.gene056922 | MS.gene26296 | 0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene057544 | MS.gene26296 | 0.807101 | 5.96E-50 | -1.69E-46 |
| MS.gene058381 | MS.gene26296 | 0.800374 | 1.48E-48 | -1.69E-46 |
| MS.gene059955 | MS.gene26296 | 0.802545 | 5.33E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene26296 | 0.8386 | 2.61E-57 | -1.69E-46 |
| MS.gene060095 | MS.gene26296 | 0.835365 | 1.75E-56 | -1.69E-46 |
| MS.gene061038 | MS.gene26296 | 0.808593 | 2.87E-50 | -1.69E-46 |
| MS.gene061092 | MS.gene26296 | 0.803519 | 3.35E-49 | -1.69E-46 |
| MS.gene061094 | MS.gene26296 | 0.800819 | 1.20E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26296.t1 | MTR_5g074740 | 98.142 | 323 | 6 | 0 | 1 | 323 | 1 | 323 | 0.0 | 657 |
| MS.gene26296.t1 | MTR_5g074760 | 95.652 | 322 | 14 | 0 | 1 | 322 | 1 | 322 | 0.0 | 643 |
| MS.gene26296.t1 | MTR_5g074710 | 88.235 | 323 | 38 | 0 | 1 | 323 | 1 | 323 | 0.0 | 603 |
| MS.gene26296.t1 | MTR_5g074860 | 71.293 | 317 | 91 | 0 | 4 | 320 | 8 | 324 | 1.63e-171 | 479 |
| MS.gene26296.t1 | MTR_3g467600 | 64.375 | 320 | 112 | 2 | 4 | 321 | 5 | 324 | 6.08e-146 | 414 |
| MS.gene26296.t1 | MTR_5g074700 | 88.053 | 226 | 13 | 1 | 98 | 323 | 5 | 216 | 2.40e-144 | 405 |
| MS.gene26296.t1 | MTR_5g074860 | 62.145 | 317 | 81 | 1 | 4 | 320 | 8 | 285 | 4.04e-140 | 398 |
| MS.gene26296.t1 | MTR_4g029170 | 60.615 | 325 | 120 | 5 | 1 | 321 | 1 | 321 | 1.23e-134 | 385 |
| MS.gene26296.t1 | MTR_4g029180 | 64.189 | 296 | 100 | 4 | 28 | 321 | 30 | 321 | 3.39e-129 | 371 |
| MS.gene26296.t1 | MTR_5g074970 | 56.563 | 320 | 126 | 8 | 7 | 321 | 15 | 326 | 5.07e-120 | 348 |
| MS.gene26296.t1 | MTR_3g466200 | 54.688 | 320 | 135 | 8 | 6 | 321 | 7 | 320 | 2.95e-117 | 341 |
| MS.gene26296.t1 | MTR_3g094650 | 54.969 | 322 | 136 | 6 | 3 | 321 | 7 | 322 | 2.43e-115 | 336 |
| MS.gene26296.t1 | MTR_5g083860 | 54.630 | 324 | 138 | 6 | 1 | 321 | 8 | 325 | 4.06e-115 | 336 |
| MS.gene26296.t1 | MTR_2g084080 | 53.416 | 322 | 144 | 5 | 1 | 321 | 1 | 317 | 1.20e-114 | 334 |
| MS.gene26296.t1 | MTR_3g072190 | 54.717 | 318 | 136 | 5 | 7 | 321 | 6 | 318 | 2.85e-114 | 333 |
| MS.gene26296.t1 | MTR_2g084020 | 55.063 | 316 | 135 | 5 | 9 | 321 | 7 | 318 | 5.48e-114 | 333 |
| MS.gene26296.t1 | MTR_4g029200 | 54.575 | 306 | 133 | 4 | 17 | 321 | 38 | 338 | 6.55e-114 | 333 |
| MS.gene26296.t1 | MTR_2g084010 | 56.291 | 302 | 127 | 4 | 21 | 321 | 21 | 318 | 3.90e-113 | 330 |
| MS.gene26296.t1 | MTR_2g084000 | 52.941 | 323 | 146 | 5 | 1 | 321 | 1 | 319 | 1.96e-112 | 329 |
| MS.gene26296.t1 | MTR_2g084110 | 54.747 | 316 | 135 | 6 | 9 | 321 | 7 | 317 | 2.18e-111 | 326 |
| MS.gene26296.t1 | MTR_1g115900 | 53.459 | 318 | 139 | 7 | 7 | 321 | 10 | 321 | 6.69e-111 | 325 |
| MS.gene26296.t1 | MTR_7g072480 | 53.727 | 322 | 142 | 5 | 1 | 321 | 1 | 316 | 2.02e-110 | 323 |
| MS.gene26296.t1 | MTR_7g072510 | 52.396 | 313 | 140 | 5 | 10 | 321 | 8 | 312 | 1.19e-109 | 322 |
| MS.gene26296.t1 | MTR_3g094670 | 55.000 | 320 | 132 | 6 | 5 | 321 | 12 | 322 | 5.69e-109 | 320 |
| MS.gene26296.t1 | MTR_2g084090 | 53.548 | 310 | 137 | 6 | 14 | 321 | 14 | 318 | 2.47e-108 | 318 |
| MS.gene26296.t1 | MTR_3g094630 | 54.658 | 322 | 137 | 6 | 3 | 321 | 7 | 322 | 3.92e-108 | 318 |
| MS.gene26296.t1 | MTR_4g083710 | 50.313 | 320 | 150 | 6 | 7 | 321 | 9 | 324 | 2.09e-105 | 311 |
| MS.gene26296.t1 | MTR_3g466180 | 52.866 | 314 | 142 | 4 | 9 | 321 | 15 | 323 | 1.78e-104 | 309 |
| MS.gene26296.t1 | MTR_4g029190 | 51.815 | 303 | 137 | 6 | 23 | 321 | 43 | 340 | 2.32e-104 | 309 |
| MS.gene26296.t1 | MTR_7g026990 | 49.367 | 316 | 154 | 6 | 7 | 321 | 12 | 322 | 1.48e-103 | 306 |
| MS.gene26296.t1 | MTR_5g021060 | 52.131 | 305 | 134 | 5 | 25 | 321 | 30 | 330 | 1.53e-102 | 304 |
| MS.gene26296.t1 | MTR_8g076820 | 51.148 | 305 | 137 | 5 | 25 | 321 | 30 | 330 | 6.74e-100 | 297 |
| MS.gene26296.t1 | MTR_4g074995 | 48.896 | 317 | 140 | 7 | 10 | 321 | 9 | 308 | 2.60e-97 | 290 |
| MS.gene26296.t1 | MTR_2g028980 | 48.903 | 319 | 152 | 5 | 12 | 322 | 16 | 331 | 9.71e-96 | 288 |
| MS.gene26296.t1 | MTR_7g093370 | 45.988 | 324 | 163 | 5 | 7 | 321 | 51 | 371 | 2.78e-95 | 287 |
| MS.gene26296.t1 | MTR_2g029560 | 46.749 | 323 | 160 | 6 | 8 | 321 | 6 | 325 | 9.40e-95 | 285 |
| MS.gene26296.t1 | MTR_2g029800 | 49.837 | 307 | 143 | 5 | 23 | 321 | 27 | 330 | 1.85e-93 | 281 |
| MS.gene26296.t1 | MTR_1g054205 | 44.242 | 330 | 170 | 6 | 1 | 321 | 2 | 326 | 8.39e-93 | 279 |
| MS.gene26296.t1 | MTR_4g125940 | 50.000 | 310 | 140 | 6 | 23 | 322 | 26 | 330 | 9.44e-93 | 279 |
| MS.gene26296.t1 | MTR_1g022970 | 47.869 | 305 | 148 | 4 | 25 | 321 | 46 | 347 | 9.70e-93 | 280 |
| MS.gene26296.t1 | MTR_5g017850 | 49.383 | 324 | 147 | 10 | 9 | 321 | 9 | 326 | 6.35e-91 | 274 |
| MS.gene26296.t1 | MTR_2g040000 | 47.170 | 318 | 152 | 7 | 16 | 322 | 20 | 332 | 1.43e-90 | 273 |
| MS.gene26296.t1 | MTR_3g072190 | 54.902 | 255 | 109 | 4 | 68 | 321 | 2 | 251 | 3.42e-90 | 270 |
| MS.gene26296.t1 | MTR_2g029815 | 44.923 | 325 | 168 | 4 | 5 | 321 | 9 | 330 | 1.07e-89 | 272 |
| MS.gene26296.t1 | MTR_5g017860 | 48.148 | 324 | 151 | 10 | 9 | 321 | 9 | 326 | 9.71e-89 | 269 |
| MS.gene26296.t1 | MTR_4g074990 | 45.483 | 321 | 147 | 7 | 6 | 321 | 8 | 305 | 1.27e-88 | 268 |
| MS.gene26296.t1 | MTR_2g029830 | 46.580 | 307 | 153 | 4 | 23 | 321 | 26 | 329 | 3.08e-88 | 268 |
| MS.gene26296.t1 | MTR_2g029730 | 46.012 | 326 | 164 | 6 | 5 | 321 | 4 | 326 | 4.62e-88 | 268 |
| MS.gene26296.t1 | MTR_2g029820 | 44.923 | 325 | 168 | 4 | 5 | 321 | 9 | 330 | 5.29e-88 | 268 |
| MS.gene26296.t1 | MTR_4g031140 | 44.479 | 326 | 167 | 5 | 3 | 321 | 6 | 324 | 1.61e-87 | 266 |
| MS.gene26296.t1 | MTR_2g029860 | 45.603 | 307 | 156 | 4 | 23 | 321 | 27 | 330 | 3.62e-87 | 266 |
| MS.gene26296.t1 | MTR_2g029740 | 44.688 | 320 | 166 | 4 | 11 | 322 | 15 | 331 | 4.73e-87 | 265 |
| MS.gene26296.t1 | MTR_4g122640 | 45.928 | 307 | 156 | 5 | 21 | 321 | 34 | 336 | 1.16e-86 | 264 |
| MS.gene26296.t1 | MTR_5g049280 | 45.706 | 326 | 163 | 8 | 7 | 321 | 15 | 337 | 1.77e-86 | 263 |
| MS.gene26296.t1 | MTR_4g030890 | 46.302 | 311 | 153 | 5 | 18 | 321 | 93 | 396 | 2.02e-86 | 266 |
| MS.gene26296.t1 | MTR_4g125940 | 52.330 | 279 | 118 | 6 | 54 | 322 | 2 | 275 | 5.65e-86 | 260 |
| MS.gene26296.t1 | MTR_5g014100 | 47.097 | 310 | 147 | 6 | 25 | 321 | 26 | 331 | 2.44e-85 | 260 |
| MS.gene26296.t1 | MTR_2g029750 | 45.000 | 320 | 165 | 5 | 11 | 322 | 15 | 331 | 8.80e-85 | 259 |
| MS.gene26296.t1 | MTR_2g029910 | 45.161 | 310 | 158 | 5 | 23 | 323 | 28 | 334 | 8.35e-83 | 254 |
| MS.gene26296.t1 | MTR_4g074980 | 44.795 | 317 | 144 | 8 | 6 | 321 | 8 | 294 | 4.46e-82 | 251 |
| MS.gene26296.t1 | MTR_2g029850 | 44.625 | 307 | 159 | 4 | 23 | 321 | 27 | 330 | 1.43e-81 | 251 |
| MS.gene26296.t1 | MTR_1g077000 | 42.722 | 316 | 171 | 7 | 7 | 321 | 21 | 327 | 1.31e-80 | 248 |
| MS.gene26296.t1 | MTR_1g101830 | 44.615 | 325 | 158 | 11 | 5 | 321 | 12 | 322 | 5.25e-80 | 246 |
| MS.gene26296.t1 | MTR_3g092990 | 40.061 | 327 | 182 | 6 | 4 | 321 | 5 | 326 | 2.76e-76 | 237 |
| MS.gene26296.t1 | MTR_0155s0040 | 42.000 | 300 | 164 | 8 | 23 | 321 | 25 | 315 | 6.82e-75 | 233 |
| MS.gene26296.t1 | MTR_1g086490 | 40.120 | 334 | 179 | 6 | 7 | 323 | 13 | 342 | 6.64e-74 | 231 |
| MS.gene26296.t1 | MTR_4g074980 | 48.207 | 251 | 120 | 6 | 6 | 251 | 8 | 253 | 4.16e-73 | 226 |
| MS.gene26296.t1 | MTR_1g086320 | 39.571 | 326 | 181 | 6 | 7 | 321 | 13 | 333 | 4.62e-73 | 229 |
| MS.gene26296.t1 | MTR_4g046713 | 39.697 | 330 | 184 | 8 | 1 | 321 | 3 | 326 | 1.12e-72 | 228 |
| MS.gene26296.t1 | MTR_1g038680 | 40.789 | 304 | 165 | 7 | 29 | 321 | 33 | 332 | 6.82e-72 | 226 |
| MS.gene26296.t1 | MTR_2g088770 | 41.566 | 332 | 176 | 11 | 1 | 321 | 1 | 325 | 1.61e-71 | 224 |
| MS.gene26296.t1 | MTR_2g029830 | 47.104 | 259 | 126 | 4 | 71 | 321 | 6 | 261 | 5.82e-70 | 219 |
| MS.gene26296.t1 | MTR_1g025980 | 40.123 | 324 | 177 | 9 | 1 | 316 | 1 | 315 | 3.09e-68 | 216 |
| MS.gene26296.t1 | MTR_5g022870 | 39.210 | 329 | 179 | 9 | 1 | 321 | 1 | 316 | 1.75e-67 | 214 |
| MS.gene26296.t1 | MTR_6g027440 | 37.888 | 322 | 187 | 7 | 5 | 321 | 1 | 314 | 3.09e-66 | 211 |
| MS.gene26296.t1 | MTR_7g029030 | 40.557 | 323 | 180 | 8 | 4 | 321 | 5 | 320 | 4.58e-66 | 210 |
| MS.gene26296.t1 | MTR_7g107520 | 40.361 | 332 | 175 | 10 | 1 | 321 | 1 | 320 | 1.05e-65 | 209 |
| MS.gene26296.t1 | MTR_2g008710 | 41.639 | 305 | 156 | 9 | 29 | 321 | 31 | 325 | 1.55e-65 | 209 |
| MS.gene26296.t1 | MTR_8g075100 | 40.328 | 305 | 163 | 8 | 25 | 321 | 26 | 319 | 1.69e-65 | 209 |
| MS.gene26296.t1 | MTR_3g092990 | 37.920 | 327 | 178 | 7 | 4 | 321 | 5 | 315 | 8.71e-65 | 207 |
| MS.gene26296.t1 | MTR_1g090760 | 37.003 | 327 | 190 | 7 | 8 | 323 | 11 | 332 | 2.88e-61 | 199 |
| MS.gene26296.t1 | MTR_1g009750 | 38.138 | 333 | 183 | 10 | 3 | 321 | 5 | 328 | 3.09e-61 | 198 |
| MS.gene26296.t1 | MTR_4g133800 | 39.474 | 304 | 162 | 11 | 29 | 323 | 45 | 335 | 4.60e-61 | 198 |
| MS.gene26296.t1 | MTR_7g086820 | 37.582 | 306 | 175 | 8 | 23 | 322 | 18 | 313 | 2.19e-60 | 196 |
| MS.gene26296.t1 | MTR_4g087965 | 40.391 | 307 | 165 | 9 | 24 | 317 | 41 | 342 | 5.60e-60 | 196 |
| MS.gene26296.t1 | MTR_8g062780 | 38.658 | 313 | 177 | 6 | 21 | 323 | 19 | 326 | 5.65e-60 | 195 |
| MS.gene26296.t1 | MTR_5g016010 | 36.474 | 329 | 190 | 8 | 3 | 317 | 2 | 325 | 9.35e-59 | 192 |
| MS.gene26296.t1 | MTR_7g086870 | 37.458 | 299 | 176 | 8 | 25 | 321 | 22 | 311 | 1.19e-58 | 191 |
| MS.gene26296.t1 | MTR_2g437770 | 40.656 | 305 | 160 | 10 | 25 | 321 | 50 | 341 | 2.40e-58 | 191 |
| MS.gene26296.t1 | MTR_4g114210 | 38.272 | 324 | 174 | 10 | 14 | 321 | 7 | 320 | 3.83e-58 | 190 |
| MS.gene26296.t1 | MTR_4g127670 | 39.617 | 313 | 162 | 10 | 24 | 321 | 23 | 323 | 7.35e-58 | 189 |
| MS.gene26296.t1 | MTR_4g095450 | 37.460 | 315 | 184 | 7 | 10 | 317 | 12 | 320 | 4.71e-56 | 185 |
| MS.gene26296.t1 | MTR_3g072210 | 51.596 | 188 | 86 | 4 | 136 | 321 | 54 | 238 | 2.76e-55 | 180 |
| MS.gene26296.t1 | MTR_0286s0010 | 36.111 | 324 | 189 | 9 | 10 | 321 | 17 | 334 | 4.57e-55 | 182 |
| MS.gene26296.t1 | MTR_6g008075 | 36.111 | 324 | 189 | 9 | 10 | 321 | 17 | 334 | 4.57e-55 | 182 |
| MS.gene26296.t1 | MTR_2g099175 | 35.756 | 344 | 186 | 13 | 4 | 322 | 3 | 336 | 1.11e-54 | 181 |
| MS.gene26296.t1 | MTR_2g008160 | 37.539 | 317 | 165 | 10 | 23 | 321 | 22 | 323 | 4.55e-52 | 174 |
| MS.gene26296.t1 | MTR_2g078610 | 34.911 | 338 | 174 | 9 | 23 | 320 | 74 | 405 | 7.25e-52 | 176 |
| MS.gene26296.t1 | MTR_2g077990 | 35.799 | 338 | 171 | 10 | 23 | 320 | 74 | 405 | 1.54e-51 | 175 |
| MS.gene26296.t1 | MTR_6g043280 | 35.505 | 307 | 184 | 11 | 20 | 321 | 35 | 332 | 9.56e-51 | 171 |
| MS.gene26296.t1 | MTR_2g067440 | 35.417 | 336 | 172 | 10 | 23 | 320 | 58 | 386 | 1.09e-50 | 172 |
| MS.gene26296.t1 | MTR_1g066710 | 35.082 | 305 | 186 | 7 | 23 | 321 | 25 | 323 | 7.68e-50 | 169 |
| MS.gene26296.t1 | MTR_1g009750 | 34.835 | 333 | 177 | 10 | 3 | 321 | 5 | 311 | 3.28e-49 | 167 |
| MS.gene26296.t1 | MTR_6g043460 | 34.462 | 325 | 196 | 8 | 3 | 317 | 7 | 324 | 3.30e-49 | 167 |
| MS.gene26296.t1 | MTR_6g043240 | 36.156 | 307 | 179 | 11 | 20 | 321 | 37 | 331 | 2.43e-48 | 166 |
| MS.gene26296.t1 | MTR_1g066380 | 34.314 | 306 | 189 | 7 | 22 | 321 | 24 | 323 | 4.11e-48 | 164 |
| MS.gene26296.t1 | MTR_2g008730 | 42.510 | 247 | 123 | 8 | 87 | 321 | 62 | 301 | 4.26e-48 | 163 |
| MS.gene26296.t1 | MTR_1g066640 | 34.426 | 305 | 188 | 7 | 23 | 321 | 25 | 323 | 2.91e-47 | 162 |
| MS.gene26296.t1 | MTR_4g132490 | 30.820 | 305 | 199 | 5 | 24 | 321 | 28 | 327 | 3.82e-47 | 162 |
| MS.gene26296.t1 | MTR_3g105790 | 34.441 | 331 | 198 | 6 | 1 | 321 | 1 | 322 | 1.46e-46 | 160 |
| MS.gene26296.t1 | MTR_2g078280 | 35.692 | 325 | 163 | 10 | 23 | 307 | 74 | 392 | 1.93e-46 | 162 |
| MS.gene26296.t1 | MTR_1g066680 | 33.770 | 305 | 189 | 8 | 23 | 321 | 25 | 322 | 5.42e-45 | 156 |
| MS.gene26296.t1 | MTR_7g072490 | 41.224 | 245 | 84 | 6 | 71 | 314 | 2 | 187 | 5.65e-44 | 150 |
| MS.gene26296.t1 | MTR_0147s0010 | 31.790 | 324 | 174 | 8 | 25 | 320 | 77 | 381 | 1.25e-43 | 154 |
| MS.gene26296.t1 | MTR_2g067450 | 35.144 | 313 | 176 | 10 | 23 | 320 | 9 | 309 | 2.24e-43 | 151 |
| MS.gene26296.t1 | MTR_3g072260 | 57.364 | 129 | 52 | 2 | 7 | 133 | 6 | 133 | 1.24e-42 | 144 |
| MS.gene26296.t1 | MTR_5g033470 | 31.290 | 310 | 195 | 8 | 25 | 321 | 73 | 377 | 1.90e-42 | 150 |
| MS.gene26296.t1 | MTR_4g132110 | 32.895 | 304 | 192 | 6 | 25 | 322 | 32 | 329 | 2.21e-42 | 149 |
| MS.gene26296.t1 | MTR_2g008160 | 34.727 | 311 | 147 | 10 | 23 | 321 | 22 | 288 | 1.40e-40 | 143 |
| MS.gene26296.t1 | MTR_4g132110 | 32.248 | 307 | 195 | 6 | 25 | 322 | 32 | 334 | 2.36e-40 | 144 |
| MS.gene26296.t1 | MTR_5g074770 | 57.143 | 112 | 43 | 1 | 209 | 320 | 2 | 108 | 3.23e-39 | 134 |
| MS.gene26296.t1 | MTR_2g008160 | 42.373 | 177 | 95 | 5 | 23 | 199 | 22 | 191 | 5.14e-38 | 134 |
| MS.gene26296.t1 | MTR_2g029880 | 41.489 | 188 | 94 | 3 | 143 | 323 | 12 | 190 | 5.73e-38 | 134 |
| MS.gene26296.t1 | MTR_1g066380 | 32.819 | 259 | 162 | 7 | 69 | 321 | 3 | 255 | 7.98e-35 | 127 |
| MS.gene26296.t1 | MTR_3g105790 | 35.833 | 240 | 139 | 5 | 92 | 321 | 12 | 246 | 1.84e-29 | 113 |
| MS.gene26296.t1 | MTR_3g462850 | 39.716 | 141 | 74 | 5 | 192 | 321 | 9 | 149 | 1.57e-20 | 86.7 |
| MS.gene26296.t1 | MTR_1g089005 | 38.971 | 136 | 73 | 4 | 9 | 138 | 1 | 132 | 1.93e-19 | 84.0 |
| MS.gene26296.t1 | MTR_2g078560 | 30.131 | 229 | 117 | 7 | 131 | 320 | 95 | 319 | 2.09e-19 | 87.4 |
| MS.gene26296.t1 | MTR_4g031040 | 34.911 | 169 | 71 | 3 | 84 | 252 | 1 | 130 | 9.88e-19 | 81.6 |
| MS.gene26296.t1 | MTR_6g048160 | 54.795 | 73 | 28 | 3 | 64 | 136 | 22 | 89 | 4.48e-18 | 78.2 |
| MS.gene26296.t1 | MTR_5g058120 | 35.669 | 157 | 92 | 3 | 163 | 317 | 6 | 155 | 1.50e-17 | 81.3 |
| MS.gene26296.t1 | MTR_4g114220 | 45.652 | 92 | 37 | 4 | 51 | 140 | 29 | 109 | 1.44e-16 | 75.9 |
| MS.gene26296.t1 | MTR_2g029930 | 43.434 | 99 | 28 | 3 | 23 | 107 | 17 | 101 | 1.93e-16 | 74.3 |
| MS.gene26296.t1 | MTR_3g086710 | 55.932 | 59 | 26 | 0 | 12 | 70 | 6 | 64 | 2.28e-16 | 73.6 |
| MS.gene26296.t1 | MTR_7g086790 | 31.383 | 188 | 110 | 7 | 72 | 258 | 17 | 186 | 9.94e-16 | 74.7 |
| MS.gene26296.t1 | MTR_1g098320 | 41.975 | 81 | 45 | 1 | 242 | 322 | 47 | 125 | 5.56e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26296.t1 | AT5G05340 | 56.291 | 302 | 124 | 5 | 23 | 321 | 28 | 324 | 4.69e-116 | 338 |
| MS.gene26296.t1 | AT1G14550 | 50.313 | 320 | 152 | 6 | 5 | 321 | 6 | 321 | 1.06e-102 | 304 |
| MS.gene26296.t1 | AT2G18150 | 49.511 | 307 | 143 | 5 | 23 | 321 | 34 | 336 | 6.47e-102 | 303 |
| MS.gene26296.t1 | AT5G58400 | 49.691 | 324 | 153 | 7 | 3 | 321 | 7 | 325 | 1.06e-101 | 302 |
| MS.gene26296.t1 | AT5G58390 | 52.201 | 318 | 143 | 6 | 8 | 321 | 4 | 316 | 1.48e-101 | 301 |
| MS.gene26296.t1 | AT5G66390 | 50.980 | 306 | 138 | 5 | 25 | 322 | 33 | 334 | 1.44e-100 | 299 |
| MS.gene26296.t1 | AT2G18140 | 50.164 | 305 | 140 | 5 | 25 | 321 | 35 | 335 | 3.21e-98 | 293 |
| MS.gene26296.t1 | AT4G36430 | 49.186 | 307 | 144 | 5 | 23 | 321 | 28 | 330 | 4.46e-98 | 293 |
| MS.gene26296.t1 | AT1G14540 | 48.837 | 301 | 148 | 5 | 23 | 321 | 19 | 315 | 1.47e-94 | 283 |
| MS.gene26296.t1 | AT5G06720 | 44.272 | 323 | 169 | 4 | 7 | 321 | 14 | 333 | 8.82e-94 | 282 |
| MS.gene26296.t1 | AT1G44970 | 47.231 | 307 | 151 | 4 | 23 | 321 | 43 | 346 | 7.34e-93 | 280 |
| MS.gene26296.t1 | AT4G08770 | 48.408 | 314 | 149 | 6 | 18 | 321 | 17 | 327 | 1.25e-91 | 277 |
| MS.gene26296.t1 | AT3G50990 | 46.474 | 312 | 155 | 5 | 19 | 322 | 35 | 342 | 2.16e-91 | 276 |
| MS.gene26296.t1 | AT5G06730 | 43.034 | 323 | 173 | 4 | 7 | 321 | 15 | 334 | 4.32e-90 | 273 |
| MS.gene26296.t1 | AT2G38390 | 48.052 | 308 | 148 | 5 | 23 | 321 | 29 | 333 | 2.43e-89 | 271 |
| MS.gene26296.t1 | AT4G08780 | 47.452 | 314 | 152 | 6 | 18 | 321 | 17 | 327 | 5.95e-89 | 270 |
| MS.gene26296.t1 | AT5G19890 | 46.341 | 328 | 155 | 10 | 6 | 322 | 11 | 328 | 1.26e-88 | 268 |
| MS.gene26296.t1 | AT3G49120 | 46.326 | 313 | 155 | 6 | 19 | 321 | 26 | 335 | 9.67e-88 | 267 |
| MS.gene26296.t1 | AT3G32980 | 46.602 | 309 | 152 | 6 | 23 | 321 | 29 | 334 | 4.62e-87 | 265 |
| MS.gene26296.t1 | AT2G38380 | 47.727 | 308 | 149 | 5 | 23 | 321 | 29 | 333 | 1.94e-86 | 264 |
| MS.gene26296.t1 | AT3G49110 | 46.278 | 309 | 153 | 6 | 23 | 321 | 31 | 336 | 4.73e-86 | 263 |
| MS.gene26296.t1 | AT1G49570 | 48.039 | 306 | 143 | 7 | 23 | 317 | 46 | 346 | 7.77e-86 | 262 |
| MS.gene26296.t1 | AT1G68850 | 43.787 | 338 | 165 | 10 | 4 | 321 | 3 | 335 | 7.35e-85 | 259 |
| MS.gene26296.t1 | AT4G16270 | 46.179 | 301 | 146 | 7 | 30 | 321 | 55 | 348 | 8.74e-83 | 254 |
| MS.gene26296.t1 | AT2G35380 | 45.260 | 327 | 161 | 7 | 8 | 321 | 14 | 335 | 2.38e-82 | 253 |
| MS.gene26296.t1 | AT5G51890 | 44.308 | 325 | 161 | 11 | 8 | 321 | 7 | 322 | 1.57e-81 | 250 |
| MS.gene26296.t1 | AT2G22420 | 41.615 | 322 | 170 | 8 | 11 | 322 | 7 | 320 | 4.42e-80 | 247 |
| MS.gene26296.t1 | AT1G71695 | 42.997 | 307 | 166 | 6 | 19 | 321 | 38 | 339 | 4.61e-79 | 245 |
| MS.gene26296.t1 | AT5G19880 | 43.505 | 331 | 165 | 8 | 5 | 321 | 7 | 329 | 1.14e-77 | 241 |
| MS.gene26296.t1 | AT3G01190 | 43.092 | 304 | 158 | 7 | 25 | 321 | 26 | 321 | 6.76e-74 | 231 |
| MS.gene26296.t1 | AT4G33420 | 42.953 | 298 | 160 | 7 | 25 | 321 | 37 | 325 | 9.25e-74 | 230 |
| MS.gene26296.t1 | AT4G33420 | 42.953 | 298 | 160 | 7 | 25 | 321 | 84 | 372 | 4.23e-73 | 230 |
| MS.gene26296.t1 | AT5G42180 | 40.854 | 328 | 174 | 10 | 1 | 320 | 1 | 316 | 2.58e-72 | 226 |
| MS.gene26296.t1 | AT4G11290 | 39.571 | 326 | 178 | 9 | 8 | 321 | 8 | 326 | 3.56e-72 | 226 |
| MS.gene26296.t1 | AT5G15180 | 41.176 | 323 | 176 | 7 | 7 | 321 | 13 | 329 | 5.81e-72 | 226 |
| MS.gene26296.t1 | AT3G03670 | 39.130 | 322 | 180 | 8 | 8 | 321 | 8 | 321 | 2.69e-70 | 221 |
| MS.gene26296.t1 | AT1G05260 | 38.253 | 332 | 189 | 9 | 1 | 322 | 1 | 326 | 2.48e-69 | 219 |
| MS.gene26296.t1 | AT1G05240 | 41.333 | 300 | 159 | 7 | 28 | 317 | 29 | 321 | 5.95e-69 | 218 |
| MS.gene26296.t1 | AT1G05250 | 41.333 | 300 | 159 | 7 | 28 | 317 | 29 | 321 | 5.95e-69 | 218 |
| MS.gene26296.t1 | AT5G64120 | 42.333 | 300 | 156 | 8 | 29 | 321 | 39 | 328 | 9.74e-68 | 215 |
| MS.gene26296.t1 | AT3G21770 | 39.677 | 310 | 172 | 8 | 17 | 317 | 21 | 324 | 2.59e-67 | 214 |
| MS.gene26296.t1 | AT5G40150 | 39.145 | 304 | 175 | 6 | 23 | 321 | 30 | 328 | 5.93e-64 | 205 |
| MS.gene26296.t1 | AT3G28200 | 38.284 | 303 | 178 | 6 | 23 | 321 | 19 | 316 | 1.85e-62 | 201 |
| MS.gene26296.t1 | AT5G17820 | 37.231 | 325 | 173 | 10 | 5 | 321 | 12 | 313 | 3.68e-62 | 200 |
| MS.gene26296.t1 | AT5G17820 | 37.231 | 325 | 173 | 10 | 5 | 321 | 65 | 366 | 3.04e-61 | 199 |
| MS.gene26296.t1 | AT5G39580 | 39.319 | 323 | 178 | 10 | 7 | 321 | 7 | 319 | 1.67e-60 | 196 |
| MS.gene26296.t1 | AT5G22410 | 34.557 | 327 | 193 | 9 | 3 | 318 | 6 | 322 | 3.29e-60 | 196 |
| MS.gene26296.t1 | AT4G26010 | 36.250 | 320 | 187 | 11 | 5 | 321 | 4 | 309 | 1.17e-58 | 191 |
| MS.gene26296.t1 | AT4G26010 | 36.250 | 320 | 187 | 11 | 5 | 321 | 32 | 337 | 2.04e-58 | 191 |
| MS.gene26296.t1 | AT5G47000 | 38.344 | 326 | 186 | 8 | 5 | 323 | 15 | 332 | 2.08e-58 | 191 |
| MS.gene26296.t1 | AT2G41480 | 36.474 | 329 | 185 | 10 | 7 | 321 | 10 | 328 | 2.92e-58 | 191 |
| MS.gene26296.t1 | AT2G18980 | 36.905 | 336 | 184 | 11 | 1 | 321 | 1 | 323 | 9.34e-58 | 189 |
| MS.gene26296.t1 | AT4G17690 | 38.854 | 314 | 180 | 7 | 16 | 323 | 17 | 324 | 1.09e-57 | 189 |
| MS.gene26296.t1 | AT1G30870 | 40.584 | 308 | 159 | 11 | 25 | 321 | 51 | 345 | 2.59e-57 | 189 |
| MS.gene26296.t1 | AT2G35380 | 45.020 | 251 | 121 | 6 | 84 | 321 | 1 | 247 | 3.12e-57 | 185 |
| MS.gene26296.t1 | AT5G64100 | 38.284 | 303 | 167 | 9 | 28 | 321 | 40 | 331 | 4.34e-57 | 187 |
| MS.gene26296.t1 | AT4G37530 | 38.658 | 313 | 170 | 8 | 23 | 321 | 25 | 329 | 5.98e-57 | 187 |
| MS.gene26296.t1 | AT5G64110 | 38.532 | 327 | 181 | 9 | 5 | 321 | 14 | 330 | 6.62e-57 | 187 |
| MS.gene26296.t1 | AT1G34510 | 36.570 | 309 | 185 | 9 | 14 | 321 | 11 | 309 | 2.76e-56 | 185 |
| MS.gene26296.t1 | AT4G30170 | 37.942 | 311 | 171 | 10 | 23 | 321 | 25 | 325 | 4.34e-56 | 185 |
| MS.gene26296.t1 | AT1G24110 | 35.938 | 320 | 187 | 8 | 14 | 321 | 9 | 322 | 4.70e-56 | 185 |
| MS.gene26296.t1 | AT2G39040 | 38.339 | 313 | 173 | 8 | 23 | 321 | 44 | 350 | 6.53e-55 | 182 |
| MS.gene26296.t1 | AT5G67400 | 37.160 | 331 | 184 | 10 | 8 | 321 | 6 | 329 | 2.80e-53 | 178 |
| MS.gene26296.t1 | AT4G33870 | 32.938 | 337 | 175 | 9 | 28 | 320 | 71 | 400 | 3.24e-53 | 180 |
| MS.gene26296.t1 | AT2G34060 | 35.777 | 341 | 188 | 12 | 3 | 318 | 9 | 343 | 6.25e-53 | 177 |
| MS.gene26296.t1 | AT4G37520 | 36.306 | 314 | 176 | 7 | 23 | 321 | 25 | 329 | 1.92e-52 | 176 |
| MS.gene26296.t1 | AT5G14130 | 34.259 | 324 | 179 | 6 | 16 | 321 | 23 | 330 | 3.05e-52 | 175 |
| MS.gene26296.t1 | AT5G14130 | 34.259 | 324 | 179 | 6 | 16 | 321 | 64 | 371 | 6.58e-52 | 175 |
| MS.gene26296.t1 | AT4G25980 | 33.837 | 331 | 199 | 9 | 2 | 321 | 5 | 326 | 6.81e-51 | 171 |
| MS.gene26296.t1 | AT4G37520 | 35.987 | 314 | 174 | 8 | 23 | 321 | 25 | 326 | 1.86e-50 | 170 |
| MS.gene26296.t1 | AT1G77100 | 36.585 | 328 | 185 | 12 | 5 | 321 | 4 | 319 | 4.45e-50 | 169 |
| MS.gene26296.t1 | AT3G49960 | 37.143 | 315 | 176 | 10 | 21 | 321 | 23 | 329 | 4.90e-50 | 169 |
| MS.gene26296.t1 | AT2G24800 | 34.936 | 312 | 181 | 7 | 22 | 321 | 28 | 329 | 1.38e-49 | 168 |
| MS.gene26296.t1 | AT5G24070 | 34.969 | 326 | 185 | 11 | 11 | 321 | 22 | 335 | 4.77e-49 | 167 |
| MS.gene26296.t1 | AT2G43480 | 33.851 | 322 | 187 | 10 | 15 | 321 | 25 | 335 | 5.16e-49 | 167 |
| MS.gene26296.t1 | AT4G31760 | 33.333 | 324 | 197 | 7 | 8 | 321 | 12 | 326 | 2.01e-48 | 165 |
| MS.gene26296.t1 | AT4G37530 | 39.231 | 260 | 138 | 7 | 23 | 268 | 25 | 278 | 2.13e-48 | 164 |
| MS.gene26296.t1 | AT2G37130 | 34.667 | 300 | 185 | 7 | 28 | 321 | 2 | 296 | 1.08e-46 | 160 |
| MS.gene26296.t1 | AT2G37130 | 34.426 | 305 | 189 | 7 | 23 | 321 | 28 | 327 | 1.49e-46 | 160 |
| MS.gene26296.t1 | AT3G17070 | 31.731 | 312 | 188 | 8 | 25 | 321 | 38 | 339 | 1.12e-44 | 155 |
| MS.gene26296.t1 | AT4G21960 | 31.908 | 304 | 195 | 6 | 25 | 322 | 31 | 328 | 6.44e-42 | 148 |
| MS.gene26296.t1 | AT4G25980 | 39.394 | 198 | 111 | 6 | 2 | 199 | 50 | 238 | 8.50e-38 | 136 |
| MS.gene26296.t1 | AT5G39580 | 40.816 | 196 | 108 | 6 | 7 | 202 | 7 | 194 | 2.06e-35 | 129 |
| MS.gene26296.t1 | AT2G24800 | 38.660 | 194 | 108 | 4 | 22 | 215 | 28 | 210 | 7.04e-31 | 117 |
| MS.gene26296.t1 | AT3G17070 | 29.225 | 284 | 175 | 9 | 53 | 321 | 4 | 276 | 1.31e-30 | 117 |
Find 56 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAACAACTAAATCTTTA+AGG | 0.112475 | 5.4:-59598035 | None:intergenic |
| CCTCTAATTGAATTGATATT+TGG | 0.121288 | 5.4:-59597525 | None:intergenic |
| CAAATTCTGTCATAATAATT+AGG | 0.165268 | 5.4:-59596805 | None:intergenic |
| CTGCAAATTGGCTGCAAAAT+TGG | 0.200040 | 5.4:-59598133 | None:intergenic |
| CCAAATATCAATTCAATTAG+AGG | 0.217538 | 5.4:+59597525 | MS.gene26296:CDS |
| GAAGCCTCTTACCGGGAAAA+AGG | 0.239549 | 5.4:+59598392 | MS.gene26296:CDS |
| TTATCGTCGCCGCCGATTCT+AGG | 0.257616 | 5.4:-59598165 | None:intergenic |
| GTCTCTAAAGTTAGTGCATT+TGG | 0.280533 | 5.4:-59598082 | None:intergenic |
| AAAGATTTAGTTGTTCTATC+TGG | 0.280970 | 5.4:+59598039 | MS.gene26296:CDS |
| TATCCTTCTTCATTCATATC+TGG | 0.282510 | 5.4:-59598446 | None:intergenic |
| AAATTCTGTCATAATAATTA+GGG | 0.289018 | 5.4:-59596804 | None:intergenic |
| TATGATGTGTCAACTTTGTT+AGG | 0.315727 | 5.4:-59598210 | None:intergenic |
| AGGGCATGTCTTCTGCAAAT+TGG | 0.324725 | 5.4:-59598145 | None:intergenic |
| GGTAATTTGAAGCCTCTTAC+CGG | 0.347939 | 5.4:+59598384 | MS.gene26296:CDS |
| AACATCACGTTTGCAAGCTT+TGG | 0.348583 | 5.4:-59597583 | None:intergenic |
| AGTTGGGTGGTAAGCAATAT+TGG | 0.363597 | 5.4:+59597887 | MS.gene26296:intron |
| CTATCTGGTGGACACACAAT+TGG | 0.400116 | 5.4:+59598054 | MS.gene26296:CDS |
| TTTATGATTGGCAATGCCTT+AGG | 0.415076 | 5.4:-59596829 | None:intergenic |
| TGGAGTTTCTATGATTAAGA+TGG | 0.424465 | 5.4:+59598362 | MS.gene26296:CDS |
| TATCGTCGCCGCCGATTCTA+GGG | 0.438871 | 5.4:-59598164 | None:intergenic |
| AGGTCTCCTTCATTCTGATC+AGG | 0.453807 | 5.4:+59598257 | MS.gene26296:CDS |
| AGCTGCTATAGCTAAAATAT+CGG | 0.458807 | 5.4:-59597616 | None:intergenic |
| TATTGGTACCAAGTGTTACT+AGG | 0.461210 | 5.4:+59597904 | MS.gene26296:CDS |
| GGAGTTTCTATGATTAAGAT+GGG | 0.461747 | 5.4:+59598363 | MS.gene26296:CDS |
| GATTTAGTTGTTCTATCTGG+TGG | 0.476076 | 5.4:+59598042 | MS.gene26296:CDS |
| CTCTTCTTCCTAGTAACACT+TGG | 0.476428 | 5.4:-59597912 | None:intergenic |
| AGTTGTGAGAAGTTGAAGAA+TGG | 0.487622 | 5.4:-59597982 | None:intergenic |
| GAGATTCAAGATTTGCAAGC+AGG | 0.488930 | 5.4:+59597932 | MS.gene26296:CDS |
| TGCAAAATTGGTGTCTATGT+TGG | 0.502037 | 5.4:-59598121 | None:intergenic |
| CAGAAGACATGCCCTAGAAT+CGG | 0.512419 | 5.4:+59598153 | MS.gene26296:CDS |
| TCTTCTCACCAACGAAGGTA+GGG | 0.513623 | 5.4:-59597494 | None:intergenic |
| AAAGCTCCTGATCAGAATGA+AGG | 0.528130 | 5.4:-59598263 | None:intergenic |
| GAGAAGTTGAAGAATGGAGG+AGG | 0.530102 | 5.4:-59597976 | None:intergenic |
| TTGTTAGGAGTAGAATCAAA+TGG | 0.530962 | 5.4:-59598195 | None:intergenic |
| TGTGAGAAGTTGAAGAATGG+AGG | 0.539815 | 5.4:-59597979 | None:intergenic |
| GTAATTTGAAGCCTCTTACC+GGG | 0.547800 | 5.4:+59598385 | MS.gene26296:CDS |
| TTACGTTAACAAAGCAGTCA+TGG | 0.552379 | 5.4:-59596918 | None:intergenic |
| AATGCACTAACTTTAGAGAC+AGG | 0.556592 | 5.4:+59598085 | MS.gene26296:CDS |
| TTATGACAGAATTTGTCCTA+AGG | 0.559599 | 5.4:+59596813 | MS.gene26296:CDS |
| TTCATTAATTAATAGTTGGG+TGG | 0.560408 | 5.4:+59597874 | MS.gene26296:intron |
| AATTATTCGTGAGCCACGCA+TGG | 0.561525 | 5.4:+59596870 | MS.gene26296:CDS |
| AGATTCAAGATTTGCAAGCA+GGG | 0.563486 | 5.4:+59597933 | MS.gene26296:CDS |
| GAAACTGCATAGGGTTGTGA+TGG | 0.565725 | 5.4:+59597450 | MS.gene26296:intron |
| AGTTGACACATCATATTACA+AGG | 0.567334 | 5.4:+59598218 | MS.gene26296:CDS |
| TGGTTCTCAAAGTGATAGAT+TGG | 0.568189 | 5.4:+59598296 | MS.gene26296:CDS |
| AGGACTCAAAATTGTTGCAA+AGG | 0.578469 | 5.4:-59596764 | None:intergenic |
| CTTCTCACCAACGAAGGTAG+GGG | 0.584326 | 5.4:-59597493 | None:intergenic |
| GTCTTCTCACCAACGAAGGT+AGG | 0.586647 | 5.4:-59597495 | None:intergenic |
| GATGACACCCCTACCTTCGT+TGG | 0.589855 | 5.4:+59597486 | MS.gene26296:CDS |
| AAGGCTTTGTTGTATAAACA+AGG | 0.605317 | 5.4:+59598237 | MS.gene26296:CDS |
| ATTATTCGTGAGCCACGCAT+GGG | 0.612352 | 5.4:+59596871 | MS.gene26296:CDS |
| ATCACAAATTTCAAGTCACA+TGG | 0.624562 | 5.4:+59598006 | MS.gene26296:CDS |
| AGCAACGATGCTCCCATGCG+TGG | 0.625399 | 5.4:-59596883 | None:intergenic |
| TGCAGTCTTCTCACCAACGA+AGG | 0.642554 | 5.4:-59597499 | None:intergenic |
| AAGACATGCCCTAGAATCGG+CGG | 0.653490 | 5.4:+59598156 | MS.gene26296:CDS |
| AATTCTGTCATAATAATTAG+GGG | 0.671116 | 5.4:-59596803 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCTGTCATAATAATTA+GGG | - | chr5.4:59596807-59596826 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTCGTGAATT+TGG | + | chr5.4:59597811-59597830 | MS.gene26296:intron | 15.0% |
| !!! | TTAACAATTTCTTTTATGAT+TGG | - | chr5.4:59596844-59596863 | None:intergenic | 15.0% |
| !! | AATAATTATGTCAAACAACT+AGG | + | chr5.4:59597146-59597165 | MS.gene26296:intron | 20.0% |
| !! | AATTCTGTCATAATAATTAG+GGG | - | chr5.4:59596806-59596825 | None:intergenic | 20.0% |
| !! | AGGTATTAGTTATACTATAA+TGG | - | chr5.4:59597421-59597440 | None:intergenic | 20.0% |
| !! | ATAGAACAACTAAATCTTTA+AGG | - | chr5.4:59598038-59598057 | None:intergenic | 20.0% |
| !! | CAAATTCTGTCATAATAATT+AGG | - | chr5.4:59596808-59596827 | None:intergenic | 20.0% |
| !! | GCTTTCATTAATTAATAGTT+GGG | + | chr5.4:59597871-59597890 | MS.gene26296:intron | 20.0% |
| !! | TGCTTTCATTAATTAATAGT+TGG | + | chr5.4:59597870-59597889 | MS.gene26296:intron | 20.0% |
| ! | AAAGATTTAGTTGTTCTATC+TGG | + | chr5.4:59598039-59598058 | MS.gene26296:CDS | 25.0% |
| ! | AAGTTTGCAAGAATATTAGT+TGG | + | chr5.4:59597181-59597200 | MS.gene26296:intron | 25.0% |
| ! | AGTTTGCAAGAATATTAGTT+GGG | + | chr5.4:59597182-59597201 | MS.gene26296:intron | 25.0% |
| ! | CCAAATATCAATTCAATTAG+AGG | + | chr5.4:59597525-59597544 | MS.gene26296:CDS | 25.0% |
| ! | CCTCTAATTGAATTGATATT+TGG | - | chr5.4:59597528-59597547 | None:intergenic | 25.0% |
| ! | TTCATTAATTAATAGTTGGG+TGG | + | chr5.4:59597874-59597893 | MS.gene26296:intron | 25.0% |
| !! | TAGTTAGAAGTGCAAAATAT+CGG | - | chr5.4:59597670-59597689 | None:intergenic | 25.0% |
| !! | TATGCTTTTGCTTATGATTT+TGG | + | chr5.4:59598342-59598361 | MS.gene26296:CDS | 25.0% |
| !!! | GATAGTGTGTATTTTAAGTT+TGG | + | chr5.4:59596964-59596983 | MS.gene26296:intron | 25.0% |
| AATATCGGAAACACTTACTA+TGG | - | chr5.4:59597655-59597674 | None:intergenic | 30.0% | |
| AGCTGCTATAGCTAAAATAT+CGG | - | chr5.4:59597619-59597638 | None:intergenic | 30.0% | |
| AGTTGACACATCATATTACA+AGG | + | chr5.4:59598218-59598237 | MS.gene26296:CDS | 30.0% | |
| GAACTATATGAAACTGCATA+GGG | + | chr5.4:59597441-59597460 | MS.gene26296:intron | 30.0% | |
| GGAGTTTCTATGATTAAGAT+GGG | + | chr5.4:59598363-59598382 | MS.gene26296:CDS | 30.0% | |
| GTGAAAGATCTACTATTTAC+TGG | - | chr5.4:59597107-59597126 | None:intergenic | 30.0% | |
| TATCCCAAAGCTCATAATAA+AGG | + | chr5.4:59597034-59597053 | MS.gene26296:intron | 30.0% | |
| TATGATGTGTCAACTTTGTT+AGG | - | chr5.4:59598213-59598232 | None:intergenic | 30.0% | |
| TATGCAGTTTCATATAGTTC+AGG | - | chr5.4:59597441-59597460 | None:intergenic | 30.0% | |
| TGAACTATATGAAACTGCAT+AGG | + | chr5.4:59597440-59597459 | MS.gene26296:intron | 30.0% | |
| TGGAGTTTCTATGATTAAGA+TGG | + | chr5.4:59598362-59598381 | MS.gene26296:CDS | 30.0% | |
| TTATATTGCTGCAACAATTG+TGG | - | chr5.4:59597715-59597734 | None:intergenic | 30.0% | |
| TTATGACAGAATTTGTCCTA+AGG | + | chr5.4:59596813-59596832 | MS.gene26296:CDS | 30.0% | |
| TTGTTAGGAGTAGAATCAAA+TGG | - | chr5.4:59598198-59598217 | None:intergenic | 30.0% | |
| TTTGCACTTCTAACTAAACA+AGG | + | chr5.4:59597674-59597693 | MS.gene26296:intron | 30.0% | |
| ! | ATCACAAATTTCAAGTCACA+TGG | + | chr5.4:59598006-59598025 | MS.gene26296:CDS | 30.0% |
| ! | CAATTCAATTAGAGGTTTTG+AGG | + | chr5.4:59597533-59597552 | MS.gene26296:CDS | 30.0% |
| !! | AAGGCTTTGTTGTATAAACA+AGG | + | chr5.4:59598237-59598256 | MS.gene26296:CDS | 30.0% |
| !! | CAAAATTTCAGTTTTGATCG+CGG | - | chr5.4:59597785-59597804 | None:intergenic | 30.0% |
| !! | TATCCAATTTGTGCTTTTTG+TGG | + | chr5.4:59596738-59596757 | MS.gene26296:CDS | 30.0% |
| !!! | AGTGTGTATTTTAAGTTTGG+AGG | + | chr5.4:59596967-59596986 | MS.gene26296:intron | 30.0% |
| AGATTCAAGATTTGCAAGCA+GGG | + | chr5.4:59597933-59597952 | MS.gene26296:CDS | 35.0% | |
| AGGACTCAAAATTGTTGCAA+AGG | - | chr5.4:59596767-59596786 | None:intergenic | 35.0% | |
| AGTCGATGTATTCAAAACTG+CGG | - | chr5.4:59597754-59597773 | None:intergenic | 35.0% | |
| AGTTGTGAGAAGTTGAAGAA+TGG | - | chr5.4:59597985-59598004 | None:intergenic | 35.0% | |
| GATTTAGTTGTTCTATCTGG+TGG | + | chr5.4:59598042-59598061 | MS.gene26296:CDS | 35.0% | |
| GCTCCTTTATTATGAGCTTT+GGG | - | chr5.4:59597040-59597059 | None:intergenic | 35.0% | |
| GTCAAACAACTAGGTATCAA+TGG | + | chr5.4:59597155-59597174 | MS.gene26296:intron | 35.0% | |
| TGCTCCTTTATTATGAGCTT+TGG | - | chr5.4:59597041-59597060 | None:intergenic | 35.0% | |
| TGGTTCTCAAAGTGATAGAT+TGG | + | chr5.4:59598296-59598315 | MS.gene26296:CDS | 35.0% | |
| TTACGTTAACAAAGCAGTCA+TGG | - | chr5.4:59596921-59596940 | None:intergenic | 35.0% | |
| TTGCTTCATTTACTCTGCTA+TGG | + | chr5.4:59597008-59597027 | MS.gene26296:intron | 35.0% | |
| TTTATGATTGGCAATGCCTT+AGG | - | chr5.4:59596832-59596851 | None:intergenic | 35.0% | |
| ! | AATGCACTAACTTTAGAGAC+AGG | + | chr5.4:59598085-59598104 | MS.gene26296:CDS | 35.0% |
| ! | GAGTAAATGAAGCAACCTTT+TGG | - | chr5.4:59597003-59597022 | None:intergenic | 35.0% |
| ! | TATTGGTACCAAGTGTTACT+AGG | + | chr5.4:59597904-59597923 | MS.gene26296:CDS | 35.0% |
| ! | TCTGATCAGGAGCTTTTTAA+AGG | + | chr5.4:59598270-59598289 | MS.gene26296:CDS | 35.0% |
| ! | TGACCACAAAAAGCACAAAT+TGG | - | chr5.4:59596744-59596763 | None:intergenic | 35.0% |
| ! | TGCAAAATTGGTGTCTATGT+TGG | - | chr5.4:59598124-59598143 | None:intergenic | 35.0% |
| ! | TTTAAGTTTGGAGGCCTATA+TGG | + | chr5.4:59596976-59596995 | MS.gene26296:intron | 35.0% |
| !! | GTCTCTAAAGTTAGTGCATT+TGG | - | chr5.4:59598085-59598104 | None:intergenic | 35.0% |
| AAAGCTCCTGATCAGAATGA+AGG | - | chr5.4:59598266-59598285 | None:intergenic | 40.0% | |
| AACATCACGTTTGCAAGCTT+TGG | - | chr5.4:59597586-59597605 | None:intergenic | 40.0% | |
| AGTTGGGTGGTAAGCAATAT+TGG | + | chr5.4:59597887-59597906 | MS.gene26296:intron | 40.0% | |
| CTCTTCTTCCTAGTAACACT+TGG | - | chr5.4:59597915-59597934 | None:intergenic | 40.0% | |
| CTGCAAATTGGCTGCAAAAT+TGG | - | chr5.4:59598136-59598155 | None:intergenic | 40.0% | |
| GAGATTCAAGATTTGCAAGC+AGG | + | chr5.4:59597932-59597951 | MS.gene26296:CDS | 40.0% | |
| TGTGAGAAGTTGAAGAATGG+AGG | - | chr5.4:59597982-59598001 | None:intergenic | 40.0% | |
| ! | AGCAACCTTTTGGACCATAT+AGG | - | chr5.4:59596993-59597012 | None:intergenic | 40.0% |
| ! | ATTAGGGGTCAGTTTTGCAA+TGG | - | chr5.4:59596791-59596810 | None:intergenic | 40.0% |
| ! | GGTAATTTGAAGCCTCTTAC+CGG | + | chr5.4:59598384-59598403 | MS.gene26296:CDS | 40.0% |
| ! | GTAATTTGAAGCCTCTTACC+GGG | + | chr5.4:59598385-59598404 | MS.gene26296:CDS | 40.0% |
| !! | ACTGGCTTGCTCAAATAGAT+AGG | - | chr5.4:59597089-59597108 | None:intergenic | 40.0% |
| !! | CAGGAGCTTTTTAAAGGTGA+TGG | + | chr5.4:59598276-59598295 | MS.gene26296:CDS | 40.0% |
| AAGCCTCTTACCGGGAAAAA+GGG | + | chr5.4:59598393-59598412 | MS.gene26296:CDS | 45.0% | |
| AATTATTCGTGAGCCACGCA+TGG | + | chr5.4:59596870-59596889 | MS.gene26296:CDS | 45.0% | |
| AGGGCATGTCTTCTGCAAAT+TGG | - | chr5.4:59598148-59598167 | None:intergenic | 45.0% | |
| AGGTCTCCTTCATTCTGATC+AGG | + | chr5.4:59598257-59598276 | MS.gene26296:CDS | 45.0% | |
| ATTATTCGTGAGCCACGCAT+GGG | + | chr5.4:59596871-59596890 | MS.gene26296:CDS | 45.0% | |
| CAGAAGACATGCCCTAGAAT+CGG | + | chr5.4:59598153-59598172 | MS.gene26296:CDS | 45.0% | |
| GAAACTGCATAGGGTTGTGA+TGG | + | chr5.4:59597450-59597469 | MS.gene26296:intron | 45.0% | |
| GAGAAGTTGAAGAATGGAGG+AGG | - | chr5.4:59597979-59597998 | None:intergenic | 45.0% | |
| TCTTCTCACCAACGAAGGTA+GGG | - | chr5.4:59597497-59597516 | None:intergenic | 45.0% | |
| ! | CTATCTGGTGGACACACAAT+TGG | + | chr5.4:59598054-59598073 | MS.gene26296:CDS | 45.0% |
| !!! | TAATATAGAAATATAAATTT+TGG | - | chr5.4:59597330-59597349 | None:intergenic | 5.0% |
| AAGACATGCCCTAGAATCGG+CGG | + | chr5.4:59598156-59598175 | MS.gene26296:CDS | 50.0% | |
| CTTCTCACCAACGAAGGTAG+GGG | - | chr5.4:59597496-59597515 | None:intergenic | 50.0% | |
| GAAGCCTCTTACCGGGAAAA+AGG | + | chr5.4:59598392-59598411 | MS.gene26296:CDS | 50.0% | |
| GGAGGCCTATATGGTCCAAA+AGG | + | chr5.4:59596985-59597004 | MS.gene26296:intron | 50.0% | |
| GTCTTCTCACCAACGAAGGT+AGG | - | chr5.4:59597498-59597517 | None:intergenic | 50.0% | |
| TGCAGTCTTCTCACCAACGA+AGG | - | chr5.4:59597502-59597521 | None:intergenic | 50.0% | |
| ! | CCTGATCTCACCCTTTTTCC+CGG | - | chr5.4:59598406-59598425 | None:intergenic | 50.0% |
| ! | GGGGTCAGTTTTGCAATGGT+AGG | - | chr5.4:59596787-59596806 | None:intergenic | 50.0% |
| ! | TCACCCTTTTTCCCGGTAAG+AGG | - | chr5.4:59598399-59598418 | None:intergenic | 50.0% |
| CCGGGAAAAAGGGTGAGATC+AGG | + | chr5.4:59598403-59598422 | MS.gene26296:CDS | 55.0% | |
| GATGACACCCCTACCTTCGT+TGG | + | chr5.4:59597486-59597505 | MS.gene26296:CDS | 55.0% | |
| !! | TATCGTCGCCGCCGATTCTA+GGG | - | chr5.4:59598167-59598186 | None:intergenic | 55.0% |
| !! | TTATCGTCGCCGCCGATTCT+AGG | - | chr5.4:59598168-59598187 | None:intergenic | 55.0% |
| AGCAACGATGCTCCCATGCG+TGG | - | chr5.4:59596886-59596905 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 59596727 | 59598455 | 59596727 | ID=MS.gene26296 |
| chr5.4 | mRNA | 59596727 | 59598455 | 59596727 | ID=MS.gene26296.t1;Parent=MS.gene26296 |
| chr5.4 | exon | 59596727 | 59596936 | 59596727 | ID=MS.gene26296.t1.exon1;Parent=MS.gene26296.t1 |
| chr5.4 | CDS | 59596727 | 59596936 | 59596727 | ID=cds.MS.gene26296.t1;Parent=MS.gene26296.t1 |
| chr5.4 | exon | 59597462 | 59597656 | 59597462 | ID=MS.gene26296.t1.exon2;Parent=MS.gene26296.t1 |
| chr5.4 | CDS | 59597462 | 59597656 | 59597462 | ID=cds.MS.gene26296.t1;Parent=MS.gene26296.t1 |
| chr5.4 | exon | 59597889 | 59598455 | 59597889 | ID=MS.gene26296.t1.exon3;Parent=MS.gene26296.t1 |
| chr5.4 | CDS | 59597889 | 59598455 | 59597889 | ID=cds.MS.gene26296.t1;Parent=MS.gene26296.t1 |
| Gene Sequence |
| Protein sequence |
