Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27560.t1 | XP_013449296.1 | 97.9 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 2.90E-181 | 644.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27560.t1 | O49658 | 58.6 | 268 | 91 | 7 | 6 | 255 | 13 | 278 | 2.8e-68 | 260.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27560.t1 | A0A072U297 | 97.9 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 2.1e-181 | 644.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049298 | MS.gene27560 | 0.853554 | 2.21E-61 | -1.69E-46 |
MS.gene050444 | MS.gene27560 | -0.824149 | 9.44E-54 | -1.69E-46 |
MS.gene050707 | MS.gene27560 | 0.833414 | 5.41E-56 | -1.69E-46 |
MS.gene050710 | MS.gene27560 | 0.859874 | 3.06E-63 | -1.69E-46 |
MS.gene051838 | MS.gene27560 | -0.83174 | 1.41E-55 | -1.69E-46 |
MS.gene051914 | MS.gene27560 | 0.816993 | 4.15E-52 | -1.69E-46 |
MS.gene052308 | MS.gene27560 | 0.818184 | 2.24E-52 | -1.69E-46 |
MS.gene053108 | MS.gene27560 | 0.871451 | 6.77E-67 | -1.69E-46 |
MS.gene053348 | MS.gene27560 | 0.800007 | 1.76E-48 | -1.69E-46 |
MS.gene054593 | MS.gene27560 | 0.802189 | 6.31E-49 | -1.69E-46 |
MS.gene054850 | MS.gene27560 | 0.844539 | 7.10E-59 | -1.69E-46 |
MS.gene054941 | MS.gene27560 | 0.854733 | 1.01E-61 | -1.69E-46 |
MS.gene056387 | MS.gene27560 | -0.847821 | 9.07E-60 | -1.69E-46 |
MS.gene05640 | MS.gene27560 | 0.808812 | 2.58E-50 | -1.69E-46 |
MS.gene05652 | MS.gene27560 | 0.8672 | 1.63E-65 | -1.69E-46 |
MS.gene056618 | MS.gene27560 | 0.898372 | 5.66E-77 | -1.69E-46 |
MS.gene056678 | MS.gene27560 | 0.806684 | 7.30E-50 | -1.69E-46 |
MS.gene057101 | MS.gene27560 | 0.839329 | 1.69E-57 | -1.69E-46 |
MS.gene057356 | MS.gene27560 | 0.827755 | 1.31E-54 | -1.69E-46 |
MS.gene057367 | MS.gene27560 | 0.804608 | 1.99E-49 | -1.69E-46 |
MS.gene057669 | MS.gene27560 | 0.809909 | 1.50E-50 | -1.69E-46 |
MS.gene058128 | MS.gene27560 | 0.873324 | 1.61E-67 | -1.69E-46 |
MS.gene058853 | MS.gene27560 | 0.849186 | 3.80E-60 | -1.69E-46 |
MS.gene05926 | MS.gene27560 | 0.834193 | 3.45E-56 | -1.69E-46 |
MS.gene059616 | MS.gene27560 | 0.84561 | 3.65E-59 | -1.69E-46 |
MS.gene059717 | MS.gene27560 | -0.809253 | 2.07E-50 | -1.69E-46 |
MS.gene059905 | MS.gene27560 | 0.841418 | 4.81E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27560.t1 | MTR_7g074935 | 97.904 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 0.0 | 667 |
MS.gene27560.t1 | MTR_8g036160 | 69.916 | 359 | 81 | 8 | 1 | 334 | 1 | 357 | 1.20e-151 | 430 |
MS.gene27560.t1 | MTR_4g101990 | 54.701 | 351 | 119 | 11 | 1 | 332 | 1 | 330 | 6.51e-78 | 241 |
MS.gene27560.t1 | MTR_1g076710 | 48.214 | 336 | 127 | 11 | 1 | 315 | 1 | 310 | 4.28e-77 | 240 |
MS.gene27560.t1 | MTR_1g061530 | 42.581 | 310 | 129 | 10 | 60 | 333 | 65 | 361 | 3.10e-64 | 207 |
MS.gene27560.t1 | MTR_6g061670 | 45.788 | 273 | 123 | 5 | 1 | 263 | 1 | 258 | 4.48e-58 | 190 |
MS.gene27560.t1 | MTR_6g061670 | 45.390 | 282 | 116 | 8 | 1 | 263 | 1 | 263 | 2.83e-57 | 188 |
MS.gene27560.t1 | MTR_5g011680 | 43.682 | 277 | 109 | 9 | 15 | 253 | 4 | 271 | 6.71e-54 | 179 |
MS.gene27560.t1 | MTR_5g010330 | 45.175 | 228 | 112 | 5 | 58 | 278 | 68 | 289 | 1.21e-52 | 176 |
MS.gene27560.t1 | MTR_8g031100 | 47.137 | 227 | 111 | 2 | 60 | 278 | 89 | 314 | 3.11e-52 | 176 |
MS.gene27560.t1 | MTR_8g098390 | 45.455 | 231 | 109 | 5 | 59 | 278 | 96 | 320 | 2.64e-49 | 168 |
MS.gene27560.t1 | MTR_7g077120 | 45.022 | 231 | 119 | 2 | 56 | 278 | 85 | 315 | 7.44e-49 | 167 |
MS.gene27560.t1 | MTR_5g011620 | 45.255 | 274 | 124 | 10 | 15 | 280 | 4 | 259 | 1.79e-48 | 173 |
MS.gene27560.t1 | MTR_4g098460 | 53.103 | 145 | 61 | 2 | 99 | 243 | 59 | 196 | 7.60e-40 | 142 |
MS.gene27560.t1 | MTR_5g011610 | 54.088 | 159 | 62 | 5 | 124 | 280 | 53 | 202 | 1.23e-39 | 142 |
MS.gene27560.t1 | MTR_5g011610 | 54.369 | 103 | 44 | 1 | 119 | 221 | 204 | 303 | 5.97e-26 | 105 |
MS.gene27560.t1 | MTR_1g038960 | 43.810 | 210 | 105 | 7 | 38 | 242 | 62 | 263 | 1.61e-37 | 137 |
MS.gene27560.t1 | MTR_4g098460 | 51.333 | 150 | 61 | 3 | 99 | 243 | 59 | 201 | 1.89e-37 | 135 |
MS.gene27560.t1 | MTR_4g055803 | 41.748 | 206 | 113 | 5 | 51 | 251 | 51 | 254 | 3.24e-37 | 138 |
MS.gene27560.t1 | MTR_1g079780 | 40.260 | 231 | 131 | 5 | 60 | 287 | 43 | 269 | 5.12e-36 | 133 |
MS.gene27560.t1 | MTR_4g055833 | 40.284 | 211 | 119 | 5 | 46 | 251 | 43 | 251 | 1.01e-35 | 132 |
MS.gene27560.t1 | MTR_7g116320 | 44.792 | 192 | 101 | 3 | 60 | 249 | 74 | 262 | 1.19e-34 | 130 |
MS.gene27560.t1 | MTR_4g055813 | 49.265 | 136 | 64 | 3 | 119 | 251 | 11 | 144 | 2.34e-33 | 125 |
MS.gene27560.t1 | MTR_6g060670 | 42.574 | 202 | 99 | 7 | 60 | 260 | 120 | 305 | 4.69e-33 | 124 |
MS.gene27560.t1 | MTR_5g014360 | 45.026 | 191 | 84 | 7 | 63 | 242 | 123 | 303 | 5.46e-32 | 123 |
MS.gene27560.t1 | MTR_7g116320 | 44.505 | 182 | 96 | 3 | 60 | 239 | 74 | 252 | 1.27e-31 | 120 |
MS.gene27560.t1 | MTR_5g013390 | 38.073 | 218 | 116 | 9 | 57 | 262 | 78 | 288 | 9.92e-30 | 116 |
MS.gene27560.t1 | MTR_1g038990 | 39.572 | 187 | 90 | 6 | 57 | 242 | 79 | 243 | 1.18e-27 | 110 |
MS.gene27560.t1 | MTR_4g055705 | 32.099 | 243 | 130 | 6 | 27 | 241 | 19 | 254 | 2.13e-25 | 103 |
MS.gene27560.t1 | MTR_5g041430 | 37.838 | 185 | 99 | 7 | 59 | 238 | 49 | 222 | 6.96e-24 | 100 |
MS.gene27560.t1 | MTR_3g023560 | 42.975 | 121 | 63 | 2 | 125 | 242 | 60 | 177 | 7.29e-23 | 96.3 |
MS.gene27560.t1 | MTR_3g100470 | 40.000 | 115 | 68 | 1 | 129 | 242 | 103 | 217 | 1.53e-21 | 93.2 |
MS.gene27560.t1 | MTR_3g116100 | 35.484 | 186 | 106 | 5 | 107 | 289 | 130 | 304 | 3.39e-20 | 90.1 |
MS.gene27560.t1 | MTR_3g068035 | 43.363 | 113 | 61 | 1 | 130 | 242 | 109 | 218 | 4.41e-20 | 89.4 |
MS.gene27560.t1 | MTR_5g066020 | 40.517 | 116 | 65 | 3 | 129 | 242 | 82 | 195 | 7.52e-20 | 87.8 |
MS.gene27560.t1 | MTR_5g011700 | 47.170 | 106 | 52 | 2 | 138 | 242 | 10 | 112 | 9.55e-19 | 83.2 |
MS.gene27560.t1 | MTR_5g091630 | 32.995 | 197 | 89 | 3 | 47 | 243 | 34 | 187 | 7.54e-18 | 82.0 |
MS.gene27560.t1 | MTR_8g036060 | 46.903 | 113 | 57 | 1 | 130 | 242 | 116 | 225 | 4.15e-17 | 80.9 |
MS.gene27560.t1 | MTR_4g098450 | 45.614 | 114 | 57 | 2 | 130 | 242 | 106 | 215 | 4.60e-17 | 80.5 |
MS.gene27560.t1 | MTR_7g080980 | 52.239 | 67 | 32 | 0 | 130 | 196 | 87 | 153 | 6.02e-17 | 79.7 |
MS.gene27560.t1 | MTR_1g073860 | 43.363 | 113 | 61 | 1 | 130 | 242 | 124 | 233 | 2.47e-16 | 79.0 |
MS.gene27560.t1 | MTR_5g011520 | 43.363 | 113 | 61 | 1 | 130 | 242 | 130 | 239 | 2.64e-16 | 79.0 |
MS.gene27560.t1 | MTR_1g044155 | 41.593 | 113 | 63 | 1 | 130 | 242 | 156 | 265 | 2.95e-16 | 79.0 |
MS.gene27560.t1 | MTR_1g079810 | 44.248 | 113 | 60 | 1 | 130 | 242 | 104 | 213 | 2.91e-15 | 75.5 |
MS.gene27560.t1 | MTR_5g011600 | 37.121 | 132 | 56 | 3 | 179 | 310 | 3 | 107 | 4.10e-14 | 68.6 |
MS.gene27560.t1 | MTR_5g080580 | 40.179 | 112 | 64 | 1 | 131 | 242 | 120 | 228 | 8.19e-14 | 71.6 |
MS.gene27560.t1 | MTR_5g011590 | 38.793 | 116 | 53 | 3 | 69 | 184 | 42 | 139 | 1.07e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27560.t1 | AT4G12080 | 56.811 | 301 | 91 | 8 | 6 | 269 | 17 | 315 | 1.63e-96 | 290 |
MS.gene27560.t1 | AT4G22770 | 59.206 | 277 | 88 | 10 | 6 | 261 | 13 | 285 | 4.34e-79 | 245 |
MS.gene27560.t1 | AT4G22770 | 59.206 | 277 | 88 | 10 | 6 | 261 | 13 | 285 | 4.34e-79 | 245 |
MS.gene27560.t1 | AT4G25320 | 56.757 | 222 | 76 | 3 | 48 | 250 | 69 | 289 | 1.50e-76 | 241 |
MS.gene27560.t1 | AT4G00200 | 52.711 | 332 | 116 | 11 | 14 | 332 | 13 | 316 | 1.16e-75 | 235 |
MS.gene27560.t1 | AT4G00200 | 52.711 | 332 | 116 | 11 | 14 | 332 | 13 | 316 | 1.16e-75 | 235 |
MS.gene27560.t1 | AT5G62260 | 57.075 | 212 | 74 | 4 | 60 | 254 | 76 | 287 | 2.67e-69 | 222 |
MS.gene27560.t1 | AT5G62260 | 57.075 | 212 | 74 | 4 | 60 | 254 | 76 | 287 | 2.67e-69 | 222 |
MS.gene27560.t1 | AT5G51590 | 55.251 | 219 | 63 | 3 | 59 | 243 | 77 | 294 | 3.97e-67 | 217 |
MS.gene27560.t1 | AT5G62260 | 54.460 | 213 | 79 | 5 | 60 | 254 | 76 | 288 | 1.34e-64 | 206 |
MS.gene27560.t1 | AT2G33620 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.02e-64 | 207 |
MS.gene27560.t1 | AT2G33620 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.02e-64 | 207 |
MS.gene27560.t1 | AT2G33620 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.02e-64 | 207 |
MS.gene27560.t1 | AT2G33620 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.02e-64 | 207 |
MS.gene27560.t1 | AT2G45850 | 49.761 | 209 | 98 | 3 | 59 | 266 | 97 | 299 | 3.26e-53 | 179 |
MS.gene27560.t1 | AT2G45850 | 49.761 | 209 | 98 | 3 | 59 | 266 | 97 | 299 | 3.26e-53 | 179 |
MS.gene27560.t1 | AT1G63470 | 49.738 | 191 | 88 | 3 | 59 | 243 | 104 | 292 | 1.80e-51 | 175 |
MS.gene27560.t1 | AT3G61310 | 52.688 | 186 | 84 | 2 | 58 | 243 | 99 | 280 | 9.36e-51 | 172 |
MS.gene27560.t1 | AT4G17950 | 43.966 | 232 | 95 | 5 | 50 | 251 | 121 | 347 | 8.35e-50 | 172 |
MS.gene27560.t1 | AT2G45850 | 50.543 | 184 | 88 | 1 | 59 | 242 | 97 | 277 | 3.57e-49 | 166 |
MS.gene27560.t1 | AT5G46640 | 47.619 | 231 | 84 | 7 | 49 | 256 | 87 | 303 | 1.62e-46 | 162 |
MS.gene27560.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27560.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27560.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27560.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27560.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27560.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 98 | 275 | 5.52e-45 | 157 |
MS.gene27560.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 98 | 275 | 5.52e-45 | 157 |
MS.gene27560.t1 | AT3G04590 | 44.271 | 192 | 101 | 4 | 59 | 249 | 104 | 290 | 6.90e-39 | 140 |
MS.gene27560.t1 | AT3G04590 | 43.284 | 201 | 108 | 4 | 59 | 258 | 104 | 299 | 1.08e-37 | 139 |
MS.gene27560.t1 | AT2G36560 | 39.310 | 145 | 85 | 3 | 124 | 265 | 102 | 246 | 3.51e-24 | 103 |
MS.gene27560.t1 | AT5G49700 | 36.090 | 133 | 74 | 3 | 129 | 250 | 85 | 217 | 6.40e-20 | 88.6 |
MS.gene27560.t1 | AT3G60870 | 39.655 | 116 | 65 | 2 | 127 | 242 | 86 | 196 | 9.08e-20 | 87.8 |
MS.gene27560.t1 | AT1G14490 | 35.185 | 162 | 93 | 4 | 101 | 251 | 5 | 165 | 1.76e-19 | 85.5 |
MS.gene27560.t1 | AT1G14490 | 35.000 | 180 | 100 | 5 | 83 | 251 | 11 | 184 | 1.90e-19 | 85.9 |
MS.gene27560.t1 | AT3G55560 | 41.228 | 114 | 65 | 1 | 130 | 243 | 118 | 229 | 3.26e-17 | 81.3 |
MS.gene27560.t1 | AT5G28590 | 35.897 | 156 | 69 | 3 | 123 | 271 | 26 | 157 | 1.24e-16 | 78.2 |
MS.gene27560.t1 | AT2G42940 | 43.750 | 112 | 60 | 1 | 132 | 243 | 85 | 193 | 3.90e-16 | 77.4 |
MS.gene27560.t1 | AT1G76500 | 36.066 | 122 | 66 | 2 | 130 | 242 | 102 | 220 | 3.80e-15 | 75.5 |
MS.gene27560.t1 | AT2G35270 | 37.879 | 132 | 70 | 3 | 130 | 253 | 108 | 235 | 5.31e-15 | 74.7 |
MS.gene27560.t1 | AT4G17800 | 47.761 | 67 | 35 | 0 | 130 | 196 | 112 | 178 | 7.01e-15 | 74.3 |
MS.gene27560.t1 | AT4G14465 | 43.284 | 67 | 38 | 0 | 130 | 196 | 97 | 163 | 7.81e-15 | 73.9 |
MS.gene27560.t1 | AT2G45430 | 39.850 | 133 | 66 | 3 | 130 | 251 | 119 | 248 | 1.24e-13 | 70.9 |
MS.gene27560.t1 | AT4G22810 | 36.496 | 137 | 79 | 3 | 130 | 263 | 135 | 266 | 1.49e-13 | 70.9 |
MS.gene27560.t1 | AT4G12050 | 37.313 | 134 | 78 | 3 | 130 | 262 | 148 | 276 | 6.52e-13 | 68.9 |
MS.gene27560.t1 | AT3G04570 | 38.843 | 121 | 63 | 2 | 130 | 242 | 110 | 227 | 6.62e-13 | 68.9 |
MS.gene27560.t1 | AT4G35390 | 39.130 | 115 | 65 | 2 | 130 | 242 | 93 | 204 | 4.77e-12 | 66.2 |
Find 102 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGCCTTTCGCCGAGAAAAC+TGG | 0.203722 | 7.2:+30595511 | MS.gene27560:CDS |
GGTGATGCATAATCAGATTT+TGG | 0.214232 | 7.2:-30595363 | None:intergenic |
TGGCGTATCACCGGTGAGTC+TGG | 0.247011 | 7.2:+30593626 | MS.gene27560:CDS |
GATTATCATCTTTAATTATC+AGG | 0.247738 | 7.2:-30595594 | None:intergenic |
CTTCGGTTTCCCCTGCTTCC+CGG | 0.257402 | 7.2:-30593781 | None:intergenic |
TTCTGGTCTTGTTGGTTACT+TGG | 0.258958 | 7.2:-30595330 | None:intergenic |
AGGGGTAGACCAAGGAAATA+TGG | 0.299572 | 7.2:+30593678 | MS.gene27560:CDS |
GATGAAAATTCATTAGAAAA+AGG | 0.314880 | 7.2:-30593759 | None:intergenic |
CTTCGTCAGCCTGATTCTTC+TGG | 0.325349 | 7.2:+30594338 | MS.gene27560:CDS |
GTCGTAGGCGGTGGAGTTGC+CGG | 0.328102 | 7.2:+30594781 | MS.gene27560:CDS |
CATGTAACTGTTCCTGAATC+TGG | 0.348264 | 7.2:+30593591 | MS.gene27560:CDS |
AGGTTTGAGTTTAATGTTCC+CGG | 0.369334 | 7.2:-30595477 | None:intergenic |
CAGACCGGCTTCTTGTTCCT+TGG | 0.373154 | 7.2:-30594720 | None:intergenic |
TGGGTTGGAGCTTCACTCCT+TGG | 0.378803 | 7.2:-30593567 | None:intergenic |
TTTGAGATACTTTCACTGTC+TGG | 0.394509 | 7.2:+30594676 | MS.gene27560:CDS |
AGAGCCACATTACCAGATTC+AGG | 0.396775 | 7.2:-30593603 | None:intergenic |
GTTGCAGCTTTCATTGAGTC+TGG | 0.409280 | 7.2:-30595552 | None:intergenic |
GAGGAACAATTAAGAAGAAA+AGG | 0.421117 | 7.2:+30593658 | MS.gene27560:CDS |
GCATACCTCGCCTGCATTGA+CGG | 0.421805 | 7.2:-30594116 | None:intergenic |
AGGAACAATTAAGAAGAAAA+GGG | 0.426921 | 7.2:+30593659 | MS.gene27560:CDS |
TGCTTGAACTCCATCCCCTT+CGG | 0.429863 | 7.2:-30593798 | None:intergenic |
TGGACATCTACTGCAAAATC+CGG | 0.432504 | 7.2:+30595458 | MS.gene27560:CDS |
GCTTCTTGTTCCTTGGTTGT+CGG | 0.436064 | 7.2:-30594713 | None:intergenic |
CCGTCTGGCCCATATTTCCT+TGG | 0.437334 | 7.2:-30593687 | None:intergenic |
TTCAGGAACAGTTACATGTT+GGG | 0.439234 | 7.2:-30593586 | None:intergenic |
GGTGCTGAATACACTGCAAT+AGG | 0.440699 | 7.2:-30595399 | None:intergenic |
AAAGTTCCGCCAGAAGAATC+AGG | 0.448010 | 7.2:-30594347 | None:intergenic |
AGCTCCATCAACTTATCATA+TGG | 0.455470 | 7.2:+30593542 | MS.gene27560:CDS |
CAAGGAACAAGAAGCCGGTC+TGG | 0.455999 | 7.2:+30594721 | MS.gene27560:CDS |
ACTCTTTCACCATTGGTTGA+AGG | 0.464058 | 7.2:-30595423 | None:intergenic |
TACATCAACTCTTTCACCAT+TGG | 0.465815 | 7.2:-30595430 | None:intergenic |
TGTAGCTGCCACTCCTGTGC+AGG | 0.467741 | 7.2:+30594810 | MS.gene27560:CDS |
TAGTTTGATATTTGCATGGA+GGG | 0.470634 | 7.2:+30593477 | None:intergenic |
TCGCGGTCCTTGTTGCGAAA+AGG | 0.476324 | 7.2:-30594270 | None:intergenic |
GTTTCAGGACATTACAATGA+AGG | 0.478893 | 7.2:+30594241 | MS.gene27560:intron |
GATGGTCGTGTCGTAGGCGG+TGG | 0.481762 | 7.2:+30594772 | MS.gene27560:CDS |
GGCGTATCACCGGTGAGTCT+GGG | 0.485528 | 7.2:+30593627 | MS.gene27560:CDS |
AAAGGAGCTGAAGACGAGAT+TGG | 0.485690 | 7.2:-30593741 | None:intergenic |
AAATCACGCCACTAGCAGAT+AGG | 0.488464 | 7.2:-30594304 | None:intergenic |
CTTGTTCCTTGGTTGTCGGT+AGG | 0.489709 | 7.2:-30594709 | None:intergenic |
CGGGAAGCAGGGGAAACCGA+AGG | 0.493245 | 7.2:+30593782 | MS.gene27560:CDS |
AACACTGGAGTAACAGTGAT+AGG | 0.495781 | 7.2:+30593513 | MS.gene27560:CDS |
TCGGCGAAAGGCCGAGGGAG+AGG | 0.505477 | 7.2:-30595502 | None:intergenic |
TGTTACTTCTGAAGGCGACT+CGG | 0.506864 | 7.2:+30594063 | MS.gene27560:intron |
GCAGGGGAAACCGAAGGGGA+TGG | 0.507174 | 7.2:+30593788 | MS.gene27560:CDS |
TGGCGGAACTTTGACCTATG+AGG | 0.508265 | 7.2:+30594358 | MS.gene27560:CDS |
CATATCATTACCGTCAATGC+AGG | 0.510031 | 7.2:+30594106 | MS.gene27560:CDS |
GGGAAGCAGGGGAAACCGAA+GGG | 0.513646 | 7.2:+30593783 | MS.gene27560:CDS |
ACAGCAGTAACCGACCCGTC+TGG | 0.517634 | 7.2:-30593702 | None:intergenic |
GGGGTAGACCAAGGAAATAT+GGG | 0.519638 | 7.2:+30593679 | MS.gene27560:CDS |
TGAGAAATATTTACCTGCAC+AGG | 0.521667 | 7.2:-30594823 | None:intergenic |
AATGATATGCGGCATAAAGT+TGG | 0.521723 | 7.2:-30594092 | None:intergenic |
GGCCTTTCGCCGAGAAAACT+GGG | 0.523333 | 7.2:+30595512 | MS.gene27560:CDS |
CAAGGAAATATGGGCCAGAC+GGG | 0.524549 | 7.2:+30593688 | MS.gene27560:CDS |
AAGAACCAGAATCACCTCAT+AGG | 0.526234 | 7.2:-30594372 | None:intergenic |
GGAACAGTTACATGTTGGGT+TGG | 0.529114 | 7.2:-30593582 | None:intergenic |
AGTCCTGATGGTCGTGTCGT+AGG | 0.531638 | 7.2:+30594766 | MS.gene27560:CDS |
TGAATACACTGCAATAGGTT+CGG | 0.535826 | 7.2:-30595394 | None:intergenic |
CCGCCTACGACACGACCATC+AGG | 0.536498 | 7.2:-30594769 | None:intergenic |
GAATCTGGTAATGTGGCTCT+TGG | 0.538430 | 7.2:+30593606 | MS.gene27560:CDS |
ATTTGCATGGAGGGGAGAGA+AGG | 0.539913 | 7.2:+30593486 | None:intergenic |
CTTTCACCATTGGTTGAAGG+TGG | 0.540540 | 7.2:-30595420 | None:intergenic |
CTCAAACCTTACCTCTCCCT+CGG | 0.547245 | 7.2:+30595491 | MS.gene27560:CDS |
TGTGGCTCTTGGCGTATCAC+CGG | 0.547331 | 7.2:+30593617 | MS.gene27560:CDS |
CCGGTGAGTCTGGGAATGGA+TGG | 0.548781 | 7.2:+30593636 | MS.gene27560:CDS |
CCATCCATTCCCAGACTCAC+CGG | 0.548795 | 7.2:-30593636 | None:intergenic |
ATTCAGGAACAGTTACATGT+TGG | 0.551299 | 7.2:-30593587 | None:intergenic |
GTTTCTTTGTCAAGTCCTGA+TGG | 0.553718 | 7.2:+30594754 | MS.gene27560:CDS |
AGCTTTCATTGAGTCTGGCA+TGG | 0.553939 | 7.2:-30595547 | None:intergenic |
CGTCAGCCTGATTCTTCTGG+CGG | 0.554405 | 7.2:+30594341 | MS.gene27560:CDS |
GGTGCCATATGATAAGTTGA+TGG | 0.559304 | 7.2:-30593546 | None:intergenic |
AAAGCTGGAGCTGATCCTCT+AGG | 0.560051 | 7.2:+30593828 | MS.gene27560:CDS |
GGAACAAGAAGCCGGTCTGG+TGG | 0.561728 | 7.2:+30594724 | MS.gene27560:CDS |
AGTTTGATATTTGCATGGAG+GGG | 0.566173 | 7.2:+30593478 | None:intergenic |
GAAATATGGGCCAGACGGGT+CGG | 0.566885 | 7.2:+30593692 | MS.gene27560:CDS |
ATCACCGGTGAGTCTGGGAA+TGG | 0.570415 | 7.2:+30593632 | MS.gene27560:CDS |
ACTTCTGAAGGCGACTCGGT+CGG | 0.572449 | 7.2:+30594067 | MS.gene27560:intron |
GGAACAATTAAGAAGAAAAG+GGG | 0.574284 | 7.2:+30593660 | MS.gene27560:CDS |
CCAAGGAAATATGGGCCAGA+CGG | 0.576724 | 7.2:+30593687 | MS.gene27560:CDS |
GCAATAGGTTCGGTAACAGT+AGG | 0.585437 | 7.2:-30595384 | None:intergenic |
GCTGAAGACGAGATTGGCAA+TGG | 0.587359 | 7.2:-30593735 | None:intergenic |
GGACATCTACTGCAAAATCC+GGG | 0.588867 | 7.2:+30595459 | MS.gene27560:CDS |
AGACGGGTCGGTTACTGCTG+TGG | 0.589790 | 7.2:+30593704 | MS.gene27560:CDS |
AGTGGCAGCTACAAGAAGAC+CGG | 0.591724 | 7.2:-30594800 | None:intergenic |
AATATTTACCTGCACAGGAG+TGG | 0.592423 | 7.2:-30594818 | None:intergenic |
CCTGATGGTCGTGTCGTAGG+CGG | 0.605547 | 7.2:+30594769 | MS.gene27560:CDS |
TGTTCCTGAATCTGGTAATG+TGG | 0.613189 | 7.2:+30593599 | MS.gene27560:CDS |
AAACACTCATTCCACCAGAC+CGG | 0.616190 | 7.2:-30594735 | None:intergenic |
GAAAGGCCGAGGGAGAGGTA+AGG | 0.616644 | 7.2:-30595497 | None:intergenic |
GGAAGCAGGGGAAACCGAAG+GGG | 0.617839 | 7.2:+30593784 | MS.gene27560:CDS |
GGGAGAGAAGGTAACAACAC+TGG | 0.626647 | 7.2:+30593498 | MS.gene27560:CDS |
ACAACCAAGGAACAAGAAGC+CGG | 0.627528 | 7.2:+30594716 | MS.gene27560:CDS |
ATATGCATCCTATCTGCTAG+TGG | 0.629472 | 7.2:+30594296 | MS.gene27560:CDS |
GTGAGTCTGGGAATGGATGG+AGG | 0.638692 | 7.2:+30593639 | MS.gene27560:CDS |
TCAGCACCACCTTCAACCAA+TGG | 0.641195 | 7.2:+30595414 | MS.gene27560:CDS |
AGAAGAAAAGGGGTAGACCA+AGG | 0.648040 | 7.2:+30593670 | MS.gene27560:CDS |
GAAAGAGTTGATGTAATGAG+TGG | 0.657296 | 7.2:+30595438 | MS.gene27560:CDS |
CATTACCGTCAATGCAGGCG+AGG | 0.657493 | 7.2:+30594111 | MS.gene27560:CDS |
GCATTGACGGTAATGATATG+CGG | 0.675288 | 7.2:-30594103 | None:intergenic |
CAACTTATCATATGGCACCA+AGG | 0.682724 | 7.2:+30593550 | MS.gene27560:CDS |
GATAGGATGCATATAGCTCG+CGG | 0.699011 | 7.2:-30594287 | None:intergenic |
TTCATGCCTACCGACAACCA+AGG | 0.742195 | 7.2:+30594703 | MS.gene27560:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATTTACATCTTTAATAT+CGG | + | chr7.2:30594418-30594437 | MS.gene27560:intron | 10.0% |
!!! | ATTATATTATGTATTTTATC+AGG | + | chr7.2:30595287-30595306 | MS.gene27560:intron | 10.0% |
!! | CATAATATAATGTATTTGTT+AGG | - | chr7.2:30595278-30595297 | None:intergenic | 15.0% |
!!! | TTTTCATTTTCATTGATTAT+TGG | + | chr7.2:30594594-30594613 | MS.gene27560:intron | 15.0% |
!! | AACTACTAACTTACTAATAT+TGG | - | chr7.2:30593905-30593924 | None:intergenic | 20.0% |
!! | ATCTAATGTTAATTCTTCTT+TGG | + | chr7.2:30594175-30594194 | MS.gene27560:intron | 20.0% |
!! | GATGAAAATTCATTAGAAAA+AGG | - | chr7.2:30593762-30593781 | None:intergenic | 20.0% |
!! | TCAATGAAAATGAAAAACTA+TGG | - | chr7.2:30594590-30594609 | None:intergenic | 20.0% |
!! | TCATATAACTGTTTATGTAT+AGG | - | chr7.2:30595231-30595250 | None:intergenic | 20.0% |
!! | TCTAATGTTAATTCTTCTTT+GGG | + | chr7.2:30594176-30594195 | MS.gene27560:intron | 20.0% |
!! | TTATCTTTAGTACCATAATA+AGG | - | chr7.2:30594855-30594874 | None:intergenic | 20.0% |
!!! | ACATAACTTTTATCTACTTA+AGG | + | chr7.2:30595000-30595019 | MS.gene27560:intron | 20.0% |
!!! | ATATTATGTATTTTATCAGG+TGG | + | chr7.2:30595290-30595309 | MS.gene27560:intron | 20.0% |
!!! | ATTTTGGTTTCTTTATTTTC+TGG | - | chr7.2:30595350-30595369 | None:intergenic | 20.0% |
!!! | TTTTCTAATGAATTTTCATC+CGG | + | chr7.2:30593762-30593781 | MS.gene27560:CDS | 20.0% |
! | AAATAGTTGAAAACAGCTTA+TGG | - | chr7.2:30595119-30595138 | None:intergenic | 25.0% |
! | AATCTTCAATGTGTAGTATA+CGG | + | chr7.2:30594946-30594965 | MS.gene27560:intron | 25.0% |
! | AGGAACAATTAAGAAGAAAA+GGG | + | chr7.2:30593659-30593678 | MS.gene27560:CDS | 25.0% |
! | ATCAAATCAAAAATACCTAG+AGG | - | chr7.2:30593846-30593865 | None:intergenic | 25.0% |
! | TTAGTACCATAATAAGGATA+GGG | - | chr7.2:30594849-30594868 | None:intergenic | 25.0% |
! | TTATTTGAACTTACTACTAC+TGG | + | chr7.2:30595038-30595057 | MS.gene27560:intron | 25.0% |
! | TTTAGTACCATAATAAGGAT+AGG | - | chr7.2:30594850-30594869 | None:intergenic | 25.0% |
!! | TTTCTAATGAATTTTCATCC+GGG | + | chr7.2:30593763-30593782 | MS.gene27560:CDS | 25.0% |
!!! | ACATAATTTTGTTGTATGCT+AGG | - | chr7.2:30594028-30594047 | None:intergenic | 25.0% |
!!! | AGTAGTTAAGTTAGTTTTCA+GGG | + | chr7.2:30593918-30593937 | MS.gene27560:intron | 25.0% |
!!! | GGTATGAATTTTGTTTTGAT+TGG | + | chr7.2:30594615-30594634 | MS.gene27560:intron | 25.0% |
!!! | TAGTAGTTAAGTTAGTTTTC+AGG | + | chr7.2:30593917-30593936 | MS.gene27560:intron | 25.0% |
AGATAAAAGTTATGTCGAAC+TGG | - | chr7.2:30594995-30595014 | None:intergenic | 30.0% | |
ATGAATGTTGAACTTATACG+AGG | - | chr7.2:30594560-30594579 | None:intergenic | 30.0% | |
GAAGTAACAACAATAGTTAG+TGG | - | chr7.2:30594052-30594071 | None:intergenic | 30.0% | |
GAGGAACAATTAAGAAGAAA+AGG | + | chr7.2:30593658-30593677 | MS.gene27560:CDS | 30.0% | |
GGAACAATTAAGAAGAAAAG+GGG | + | chr7.2:30593660-30593679 | MS.gene27560:CDS | 30.0% | |
GTATAAGTTCAACATTCATG+TGG | + | chr7.2:30594561-30594580 | MS.gene27560:intron | 30.0% | |
TTATCTACTTAAGGACTGTT+TGG | + | chr7.2:30595009-30595028 | MS.gene27560:intron | 30.0% | |
! | ACTATTGTTGTTACTTCTGA+AGG | + | chr7.2:30594055-30594074 | MS.gene27560:intron | 30.0% |
! | ATGTTTCATTTTATCCCCTA+GGG | + | chr7.2:30594649-30594668 | MS.gene27560:intron | 30.0% |
!! | TCATGTACACTCATTTTTGT+CGG | + | chr7.2:30594875-30594894 | MS.gene27560:intron | 30.0% |
!!! | CTTTACTCTTTTGTTGTTTC+AGG | + | chr7.2:30594226-30594245 | MS.gene27560:intron | 30.0% |
!!! | TCTTTATTTTCTGGTCTTGT+TGG | - | chr7.2:30595341-30595360 | None:intergenic | 30.0% |
AAACCTCTGTCACACAAAAT+AGG | + | chr7.2:30594455-30594474 | MS.gene27560:intron | 35.0% | |
AACTTCAAGCAACATTCATG+TGG | + | chr7.2:30594509-30594528 | MS.gene27560:intron | 35.0% | |
AATGATATGCGGCATAAAGT+TGG | - | chr7.2:30594095-30594114 | None:intergenic | 35.0% | |
ACACAAAATAGGACTTCGTT+CGG | + | chr7.2:30594466-30594485 | MS.gene27560:intron | 35.0% | |
AGCTCCATCAACTTATCATA+TGG | + | chr7.2:30593542-30593561 | MS.gene27560:CDS | 35.0% | |
ATTCAGGAACAGTTACATGT+TGG | - | chr7.2:30593590-30593609 | None:intergenic | 35.0% | |
GGTTAGTAAGATTGTACTCA+CGG | + | chr7.2:30594922-30594941 | MS.gene27560:intron | 35.0% | |
GTTTCAGGACATTACAATGA+AGG | + | chr7.2:30594241-30594260 | MS.gene27560:intron | 35.0% | |
TACATCAACTCTTTCACCAT+TGG | - | chr7.2:30595433-30595452 | None:intergenic | 35.0% | |
TGAATACACTGCAATAGGTT+CGG | - | chr7.2:30595397-30595416 | None:intergenic | 35.0% | |
TGAGAAATATTTACCTGCAC+AGG | - | chr7.2:30594826-30594845 | None:intergenic | 35.0% | |
TTCAGGAACAGTTACATGTT+GGG | - | chr7.2:30593589-30593608 | None:intergenic | 35.0% | |
TTCTCACCCTATCCTTATTA+TGG | + | chr7.2:30594840-30594859 | MS.gene27560:intron | 35.0% | |
! | AGGTTTGAGTTTAATGTTCC+CGG | - | chr7.2:30595480-30595499 | None:intergenic | 35.0% |
! | CATGTTTCATTTTATCCCCT+AGG | + | chr7.2:30594648-30594667 | MS.gene27560:intron | 35.0% |
! | GGTGATGCATAATCAGATTT+TGG | - | chr7.2:30595366-30595385 | None:intergenic | 35.0% |
! | GTATTTTATCAGGTGGTTGT+TGG | + | chr7.2:30595297-30595316 | MS.gene27560:intron | 35.0% |
! | GTTATATCCTTTTCGCAACA+AGG | + | chr7.2:30594263-30594282 | MS.gene27560:CDS | 35.0% |
! | TTTGAGATACTTTCACTGTC+TGG | + | chr7.2:30594676-30594695 | MS.gene27560:CDS | 35.0% |
!! | ACACTAAAAGTGTTTCAAGG+AGG | - | chr7.2:30593957-30593976 | None:intergenic | 35.0% |
!! | CACTAAAAGTGTTTCAAGGA+GGG | - | chr7.2:30593956-30593975 | None:intergenic | 35.0% |
!! | GAAAGAGTTGATGTAATGAG+TGG | + | chr7.2:30595438-30595457 | MS.gene27560:CDS | 35.0% |
!! | GTTGTTTTCATAAGCAATCC+TGG | - | chr7.2:30595153-30595172 | None:intergenic | 35.0% |
!! | TACACTCATTTTTGTCGGTA+GGG | + | chr7.2:30594880-30594899 | MS.gene27560:intron | 35.0% |
AACACTGGAGTAACAGTGAT+AGG | + | chr7.2:30593513-30593532 | MS.gene27560:CDS | 40.0% | |
AAGAACCAGAATCACCTCAT+AGG | - | chr7.2:30594375-30594394 | None:intergenic | 40.0% | |
AAGTACTTGTGAGCCTGTTT+GGG | + | chr7.2:30595064-30595083 | MS.gene27560:intron | 40.0% | |
AAGTATCTCAAAACGACCCT+AGG | - | chr7.2:30594668-30594687 | None:intergenic | 40.0% | |
AATATTTACCTGCACAGGAG+TGG | - | chr7.2:30594821-30594840 | None:intergenic | 40.0% | |
AGCCTGTTTGGGAGAATTTA+CGG | + | chr7.2:30595075-30595094 | MS.gene27560:intron | 40.0% | |
AGTATCTCAAAACGACCCTA+GGG | - | chr7.2:30594667-30594686 | None:intergenic | 40.0% | |
ATATGCATCCTATCTGCTAG+TGG | + | chr7.2:30594296-30594315 | MS.gene27560:CDS | 40.0% | |
CAACTTATCATATGGCACCA+AGG | + | chr7.2:30593550-30593569 | MS.gene27560:CDS | 40.0% | |
CATATCATTACCGTCAATGC+AGG | + | chr7.2:30594106-30594125 | MS.gene27560:CDS | 40.0% | |
CATGTAACTGTTCCTGAATC+TGG | + | chr7.2:30593591-30593610 | MS.gene27560:CDS | 40.0% | |
GTTTCTTTGTCAAGTCCTGA+TGG | + | chr7.2:30594754-30594773 | MS.gene27560:CDS | 40.0% | |
TAAGTACTTGTGAGCCTGTT+TGG | + | chr7.2:30595063-30595082 | MS.gene27560:intron | 40.0% | |
TGGACATCTACTGCAAAATC+CGG | + | chr7.2:30595458-30595477 | MS.gene27560:CDS | 40.0% | |
TTCAAGCAGTCGAAAAAAGC+TGG | + | chr7.2:30593813-30593832 | MS.gene27560:CDS | 40.0% | |
TTCCGTAAATTCTCCCAAAC+AGG | - | chr7.2:30595080-30595099 | None:intergenic | 40.0% | |
TTTGACCTATGAGGTGATTC+TGG | + | chr7.2:30594367-30594386 | MS.gene27560:intron | 40.0% | |
! | ACTCTTTCACCATTGGTTGA+AGG | - | chr7.2:30595426-30595445 | None:intergenic | 40.0% |
! | AGTCCTATTTTGTGTGACAG+AGG | - | chr7.2:30594461-30594480 | None:intergenic | 40.0% |
! | GCATGTTAACCCAGTTTTCT+CGG | - | chr7.2:30595524-30595543 | None:intergenic | 40.0% |
! | GCATTGACGGTAATGATATG+CGG | - | chr7.2:30594106-30594125 | None:intergenic | 40.0% |
! | GGTGCCATATGATAAGTTGA+TGG | - | chr7.2:30593549-30593568 | None:intergenic | 40.0% |
! | TGTTCCTGAATCTGGTAATG+TGG | + | chr7.2:30593599-30593618 | MS.gene27560:CDS | 40.0% |
! | TTTTGTCGGTAGGGTTTCAA+CGG | + | chr7.2:30594889-30594908 | MS.gene27560:intron | 40.0% |
!! | AGTTTTCAGGGTTTGAACAC+CGG | + | chr7.2:30593930-30593949 | MS.gene27560:intron | 40.0% |
!! | GGGACACTAAAAGTGTTTCA+AGG | - | chr7.2:30593960-30593979 | None:intergenic | 40.0% |
!! | GTACACTCATTTTTGTCGGT+AGG | + | chr7.2:30594879-30594898 | MS.gene27560:intron | 40.0% |
!! | TTCTGGTCTTGTTGGTTACT+TGG | - | chr7.2:30595333-30595352 | None:intergenic | 40.0% |
AAACACTCATTCCACCAGAC+CGG | - | chr7.2:30594738-30594757 | None:intergenic | 45.0% | |
AAAGGAGCTGAAGACGAGAT+TGG | - | chr7.2:30593744-30593763 | None:intergenic | 45.0% | |
AAAGTTCCGCCAGAAGAATC+AGG | - | chr7.2:30594350-30594369 | None:intergenic | 45.0% | |
AAATCACGCCACTAGCAGAT+AGG | - | chr7.2:30594307-30594326 | None:intergenic | 45.0% | |
AAGCAATCCTGGAGAGCTAA+CGG | - | chr7.2:30595142-30595161 | None:intergenic | 45.0% | |
ACAACCAAGGAACAAGAAGC+CGG | + | chr7.2:30594716-30594735 | MS.gene27560:CDS | 45.0% | |
AGAAGAAAAGGGGTAGACCA+AGG | + | chr7.2:30593670-30593689 | MS.gene27560:CDS | 45.0% | |
AGAGCCACATTACCAGATTC+AGG | - | chr7.2:30593606-30593625 | None:intergenic | 45.0% | |
AGCTTTCATTGAGTCTGGCA+TGG | - | chr7.2:30595550-30595569 | None:intergenic | 45.0% | |
AGGGGTAGACCAAGGAAATA+TGG | + | chr7.2:30593678-30593697 | MS.gene27560:CDS | 45.0% | |
GATAGGATGCATATAGCTCG+CGG | - | chr7.2:30594290-30594309 | None:intergenic | 45.0% | |
GCTTCTTGTTCCTTGGTTGT+CGG | - | chr7.2:30594716-30594735 | None:intergenic | 45.0% | |
GGAACAGTTACATGTTGGGT+TGG | - | chr7.2:30593585-30593604 | None:intergenic | 45.0% | |
GGACATCTACTGCAAAATCC+GGG | + | chr7.2:30595459-30595478 | MS.gene27560:CDS | 45.0% | |
GGGGTAGACCAAGGAAATAT+GGG | + | chr7.2:30593679-30593698 | MS.gene27560:CDS | 45.0% | |
GTATCTCAAAACGACCCTAG+GGG | - | chr7.2:30594666-30594685 | None:intergenic | 45.0% | |
GTTGCAGCTTTCATTGAGTC+TGG | - | chr7.2:30595555-30595574 | None:intergenic | 45.0% | |
TTTGTCGGTAGGGTTTCAAC+GGG | + | chr7.2:30594890-30594909 | MS.gene27560:intron | 45.0% | |
! | AATTTTCATCCGGGAAGCAG+GGG | + | chr7.2:30593772-30593791 | MS.gene27560:CDS | 45.0% |
! | ACTATTTCCGTTAGCTCTCC+AGG | + | chr7.2:30595132-30595151 | MS.gene27560:intron | 45.0% |
! | CTTTCACCATTGGTTGAAGG+TGG | - | chr7.2:30595423-30595442 | None:intergenic | 45.0% |
! | GAATCTGGTAATGTGGCTCT+TGG | + | chr7.2:30593606-30593625 | MS.gene27560:CDS | 45.0% |
! | GAATTTTCATCCGGGAAGCA+GGG | + | chr7.2:30593771-30593790 | MS.gene27560:CDS | 45.0% |
! | GCAATAGGTTCGGTAACAGT+AGG | - | chr7.2:30595387-30595406 | None:intergenic | 45.0% |
! | GGTGCTGAATACACTGCAAT+AGG | - | chr7.2:30595402-30595421 | None:intergenic | 45.0% |
! | TGAATTTTCATCCGGGAAGC+AGG | + | chr7.2:30593770-30593789 | MS.gene27560:CDS | 45.0% |
! | TGTTACTTCTGAAGGCGACT+CGG | + | chr7.2:30594063-30594082 | MS.gene27560:intron | 45.0% |
!! | AAAAGTGTTTCAAGGAGGGC+CGG | - | chr7.2:30593952-30593971 | None:intergenic | 45.0% |
AAAGCTGGAGCTGATCCTCT+AGG | + | chr7.2:30593828-30593847 | MS.gene27560:CDS | 50.0% | |
ACCATCCCTCGCAAATAGCT+CGG | - | chr7.2:30593995-30594014 | None:intergenic | 50.0% | |
AGTGGCAGCTACAAGAAGAC+CGG | - | chr7.2:30594803-30594822 | None:intergenic | 50.0% | |
ATAGCTCGGTTGGCAAGCTA+AGG | - | chr7.2:30593981-30594000 | None:intergenic | 50.0% | |
CAAGGAAATATGGGCCAGAC+GGG | + | chr7.2:30593688-30593707 | MS.gene27560:CDS | 50.0% | |
CCAAGGAAATATGGGCCAGA+CGG | + | chr7.2:30593687-30593706 | MS.gene27560:CDS | 50.0% | |
CTCAAACCTTACCTCTCCCT+CGG | + | chr7.2:30595491-30595510 | MS.gene27560:CDS | 50.0% | |
CTTCGTCAGCCTGATTCTTC+TGG | + | chr7.2:30594338-30594357 | MS.gene27560:CDS | 50.0% | |
CTTGTTCCTTGGTTGTCGGT+AGG | - | chr7.2:30594712-30594731 | None:intergenic | 50.0% | |
GCTGAAGACGAGATTGGCAA+TGG | - | chr7.2:30593738-30593757 | None:intergenic | 50.0% | |
GGGAGAGAAGGTAACAACAC+TGG | + | chr7.2:30593498-30593517 | MS.gene27560:CDS | 50.0% | |
TAGCTCGGTTGGCAAGCTAA+GGG | - | chr7.2:30593980-30593999 | None:intergenic | 50.0% | |
TCAGCACCACCTTCAACCAA+TGG | + | chr7.2:30595414-30595433 | MS.gene27560:CDS | 50.0% | |
TGCTTGAACTCCATCCCCTT+CGG | - | chr7.2:30593801-30593820 | None:intergenic | 50.0% | |
TGGCGGAACTTTGACCTATG+AGG | + | chr7.2:30594358-30594377 | MS.gene27560:CDS | 50.0% | |
TTCATGCCTACCGACAACCA+AGG | + | chr7.2:30594703-30594722 | MS.gene27560:CDS | 50.0% | |
TTGTCGGTAGGGTTTCAACG+GGG | + | chr7.2:30594891-30594910 | MS.gene27560:intron | 50.0% | |
! | AACCCAGTTTTCTCGGCGAA+AGG | - | chr7.2:30595517-30595536 | None:intergenic | 50.0% |
ACCGAGCTATTTGCGAGGGA+TGG | + | chr7.2:30593991-30594010 | MS.gene27560:intron | 55.0% | |
AGTCCTGATGGTCGTGTCGT+AGG | + | chr7.2:30594766-30594785 | MS.gene27560:CDS | 55.0% | |
ATCACCGGTGAGTCTGGGAA+TGG | + | chr7.2:30593632-30593651 | MS.gene27560:CDS | 55.0% | |
CAAGGAACAAGAAGCCGGTC+TGG | + | chr7.2:30594721-30594740 | MS.gene27560:CDS | 55.0% | |
CATTACCGTCAATGCAGGCG+AGG | + | chr7.2:30594111-30594130 | MS.gene27560:CDS | 55.0% | |
CCATCCATTCCCAGACTCAC+CGG | - | chr7.2:30593639-30593658 | None:intergenic | 55.0% | |
CCGTCTGGCCCATATTTCCT+TGG | - | chr7.2:30593690-30593709 | None:intergenic | 55.0% | |
CGTCAGCCTGATTCTTCTGG+CGG | + | chr7.2:30594341-30594360 | MS.gene27560:CDS | 55.0% | |
GAAATATGGGCCAGACGGGT+CGG | + | chr7.2:30593692-30593711 | MS.gene27560:CDS | 55.0% | |
GCATACCTCGCCTGCATTGA+CGG | - | chr7.2:30594119-30594138 | None:intergenic | 55.0% | |
GCCAACCGAGCTATTTGCGA+GGG | + | chr7.2:30593987-30594006 | MS.gene27560:intron | 55.0% | |
GGCCTTTCGCCGAGAAAACT+GGG | + | chr7.2:30595512-30595531 | MS.gene27560:CDS | 55.0% | |
GTGAGTCTGGGAATGGATGG+AGG | + | chr7.2:30593639-30593658 | MS.gene27560:CDS | 55.0% | |
TCCCTCGCAAATAGCTCGGT+TGG | - | chr7.2:30593991-30594010 | None:intergenic | 55.0% | |
TCGCGGTCCTTGTTGCGAAA+AGG | - | chr7.2:30594273-30594292 | None:intergenic | 55.0% | |
TGCCAACCGAGCTATTTGCG+AGG | + | chr7.2:30593986-30594005 | MS.gene27560:intron | 55.0% | |
TGTCGGTAGGGTTTCAACGG+GGG | + | chr7.2:30594892-30594911 | MS.gene27560:intron | 55.0% | |
TGTGGCTCTTGGCGTATCAC+CGG | + | chr7.2:30593617-30593636 | MS.gene27560:CDS | 55.0% | |
! | CAGACCGGCTTCTTGTTCCT+TGG | - | chr7.2:30594723-30594742 | None:intergenic | 55.0% |
! | TGGGTTGGAGCTTCACTCCT+TGG | - | chr7.2:30593570-30593589 | None:intergenic | 55.0% |
! | TTTTCTCGGCGAAAGGCCGA+GGG | - | chr7.2:30595510-30595529 | None:intergenic | 55.0% |
!! | ACTTCTGAAGGCGACTCGGT+CGG | + | chr7.2:30594067-30594086 | MS.gene27560:intron | 55.0% |
ACAGCAGTAACCGACCCGTC+TGG | - | chr7.2:30593705-30593724 | None:intergenic | 60.0% | |
AGACGGGTCGGTTACTGCTG+TGG | + | chr7.2:30593704-30593723 | MS.gene27560:CDS | 60.0% | |
CCGGTGAGTCTGGGAATGGA+TGG | + | chr7.2:30593636-30593655 | MS.gene27560:CDS | 60.0% | |
CCTGATGGTCGTGTCGTAGG+CGG | + | chr7.2:30594769-30594788 | MS.gene27560:CDS | 60.0% | |
CGGCCTTTCGCCGAGAAAAC+TGG | + | chr7.2:30595511-30595530 | MS.gene27560:CDS | 60.0% | |
CTTCGGTTTCCCCTGCTTCC+CGG | - | chr7.2:30593784-30593803 | None:intergenic | 60.0% | |
GAAAGGCCGAGGGAGAGGTA+AGG | - | chr7.2:30595500-30595519 | None:intergenic | 60.0% | |
GGAACAAGAAGCCGGTCTGG+TGG | + | chr7.2:30594724-30594743 | MS.gene27560:CDS | 60.0% | |
GGAAGCAGGGGAAACCGAAG+GGG | + | chr7.2:30593784-30593803 | MS.gene27560:CDS | 60.0% | |
GGCGTATCACCGGTGAGTCT+GGG | + | chr7.2:30593627-30593646 | MS.gene27560:CDS | 60.0% | |
GGGAAGCAGGGGAAACCGAA+GGG | + | chr7.2:30593783-30593802 | MS.gene27560:CDS | 60.0% | |
GGTTTCAACGGGGGACGAGT+TGG | + | chr7.2:30594901-30594920 | MS.gene27560:intron | 60.0% | |
TGGCGTATCACCGGTGAGTC+TGG | + | chr7.2:30593626-30593645 | MS.gene27560:CDS | 60.0% | |
TGTAGCTGCCACTCCTGTGC+AGG | + | chr7.2:30594810-30594829 | MS.gene27560:CDS | 60.0% | |
! | GTTTTCTCGGCGAAAGGCCG+AGG | - | chr7.2:30595511-30595530 | None:intergenic | 60.0% |
CCGCCTACGACACGACCATC+AGG | - | chr7.2:30594772-30594791 | None:intergenic | 65.0% | |
CGGGAAGCAGGGGAAACCGA+AGG | + | chr7.2:30593782-30593801 | MS.gene27560:CDS | 65.0% | |
GATGGTCGTGTCGTAGGCGG+TGG | + | chr7.2:30594772-30594791 | MS.gene27560:CDS | 65.0% | |
GCAGGGGAAACCGAAGGGGA+TGG | + | chr7.2:30593788-30593807 | MS.gene27560:CDS | 65.0% | |
GTCGTAGGCGGTGGAGTTGC+CGG | + | chr7.2:30594781-30594800 | MS.gene27560:CDS | 65.0% | |
TCGGCGAAAGGCCGAGGGAG+AGG | - | chr7.2:30595505-30595524 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 30593492 | 30595605 | 30593492 | ID=MS.gene27560 |
chr7.2 | mRNA | 30593492 | 30595605 | 30593492 | ID=MS.gene27560.t1;Parent=MS.gene27560 |
chr7.2 | exon | 30593492 | 30593849 | 30593492 | ID=MS.gene27560.t1.exon1;Parent=MS.gene27560.t1 |
chr7.2 | CDS | 30593492 | 30593849 | 30593492 | ID=cds.MS.gene27560.t1;Parent=MS.gene27560.t1 |
chr7.2 | exon | 30594077 | 30594132 | 30594077 | ID=MS.gene27560.t1.exon2;Parent=MS.gene27560.t1 |
chr7.2 | CDS | 30594077 | 30594132 | 30594077 | ID=cds.MS.gene27560.t1;Parent=MS.gene27560.t1 |
chr7.2 | exon | 30594248 | 30594379 | 30594248 | ID=MS.gene27560.t1.exon3;Parent=MS.gene27560.t1 |
chr7.2 | CDS | 30594248 | 30594379 | 30594248 | ID=cds.MS.gene27560.t1;Parent=MS.gene27560.t1 |
chr7.2 | exon | 30594670 | 30594831 | 30594670 | ID=MS.gene27560.t1.exon4;Parent=MS.gene27560.t1 |
chr7.2 | CDS | 30594670 | 30594831 | 30594670 | ID=cds.MS.gene27560.t1;Parent=MS.gene27560.t1 |
chr7.2 | exon | 30595309 | 30595605 | 30595309 | ID=MS.gene27560.t1.exon5;Parent=MS.gene27560.t1 |
chr7.2 | CDS | 30595309 | 30595605 | 30595309 | ID=cds.MS.gene27560.t1;Parent=MS.gene27560.t1 |
Gene Sequence |
Protein sequence |