Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28912.t1 | XP_003629204.2 | 89.6 | 432 | 39 | 1 | 1 | 432 | 1 | 426 | 5.30E-204 | 720.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28912.t1 | Q54I39 | 34.9 | 192 | 118 | 3 | 23 | 214 | 5 | 189 | 2.9e-25 | 117.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28912.t1 | G7LA89 | 89.6 | 432 | 39 | 1 | 1 | 432 | 1 | 426 | 3.8e-204 | 720.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene28912 | 0.857695 | 1.37E-62 | -1.69E-46 |
| MS.gene049596 | MS.gene28912 | 0.812902 | 3.36E-51 | -1.69E-46 |
| MS.gene050297 | MS.gene28912 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene050875 | MS.gene28912 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene05124 | MS.gene28912 | 0.814207 | 1.73E-51 | -1.69E-46 |
| MS.gene051914 | MS.gene28912 | 0.809733 | 1.64E-50 | -1.69E-46 |
| MS.gene051955 | MS.gene28912 | 0.808929 | 2.43E-50 | -1.69E-46 |
| MS.gene052367 | MS.gene28912 | 0.84511 | 4.98E-59 | -1.69E-46 |
| MS.gene053173 | MS.gene28912 | 0.883976 | 2.84E-71 | -1.69E-46 |
| MS.gene053348 | MS.gene28912 | 0.809557 | 1.78E-50 | -1.69E-46 |
| MS.gene053416 | MS.gene28912 | 0.811167 | 8.01E-51 | -1.69E-46 |
| MS.gene053417 | MS.gene28912 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene054551 | MS.gene28912 | 0.86891 | 4.59E-66 | -1.69E-46 |
| MS.gene054593 | MS.gene28912 | 0.842308 | 2.80E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene28912 | 0.846431 | 2.18E-59 | -1.69E-46 |
| MS.gene054643 | MS.gene28912 | 0.802965 | 4.37E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene28912 | 0.804063 | 2.59E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene28912 | 0.817882 | 2.62E-52 | -1.69E-46 |
| MS.gene055578 | MS.gene28912 | 0.810104 | 1.36E-50 | -1.69E-46 |
| MS.gene055616 | MS.gene28912 | 0.80326 | 3.79E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene28912 | 0.826076 | 3.31E-54 | -1.69E-46 |
| MS.gene056266 | MS.gene28912 | -0.823001 | 1.75E-53 | -1.69E-46 |
| MS.gene05640 | MS.gene28912 | 0.824252 | 8.93E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene28912 | 0.825983 | 3.48E-54 | -1.69E-46 |
| MS.gene05652 | MS.gene28912 | 0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene28912 | 0.822613 | 2.16E-53 | -1.69E-46 |
| MS.gene058853 | MS.gene28912 | 0.822142 | 2.77E-53 | -1.69E-46 |
| MS.gene060473 | MS.gene28912 | 0.813472 | 2.52E-51 | -1.69E-46 |
| MS.gene060565 | MS.gene28912 | 0.810588 | 1.07E-50 | -1.69E-46 |
| MS.gene06093 | MS.gene28912 | 0.848349 | 6.49E-60 | -1.69E-46 |
| MS.gene061044 | MS.gene28912 | 0.817986 | 2.48E-52 | -1.69E-46 |
| MS.gene061099 | MS.gene28912 | 0.8268 | 2.22E-54 | -1.69E-46 |
| MS.gene061260 | MS.gene28912 | 0.83672 | 7.93E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28912.t1 | MTR_8g074540 | 95.602 | 432 | 13 | 1 | 1 | 432 | 1 | 426 | 0.0 | 848 |
| MS.gene28912.t1 | MTR_8g074540 | 94.958 | 357 | 12 | 1 | 76 | 432 | 2 | 352 | 0.0 | 697 |
| MS.gene28912.t1 | MTR_6g038150 | 55.502 | 209 | 93 | 0 | 20 | 228 | 6 | 214 | 3.39e-81 | 261 |
| MS.gene28912.t1 | MTR_1g110690 | 52.525 | 198 | 94 | 0 | 21 | 218 | 7 | 204 | 2.03e-75 | 238 |
| MS.gene28912.t1 | MTR_6g091690 | 52.500 | 200 | 95 | 0 | 21 | 220 | 1 | 200 | 3.65e-68 | 234 |
| MS.gene28912.t1 | MTR_4g081350 | 39.662 | 237 | 129 | 4 | 26 | 249 | 6 | 241 | 4.45e-45 | 161 |
| MS.gene28912.t1 | MTR_4g081350 | 39.662 | 237 | 129 | 4 | 26 | 249 | 6 | 241 | 4.98e-45 | 160 |
| MS.gene28912.t1 | MTR_6g091690 | 50.370 | 135 | 67 | 0 | 86 | 220 | 1 | 135 | 9.87e-41 | 155 |
| MS.gene28912.t1 | MTR_2g090230 | 39.891 | 183 | 98 | 1 | 31 | 201 | 3 | 185 | 2.58e-39 | 149 |
| MS.gene28912.t1 | MTR_1g111210 | 40.678 | 177 | 104 | 1 | 20 | 195 | 7 | 183 | 2.84e-39 | 145 |
| MS.gene28912.t1 | MTR_4g038310 | 40.000 | 175 | 102 | 1 | 21 | 192 | 1 | 175 | 1.63e-37 | 142 |
| MS.gene28912.t1 | MTR_7g407010 | 37.791 | 172 | 106 | 1 | 19 | 190 | 1 | 171 | 4.54e-34 | 132 |
| MS.gene28912.t1 | MTR_8g103540 | 34.211 | 190 | 115 | 2 | 20 | 209 | 4 | 183 | 3.36e-29 | 120 |
| MS.gene28912.t1 | MTR_4g012540 | 37.791 | 172 | 96 | 4 | 45 | 216 | 1 | 161 | 4.39e-28 | 113 |
| MS.gene28912.t1 | MTR_2g102030 | 34.066 | 182 | 111 | 2 | 29 | 210 | 12 | 184 | 2.08e-27 | 113 |
| MS.gene28912.t1 | MTR_6g086635 | 34.444 | 180 | 108 | 2 | 20 | 199 | 4 | 173 | 4.31e-26 | 111 |
| MS.gene28912.t1 | MTR_2g090230 | 36.429 | 140 | 77 | 1 | 74 | 201 | 6 | 145 | 9.00e-25 | 107 |
| MS.gene28912.t1 | MTR_7g098540 | 28.235 | 170 | 118 | 1 | 29 | 198 | 19 | 184 | 1.18e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28912.t1 | AT4G35730 | 54.604 | 467 | 171 | 8 | 1 | 430 | 1 | 463 | 4.39e-154 | 444 |
| MS.gene28912.t1 | AT1G34220 | 54.545 | 209 | 95 | 0 | 20 | 228 | 6 | 214 | 2.04e-79 | 258 |
| MS.gene28912.t1 | AT1G34220 | 48.117 | 239 | 94 | 1 | 20 | 228 | 6 | 244 | 1.02e-73 | 243 |
| MS.gene28912.t1 | AT1G25420 | 51.010 | 198 | 97 | 0 | 21 | 218 | 7 | 204 | 9.58e-73 | 231 |
| MS.gene28912.t1 | AT1G25420 | 52.571 | 175 | 83 | 0 | 42 | 216 | 1 | 175 | 1.36e-65 | 212 |
| MS.gene28912.t1 | AT2G19710 | 39.928 | 278 | 162 | 2 | 21 | 294 | 4 | 280 | 5.00e-62 | 216 |
| MS.gene28912.t1 | AT4G29440 | 48.901 | 182 | 92 | 1 | 21 | 202 | 4 | 184 | 8.75e-57 | 202 |
| MS.gene28912.t1 | AT4G29440 | 50.000 | 156 | 77 | 1 | 47 | 202 | 2 | 156 | 1.56e-48 | 178 |
| MS.gene28912.t1 | AT1G25420 | 51.111 | 135 | 66 | 0 | 84 | 218 | 2 | 136 | 3.44e-47 | 163 |
| MS.gene28912.t1 | AT1G25420 | 51.111 | 135 | 66 | 0 | 84 | 218 | 2 | 136 | 3.44e-47 | 163 |
| MS.gene28912.t1 | AT1G13340 | 38.068 | 176 | 109 | 0 | 20 | 195 | 7 | 182 | 1.81e-36 | 138 |
| MS.gene28912.t1 | AT1G79910 | 27.160 | 405 | 249 | 13 | 29 | 425 | 12 | 378 | 6.26e-32 | 125 |
| MS.gene28912.t1 | AT2G14830 | 35.714 | 168 | 108 | 0 | 28 | 195 | 11 | 178 | 2.23e-31 | 124 |
| MS.gene28912.t1 | AT1G52315 | 34.118 | 170 | 102 | 3 | 30 | 198 | 13 | 173 | 3.37e-29 | 117 |
| MS.gene28912.t1 | AT4G32350 | 34.392 | 189 | 114 | 3 | 20 | 208 | 4 | 182 | 2.58e-28 | 118 |
| MS.gene28912.t1 | AT4G32350 | 34.392 | 189 | 114 | 3 | 20 | 208 | 4 | 182 | 2.58e-28 | 118 |
| MS.gene28912.t1 | AT1G79910 | 28.782 | 271 | 164 | 9 | 74 | 343 | 2 | 244 | 4.29e-23 | 99.8 |
| MS.gene28912.t1 | AT1G79910 | 29.151 | 271 | 163 | 9 | 74 | 343 | 43 | 285 | 1.18e-22 | 99.4 |
| MS.gene28912.t1 | AT1G52315 | 33.913 | 115 | 66 | 3 | 85 | 198 | 18 | 123 | 5.57e-19 | 87.4 |
| MS.gene28912.t1 | AT1G51900 | 29.282 | 181 | 118 | 4 | 21 | 192 | 1 | 180 | 6.01e-17 | 84.0 |
| MS.gene28912.t1 | AT3G15490 | 26.974 | 152 | 107 | 2 | 52 | 200 | 1 | 151 | 5.90e-13 | 68.2 |
| MS.gene28912.t1 | AT4G32350 | 33.981 | 103 | 59 | 1 | 106 | 208 | 1 | 94 | 1.87e-12 | 69.7 |
Find 97 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCATAATCTGGCAATTT+AGG | 0.180996 | 8.2:+30241919 | None:intergenic |
| ACTCATACTATTAGCTCTTC+TGG | 0.261166 | 8.2:+30242989 | None:intergenic |
| AAGATGCCACTGCTCGTATC+AGG | 0.268156 | 8.2:-30244903 | MS.gene28912:CDS |
| TAGAACTTATCATTGTAATA+TGG | 0.284835 | 8.2:+30242267 | None:intergenic |
| TGCTGAATTTGCTTCTTATA+TGG | 0.294370 | 8.2:-30242319 | MS.gene28912:CDS |
| TGTTTGATTCACCTTGTTGC+TGG | 0.294763 | 8.2:+30242782 | None:intergenic |
| TTCTTTAGTGATACAAGTTC+TGG | 0.309498 | 8.2:+30243371 | None:intergenic |
| TTCTTCATCTGTGGCTAAAC+AGG | 0.330976 | 8.2:-30241962 | MS.gene28912:CDS |
| TGTGAATTGATCAGATTATC+AGG | 0.338034 | 8.2:-30242429 | MS.gene28912:intron |
| CTAAGGAATATCAAATTGAT+TGG | 0.361119 | 8.2:-30243048 | MS.gene28912:CDS |
| TGCTTCTTATATGGCTATGA+AGG | 0.361505 | 8.2:-30242310 | MS.gene28912:CDS |
| CTTTGCAATAATTGAGAGTC+TGG | 0.366938 | 8.2:+30243545 | None:intergenic |
| ACAGGTGGTGGAAGCCGTTT+AGG | 0.368484 | 8.2:+30241988 | None:intergenic |
| ATTGCCATGCTTCTTCAGTC+TGG | 0.394558 | 8.2:-30244928 | MS.gene28912:CDS |
| CGTTTAGGTGGGAAAGTAAC+TGG | 0.414437 | 8.2:+30242003 | None:intergenic |
| GATGAGAGAGCAAAATGTTT+TGG | 0.417066 | 8.2:-30243610 | MS.gene28912:CDS |
| AAAATCTTTGAGAAGAAATA+CGG | 0.420676 | 8.2:-30243350 | MS.gene28912:CDS |
| CAGTTACTTTCCCACCTAAA+CGG | 0.425350 | 8.2:-30242002 | MS.gene28912:CDS |
| AAGCTCACTCTCGCTCTTCT+CGG | 0.432398 | 8.2:-30245141 | MS.gene28912:CDS |
| AGTAAAGTTAAAAGTATTGA+AGG | 0.443439 | 8.2:-30243077 | MS.gene28912:CDS |
| ATTCCTTCTTTCAAATCAGC+AGG | 0.458294 | 8.2:+30243434 | None:intergenic |
| TGCTGGCTTATTTGACTCCA+TGG | 0.458613 | 8.2:+30242799 | None:intergenic |
| CAGTAAAACAGCGGCGAAGA+TGG | 0.458739 | 8.2:-30245016 | MS.gene28912:CDS |
| ACTCTCGCTCTTCTCGGCCT+CGG | 0.470952 | 8.2:-30245135 | MS.gene28912:CDS |
| GCAGTGAGTTCATCATAATC+TGG | 0.471398 | 8.2:+30241910 | None:intergenic |
| CTTGGTGCGTGCGGTGGCTG+TGG | 0.477360 | 8.2:+30245173 | None:intergenic |
| TAAGGAATATCAAATTGATT+GGG | 0.478076 | 8.2:-30243047 | MS.gene28912:CDS |
| TGTTGAATTCTTCACTGGTA+AGG | 0.481821 | 8.2:+30242829 | None:intergenic |
| ACAGTTGTTGAATTCTTCAC+TGG | 0.487819 | 8.2:+30242824 | None:intergenic |
| TTTAGGATGAACACGGATGT+TGG | 0.495965 | 8.2:+30241936 | None:intergenic |
| TGTCCTGCTGATTTGAAAGA+AGG | 0.500030 | 8.2:-30243437 | MS.gene28912:CDS |
| AGTGAGCTTCACGATCCTCT+TGG | 0.500085 | 8.2:+30245155 | None:intergenic |
| GCGGCTGAATGTGCAGAAGC+TGG | 0.505056 | 8.2:+30242093 | None:intergenic |
| CTGGAATTTCTGAGCACCTA+GGG | 0.506416 | 8.2:+30243390 | None:intergenic |
| GAGGAACAAGAGGGAGGTTG+TGG | 0.506730 | 8.2:-30244971 | MS.gene28912:CDS |
| CTCTCGGTACGCACACCTCC+CGG | 0.507874 | 8.2:-30243103 | MS.gene28912:CDS |
| GCTTAATATTTGCAGCCCCT+AGG | 0.509482 | 8.2:-30243406 | MS.gene28912:CDS |
| TCGGCTTCAATTCCTCCAAA+TGG | 0.511196 | 8.2:-30245116 | MS.gene28912:intron |
| CTTAGAATCTTCAAAATGCA+TGG | 0.519506 | 8.2:+30242389 | None:intergenic |
| ATTCTTCACTGGTAAGGTGC+TGG | 0.519990 | 8.2:+30242835 | None:intergenic |
| GAATTCAACAACTGTTTCCA+TGG | 0.521775 | 8.2:-30242816 | MS.gene28912:CDS |
| GATGAAGAAGGTACAGGTGG+TGG | 0.529604 | 8.2:+30241976 | None:intergenic |
| CGGCGAAGATGGCGGTGGCG+AGG | 0.535501 | 8.2:-30245005 | MS.gene28912:CDS |
| ACCTGTACCTTCTTCATCTG+TGG | 0.539816 | 8.2:-30241971 | MS.gene28912:CDS |
| ATCATTGTAATATGGTTGAG+AGG | 0.546658 | 8.2:+30242275 | None:intergenic |
| TTAGTTGATTGACAAGCTCT+CGG | 0.549789 | 8.2:-30243119 | MS.gene28912:intron |
| AGTATTGAAGGAAATTGCTA+AGG | 0.561609 | 8.2:-30243065 | MS.gene28912:CDS |
| TTGATCAGATTATCAGGCGG+TGG | 0.562391 | 8.2:-30242423 | MS.gene28912:intron |
| CACGATCCTCTTGGTGCGTG+CGG | 0.564671 | 8.2:+30245164 | None:intergenic |
| TTAAGCTGTTGAGGAACAAG+AGG | 0.566894 | 8.2:-30244981 | MS.gene28912:CDS |
| GGATCCATCGTATGGTGGAA+AGG | 0.571212 | 8.2:-30242139 | MS.gene28912:CDS |
| AATATCTGAATGTGCAGAAG+CGG | 0.574083 | 8.2:+30242074 | None:intergenic |
| TGCAAAATATACTCACAACT+TGG | 0.575796 | 8.2:-30242235 | MS.gene28912:CDS |
| CAGCCACCGCACGCACCAAG+AGG | 0.577929 | 8.2:-30245170 | MS.gene28912:CDS |
| AAATCTTTGAGAAGAAATAC+GGG | 0.578746 | 8.2:-30243349 | MS.gene28912:CDS |
| AACAGCGGCGAAGATGGCGG+TGG | 0.580976 | 8.2:-30245010 | MS.gene28912:CDS |
| GGTGGTGGAAGCCGTTTAGG+TGG | 0.585131 | 8.2:+30241991 | None:intergenic |
| GATCCTCTTGGTGCGTGCGG+TGG | 0.585585 | 8.2:+30245167 | None:intergenic |
| TAGCTGTGGTGTTAACCGCC+AGG | 0.590524 | 8.2:-30243291 | MS.gene28912:intron |
| GCCACAGATGAAGAAGGTAC+AGG | 0.590998 | 8.2:+30241970 | None:intergenic |
| TGGCGAGGATTAAGCTGTTG+AGG | 0.592976 | 8.2:-30244990 | MS.gene28912:CDS |
| TGTTTAGCCACAGATGAAGA+AGG | 0.593150 | 8.2:+30241964 | None:intergenic |
| AGATGCCACTGCTCGTATCA+GGG | 0.597617 | 8.2:-30244902 | MS.gene28912:intron |
| TCTCAATTATTGCAAAGCAA+AGG | 0.598031 | 8.2:-30243539 | MS.gene28912:intron |
| CTTGGCTCATAAATCAACAA+TGG | 0.600438 | 8.2:-30242217 | MS.gene28912:CDS |
| TGGAATTTCTGAGCACCTAG+GGG | 0.600657 | 8.2:+30243391 | None:intergenic |
| AACAACGAGGATCCATCGTA+TGG | 0.605694 | 8.2:-30242147 | MS.gene28912:CDS |
| GCTATTCTGTGAATTAATTG+TGG | 0.606052 | 8.2:-30243568 | MS.gene28912:CDS |
| TCTGGAATTTCTGAGCACCT+AGG | 0.607005 | 8.2:+30243389 | None:intergenic |
| CTGAATGTGCAGAAGCTGGA+TGG | 0.620241 | 8.2:+30242097 | None:intergenic |
| CTTTGAGAAGAAATACGGGA+GGG | 0.621405 | 8.2:-30243345 | MS.gene28912:CDS |
| TTGTTCATGTGATCAGACCT+TGG | 0.623688 | 8.2:+30242165 | None:intergenic |
| GGCTGTGGTTACGACCGTCA+TGG | 0.623870 | 8.2:+30245188 | None:intergenic |
| ATTTGGAGGAATTGAAGCCG+AGG | 0.629990 | 8.2:+30245118 | None:intergenic |
| CTGGCAATTTAGGATGAACA+CGG | 0.632226 | 8.2:+30241929 | None:intergenic |
| TTGACCAGACTGAAGAAGCA+TGG | 0.633695 | 8.2:+30244924 | None:intergenic |
| AGCAGCTAAGAAAGCAATCG+CGG | 0.634890 | 8.2:-30242343 | MS.gene28912:CDS |
| GGCTCATAAATCAACAATGG+AGG | 0.635642 | 8.2:-30242214 | MS.gene28912:CDS |
| CATACTATTAGCTCTTCTGG+AGG | 0.636186 | 8.2:+30242992 | None:intergenic |
| TAAAACAGCGGCGAAGATGG+CGG | 0.636356 | 8.2:-30245013 | MS.gene28912:CDS |
| GTGGTGGAAGCCGTTTAGGT+GGG | 0.639223 | 8.2:+30241992 | None:intergenic |
| TAATCCTTTCCACCATACGA+TGG | 0.639277 | 8.2:+30242135 | None:intergenic |
| AACGAGGATCCATCGTATGG+TGG | 0.640263 | 8.2:-30242144 | MS.gene28912:CDS |
| CAATGGAGGAGAAAATGCAC+AGG | 0.642705 | 8.2:-30242200 | MS.gene28912:CDS |
| TGGCGGTTAACACCACAGCT+AGG | 0.644899 | 8.2:+30243293 | None:intergenic |
| AGTCAAATAAGCCAGCAACA+AGG | 0.682164 | 8.2:-30242793 | MS.gene28912:intron |
| GCTGTTGAGGAACAAGAGGG+AGG | 0.684040 | 8.2:-30244977 | MS.gene28912:CDS |
| ACAGATGAAGAAGGTACAGG+TGG | 0.685488 | 8.2:+30241973 | None:intergenic |
| TCTTTGAGAAGAAATACGGG+AGG | 0.686451 | 8.2:-30243346 | MS.gene28912:CDS |
| AATTACCCTGATACGAGCAG+TGG | 0.691637 | 8.2:+30244897 | None:intergenic |
| TTTAACTTTACTTCACCGGG+AGG | 0.697118 | 8.2:+30243088 | None:intergenic |
| TAAGCTGTTGAGGAACAAGA+GGG | 0.707139 | 8.2:-30244980 | MS.gene28912:CDS |
| ACGGATCTTAGACCTAGCTG+TGG | 0.708544 | 8.2:-30243305 | MS.gene28912:CDS |
| TTAGGTGGGAAAGTAACTGG+AGG | 0.709094 | 8.2:+30242006 | None:intergenic |
| ACAGGTCGCATAGCTTACCA+AGG | 0.727675 | 8.2:-30242182 | MS.gene28912:CDS |
| GAATTGATCAGATTATCAGG+CGG | 0.765894 | 8.2:-30242426 | MS.gene28912:intron |
| GTCTGATCACATGAACAACG+AGG | 0.815512 | 8.2:-30242160 | MS.gene28912:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATCATATATAAATAGGA+AGG | - | chr8.2:30244387-30244406 | MS.gene28912:intron | 15.0% |
| !! | TAGGATTATCATATATAAAT+AGG | - | chr8.2:30244383-30244402 | MS.gene28912:intron | 15.0% |
| !! | TCATTCTTAAGAATAATTTA+CGG | + | chr8.2:30242772-30242791 | None:intergenic | 15.0% |
| !!! | GATTTTTAACAAGATTTTAT+TGG | - | chr8.2:30243405-30243424 | MS.gene28912:CDS | 15.0% |
| !!! | GGTTTGATAATATAATTTTT+GGG | - | chr8.2:30243295-30243314 | MS.gene28912:CDS | 15.0% |
| !!! | TGAATGTTATGTTTTAAATA+TGG | - | chr8.2:30242410-30242429 | MS.gene28912:CDS | 15.0% |
| !!! | TGGTTTGATAATATAATTTT+TGG | - | chr8.2:30243294-30243313 | MS.gene28912:CDS | 15.0% |
| !!! | TTTTAGTTAAACTATTATGA+AGG | - | chr8.2:30243558-30243577 | MS.gene28912:CDS | 15.0% |
| !!! | TTTTATAAAAATAGAGCATT+TGG | - | chr8.2:30242799-30242818 | MS.gene28912:CDS | 15.0% |
| !! | AAGAACGATATAATTCATAA+AGG | + | chr8.2:30244590-30244609 | None:intergenic | 20.0% |
| !! | ACATATAACATACAGAAAAA+TGG | + | chr8.2:30244115-30244134 | None:intergenic | 20.0% |
| !! | AGAAAAGTTATTAGTTAATG+AGG | - | chr8.2:30244356-30244375 | MS.gene28912:intron | 20.0% |
| !! | CAACAACATAGAAAAAAAAA+AGG | + | chr8.2:30241968-30241987 | None:intergenic | 20.0% |
| !! | CAGAAATTTATTCTTAAGAA+TGG | - | chr8.2:30242903-30242922 | MS.gene28912:intron | 20.0% |
| !! | CTAATTTCAATCCAATTATT+GGG | - | chr8.2:30244543-30244562 | MS.gene28912:intron | 20.0% |
| !! | CTGAAGAAAATGAAAAAAAT+AGG | + | chr8.2:30244511-30244530 | None:intergenic | 20.0% |
| !! | TAAGGAATATCAAATTGATT+GGG | - | chr8.2:30244009-30244028 | MS.gene28912:intron | 20.0% |
| !! | TAGAACTTATCATTGTAATA+TGG | + | chr8.2:30244792-30244811 | None:intergenic | 20.0% |
| !! | TCTAATTTCAATCCAATTAT+TGG | - | chr8.2:30244542-30244561 | MS.gene28912:intron | 20.0% |
| !! | TTACTAATGATATAGCATTT+CGG | - | chr8.2:30243229-30243248 | MS.gene28912:intron | 20.0% |
| !! | TTCTATAAAGATAGATTGTT+TGG | - | chr8.2:30242866-30242885 | MS.gene28912:intron | 20.0% |
| !! | TTTGTAAAAGATAGAGAATT+TGG | - | chr8.2:30242934-30242953 | MS.gene28912:intron | 20.0% |
| !!! | AAAATCTTTGAGAAGAAATA+CGG | - | chr8.2:30243706-30243725 | MS.gene28912:intron | 20.0% |
| !!! | ACAAGATTTTATTGGATTAT+AGG | - | chr8.2:30243413-30243432 | MS.gene28912:CDS | 20.0% |
| !!! | AGTAAAGTTAAAAGTATTGA+AGG | - | chr8.2:30243979-30243998 | MS.gene28912:intron | 20.0% |
| !!! | ATATATAAATAGGAAGGTTT+TGG | - | chr8.2:30244393-30244412 | MS.gene28912:intron | 20.0% |
| !!! | CATTTTGTTTAACTTAATAG+AGG | - | chr8.2:30242574-30242593 | MS.gene28912:intron | 20.0% |
| !!! | GTCTTTTTCTTTTCTATATT+GGG | - | chr8.2:30243369-30243388 | MS.gene28912:CDS | 20.0% |
| !!! | TGTCTTTTTCTTTTCTATAT+TGG | - | chr8.2:30243368-30243387 | MS.gene28912:CDS | 20.0% |
| ! | AATTCAAGCAACAACAAATT+TGG | + | chr8.2:30242553-30242572 | None:intergenic | 25.0% |
| ! | ACAATTAACACAATCATGTT+TGG | + | chr8.2:30242378-30242397 | None:intergenic | 25.0% |
| ! | ATATAATTCATAAAGGCAAC+AGG | + | chr8.2:30244583-30244602 | None:intergenic | 25.0% |
| ! | CAATCTATCTTTATAGAATG+CGG | + | chr8.2:30242864-30242883 | None:intergenic | 25.0% |
| ! | CAGAAAATTATTCTTAAGAG+TGG | - | chr8.2:30243129-30243148 | MS.gene28912:intron | 25.0% |
| ! | CTAAGGAATATCAAATTGAT+TGG | - | chr8.2:30244008-30244027 | MS.gene28912:intron | 25.0% |
| ! | GAATACTTTCGAGAATTAAT+AGG | + | chr8.2:30243888-30243907 | None:intergenic | 25.0% |
| ! | GTCTATAAAAATACAGCATT+TGG | - | chr8.2:30243159-30243178 | MS.gene28912:intron | 25.0% |
| ! | GTGTACAGAAAATTATTCTT+AGG | - | chr8.2:30242831-30242850 | MS.gene28912:CDS | 25.0% |
| ! | TACTCTTAGGATATATGATA+AGG | - | chr8.2:30244298-30244317 | MS.gene28912:intron | 25.0% |
| ! | TATAATTCATAAAGGCAACA+GGG | + | chr8.2:30244582-30244601 | None:intergenic | 25.0% |
| ! | TATTAGTTAATGAGGTAGTT+AGG | - | chr8.2:30244364-30244383 | MS.gene28912:intron | 25.0% |
| !! | AAATCTTTGAGAAGAAATAC+GGG | - | chr8.2:30243707-30243726 | MS.gene28912:intron | 25.0% |
| !! | ATGTTGTTGATTGAAGAATT+GGG | - | chr8.2:30241979-30241998 | MS.gene28912:CDS | 25.0% |
| !! | GACAGAATTTTTCTTATGAA+TGG | - | chr8.2:30242969-30242988 | MS.gene28912:intron | 25.0% |
| !! | TATGTTGTTGATTGAAGAAT+TGG | - | chr8.2:30241978-30241997 | MS.gene28912:CDS | 25.0% |
| !!! | ATTTTTGGGATTAGTTGTAA+TGG | - | chr8.2:30243309-30243328 | MS.gene28912:CDS | 25.0% |
| !!! | GAAAAAAAAAAGGTACCATT+TGG | + | chr8.2:30241958-30241977 | None:intergenic | 25.0% |
| !!! | TACTTTTAACTTTACTTCAC+CGG | + | chr8.2:30243975-30243994 | None:intergenic | 25.0% |
| !!! | TTAAATATGGAGTAGTTTTG+TGG | - | chr8.2:30242423-30242442 | MS.gene28912:intron | 25.0% |
| !!! | TTTTGTAAACATAGAGCATT+TGG | - | chr8.2:30243092-30243111 | MS.gene28912:CDS | 25.0% |
| AGTTCTTCAGAATTTGAGAA+AGG | - | chr8.2:30244324-30244343 | MS.gene28912:intron | 30.0% | |
| ATCATTGTAATATGGTTGAG+AGG | + | chr8.2:30244784-30244803 | None:intergenic | 30.0% | |
| CAAAATATCAATGGAGAACT+AGG | + | chr8.2:30244158-30244177 | None:intergenic | 30.0% | |
| CTTAGAATCTTCAAAATGCA+TGG | + | chr8.2:30244670-30244689 | None:intergenic | 30.0% | |
| CTTCATTATAAGCAAACACA+AGG | + | chr8.2:30243816-30243835 | None:intergenic | 30.0% | |
| GCTATTCTGTGAATTAATTG+TGG | - | chr8.2:30243488-30243507 | MS.gene28912:intron | 30.0% | |
| GTAAACTAACATCAAGAACA+TGG | + | chr8.2:30242718-30242737 | None:intergenic | 30.0% | |
| GTGAATCAAACAATACTCTT+AGG | - | chr8.2:30244285-30244304 | MS.gene28912:intron | 30.0% | |
| GTTCTTCAGAATTTGAGAAA+GGG | - | chr8.2:30244325-30244344 | MS.gene28912:intron | 30.0% | |
| TCATCATAATCTGGCAATTT+AGG | + | chr8.2:30245140-30245159 | None:intergenic | 30.0% | |
| TCTCAATTATTGCAAAGCAA+AGG | - | chr8.2:30243517-30243536 | MS.gene28912:intron | 30.0% | |
| TCTTAGGATATATGATAAGG+TGG | - | chr8.2:30244301-30244320 | MS.gene28912:intron | 30.0% | |
| TGCAAAATATACTCACAACT+TGG | - | chr8.2:30244821-30244840 | MS.gene28912:intron | 30.0% | |
| TGTGAATTGATCAGATTATC+AGG | - | chr8.2:30244627-30244646 | MS.gene28912:intron | 30.0% | |
| TTCTTCAGAATTTGAGAAAG+GGG | - | chr8.2:30244326-30244345 | MS.gene28912:intron | 30.0% | |
| TTCTTTAGTGATACAAGTTC+TGG | + | chr8.2:30243688-30243707 | None:intergenic | 30.0% | |
| TTTCTTAGGAACCCAATAAT+TGG | + | chr8.2:30244557-30244576 | None:intergenic | 30.0% | |
| ! | AAGTTGTGAGTATATTTTGC+AGG | + | chr8.2:30244822-30244841 | None:intergenic | 30.0% |
| ! | AGTATTGAAGGAAATTGCTA+AGG | - | chr8.2:30243991-30244010 | MS.gene28912:intron | 30.0% |
| ! | ATGATTTTGCAGTAAAACAG+CGG | - | chr8.2:30242031-30242050 | MS.gene28912:CDS | 30.0% |
| ! | TGCTGAATTTGCTTCTTATA+TGG | - | chr8.2:30244737-30244756 | MS.gene28912:intron | 30.0% |
| ! | TGTTGTTGATTGAAGAATTG+GGG | - | chr8.2:30241980-30241999 | MS.gene28912:CDS | 30.0% |
| !! | AAAAAAAAGGTACCATTTGG+AGG | + | chr8.2:30241955-30241974 | None:intergenic | 30.0% |
| !! | CTAGTTCTCCATTGATATTT+TGG | - | chr8.2:30244156-30244175 | MS.gene28912:intron | 30.0% |
| !!! | ACTTTTAACTTTACTTCACC+GGG | + | chr8.2:30243974-30243993 | None:intergenic | 30.0% |
| !!! | TGATGTGTTGTTTACCTTTT+TGG | - | chr8.2:30243335-30243354 | MS.gene28912:CDS | 30.0% |
| AATATCTGAATGTGCAGAAG+CGG | + | chr8.2:30244985-30245004 | None:intergenic | 35.0% | |
| ACACAAGGAAAAATGCAATC+TGG | + | chr8.2:30243801-30243820 | None:intergenic | 35.0% | |
| ACAGTTGTTGAATTCTTCAC+TGG | + | chr8.2:30244235-30244254 | None:intergenic | 35.0% | |
| ACATTCACAGGATTGGAATT+TGG | - | chr8.2:30243274-30243293 | MS.gene28912:intron | 35.0% | |
| ACTGTAAACATTCACAGGAT+TGG | - | chr8.2:30243267-30243286 | MS.gene28912:intron | 35.0% | |
| ATTCCTTCTTTCAAATCAGC+AGG | + | chr8.2:30243625-30243644 | None:intergenic | 35.0% | |
| ATTGTGAAGGAGAAACCTTT+GGG | - | chr8.2:30244471-30244490 | MS.gene28912:intron | 35.0% | |
| CATCTACTGTAAACATTCAC+AGG | - | chr8.2:30243262-30243281 | MS.gene28912:intron | 35.0% | |
| CTCTTCTCTATTATCAGGAA+GGG | - | chr8.2:30244179-30244198 | MS.gene28912:intron | 35.0% | |
| CTTGGCTCATAAATCAACAA+TGG | - | chr8.2:30244839-30244858 | MS.gene28912:intron | 35.0% | |
| CTTTGCAATAATTGAGAGTC+TGG | + | chr8.2:30243514-30243533 | None:intergenic | 35.0% | |
| GAATAGTGACTCTATTGTGA+AGG | - | chr8.2:30244458-30244477 | MS.gene28912:intron | 35.0% | |
| GAATTCAACAACTGTTTCCA+TGG | - | chr8.2:30244240-30244259 | MS.gene28912:intron | 35.0% | |
| GAATTGATCAGATTATCAGG+CGG | - | chr8.2:30244630-30244649 | MS.gene28912:intron | 35.0% | |
| GAGAAGAGCCAAAATATCAA+TGG | + | chr8.2:30244167-30244186 | None:intergenic | 35.0% | |
| TATTGTGAAGGAGAAACCTT+TGG | - | chr8.2:30244470-30244489 | MS.gene28912:intron | 35.0% | |
| TCTTCAGAATTTGAGAAAGG+GGG | - | chr8.2:30244327-30244346 | MS.gene28912:intron | 35.0% | |
| TCTTCTCTATTATCAGGAAG+GGG | - | chr8.2:30244180-30244199 | MS.gene28912:intron | 35.0% | |
| TGCTTCTTATATGGCTATGA+AGG | - | chr8.2:30244746-30244765 | MS.gene28912:intron | 35.0% | |
| TGTTGAATTCTTCACTGGTA+AGG | + | chr8.2:30244230-30244249 | None:intergenic | 35.0% | |
| TTAGTTGATTGACAAGCTCT+CGG | - | chr8.2:30243937-30243956 | MS.gene28912:intron | 35.0% | |
| ! | ACTCATACTATTAGCTCTTC+TGG | + | chr8.2:30244070-30244089 | None:intergenic | 35.0% |
| ! | GATGAGAGAGCAAAATGTTT+TGG | - | chr8.2:30243446-30243465 | MS.gene28912:intron | 35.0% |
| ! | GTTGTTGATTGAAGAATTGG+GGG | - | chr8.2:30241981-30242000 | MS.gene28912:CDS | 35.0% |
| ! | TAATGAAGAACGAAGTGTCT+CGG | - | chr8.2:30243828-30243847 | MS.gene28912:intron | 35.0% |
| ! | TTGTTGATTGAAGAATTGGG+GGG | - | chr8.2:30241982-30242001 | MS.gene28912:CDS | 35.0% |
| !! | AATTTTCAGCACTGAGTTTG+TGG | - | chr8.2:30242616-30242635 | MS.gene28912:intron | 35.0% |
| !! | GAGAATTTGGTGTGAAATTG+TGG | - | chr8.2:30242947-30242966 | MS.gene28912:intron | 35.0% |
| !! | TTTGGCTCTTCTCTATTATC+AGG | - | chr8.2:30244174-30244193 | MS.gene28912:intron | 35.0% |
| !!! | AGGAAGGTTTTGGAATTAGA+GGG | - | chr8.2:30244403-30244422 | MS.gene28912:intron | 35.0% |
| !!! | ATATGGAGTAGTTTTGTGGT+TGG | - | chr8.2:30242427-30242446 | MS.gene28912:intron | 35.0% |
| !!! | TAGGAAGGTTTTGGAATTAG+AGG | - | chr8.2:30244402-30244421 | MS.gene28912:intron | 35.0% |
| AAATGCAGCACCAACATTTC+AGG | + | chr8.2:30242344-30242363 | None:intergenic | 40.0% | |
| ACACCTTCAACCTGAAATGT+TGG | - | chr8.2:30242331-30242350 | MS.gene28912:CDS | 40.0% | |
| ACTTTCCTAGAGTTCGTGAA+AGG | - | chr8.2:30242682-30242701 | MS.gene28912:intron | 40.0% | |
| AGTCAAATAAGCCAGCAACA+AGG | - | chr8.2:30244263-30244282 | MS.gene28912:intron | 40.0% | |
| ATTCACCTTTCACGAACTCT+AGG | + | chr8.2:30242690-30242709 | None:intergenic | 40.0% | |
| GCAGTGAGTTCATCATAATC+TGG | + | chr8.2:30245149-30245168 | None:intergenic | 40.0% | |
| GCTCTTCTCTATTATCAGGA+AGG | - | chr8.2:30244178-30244197 | MS.gene28912:intron | 40.0% | |
| GGCTCATAAATCAACAATGG+AGG | - | chr8.2:30244842-30244861 | MS.gene28912:intron | 40.0% | |
| TAAGCTGTTGAGGAACAAGA+GGG | - | chr8.2:30242076-30242095 | MS.gene28912:CDS | 40.0% | |
| TAATCCTTTCCACCATACGA+TGG | + | chr8.2:30244924-30244943 | None:intergenic | 40.0% | |
| TGCTAATCCGAGTCATTTCA+GGG | - | chr8.2:30243594-30243613 | MS.gene28912:CDS | 40.0% | |
| TGTTTAGCCACAGATGAAGA+AGG | + | chr8.2:30245095-30245114 | None:intergenic | 40.0% | |
| TGTTTGATTCACCTTGTTGC+TGG | + | chr8.2:30244277-30244296 | None:intergenic | 40.0% | |
| TTAAGCTGTTGAGGAACAAG+AGG | - | chr8.2:30242075-30242094 | MS.gene28912:CDS | 40.0% | |
| TTCTTCATCTGTGGCTAAAC+AGG | - | chr8.2:30245094-30245113 | MS.gene28912:intron | 40.0% | |
| TTGTGAAGGAGAAACCTTTG+GGG | - | chr8.2:30244472-30244491 | MS.gene28912:intron | 40.0% | |
| TTGTTCATGTGATCAGACCT+TGG | + | chr8.2:30244894-30244913 | None:intergenic | 40.0% | |
| ! | AAGGCAACAGGGTATTTCTT+AGG | + | chr8.2:30244571-30244590 | None:intergenic | 40.0% |
| ! | CAGTTACTTTCCCACCTAAA+CGG | - | chr8.2:30245054-30245073 | MS.gene28912:intron | 40.0% |
| ! | CATACTATTAGCTCTTCTGG+AGG | + | chr8.2:30244067-30244086 | None:intergenic | 40.0% |
| ! | CTGGCAATTTAGGATGAACA+CGG | + | chr8.2:30245130-30245149 | None:intergenic | 40.0% |
| ! | CTTTGAGAAGAAATACGGGA+GGG | - | chr8.2:30243711-30243730 | MS.gene28912:intron | 40.0% |
| ! | GGATTTTGTATCTGCTGCTA+CGG | - | chr8.2:30243732-30243751 | MS.gene28912:intron | 40.0% |
| ! | TCTTTGAGAAGAAATACGGG+AGG | - | chr8.2:30243710-30243729 | MS.gene28912:intron | 40.0% |
| ! | TTTAACTTTACTTCACCGGG+AGG | + | chr8.2:30243971-30243990 | None:intergenic | 40.0% |
| ! | TTTAGGATGAACACGGATGT+TGG | + | chr8.2:30245123-30245142 | None:intergenic | 40.0% |
| !! | GAGCATTTGGTGTGAAATTG+TGG | - | chr8.2:30242812-30242831 | MS.gene28912:CDS | 40.0% |
| !! | TGTCCTGCTGATTTGAAAGA+AGG | - | chr8.2:30243619-30243638 | MS.gene28912:CDS | 40.0% |
| !!! | GTTGTTTACCTTTTTGGCTG+TGG | - | chr8.2:30243341-30243360 | MS.gene28912:CDS | 40.0% |
| !!! | TTGGTGCTGCATTTTCATCA+TGG | - | chr8.2:30242350-30242369 | MS.gene28912:CDS | 40.0% |
| AACAACGAGGATCCATCGTA+TGG | - | chr8.2:30244909-30244928 | MS.gene28912:CDS | 45.0% | |
| AATTACCCTGATACGAGCAG+TGG | + | chr8.2:30242162-30242181 | None:intergenic | 45.0% | |
| ACCTGTACCTTCTTCATCTG+TGG | - | chr8.2:30245085-30245104 | MS.gene28912:intron | 45.0% | |
| AGCAGCTAAGAAAGCAATCG+CGG | - | chr8.2:30244713-30244732 | MS.gene28912:intron | 45.0% | |
| ATTCTTCACTGGTAAGGTGC+TGG | + | chr8.2:30244224-30244243 | None:intergenic | 45.0% | |
| ATTGCCATGCTTCTTCAGTC+TGG | - | chr8.2:30242128-30242147 | MS.gene28912:CDS | 45.0% | |
| ATTTGGAGGAATTGAAGCCG+AGG | + | chr8.2:30241941-30241960 | None:intergenic | 45.0% | |
| CAATGGAGGAGAAAATGCAC+AGG | - | chr8.2:30244856-30244875 | MS.gene28912:intron | 45.0% | |
| CGTTTAGGTGGGAAAGTAAC+TGG | + | chr8.2:30245056-30245075 | None:intergenic | 45.0% | |
| CTGCTAATCCGAGTCATTTC+AGG | - | chr8.2:30243593-30243612 | MS.gene28912:CDS | 45.0% | |
| CTGGAATTTCTGAGCACCTA+GGG | + | chr8.2:30243669-30243688 | None:intergenic | 45.0% | |
| GACATTAGCCACAGCCAAAA+AGG | + | chr8.2:30243352-30243371 | None:intergenic | 45.0% | |
| GAGAGAAATCTCTACCCCAA+AGG | + | chr8.2:30244489-30244508 | None:intergenic | 45.0% | |
| GCTTAATATTTGCAGCCCCT+AGG | - | chr8.2:30243650-30243669 | MS.gene28912:intron | 45.0% | |
| GGACATTCCCTGAAATGACT+CGG | + | chr8.2:30243604-30243623 | None:intergenic | 45.0% | |
| GTCTGATCACATGAACAACG+AGG | - | chr8.2:30244896-30244915 | MS.gene28912:intron | 45.0% | |
| TCGGCTTCAATTCCTCCAAA+TGG | - | chr8.2:30241940-30241959 | MS.gene28912:CDS | 45.0% | |
| TGGAATTTCTGAGCACCTAG+GGG | + | chr8.2:30243668-30243687 | None:intergenic | 45.0% | |
| TTAGGTGGGAAAGTAACTGG+AGG | + | chr8.2:30245053-30245072 | None:intergenic | 45.0% | |
| TTGACCAGACTGAAGAAGCA+TGG | + | chr8.2:30242135-30242154 | None:intergenic | 45.0% | |
| TTGATCAGATTATCAGGCGG+TGG | - | chr8.2:30244633-30244652 | MS.gene28912:intron | 45.0% | |
| ! | ACAGATGAAGAAGGTACAGG+TGG | + | chr8.2:30245086-30245105 | None:intergenic | 45.0% |
| ! | AGAACGAAGTGTCTCGGATT+TGG | - | chr8.2:30243834-30243853 | MS.gene28912:intron | 45.0% |
| ! | TCTGGAATTTCTGAGCACCT+AGG | + | chr8.2:30243670-30243689 | None:intergenic | 45.0% |
| !! | GCACCAACATTTCAGGTTGA+AGG | + | chr8.2:30242337-30242356 | None:intergenic | 45.0% |
| !! | TGCTGGCTTATTTGACTCCA+TGG | + | chr8.2:30244260-30244279 | None:intergenic | 45.0% |
| AACGAGGATCCATCGTATGG+TGG | - | chr8.2:30244912-30244931 | MS.gene28912:CDS | 50.0% | |
| AAGATGCCACTGCTCGTATC+AGG | - | chr8.2:30242153-30242172 | MS.gene28912:CDS | 50.0% | |
| AAGCTCACTCTCGCTCTTCT+CGG | - | chr8.2:30241915-30241934 | MS.gene28912:CDS | 50.0% | |
| ACAGGTCGCATAGCTTACCA+AGG | - | chr8.2:30244874-30244893 | MS.gene28912:intron | 50.0% | |
| ACGGATCTTAGACCTAGCTG+TGG | - | chr8.2:30243751-30243770 | MS.gene28912:intron | 50.0% | |
| AGATGCCACTGCTCGTATCA+GGG | - | chr8.2:30242154-30242173 | MS.gene28912:CDS | 50.0% | |
| AGTGAGCTTCACGATCCTCT+TGG | + | chr8.2:30241904-30241923 | None:intergenic | 50.0% | |
| CAATCTGGAGATGACCTACC+TGG | + | chr8.2:30243786-30243805 | None:intergenic | 50.0% | |
| CAGTAAAACAGCGGCGAAGA+TGG | - | chr8.2:30242040-30242059 | MS.gene28912:CDS | 50.0% | |
| CTGAATGTGCAGAAGCTGGA+TGG | + | chr8.2:30244962-30244981 | None:intergenic | 50.0% | |
| TAAAACAGCGGCGAAGATGG+CGG | - | chr8.2:30242043-30242062 | MS.gene28912:CDS | 50.0% | |
| TGGCGAGGATTAAGCTGTTG+AGG | - | chr8.2:30242066-30242085 | MS.gene28912:CDS | 50.0% | |
| ! | GATGAAGAAGGTACAGGTGG+TGG | + | chr8.2:30245083-30245102 | None:intergenic | 50.0% |
| ! | GCCACAGATGAAGAAGGTAC+AGG | + | chr8.2:30245089-30245108 | None:intergenic | 50.0% |
| ! | GGATCCATCGTATGGTGGAA+AGG | - | chr8.2:30244917-30244936 | MS.gene28912:CDS | 50.0% |
| GAGGAACAAGAGGGAGGTTG+TGG | - | chr8.2:30242085-30242104 | MS.gene28912:CDS | 55.0% | |
| GCTGTTGAGGAACAAGAGGG+AGG | - | chr8.2:30242079-30242098 | MS.gene28912:CDS | 55.0% | |
| TCTGGAGATGACCTACCTGG+CGG | + | chr8.2:30243783-30243802 | None:intergenic | 55.0% | |
| TGGCGGTTAACACCACAGCT+AGG | + | chr8.2:30243766-30243785 | None:intergenic | 55.0% | |
| ! | GTGGTGGAAGCCGTTTAGGT+GGG | + | chr8.2:30245067-30245086 | None:intergenic | 55.0% |
| ! | TAGCTGTGGTGTTAACCGCC+AGG | - | chr8.2:30243765-30243784 | MS.gene28912:intron | 55.0% |
| ! | TGTGGTGTTAACCGCCAGGT+AGG | - | chr8.2:30243769-30243788 | MS.gene28912:intron | 55.0% |
| !! | ACAGGTGGTGGAAGCCGTTT+AGG | + | chr8.2:30245071-30245090 | None:intergenic | 55.0% |
| ACTCTCGCTCTTCTCGGCCT+CGG | - | chr8.2:30241921-30241940 | MS.gene28912:CDS | 60.0% | |
| GCGGCTGAATGTGCAGAAGC+TGG | + | chr8.2:30244966-30244985 | None:intergenic | 60.0% | |
| ! | CACGATCCTCTTGGTGCGTG+CGG | + | chr8.2:30241895-30241914 | None:intergenic | 60.0% |
| !! | GGTGGTGGAAGCCGTTTAGG+TGG | + | chr8.2:30245068-30245087 | None:intergenic | 60.0% |
| CTCTCGGTACGCACACCTCC+CGG | - | chr8.2:30243953-30243972 | MS.gene28912:intron | 65.0% | |
| ! | AACAGCGGCGAAGATGGCGG+TGG | - | chr8.2:30242046-30242065 | MS.gene28912:CDS | 65.0% |
| ! | GATCCTCTTGGTGCGTGCGG+TGG | + | chr8.2:30241892-30241911 | None:intergenic | 65.0% |
| CAGCCACCGCACGCACCAAG+AGG | - | chr8.2:30241886-30241905 | MS.gene28912:CDS | 70.0% | |
| ! | CTTGGTGCGTGCGGTGGCTG+TGG | + | chr8.2:30241886-30241905 | None:intergenic | 70.0% |
| ! | CGGCGAAGATGGCGGTGGCG+AGG | - | chr8.2:30242051-30242070 | MS.gene28912:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 30241870 | 30245208 | 30241870 | ID=MS.gene28912 |
| chr8.2 | mRNA | 30241870 | 30245208 | 30241870 | ID=MS.gene28912.t1;Parent=MS.gene28912 |
| chr8.2 | exon | 30245117 | 30245208 | 30245117 | ID=MS.gene28912.t1.exon1;Parent=MS.gene28912.t1 |
| chr8.2 | CDS | 30245117 | 30245208 | 30245117 | ID=cds.MS.gene28912.t1;Parent=MS.gene28912.t1 |
| chr8.2 | exon | 30244903 | 30245035 | 30244903 | ID=MS.gene28912.t1.exon2;Parent=MS.gene28912.t1 |
| chr8.2 | CDS | 30244903 | 30245035 | 30244903 | ID=cds.MS.gene28912.t1;Parent=MS.gene28912.t1 |
| chr8.2 | exon | 30243540 | 30243643 | 30243540 | ID=MS.gene28912.t1.exon3;Parent=MS.gene28912.t1 |
| chr8.2 | CDS | 30243540 | 30243643 | 30243540 | ID=cds.MS.gene28912.t1;Parent=MS.gene28912.t1 |
| chr8.2 | exon | 30243292 | 30243463 | 30243292 | ID=MS.gene28912.t1.exon4;Parent=MS.gene28912.t1 |
| chr8.2 | CDS | 30243292 | 30243463 | 30243292 | ID=cds.MS.gene28912.t1;Parent=MS.gene28912.t1 |
| chr8.2 | exon | 30242997 | 30243137 | 30242997 | ID=MS.gene28912.t1.exon5;Parent=MS.gene28912.t1 |
| chr8.2 | CDS | 30242997 | 30243137 | 30242997 | ID=cds.MS.gene28912.t1;Parent=MS.gene28912.t1 |
| chr8.2 | exon | 30242794 | 30242882 | 30242794 | ID=MS.gene28912.t1.exon6;Parent=MS.gene28912.t1 |
| chr8.2 | CDS | 30242794 | 30242882 | 30242794 | ID=cds.MS.gene28912.t1;Parent=MS.gene28912.t1 |
| chr8.2 | exon | 30241870 | 30242437 | 30241870 | ID=MS.gene28912.t1.exon7;Parent=MS.gene28912.t1 |
| chr8.2 | CDS | 30241870 | 30242437 | 30241870 | ID=cds.MS.gene28912.t1;Parent=MS.gene28912.t1 |
| Gene Sequence |
| Protein sequence |
