Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29215.t1 | XP_003589787.2 | 98.9 | 350 | 4 | 0 | 9 | 358 | 120 | 469 | 4.10E-202 | 713.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29215.t1 | Q9LHE3 | 70.6 | 350 | 102 | 1 | 9 | 358 | 122 | 470 | 1.4e-150 | 533.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29215.t1 | G7ICI5 | 98.9 | 350 | 4 | 0 | 9 | 358 | 120 | 469 | 3.0e-202 | 713.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene29215 | 0.840262 | 9.67E-58 | -1.69E-46 |
| MS.gene050707 | MS.gene29215 | 0.83575 | 1.40E-56 | -1.69E-46 |
| MS.gene052169 | MS.gene29215 | 0.810358 | 1.20E-50 | -1.69E-46 |
| MS.gene052209 | MS.gene29215 | 0.814156 | 1.78E-51 | -1.69E-46 |
| MS.gene052308 | MS.gene29215 | 0.827633 | 1.40E-54 | -1.69E-46 |
| MS.gene052367 | MS.gene29215 | 0.809645 | 1.71E-50 | -1.69E-46 |
| MS.gene053173 | MS.gene29215 | 0.812198 | 4.78E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene29215 | 0.824015 | 1.01E-53 | -1.69E-46 |
| MS.gene054614 | MS.gene29215 | 0.814402 | 1.57E-51 | -1.69E-46 |
| MS.gene054662 | MS.gene29215 | 0.832165 | 1.10E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene29215 | 0.862812 | 3.89E-64 | -1.69E-46 |
| MS.gene055308 | MS.gene29215 | 0.811144 | 8.11E-51 | -1.69E-46 |
| MS.gene055382 | MS.gene29215 | 0.806902 | 6.56E-50 | -1.69E-46 |
| MS.gene055578 | MS.gene29215 | 0.837736 | 4.36E-57 | -1.69E-46 |
| MS.gene055957 | MS.gene29215 | 0.810331 | 1.22E-50 | -1.69E-46 |
| MS.gene056041 | MS.gene29215 | 0.817813 | 2.71E-52 | -1.69E-46 |
| MS.gene05652 | MS.gene29215 | 0.874342 | 7.28E-68 | -1.69E-46 |
| MS.gene056618 | MS.gene29215 | 0.801073 | 1.07E-48 | -1.69E-46 |
| MS.gene057367 | MS.gene29215 | 0.853769 | 1.92E-61 | -1.69E-46 |
| MS.gene057669 | MS.gene29215 | 0.850767 | 1.37E-60 | -1.69E-46 |
| MS.gene057990 | MS.gene29215 | 0.808026 | 3.79E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene29215 | 0.851196 | 1.04E-60 | -1.69E-46 |
| MS.gene058853 | MS.gene29215 | 0.860074 | 2.66E-63 | -1.69E-46 |
| MS.gene059616 | MS.gene29215 | 0.834115 | 3.61E-56 | -1.69E-46 |
| MS.gene06093 | MS.gene29215 | 0.815256 | 1.01E-51 | -1.69E-46 |
| MS.gene060985 | MS.gene29215 | 0.816837 | 4.50E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29215.t1 | MTR_1g039270 | 98.857 | 350 | 4 | 0 | 9 | 358 | 120 | 469 | 0.0 | 705 |
| MS.gene29215.t1 | MTR_1g115210 | 74.571 | 350 | 88 | 1 | 9 | 358 | 138 | 486 | 0.0 | 523 |
| MS.gene29215.t1 | MTR_1g111350 | 52.857 | 350 | 160 | 3 | 9 | 358 | 123 | 467 | 3.42e-120 | 355 |
| MS.gene29215.t1 | MTR_7g117430 | 50.425 | 353 | 171 | 4 | 9 | 358 | 133 | 484 | 7.97e-111 | 332 |
| MS.gene29215.t1 | MTR_6g085010 | 47.522 | 343 | 172 | 5 | 17 | 358 | 156 | 491 | 4.71e-102 | 310 |
| MS.gene29215.t1 | MTR_3g097150 | 40.563 | 355 | 194 | 10 | 14 | 358 | 99 | 446 | 4.03e-82 | 257 |
| MS.gene29215.t1 | MTR_8g103880 | 37.209 | 344 | 210 | 4 | 10 | 351 | 109 | 448 | 8.66e-80 | 251 |
| MS.gene29215.t1 | MTR_8g096990 | 36.066 | 366 | 208 | 13 | 7 | 358 | 76 | 429 | 4.22e-68 | 220 |
| MS.gene29215.t1 | MTR_4g007740 | 35.537 | 363 | 212 | 6 | 9 | 358 | 124 | 477 | 4.54e-68 | 221 |
| MS.gene29215.t1 | MTR_3g046300 | 34.656 | 378 | 211 | 7 | 9 | 358 | 89 | 458 | 5.51e-66 | 216 |
| MS.gene29215.t1 | MTR_5g080890 | 36.034 | 358 | 203 | 11 | 16 | 358 | 85 | 431 | 7.62e-66 | 214 |
| MS.gene29215.t1 | MTR_5g080960 | 36.313 | 358 | 202 | 11 | 16 | 358 | 85 | 431 | 7.79e-66 | 214 |
| MS.gene29215.t1 | MTR_5g044770 | 35.393 | 356 | 205 | 11 | 16 | 358 | 85 | 428 | 5.03e-65 | 212 |
| MS.gene29215.t1 | MTR_3g053710 | 37.500 | 360 | 203 | 9 | 14 | 358 | 114 | 466 | 3.39e-64 | 211 |
| MS.gene29215.t1 | MTR_3g053980 | 40.278 | 360 | 197 | 9 | 9 | 358 | 134 | 485 | 9.31e-63 | 208 |
| MS.gene29215.t1 | MTR_2g028190 | 34.060 | 367 | 216 | 12 | 9 | 358 | 94 | 451 | 5.37e-59 | 197 |
| MS.gene29215.t1 | MTR_8g038280 | 33.426 | 359 | 213 | 12 | 16 | 358 | 85 | 433 | 1.09e-58 | 196 |
| MS.gene29215.t1 | MTR_5g091130 | 34.140 | 372 | 222 | 7 | 9 | 358 | 183 | 553 | 2.65e-57 | 195 |
| MS.gene29215.t1 | MTR_6g090290 | 34.916 | 358 | 210 | 10 | 16 | 358 | 85 | 434 | 7.41e-57 | 191 |
| MS.gene29215.t1 | MTR_2g067830 | 31.522 | 368 | 228 | 14 | 6 | 358 | 46 | 404 | 9.05e-55 | 185 |
| MS.gene29215.t1 | MTR_2g059460 | 33.795 | 361 | 205 | 13 | 17 | 358 | 59 | 404 | 2.96e-54 | 184 |
| MS.gene29215.t1 | MTR_2g105300 | 31.832 | 333 | 203 | 14 | 38 | 355 | 56 | 379 | 9.76e-52 | 176 |
| MS.gene29215.t1 | MTR_8g038250 | 33.425 | 362 | 189 | 16 | 16 | 358 | 85 | 413 | 2.67e-51 | 176 |
| MS.gene29215.t1 | MTR_2g059490 | 32.493 | 357 | 220 | 13 | 17 | 358 | 58 | 408 | 2.77e-51 | 177 |
| MS.gene29215.t1 | MTR_6g088760 | 32.047 | 337 | 201 | 12 | 7 | 325 | 78 | 404 | 3.00e-51 | 178 |
| MS.gene29215.t1 | MTR_3g028120 | 32.123 | 358 | 222 | 11 | 15 | 358 | 86 | 436 | 1.28e-50 | 175 |
| MS.gene29215.t1 | MTR_8g038310 | 32.687 | 361 | 208 | 12 | 7 | 358 | 77 | 411 | 2.64e-50 | 173 |
| MS.gene29215.t1 | MTR_0036s0110 | 30.769 | 377 | 218 | 15 | 8 | 358 | 81 | 440 | 1.02e-49 | 172 |
| MS.gene29215.t1 | MTR_0036s0070 | 31.638 | 354 | 213 | 12 | 16 | 358 | 89 | 424 | 1.88e-49 | 171 |
| MS.gene29215.t1 | MTR_4g109760 | 35.362 | 345 | 186 | 13 | 33 | 358 | 70 | 396 | 4.60e-49 | 170 |
| MS.gene29215.t1 | MTR_5g008110 | 32.493 | 357 | 218 | 11 | 16 | 358 | 66 | 413 | 1.37e-48 | 169 |
| MS.gene29215.t1 | MTR_5g008150 | 31.956 | 363 | 213 | 12 | 16 | 358 | 62 | 410 | 1.82e-48 | 169 |
| MS.gene29215.t1 | MTR_5g008070 | 32.514 | 366 | 221 | 12 | 7 | 358 | 71 | 424 | 2.13e-46 | 163 |
| MS.gene29215.t1 | MTR_5g038360 | 30.618 | 356 | 222 | 14 | 18 | 358 | 89 | 434 | 2.83e-46 | 163 |
| MS.gene29215.t1 | MTR_0036s0050 | 30.663 | 362 | 215 | 12 | 16 | 358 | 89 | 433 | 2.83e-46 | 163 |
| MS.gene29215.t1 | MTR_2g055840 | 31.421 | 366 | 220 | 12 | 18 | 358 | 14 | 373 | 3.24e-45 | 159 |
| MS.gene29215.t1 | MTR_3g100500 | 33.702 | 362 | 215 | 13 | 9 | 358 | 89 | 437 | 7.43e-43 | 154 |
| MS.gene29215.t1 | MTR_1g037630 | 33.333 | 354 | 211 | 9 | 15 | 358 | 90 | 428 | 1.00e-42 | 154 |
| MS.gene29215.t1 | MTR_0024s0040 | 29.810 | 369 | 234 | 13 | 5 | 358 | 50 | 408 | 2.63e-42 | 152 |
| MS.gene29215.t1 | MTR_3g014290 | 33.333 | 354 | 211 | 9 | 15 | 358 | 78 | 416 | 2.78e-42 | 152 |
| MS.gene29215.t1 | MTR_4g045857 | 37.327 | 217 | 124 | 6 | 17 | 221 | 58 | 274 | 1.67e-41 | 147 |
| MS.gene29215.t1 | MTR_5g044570 | 29.226 | 349 | 210 | 11 | 18 | 358 | 90 | 409 | 8.84e-41 | 148 |
| MS.gene29215.t1 | MTR_8g039540 | 33.048 | 351 | 217 | 9 | 15 | 358 | 94 | 433 | 1.57e-38 | 142 |
| MS.gene29215.t1 | MTR_2g070430 | 29.815 | 379 | 217 | 12 | 15 | 356 | 85 | 451 | 2.20e-36 | 137 |
| MS.gene29215.t1 | MTR_1g060750 | 28.846 | 364 | 203 | 14 | 14 | 358 | 48 | 374 | 2.44e-35 | 133 |
| MS.gene29215.t1 | MTR_7g102750 | 26.558 | 369 | 237 | 12 | 16 | 358 | 80 | 440 | 4.60e-31 | 123 |
| MS.gene29215.t1 | MTR_7g102750 | 27.326 | 344 | 216 | 12 | 16 | 333 | 80 | 415 | 1.43e-30 | 121 |
| MS.gene29215.t1 | MTR_3g068000 | 29.211 | 380 | 214 | 16 | 20 | 358 | 76 | 441 | 9.20e-30 | 119 |
| MS.gene29215.t1 | MTR_2g084550 | 28.329 | 353 | 206 | 17 | 16 | 335 | 76 | 414 | 1.59e-28 | 115 |
| MS.gene29215.t1 | MTR_7g105850 | 27.949 | 390 | 221 | 15 | 16 | 358 | 89 | 465 | 5.11e-28 | 114 |
| MS.gene29215.t1 | MTR_5g008090 | 30.164 | 305 | 183 | 10 | 72 | 358 | 20 | 312 | 8.00e-28 | 111 |
| MS.gene29215.t1 | MTR_5g016260 | 25.824 | 364 | 232 | 14 | 15 | 358 | 86 | 431 | 2.23e-27 | 113 |
| MS.gene29215.t1 | MTR_5g016260 | 25.824 | 364 | 232 | 14 | 15 | 358 | 86 | 431 | 4.62e-27 | 112 |
| MS.gene29215.t1 | MTR_4g095270 | 25.000 | 364 | 235 | 13 | 15 | 358 | 78 | 423 | 5.04e-27 | 112 |
| MS.gene29215.t1 | MTR_2g063110 | 26.119 | 402 | 242 | 13 | 9 | 358 | 110 | 508 | 6.39e-27 | 111 |
| MS.gene29215.t1 | MTR_4g056420 | 28.531 | 354 | 205 | 18 | 15 | 335 | 75 | 413 | 1.13e-26 | 110 |
| MS.gene29215.t1 | MTR_4g095270 | 25.000 | 364 | 235 | 13 | 15 | 358 | 78 | 423 | 1.17e-26 | 111 |
| MS.gene29215.t1 | MTR_4g100990 | 27.654 | 405 | 210 | 19 | 22 | 358 | 81 | 470 | 1.79e-26 | 110 |
| MS.gene29215.t1 | MTR_8g094590 | 25.984 | 381 | 234 | 15 | 7 | 358 | 63 | 424 | 1.78e-25 | 106 |
| MS.gene29215.t1 | MTR_7g062360 | 28.800 | 375 | 220 | 18 | 20 | 358 | 62 | 425 | 3.07e-25 | 106 |
| MS.gene29215.t1 | MTR_1g078240 | 25.781 | 384 | 237 | 15 | 9 | 358 | 61 | 430 | 4.07e-25 | 106 |
| MS.gene29215.t1 | MTR_5g012490 | 25.990 | 404 | 229 | 17 | 17 | 358 | 74 | 469 | 4.20e-25 | 106 |
| MS.gene29215.t1 | MTR_3g065160 | 26.902 | 368 | 222 | 15 | 20 | 358 | 77 | 426 | 2.11e-24 | 103 |
| MS.gene29215.t1 | MTR_1g078240 | 27.356 | 329 | 197 | 14 | 9 | 309 | 61 | 375 | 2.12e-24 | 103 |
| MS.gene29215.t1 | MTR_7g021510 | 23.885 | 381 | 248 | 14 | 9 | 358 | 64 | 433 | 4.09e-24 | 103 |
| MS.gene29215.t1 | MTR_1g078240 | 25.781 | 384 | 236 | 16 | 9 | 358 | 61 | 429 | 5.51e-24 | 102 |
| MS.gene29215.t1 | MTR_1g061940 | 26.136 | 352 | 220 | 12 | 14 | 335 | 80 | 421 | 2.70e-23 | 101 |
| MS.gene29215.t1 | MTR_5g077850 | 25.613 | 367 | 232 | 13 | 20 | 358 | 84 | 437 | 5.18e-22 | 97.1 |
| MS.gene29215.t1 | MTR_8g094590 | 26.012 | 346 | 212 | 14 | 7 | 327 | 63 | 389 | 8.62e-22 | 95.9 |
| MS.gene29215.t1 | MTR_7g080230 | 25.067 | 375 | 239 | 15 | 9 | 353 | 63 | 425 | 8.89e-22 | 96.7 |
| MS.gene29215.t1 | MTR_8g094590 | 29.119 | 261 | 154 | 10 | 7 | 254 | 63 | 305 | 1.94e-21 | 93.6 |
| MS.gene29215.t1 | MTR_5g022880 | 24.800 | 375 | 222 | 14 | 18 | 358 | 113 | 461 | 8.33e-20 | 90.9 |
| MS.gene29215.t1 | MTR_3g096930 | 25.849 | 383 | 231 | 17 | 7 | 358 | 74 | 434 | 1.15e-19 | 90.1 |
| MS.gene29215.t1 | MTR_8g075010 | 23.913 | 368 | 234 | 15 | 18 | 358 | 101 | 449 | 1.78e-18 | 87.0 |
| MS.gene29215.t1 | MTR_6g084710 | 24.352 | 386 | 242 | 16 | 7 | 358 | 181 | 550 | 1.21e-17 | 84.7 |
| MS.gene29215.t1 | MTR_5g061690 | 27.151 | 372 | 216 | 18 | 18 | 358 | 102 | 449 | 1.42e-17 | 84.3 |
| MS.gene29215.t1 | MTR_6g084710 | 25.954 | 262 | 163 | 10 | 7 | 251 | 181 | 428 | 1.62e-17 | 84.0 |
| MS.gene29215.t1 | MTR_5g077920 | 25.466 | 322 | 212 | 11 | 20 | 320 | 71 | 385 | 1.80e-17 | 83.6 |
| MS.gene29215.t1 | MTR_3g087780 | 23.706 | 367 | 238 | 11 | 18 | 358 | 100 | 450 | 3.69e-16 | 80.1 |
| MS.gene29215.t1 | MTR_2g022450 | 23.604 | 394 | 239 | 18 | 12 | 357 | 35 | 414 | 1.43e-14 | 74.7 |
| MS.gene29215.t1 | MTR_3g006820 | 22.368 | 380 | 244 | 14 | 11 | 358 | 52 | 412 | 1.61e-14 | 74.7 |
| MS.gene29215.t1 | MTR_5g080330 | 23.919 | 347 | 218 | 16 | 33 | 358 | 1 | 322 | 1.86e-11 | 65.5 |
| MS.gene29215.t1 | MTR_5g061690 | 26.861 | 309 | 182 | 15 | 71 | 358 | 25 | 310 | 2.31e-11 | 65.1 |
| MS.gene29215.t1 | MTR_4g008110 | 43.750 | 80 | 39 | 2 | 89 | 162 | 45 | 124 | 9.23e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29215.t1 | AT3G20015 | 70.571 | 350 | 102 | 1 | 9 | 358 | 122 | 470 | 1.22e-169 | 481 |
| MS.gene29215.t1 | AT3G18490 | 51.420 | 352 | 165 | 4 | 9 | 358 | 153 | 500 | 5.91e-120 | 356 |
| MS.gene29215.t1 | AT1G25510 | 49.573 | 351 | 172 | 3 | 8 | 358 | 138 | 483 | 6.96e-116 | 345 |
| MS.gene29215.t1 | AT3G61820 | 50.139 | 359 | 169 | 4 | 9 | 358 | 126 | 483 | 2.85e-112 | 335 |
| MS.gene29215.t1 | AT1G01300 | 51.695 | 354 | 165 | 5 | 9 | 358 | 133 | 484 | 1.57e-111 | 334 |
| MS.gene29215.t1 | AT5G10770 | 38.936 | 357 | 203 | 7 | 10 | 358 | 124 | 473 | 4.68e-76 | 242 |
| MS.gene29215.t1 | AT2G03200 | 37.260 | 365 | 206 | 12 | 11 | 358 | 100 | 458 | 6.03e-70 | 226 |
| MS.gene29215.t1 | AT5G10760 | 37.960 | 353 | 205 | 7 | 9 | 358 | 123 | 464 | 3.21e-63 | 209 |
| MS.gene29215.t1 | AT5G33340 | 34.153 | 366 | 221 | 9 | 5 | 358 | 77 | 434 | 1.52e-62 | 206 |
| MS.gene29215.t1 | AT1G79720 | 35.083 | 362 | 208 | 7 | 9 | 353 | 126 | 477 | 4.39e-60 | 201 |
| MS.gene29215.t1 | AT3G59080 | 32.976 | 373 | 226 | 8 | 9 | 358 | 161 | 532 | 1.09e-55 | 191 |
| MS.gene29215.t1 | AT1G64830 | 34.605 | 367 | 212 | 13 | 7 | 358 | 75 | 428 | 3.31e-55 | 187 |
| MS.gene29215.t1 | AT2G42980 | 33.245 | 376 | 223 | 10 | 9 | 358 | 151 | 524 | 2.66e-54 | 187 |
| MS.gene29215.t1 | AT3G25700 | 32.447 | 376 | 227 | 11 | 9 | 358 | 75 | 449 | 3.82e-54 | 184 |
| MS.gene29215.t1 | AT2G28040 | 32.964 | 361 | 209 | 10 | 7 | 358 | 45 | 381 | 8.47e-54 | 182 |
| MS.gene29215.t1 | AT2G28040 | 32.964 | 361 | 209 | 10 | 7 | 358 | 54 | 390 | 1.10e-53 | 182 |
| MS.gene29215.t1 | AT1G09750 | 31.667 | 360 | 230 | 9 | 9 | 358 | 95 | 448 | 4.60e-51 | 176 |
| MS.gene29215.t1 | AT3G54400 | 34.091 | 352 | 212 | 10 | 15 | 358 | 85 | 424 | 7.57e-51 | 175 |
| MS.gene29215.t1 | AT2G28010 | 31.025 | 361 | 217 | 8 | 7 | 358 | 54 | 391 | 4.12e-50 | 172 |
| MS.gene29215.t1 | AT2G28030 | 30.748 | 361 | 218 | 8 | 7 | 358 | 50 | 387 | 1.50e-48 | 168 |
| MS.gene29215.t1 | AT3G59080 | 31.793 | 368 | 201 | 8 | 9 | 358 | 161 | 496 | 1.23e-46 | 166 |
| MS.gene29215.t1 | AT2G28220 | 30.163 | 368 | 215 | 10 | 7 | 358 | 56 | 397 | 2.00e-45 | 160 |
| MS.gene29215.t1 | AT1G31450 | 30.933 | 375 | 225 | 14 | 9 | 358 | 76 | 441 | 1.44e-42 | 154 |
| MS.gene29215.t1 | AT2G35615 | 29.459 | 370 | 225 | 14 | 16 | 358 | 83 | 443 | 1.79e-41 | 150 |
| MS.gene29215.t1 | AT2G28225 | 29.730 | 370 | 214 | 12 | 7 | 358 | 56 | 397 | 1.12e-40 | 147 |
| MS.gene29215.t1 | AT4G30040 | 31.073 | 354 | 215 | 10 | 18 | 353 | 85 | 427 | 8.05e-40 | 146 |
| MS.gene29215.t1 | AT5G07030 | 33.053 | 357 | 212 | 10 | 15 | 358 | 112 | 454 | 8.93e-39 | 144 |
| MS.gene29215.t1 | AT2G23945 | 30.183 | 328 | 195 | 13 | 18 | 325 | 96 | 409 | 3.31e-36 | 137 |
| MS.gene29215.t1 | AT4G30030 | 30.471 | 361 | 212 | 15 | 18 | 358 | 78 | 419 | 5.71e-33 | 127 |
| MS.gene29215.t1 | AT5G43100 | 27.473 | 364 | 227 | 13 | 14 | 358 | 72 | 417 | 1.21e-32 | 127 |
| MS.gene29215.t1 | AT2G36670 | 27.586 | 348 | 213 | 13 | 16 | 335 | 98 | 434 | 2.82e-32 | 127 |
| MS.gene29215.t1 | AT2G36670 | 27.457 | 346 | 212 | 13 | 18 | 335 | 34 | 368 | 3.17e-32 | 125 |
| MS.gene29215.t1 | AT2G36670 | 27.457 | 346 | 212 | 13 | 18 | 335 | 34 | 368 | 3.17e-32 | 125 |
| MS.gene29215.t1 | AT5G43100 | 27.473 | 364 | 227 | 13 | 14 | 358 | 72 | 417 | 5.40e-32 | 127 |
| MS.gene29215.t1 | AT2G36670 | 27.457 | 346 | 212 | 13 | 18 | 335 | 105 | 439 | 5.50e-32 | 126 |
| MS.gene29215.t1 | AT3G02740 | 27.733 | 375 | 227 | 15 | 13 | 358 | 80 | 439 | 1.00e-31 | 125 |
| MS.gene29215.t1 | AT3G12700 | 28.184 | 369 | 241 | 13 | 9 | 358 | 97 | 460 | 1.05e-31 | 124 |
| MS.gene29215.t1 | AT3G02740 | 27.869 | 366 | 228 | 15 | 18 | 358 | 10 | 364 | 1.98e-31 | 123 |
| MS.gene29215.t1 | AT2G39710 | 28.571 | 378 | 215 | 16 | 20 | 357 | 67 | 429 | 1.83e-30 | 120 |
| MS.gene29215.t1 | AT3G50050 | 28.056 | 360 | 230 | 13 | 15 | 358 | 90 | 436 | 1.60e-28 | 117 |
| MS.gene29215.t1 | AT5G36260 | 25.474 | 369 | 238 | 13 | 16 | 358 | 76 | 433 | 1.89e-28 | 115 |
| MS.gene29215.t1 | AT1G05840 | 26.963 | 382 | 233 | 15 | 9 | 358 | 71 | 438 | 2.60e-28 | 115 |
| MS.gene29215.t1 | AT5G37540 | 27.368 | 380 | 242 | 12 | 5 | 358 | 67 | 438 | 1.12e-27 | 113 |
| MS.gene29215.t1 | AT1G66180 | 27.704 | 379 | 238 | 13 | 5 | 358 | 59 | 426 | 2.45e-27 | 112 |
| MS.gene29215.t1 | AT5G22850 | 28.286 | 350 | 210 | 14 | 16 | 335 | 79 | 417 | 2.31e-26 | 110 |
| MS.gene29215.t1 | AT1G65240 | 25.926 | 378 | 222 | 17 | 16 | 358 | 72 | 426 | 6.86e-26 | 108 |
| MS.gene29215.t1 | AT5G02190 | 28.184 | 369 | 208 | 18 | 33 | 358 | 88 | 442 | 2.06e-24 | 103 |
| MS.gene29215.t1 | AT3G52500 | 27.506 | 389 | 227 | 14 | 16 | 358 | 88 | 467 | 2.11e-24 | 104 |
| MS.gene29215.t1 | AT4G12920 | 28.177 | 362 | 204 | 12 | 7 | 345 | 46 | 374 | 4.33e-23 | 99.8 |
| MS.gene29215.t1 | AT1G08210 | 27.224 | 371 | 230 | 16 | 16 | 358 | 116 | 474 | 1.68e-22 | 99.0 |
| MS.gene29215.t1 | AT1G08210 | 27.224 | 371 | 230 | 16 | 16 | 358 | 82 | 440 | 1.96e-22 | 98.6 |
| MS.gene29215.t1 | AT1G08210 | 27.224 | 371 | 230 | 16 | 16 | 358 | 130 | 488 | 1.96e-22 | 99.0 |
| MS.gene29215.t1 | AT5G45120 | 22.829 | 403 | 242 | 14 | 18 | 358 | 83 | 478 | 3.85e-22 | 97.8 |
| MS.gene29215.t1 | AT1G08210 | 28.527 | 319 | 191 | 14 | 16 | 309 | 82 | 388 | 8.24e-22 | 97.1 |
| MS.gene29215.t1 | AT1G77480 | 26.943 | 386 | 226 | 20 | 7 | 358 | 56 | 419 | 2.95e-19 | 89.0 |
| MS.gene29215.t1 | AT4G16563 | 27.889 | 398 | 207 | 16 | 35 | 358 | 100 | 491 | 3.02e-19 | 89.4 |
| MS.gene29215.t1 | AT1G77480 | 26.943 | 386 | 226 | 20 | 7 | 358 | 56 | 419 | 3.87e-19 | 89.0 |
| MS.gene29215.t1 | AT4G33490 | 28.788 | 264 | 150 | 12 | 7 | 253 | 46 | 288 | 6.25e-19 | 87.8 |
| MS.gene29215.t1 | AT4G33490 | 24.806 | 387 | 232 | 18 | 7 | 358 | 49 | 411 | 6.74e-19 | 87.8 |
| MS.gene29215.t1 | AT1G49050 | 23.747 | 379 | 238 | 18 | 18 | 358 | 30 | 395 | 9.33e-19 | 87.4 |
| MS.gene29215.t1 | AT3G51340 | 25.886 | 367 | 224 | 18 | 18 | 358 | 103 | 447 | 3.56e-17 | 83.2 |
| MS.gene29215.t1 | AT3G25700 | 32.500 | 160 | 94 | 5 | 9 | 154 | 75 | 234 | 3.64e-17 | 82.0 |
| MS.gene29215.t1 | AT4G35880 | 24.217 | 351 | 224 | 14 | 18 | 345 | 107 | 438 | 1.03e-16 | 81.6 |
| MS.gene29215.t1 | AT3G51350 | 24.528 | 371 | 230 | 17 | 18 | 358 | 102 | 452 | 3.46e-16 | 80.1 |
| MS.gene29215.t1 | AT4G35880 | 23.894 | 339 | 216 | 13 | 18 | 333 | 107 | 426 | 7.42e-16 | 79.0 |
| MS.gene29215.t1 | AT1G44130 | 25.000 | 384 | 234 | 18 | 7 | 358 | 38 | 399 | 1.61e-15 | 77.8 |
| MS.gene29215.t1 | AT3G42550 | 24.930 | 357 | 213 | 15 | 15 | 358 | 75 | 389 | 6.76e-15 | 75.9 |
| MS.gene29215.t1 | AT3G51340 | 25.786 | 318 | 192 | 15 | 18 | 312 | 103 | 399 | 9.05e-15 | 75.5 |
| MS.gene29215.t1 | AT3G51360 | 26.774 | 310 | 190 | 14 | 9 | 298 | 80 | 372 | 6.24e-14 | 73.2 |
| MS.gene29215.t1 | AT3G51360 | 25.201 | 373 | 239 | 16 | 9 | 358 | 90 | 445 | 6.48e-14 | 73.2 |
| MS.gene29215.t1 | AT3G51360 | 26.061 | 330 | 207 | 14 | 9 | 318 | 80 | 392 | 7.81e-14 | 72.4 |
| MS.gene29215.t1 | AT3G51360 | 26.774 | 310 | 190 | 14 | 9 | 298 | 80 | 372 | 9.85e-14 | 72.4 |
| MS.gene29215.t1 | AT3G51360 | 26.774 | 310 | 190 | 14 | 9 | 298 | 90 | 382 | 1.23e-13 | 72.0 |
| MS.gene29215.t1 | AT5G10080 | 23.810 | 378 | 227 | 16 | 18 | 358 | 100 | 453 | 1.25e-13 | 72.4 |
| MS.gene29215.t1 | AT3G51360 | 26.061 | 330 | 207 | 14 | 9 | 318 | 90 | 402 | 1.27e-13 | 72.0 |
| MS.gene29215.t1 | AT3G51340 | 25.000 | 288 | 177 | 13 | 18 | 282 | 103 | 374 | 3.86e-13 | 70.5 |
| MS.gene29215.t1 | AT3G51340 | 25.175 | 286 | 175 | 13 | 18 | 280 | 103 | 372 | 9.85e-13 | 69.7 |
| MS.gene29215.t1 | AT3G51360 | 26.246 | 301 | 185 | 14 | 18 | 298 | 5 | 288 | 1.17e-12 | 68.9 |
| MS.gene29215.t1 | AT3G51360 | 26.894 | 264 | 158 | 12 | 9 | 254 | 90 | 336 | 4.68e-11 | 63.9 |
Find 114 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAATATTTGTTCGGATA+TGG | 0.122611 | 1.1:+23714803 | None:intergenic |
| GCTACTTCTGCTTCGTTTAT+TGG | 0.138095 | 1.1:-23716391 | MS.gene29215:CDS |
| TTCTACTACGTCTCACTTTC+GGG | 0.179528 | 1.1:-23714852 | MS.gene29215:CDS |
| CTACTTCTGCTTCGTTTATT+GGG | 0.181833 | 1.1:-23716390 | MS.gene29215:CDS |
| GATATCCACACCTCCCTTTC+CGG | 0.230477 | 1.1:+23716317 | None:intergenic |
| ATCCAAAGGCTCCGCCGGTT+TGG | 0.265743 | 1.1:+23714988 | None:intergenic |
| CTTCTACTACGTCTCACTTT+CGG | 0.273039 | 1.1:-23714853 | MS.gene29215:CDS |
| CCCTCTGGTCTTTCCATCAT+AGG | 0.282371 | 1.1:-23714483 | MS.gene29215:CDS |
| TCCAAAGGCTCCGCCGGTTT+GGG | 0.283928 | 1.1:+23714989 | None:intergenic |
| GGAATGTTTGTTGGAGCAGC+TGG | 0.314111 | 1.1:-23715062 | MS.gene29215:CDS |
| ATTCAGGAAGTGATATTGTT+TGG | 0.328169 | 1.1:-23716471 | MS.gene29215:CDS |
| GCCCAAACCGGCGGAGCCTT+TGG | 0.328588 | 1.1:-23714990 | MS.gene29215:CDS |
| GTTTCTATCGATGGAACTAA+TGG | 0.337355 | 1.1:-23714435 | MS.gene29215:CDS |
| AACGGTCCGCCCGATGGTTA+TGG | 0.339939 | 1.1:+23715124 | None:intergenic |
| TATGTCTTTCGTGGGCCAAT+TGG | 0.346916 | 1.1:-23715015 | MS.gene29215:CDS |
| GTTGGAGCAGCTGGGTTGTT+AGG | 0.347858 | 1.1:-23715053 | MS.gene29215:CDS |
| CGCCGGTTTGGGCTCCCAAT+TGG | 0.356798 | 1.1:+23715000 | None:intergenic |
| TGAAATATTTGTTCGGATAT+GGG | 0.367001 | 1.1:+23714804 | None:intergenic |
| GCATTTGCTCCTTCACCCTC+TGG | 0.370463 | 1.1:-23714498 | MS.gene29215:CDS |
| TCCTGCTATTTATCAGTATA+TGG | 0.379135 | 1.1:-23716500 | MS.gene29215:CDS |
| ATGTCTTTCGTGGGCCAATT+GGG | 0.379833 | 1.1:-23715014 | MS.gene29215:CDS |
| CAGTATATGGTGATAGATTC+AGG | 0.394103 | 1.1:-23716487 | MS.gene29215:CDS |
| ATATTTCAGTTAACTGATAT+AGG | 0.421183 | 1.1:-23714789 | MS.gene29215:CDS |
| TCACTTTCGGGTCTTGCAGT+TGG | 0.424557 | 1.1:-23714840 | MS.gene29215:CDS |
| CTTTCGGGTCTTGCAGTTGG+AGG | 0.428746 | 1.1:-23714837 | MS.gene29215:CDS |
| TCATCCGGTTCACTCGAATT+CGG | 0.429351 | 1.1:-23714939 | MS.gene29215:CDS |
| TGGAACGAGGGAATGTTTGT+TGG | 0.432846 | 1.1:-23715071 | MS.gene29215:CDS |
| TTGCTGAATATTCCCTATGA+TGG | 0.435218 | 1.1:+23714470 | None:intergenic |
| TTGATGATGATGTTGCTTGC+CGG | 0.437671 | 1.1:-23716336 | MS.gene29215:CDS |
| CAGTTAACTGATATAGGAAC+CGG | 0.438789 | 1.1:-23714783 | MS.gene29215:CDS |
| GCAGCTGGGTTGTTAGGCCT+CGG | 0.440728 | 1.1:-23715047 | MS.gene29215:CDS |
| TTGCACCTACGGGCATTGCT+TGG | 0.450316 | 1.1:+23714913 | None:intergenic |
| TGCATCGCGAAAAGCATTGT+AGG | 0.452930 | 1.1:+23714710 | None:intergenic |
| CTGCAATCGGGTGCGGACAT+TGG | 0.452938 | 1.1:-23715091 | MS.gene29215:CDS |
| TGTCTTATCTCTCGAGGCAC+TGG | 0.460971 | 1.1:-23714963 | MS.gene29215:CDS |
| GGCCAATTGGGAGCCCAAAC+CGG | 0.466739 | 1.1:-23715002 | MS.gene29215:CDS |
| TAGTAGAAGCTAGGGTAGAA+TGG | 0.467116 | 1.1:+23714867 | None:intergenic |
| AGTTAACTGAAATATTTGTT+CGG | 0.472372 | 1.1:+23714797 | None:intergenic |
| TTCTGCTTCGTTTATTGGGG+TGG | 0.480733 | 1.1:-23716386 | MS.gene29215:CDS |
| GGAATTCAAGTTTCTATCGA+TGG | 0.482938 | 1.1:-23714444 | MS.gene29215:CDS |
| TGTTTGCTTCAACACACATT+GGG | 0.485439 | 1.1:+23714396 | None:intergenic |
| TTGATCCCGGCCGATGATGT+TGG | 0.486689 | 1.1:-23714534 | MS.gene29215:CDS |
| GATTGCAGTGTCCTTGATAA+CGG | 0.491062 | 1.1:+23715106 | None:intergenic |
| AGTGAGACGTAGTAGAAGCT+AGG | 0.502354 | 1.1:+23714858 | None:intergenic |
| GTTATCAAGGACACTGCAAT+CGG | 0.503421 | 1.1:-23715104 | MS.gene29215:CDS |
| AAATCTTGACCTTTCCAGCC+AGG | 0.503991 | 1.1:-23714563 | MS.gene29215:CDS |
| GGGTTGTTAGGCCTCGGAGG+TGG | 0.505394 | 1.1:-23715041 | MS.gene29215:CDS |
| GCGTCCGAATTCGAGTGAAC+CGG | 0.505443 | 1.1:+23714935 | None:intergenic |
| GTGAGACGTAGTAGAAGCTA+GGG | 0.505740 | 1.1:+23714859 | None:intergenic |
| AGGTGGACCTATGTCTTTCG+TGG | 0.506441 | 1.1:-23715024 | MS.gene29215:CDS |
| ATAAACGAAGCAGAAGTAGC+AGG | 0.508250 | 1.1:+23716394 | None:intergenic |
| TCTCGAGGCACTGGATCATC+CGG | 0.510100 | 1.1:-23714954 | MS.gene29215:CDS |
| CTCTTGAAACCATAACCATC+GGG | 0.512781 | 1.1:-23715133 | MS.gene29215:CDS |
| CATCGGGCGGACCGTTATCA+AGG | 0.514418 | 1.1:-23715117 | MS.gene29215:CDS |
| AGGAACCCACATTGCACCTA+CGG | 0.516231 | 1.1:+23714902 | None:intergenic |
| CCTCTGGTCTTTCCATCATA+GGG | 0.517585 | 1.1:-23714482 | MS.gene29215:CDS |
| AGTAGAAGCTAGGGTAGAAT+GGG | 0.521476 | 1.1:+23714868 | None:intergenic |
| CTTGATAACGGTCCGCCCGA+TGG | 0.523145 | 1.1:+23715118 | None:intergenic |
| ATGATGTTGCTTGCCGGAAA+GGG | 0.527421 | 1.1:-23716330 | MS.gene29215:CDS |
| AAAGTTCCAACATCATCGGC+CGG | 0.529607 | 1.1:+23714528 | None:intergenic |
| AACAGTAGGTAACCTGGTAA+TGG | 0.534799 | 1.1:+23714734 | None:intergenic |
| ACAGTATCCAAAGGCTCCGC+CGG | 0.535096 | 1.1:+23714983 | None:intergenic |
| GTAGTTTCAGGCACTGAAGA+AGG | 0.536968 | 1.1:-23716559 | MS.gene29215:intron |
| TACTTCTGCTTCGTTTATTG+GGG | 0.538816 | 1.1:-23716389 | MS.gene29215:CDS |
| GGAACCCACATTGCACCTAC+GGG | 0.543677 | 1.1:+23714903 | None:intergenic |
| ACCATATACTGATAAATAGC+AGG | 0.551497 | 1.1:+23716499 | None:intergenic |
| GAATGTTTGTTGGAGCAGCT+GGG | 0.555216 | 1.1:-23715061 | MS.gene29215:CDS |
| GCTCTTGAAACCATAACCAT+CGG | 0.557569 | 1.1:-23715134 | MS.gene29215:CDS |
| TTGCTTTGGATACAGGGATG+TGG | 0.559044 | 1.1:+23717101 | None:intergenic |
| GACACGTGTTATGACTTGAA+CGG | 0.559620 | 1.1:-23714636 | MS.gene29215:CDS |
| GAAATATTTGTTCGGATATG+GGG | 0.560097 | 1.1:+23714805 | None:intergenic |
| AATTGGCCCACGAAAGACAT+AGG | 0.560178 | 1.1:+23715017 | None:intergenic |
| TGTGGATATCAAGTTGCATA+TGG | 0.560299 | 1.1:-23716304 | MS.gene29215:CDS |
| GGTGTCCATGACAACTCCTC+CGG | 0.560381 | 1.1:+23714764 | None:intergenic |
| TAGAATGGGTTATGAATGAG+AGG | 0.562092 | 1.1:+23714882 | None:intergenic |
| ACACCGGCACAGCCATTACC+AGG | 0.562171 | 1.1:-23714746 | MS.gene29215:CDS |
| GATGATGTTGCTTGCCGGAA+AGG | 0.565770 | 1.1:-23716331 | MS.gene29215:CDS |
| ATGTTTGCTTCAACACACAT+TGG | 0.570489 | 1.1:+23714395 | None:intergenic |
| AAGTTCCAACATCATCGGCC+GGG | 0.575288 | 1.1:+23714529 | None:intergenic |
| ATCAAGTTGCATATGGTGAT+GGG | 0.575723 | 1.1:-23716297 | MS.gene29215:CDS |
| TCAGGCACTGAAGAAGGAAG+TGG | 0.583731 | 1.1:-23716553 | MS.gene29215:CDS |
| AAGGACACTGCAATCGGGTG+CGG | 0.585643 | 1.1:-23715098 | MS.gene29215:CDS |
| TATCAAGTTGCATATGGTGA+TGG | 0.587507 | 1.1:-23716298 | MS.gene29215:CDS |
| GGATACTGTCTTATCTCTCG+AGG | 0.592311 | 1.1:-23714969 | MS.gene29215:CDS |
| ACAGAAAGTTCCAACATCAT+CGG | 0.592640 | 1.1:+23714524 | None:intergenic |
| TAAACGAAGCAGAAGTAGCA+GGG | 0.592676 | 1.1:+23716395 | None:intergenic |
| ATGGAAAGACCAGAGGGTGA+AGG | 0.594528 | 1.1:+23714489 | None:intergenic |
| GGTGGACCTATGTCTTTCGT+GGG | 0.595416 | 1.1:-23715023 | MS.gene29215:CDS |
| TGATTATAACATTGATCACA+AGG | 0.597383 | 1.1:+23716436 | None:intergenic |
| ATAGGGAATATTCAGCAAGA+AGG | 0.599831 | 1.1:-23714465 | MS.gene29215:CDS |
| TAACCTGGTAATGGCTGTGC+CGG | 0.602170 | 1.1:+23714743 | None:intergenic |
| AAAGCATTGTAGGCAACAGT+AGG | 0.603981 | 1.1:+23714720 | None:intergenic |
| GTAGGCAACAGTAGGTAACC+TGG | 0.609612 | 1.1:+23714728 | None:intergenic |
| AGGAACCGGAGGAGTTGTCA+TGG | 0.611224 | 1.1:-23714769 | MS.gene29215:CDS |
| TTATCAAGGACACTGCAATC+GGG | 0.611505 | 1.1:-23715103 | MS.gene29215:CDS |
| CAATGCCCGTAGGTGCAATG+TGG | 0.615447 | 1.1:-23714908 | MS.gene29215:CDS |
| GGAGGAGTTGTCATGGACAC+CGG | 0.619800 | 1.1:-23714762 | MS.gene29215:CDS |
| AATGCCCGTAGGTGCAATGT+GGG | 0.625127 | 1.1:-23714907 | MS.gene29215:CDS |
| GGTGATGGGTCGTCTACCAA+AGG | 0.626771 | 1.1:-23716283 | MS.gene29215:intron |
| CCCTATGATGGAAAGACCAG+AGG | 0.627903 | 1.1:+23714482 | None:intergenic |
| ATAGAAACTCTGGGAGCACG+TGG | 0.629230 | 1.1:+23714663 | None:intergenic |
| CGACACTGTTGGAACTCGAA+CGG | 0.632988 | 1.1:+23714605 | None:intergenic |
| GGACGCCAAGCAATGCCCGT+AGG | 0.637191 | 1.1:-23714918 | MS.gene29215:CDS |
| GCTGGGTTGTTAGGCCTCGG+AGG | 0.647032 | 1.1:-23715044 | MS.gene29215:CDS |
| ATGTTGCTTGCCGGAAAGGG+AGG | 0.650168 | 1.1:-23716327 | MS.gene29215:CDS |
| GGGTGCGGACATTGGAACGA+GGG | 0.652299 | 1.1:-23715083 | MS.gene29215:CDS |
| CAATTGGGAGCCCAAACCGG+CGG | 0.653313 | 1.1:-23714999 | MS.gene29215:CDS |
| CGGGTGCGGACATTGGAACG+AGG | 0.653686 | 1.1:-23715084 | MS.gene29215:CDS |
| CCTATGATGGAAAGACCAGA+GGG | 0.661561 | 1.1:+23714483 | None:intergenic |
| AGAGATAAGACAGTATCCAA+AGG | 0.673865 | 1.1:+23714974 | None:intergenic |
| TTAACTGATATAGGAACCGG+AGG | 0.677821 | 1.1:-23714780 | MS.gene29215:CDS |
| AAGACATAGGTCCACCTCCG+AGG | 0.695349 | 1.1:+23715030 | None:intergenic |
| TTGAAACCATAACCATCGGG+CGG | 0.703144 | 1.1:-23715130 | MS.gene29215:CDS |
| GCTTGCCGGAAAGGGAGGTG+TGG | 0.712007 | 1.1:-23716322 | MS.gene29215:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAAAATTTTAAAATCAAT+TGG | + | chr1.1:23716230-23716249 | None:intergenic | 10.0% |
| !! | AAAATAAAGTGATTTATGTT+TGG | + | chr1.1:23716161-23716180 | None:intergenic | 15.0% |
| !! | TGATAAAGAATTAATTGTAA+AGG | - | chr1.1:23715897-23715916 | MS.gene29215:intron | 15.0% |
| !!! | AAGTTAGAATTTTTAGATTA+TGG | - | chr1.1:23715994-23716013 | MS.gene29215:intron | 15.0% |
| !!! | TTTTAGATGATGTTTATATT+AGG | - | chr1.1:23715372-23715391 | MS.gene29215:intron | 15.0% |
| !! | AGTTAACTGAAATATTTGTT+CGG | + | chr1.1:23716723-23716742 | None:intergenic | 20.0% |
| !! | ATATTTCAGTTAACTGATAT+AGG | - | chr1.1:23716728-23716747 | MS.gene29215:intron | 20.0% |
| !! | TCTAAAAGAGTAGAATAAAA+TGG | - | chr1.1:23716307-23716326 | MS.gene29215:CDS | 20.0% |
| !! | TGTCTTTATAATCTGATTAT+TGG | - | chr1.1:23716334-23716353 | MS.gene29215:CDS | 20.0% |
| !!! | AGACAAAATTGATTCTAAAA+GGG | - | chr1.1:23715409-23715428 | MS.gene29215:intron | 20.0% |
| !!! | ATTAGCTTGATTCTATAAAA+TGG | + | chr1.1:23716203-23716222 | None:intergenic | 20.0% |
| !!! | ATTGTAGTTGTTGTTTTTTT+TGG | + | chr1.1:23714446-23714465 | None:intergenic | 20.0% |
| !!! | TATATTAGGTTGTATTTTAG+AGG | - | chr1.1:23715386-23715405 | MS.gene29215:intron | 20.0% |
| !!! | TGTATGTTTGGTTTTATTTT+TGG | - | chr1.1:23715873-23715892 | MS.gene29215:intron | 20.0% |
| ! | AAAGAGTAGAATAAAATGGA+TGG | - | chr1.1:23716311-23716330 | MS.gene29215:CDS | 25.0% |
| ! | TGAAATATTTGTTCGGATAT+GGG | + | chr1.1:23716716-23716735 | None:intergenic | 25.0% |
| ! | TGATTATAACATTGATCACA+AGG | + | chr1.1:23715084-23715103 | None:intergenic | 25.0% |
| !! | GAGACAAAATTGATTCTAAA+AGG | - | chr1.1:23715408-23715427 | MS.gene29215:intron | 25.0% |
| !! | TATTTTGTACGAATAGGAAT+TGG | - | chr1.1:23714991-23715010 | MS.gene29215:CDS | 25.0% |
| !! | TTAGTGTTGTTATTAGGATT+AGG | + | chr1.1:23714618-23714637 | None:intergenic | 25.0% |
| !!! | AATTATCATTTGCCCTTTTT+TGG | + | chr1.1:23715785-23715804 | None:intergenic | 25.0% |
| !!! | GAATTTTTAGATTATGGCTA+AGG | - | chr1.1:23716000-23716019 | MS.gene29215:intron | 25.0% |
| !!! | GGTGTAAAATTGATTTTGAT+AGG | - | chr1.1:23715918-23715937 | MS.gene29215:intron | 25.0% |
| !!! | TGGTTTTTTTGGTGTTTTTA+AGG | + | chr1.1:23714801-23714820 | None:intergenic | 25.0% |
| !!! | TGTTTTAAGTACATTGTTCA+AGG | + | chr1.1:23716115-23716134 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGGATGTTTGCTT+TGG | + | chr1.1:23714433-23714452 | None:intergenic | 25.0% |
| AACAAAGCAAGAAAAATGTG+TGG | + | chr1.1:23715295-23715314 | None:intergenic | 30.0% | |
| ACCATATACTGATAAATAGC+AGG | + | chr1.1:23715021-23715040 | None:intergenic | 30.0% | |
| ACTTAATCGCTTAGAAATCA+TGG | + | chr1.1:23715573-23715592 | None:intergenic | 30.0% | |
| ATTCACATTGAGTGTATGTT+TGG | - | chr1.1:23715861-23715880 | MS.gene29215:intron | 30.0% | |
| ATTCAGGAAGTGATATTGTT+TGG | - | chr1.1:23715046-23715065 | MS.gene29215:CDS | 30.0% | |
| CACCAAACATAACCAAAAAA+GGG | - | chr1.1:23715770-23715789 | MS.gene29215:intron | 30.0% | |
| CTGAAATATTTGTTCGGATA+TGG | + | chr1.1:23716717-23716736 | None:intergenic | 30.0% | |
| GAAAAATAAAACGACACTGT+TGG | + | chr1.1:23716926-23716945 | None:intergenic | 30.0% | |
| GAAATATTTGTTCGGATATG+GGG | + | chr1.1:23716715-23716734 | None:intergenic | 30.0% | |
| GTGTCAAAAATAGAAACTCT+GGG | + | chr1.1:23716866-23716885 | None:intergenic | 30.0% | |
| ! | AAGTGGTTAGTGTTGTTATT+AGG | + | chr1.1:23714624-23714643 | None:intergenic | 30.0% |
| ! | AGATTGCGTTTTCTACATTT+AGG | + | chr1.1:23714684-23714703 | None:intergenic | 30.0% |
| ! | GGTGAATATTTTGTACGAAT+AGG | - | chr1.1:23714985-23715004 | MS.gene29215:CDS | 30.0% |
| ! | TCCTGCTATTTATCAGTATA+TGG | - | chr1.1:23715017-23715036 | MS.gene29215:CDS | 30.0% |
| ! | TGGTTTCCAATGTTGATAAA+GGG | - | chr1.1:23716354-23716373 | MS.gene29215:CDS | 30.0% |
| ! | TTGGTTTCCAATGTTGATAA+AGG | - | chr1.1:23716353-23716372 | MS.gene29215:CDS | 30.0% |
| !!! | AACAGTTTTGTTTTCCATTG+AGG | + | chr1.1:23714760-23714779 | None:intergenic | 30.0% |
| !!! | ACAGTGTCGTTTTATTTTTC+AGG | - | chr1.1:23716926-23716945 | MS.gene29215:intron | 30.0% |
| !!! | ACTAATGGTTTTGTAGGATT+TGG | - | chr1.1:23717097-23717116 | MS.gene29215:intron | 30.0% |
| !!! | TTATGGTTTTGTTGTTTGAG+TGG | + | chr1.1:23714724-23714743 | None:intergenic | 30.0% |
| AATCGCTTAGAAATCATGGT+TGG | + | chr1.1:23715569-23715588 | None:intergenic | 35.0% | |
| ACAGAAAGTTCCAACATCAT+CGG | + | chr1.1:23716996-23717015 | None:intergenic | 35.0% | |
| AGAGATAAGACAGTATCCAA+AGG | + | chr1.1:23716546-23716565 | None:intergenic | 35.0% | |
| ATAGGGAATATTCAGCAAGA+AGG | - | chr1.1:23717052-23717071 | MS.gene29215:intron | 35.0% | |
| ATCGCTTAGAAATCATGGTT+GGG | + | chr1.1:23715568-23715587 | None:intergenic | 35.0% | |
| ATTAGGATTAGGAGTAGAAG+AGG | + | chr1.1:23714607-23714626 | None:intergenic | 35.0% | |
| CAGTATATGGTGATAGATTC+AGG | - | chr1.1:23715030-23715049 | MS.gene29215:CDS | 35.0% | |
| CAGTTAACTGATATAGGAAC+CGG | - | chr1.1:23716734-23716753 | MS.gene29215:intron | 35.0% | |
| CGTGTCAAAAATAGAAACTC+TGG | + | chr1.1:23716867-23716886 | None:intergenic | 35.0% | |
| CTACTTCTGCTTCGTTTATT+GGG | - | chr1.1:23715127-23715146 | MS.gene29215:CDS | 35.0% | |
| GAAGTAGCAGGGTTAAAAAT+AGG | + | chr1.1:23715114-23715133 | None:intergenic | 35.0% | |
| GACAATGTGCTTATAAGTGA+GGG | - | chr1.1:23715500-23715519 | MS.gene29215:intron | 35.0% | |
| GCACCAAACATAACCAAAAA+AGG | - | chr1.1:23715769-23715788 | MS.gene29215:intron | 35.0% | |
| GTTAAGAGTCCACATCAAAT+AGG | - | chr1.1:23715468-23715487 | MS.gene29215:intron | 35.0% | |
| GTTTCTATCGATGGAACTAA+TGG | - | chr1.1:23717082-23717101 | MS.gene29215:intron | 35.0% | |
| TACTTCTGCTTCGTTTATTG+GGG | - | chr1.1:23715128-23715147 | MS.gene29215:CDS | 35.0% | |
| TCACTTATAAGCACATTGTC+AGG | + | chr1.1:23715500-23715519 | None:intergenic | 35.0% | |
| TGACAATGTGCTTATAAGTG+AGG | - | chr1.1:23715499-23715518 | MS.gene29215:intron | 35.0% | |
| TGTTGAAAAGGAAATGGAAG+TGG | + | chr1.1:23714641-23714660 | None:intergenic | 35.0% | |
| TTAGGATTAGGAGTAGAAGA+GGG | + | chr1.1:23714606-23714625 | None:intergenic | 35.0% | |
| TTGCTGAATATTCCCTATGA+TGG | + | chr1.1:23717050-23717069 | None:intergenic | 35.0% | |
| TTTGGATCTGATGTAGTTTC+AGG | - | chr1.1:23714946-23714965 | MS.gene29215:CDS | 35.0% | |
| ! | AAGTGGTGTTGAAAAGGAAA+TGG | + | chr1.1:23714647-23714666 | None:intergenic | 35.0% |
| ! | ATCAAGTTGCATATGGTGAT+GGG | - | chr1.1:23715220-23715239 | MS.gene29215:intron | 35.0% |
| ! | CGTTTTCTACATTTAGGTGT+TGG | + | chr1.1:23714678-23714697 | None:intergenic | 35.0% |
| ! | GGAATTCAAGTTTCTATCGA+TGG | - | chr1.1:23717073-23717092 | MS.gene29215:intron | 35.0% |
| ! | TATCAAGTTGCATATGGTGA+TGG | - | chr1.1:23715219-23715238 | MS.gene29215:intron | 35.0% |
| ! | TGTGGATATCAAGTTGCATA+TGG | - | chr1.1:23715213-23715232 | MS.gene29215:intron | 35.0% |
| ! | TGTTTTGTGGGTGGTTTTTT+TGG | + | chr1.1:23714812-23714831 | None:intergenic | 35.0% |
| ! | TTTCCATTGAGGTTGTTGTT+GGG | + | chr1.1:23714749-23714768 | None:intergenic | 35.0% |
| ! | TTTTCCATTGAGGTTGTTGT+TGG | + | chr1.1:23714750-23714769 | None:intergenic | 35.0% |
| !! | GTTGTGTGTTTTTGTTGAGA+CGG | + | chr1.1:23714888-23714907 | None:intergenic | 35.0% |
| !! | TAGAATGGGTTATGAATGAG+AGG | + | chr1.1:23716638-23716657 | None:intergenic | 35.0% |
| !! | TGAGTTGAAACGTGTTTTGT+GGG | + | chr1.1:23714824-23714843 | None:intergenic | 35.0% |
| !! | TGTTTTTGTTGAGACGGTTA+AGG | + | chr1.1:23714882-23714901 | None:intergenic | 35.0% |
| !!! | GATGGAACTAATGGTTTTGT+AGG | - | chr1.1:23717091-23717110 | MS.gene29215:intron | 35.0% |
| !!! | GTGTCGTTTTATTTTTCAGG+TGG | - | chr1.1:23716929-23716948 | MS.gene29215:intron | 35.0% |
| !!! | TGCCCTTTTTTGGTTATGTT+TGG | + | chr1.1:23715775-23715794 | None:intergenic | 35.0% |
| AACAGTAGGTAACCTGGTAA+TGG | + | chr1.1:23716786-23716805 | None:intergenic | 40.0% | |
| AAGCGTCCCTTTATCAACAT+TGG | + | chr1.1:23716363-23716382 | None:intergenic | 40.0% | |
| AGGTCATCACCTATTTGATG+TGG | + | chr1.1:23715480-23715499 | None:intergenic | 40.0% | |
| AGTAGAAGCTAGGGTAGAAT+GGG | + | chr1.1:23716652-23716671 | None:intergenic | 40.0% | |
| ATAAACGAAGCAGAAGTAGC+AGG | + | chr1.1:23715126-23715145 | None:intergenic | 40.0% | |
| ATACCCAACAACAACCTCAA+TGG | - | chr1.1:23714743-23714762 | MS.gene29215:CDS | 40.0% | |
| CAAAAAATTCCTGGCTGGAA+AGG | + | chr1.1:23716966-23716985 | None:intergenic | 40.0% | |
| CTAACACAACCTCACAAAAC+CGG | + | chr1.1:23715544-23715563 | None:intergenic | 40.0% | |
| CTCTTGAAACCATAACCATC+GGG | - | chr1.1:23716384-23716403 | MS.gene29215:CDS | 40.0% | |
| CTTCACACAGTACATACCTT+TGG | + | chr1.1:23715253-23715272 | None:intergenic | 40.0% | |
| CTTCTACTACGTCTCACTTT+CGG | - | chr1.1:23716664-23716683 | MS.gene29215:intron | 40.0% | |
| GACACGTGTTATGACTTGAA+CGG | - | chr1.1:23716881-23716900 | MS.gene29215:intron | 40.0% | |
| GATTGCAGTGTCCTTGATAA+CGG | + | chr1.1:23716414-23716433 | None:intergenic | 40.0% | |
| GCTACTTCTGCTTCGTTTAT+TGG | - | chr1.1:23715126-23715145 | MS.gene29215:CDS | 40.0% | |
| GCTCTTGAAACCATAACCAT+CGG | - | chr1.1:23716383-23716402 | MS.gene29215:CDS | 40.0% | |
| GTTATCAAGGACACTGCAAT+CGG | - | chr1.1:23716413-23716432 | MS.gene29215:CDS | 40.0% | |
| TAAACGAAGCAGAAGTAGCA+GGG | + | chr1.1:23715125-23715144 | None:intergenic | 40.0% | |
| TAGTAGAAGCTAGGGTAGAA+TGG | + | chr1.1:23716653-23716672 | None:intergenic | 40.0% | |
| TTAACTGATATAGGAACCGG+AGG | - | chr1.1:23716737-23716756 | MS.gene29215:intron | 40.0% | |
| TTATCAAGGACACTGCAATC+GGG | - | chr1.1:23716414-23716433 | MS.gene29215:CDS | 40.0% | |
| TTCTACTACGTCTCACTTTC+GGG | - | chr1.1:23716665-23716684 | MS.gene29215:intron | 40.0% | |
| ! | GAGGTTGTTGTTGGGTATTA+TGG | + | chr1.1:23714741-23714760 | None:intergenic | 40.0% |
| ! | GGATGTTTGCTTTGGATACA+GGG | + | chr1.1:23714425-23714444 | None:intergenic | 40.0% |
| ! | GTGAGAAAGTGGTGTTGAAA+AGG | + | chr1.1:23714653-23714672 | None:intergenic | 40.0% |
| ! | TGGATGTTTGCTTTGGATAC+AGG | + | chr1.1:23714426-23714445 | None:intergenic | 40.0% |
| ! | TTTTGTTGAGACGGTTAAGG+AGG | + | chr1.1:23714879-23714898 | None:intergenic | 40.0% |
| !! | AAAGCATTGTAGGCAACAGT+AGG | + | chr1.1:23716800-23716819 | None:intergenic | 40.0% |
| !! | ACAGCAACAGAAGCTAGTTT+TGG | - | chr1.1:23714928-23714947 | MS.gene29215:CDS | 40.0% |
| !! | GTGAGTTGAAACGTGTTTTG+TGG | + | chr1.1:23714825-23714844 | None:intergenic | 40.0% |
| !! | TTGATGATGATGTTGCTTGC+CGG | - | chr1.1:23715181-23715200 | MS.gene29215:intron | 40.0% |
| !!! | AGCCAGGAATTTTTTGATCC+CGG | - | chr1.1:23716970-23716989 | MS.gene29215:intron | 40.0% |
| AAAGTTCCAACATCATCGGC+CGG | + | chr1.1:23716992-23717011 | None:intergenic | 45.0% | |
| AAATCTTGACCTTTCCAGCC+AGG | - | chr1.1:23716954-23716973 | MS.gene29215:intron | 45.0% | |
| AATTGGCCCACGAAAGACAT+AGG | + | chr1.1:23716503-23716522 | None:intergenic | 45.0% | |
| AGTGAGACGTAGTAGAAGCT+AGG | + | chr1.1:23716662-23716681 | None:intergenic | 45.0% | |
| ATGTCTTTCGTGGGCCAATT+GGG | - | chr1.1:23716503-23716522 | MS.gene29215:CDS | 45.0% | |
| GGATACTGTCTTATCTCTCG+AGG | - | chr1.1:23716548-23716567 | MS.gene29215:CDS | 45.0% | |
| GGGATCAAAAAATTCCTGGC+TGG | + | chr1.1:23716971-23716990 | None:intergenic | 45.0% | |
| GTGAGACGTAGTAGAAGCTA+GGG | + | chr1.1:23716661-23716680 | None:intergenic | 45.0% | |
| TATGTCTTTCGTGGGCCAAT+TGG | - | chr1.1:23716502-23716521 | MS.gene29215:CDS | 45.0% | |
| TCATCCGGTTCACTCGAATT+CGG | - | chr1.1:23716578-23716597 | MS.gene29215:intron | 45.0% | |
| TCTCTTACTGAGTGTGTTGG+TGG | + | chr1.1:23714560-23714579 | None:intergenic | 45.0% | |
| TGCTCTCTTACTGAGTGTGT+TGG | + | chr1.1:23714563-23714582 | None:intergenic | 45.0% | |
| TGGAACGAGGGAATGTTTGT+TGG | - | chr1.1:23716446-23716465 | MS.gene29215:CDS | 45.0% | |
| TTCTGCTTCGTTTATTGGGG+TGG | - | chr1.1:23715131-23715150 | MS.gene29215:CDS | 45.0% | |
| TTGAAACCATAACCATCGGG+CGG | - | chr1.1:23716387-23716406 | MS.gene29215:CDS | 45.0% | |
| TTGGTGAAGGGATTTGAGTG+AGG | + | chr1.1:23714537-23714556 | None:intergenic | 45.0% | |
| ! | ATGATGTTGCTTGCCGGAAA+GGG | - | chr1.1:23715187-23715206 | MS.gene29215:intron | 45.0% |
| ! | CCTATGATGGAAAGACCAGA+GGG | + | chr1.1:23717037-23717056 | None:intergenic | 45.0% |
| ! | CCTCTGGTCTTTCCATCATA+GGG | - | chr1.1:23717035-23717054 | MS.gene29215:intron | 45.0% |
| ! | GAATGTTTGTTGGAGCAGCT+GGG | - | chr1.1:23716456-23716475 | MS.gene29215:CDS | 45.0% |
| ! | GTTGAAACGTGTTTTGTGGG+TGG | + | chr1.1:23714821-23714840 | None:intergenic | 45.0% |
| ! | TTGCTTTGGATACAGGGATG+TGG | + | chr1.1:23714419-23714438 | None:intergenic | 45.0% |
| !! | AGGTGTTGGAAGTGAGAAAG+TGG | + | chr1.1:23714664-23714683 | None:intergenic | 45.0% |
| !! | CGGTTTTGTGAGGTTGTGTT+AGG | - | chr1.1:23715542-23715561 | MS.gene29215:intron | 45.0% |
| !! | GTAGTTTCAGGCACTGAAGA+AGG | - | chr1.1:23714958-23714977 | MS.gene29215:CDS | 45.0% |
| !! | TGCATCGCGAAAAGCATTGT+AGG | + | chr1.1:23716810-23716829 | None:intergenic | 45.0% |
| !! | TTACTGAGTGTGTTGGTGGT+TGG | + | chr1.1:23714556-23714575 | None:intergenic | 45.0% |
| AAGTTCCAACATCATCGGCC+GGG | + | chr1.1:23716991-23717010 | None:intergenic | 50.0% | |
| AATGCCCGTAGGTGCAATGT+GGG | - | chr1.1:23716610-23716629 | MS.gene29215:intron | 50.0% | |
| AGGAACCCACATTGCACCTA+CGG | + | chr1.1:23716618-23716637 | None:intergenic | 50.0% | |
| AGGGATTTGAGTGAGGACTG+AGG | + | chr1.1:23714530-23714549 | None:intergenic | 50.0% | |
| AGGTGGACCTATGTCTTTCG+TGG | - | chr1.1:23716493-23716512 | MS.gene29215:CDS | 50.0% | |
| ATGGAAAGACCAGAGGGTGA+AGG | + | chr1.1:23717031-23717050 | None:intergenic | 50.0% | |
| CGACACTGTTGGAACTCGAA+CGG | + | chr1.1:23716915-23716934 | None:intergenic | 50.0% | |
| GAGTGAGGACTGAGGAATGA+TGG | + | chr1.1:23714522-23714541 | None:intergenic | 50.0% | |
| GATATCCACACCTCCCTTTC+CGG | + | chr1.1:23715203-23715222 | None:intergenic | 50.0% | |
| GGCCGGGATCAAAAAATTCC+TGG | + | chr1.1:23716975-23716994 | None:intergenic | 50.0% | |
| GGTGGACCTATGTCTTTCGT+GGG | - | chr1.1:23716494-23716513 | MS.gene29215:CDS | 50.0% | |
| GTAGGCAACAGTAGGTAACC+TGG | + | chr1.1:23716792-23716811 | None:intergenic | 50.0% | |
| TGTCTTATCTCTCGAGGCAC+TGG | - | chr1.1:23716554-23716573 | MS.gene29215:CDS | 50.0% | |
| ! | ATAGAAACTCTGGGAGCACG+TGG | + | chr1.1:23716857-23716876 | None:intergenic | 50.0% |
| ! | CCCTATGATGGAAAGACCAG+AGG | + | chr1.1:23717038-23717057 | None:intergenic | 50.0% |
| ! | CCCTCTGGTCTTTCCATCAT+AGG | - | chr1.1:23717034-23717053 | MS.gene29215:intron | 50.0% |
| ! | GATGATGTTGCTTGCCGGAA+AGG | - | chr1.1:23715186-23715205 | MS.gene29215:intron | 50.0% |
| ! | GGAATGTTTGTTGGAGCAGC+TGG | - | chr1.1:23716455-23716474 | MS.gene29215:CDS | 50.0% |
| ! | TCACTTTCGGGTCTTGCAGT+TGG | - | chr1.1:23716677-23716696 | MS.gene29215:intron | 50.0% |
| !! | AGTGTGTTGGTGGTTGGTGA+AGG | + | chr1.1:23714550-23714569 | None:intergenic | 50.0% |
| !! | GTGTGTTGGTGGTTGGTGAA+GGG | + | chr1.1:23714549-23714568 | None:intergenic | 50.0% |
| !! | TAACCTGGTAATGGCTGTGC+CGG | + | chr1.1:23716777-23716796 | None:intergenic | 50.0% |
| !! | TCAGGCACTGAAGAAGGAAG+TGG | - | chr1.1:23714964-23714983 | MS.gene29215:CDS | 50.0% |
| AAGACATAGGTCCACCTCCG+AGG | + | chr1.1:23716490-23716509 | None:intergenic | 55.0% | |
| AAGGACACTGCAATCGGGTG+CGG | - | chr1.1:23716419-23716438 | MS.gene29215:CDS | 55.0% | |
| ACAGTATCCAAAGGCTCCGC+CGG | + | chr1.1:23716537-23716556 | None:intergenic | 55.0% | |
| AGGAACCGGAGGAGTTGTCA+TGG | - | chr1.1:23716748-23716767 | MS.gene29215:intron | 55.0% | |
| CAATGCCCGTAGGTGCAATG+TGG | - | chr1.1:23716609-23716628 | MS.gene29215:intron | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | - | chr1.1:23715522-23715541 | MS.gene29215:intron | 55.0% | |
| GCATTTGCTCCTTCACCCTC+TGG | - | chr1.1:23717019-23717038 | MS.gene29215:intron | 55.0% | |
| GCGTCCGAATTCGAGTGAAC+CGG | + | chr1.1:23716585-23716604 | None:intergenic | 55.0% | |
| GGAACCCACATTGCACCTAC+GGG | + | chr1.1:23716617-23716636 | None:intergenic | 55.0% | |
| GGAGGAGTTGTCATGGACAC+CGG | - | chr1.1:23716755-23716774 | MS.gene29215:intron | 55.0% | |
| GGTGTCCATGACAACTCCTC+CGG | + | chr1.1:23716756-23716775 | None:intergenic | 55.0% | |
| GTTGGAGCAGCTGGGTTGTT+AGG | - | chr1.1:23716464-23716483 | MS.gene29215:CDS | 55.0% | |
| TTGATCCCGGCCGATGATGT+TGG | - | chr1.1:23716983-23717002 | MS.gene29215:intron | 55.0% | |
| ! | ATGTTGCTTGCCGGAAAGGG+AGG | - | chr1.1:23715190-23715209 | MS.gene29215:intron | 55.0% |
| ! | CTTTCGGGTCTTGCAGTTGG+AGG | - | chr1.1:23716680-23716699 | MS.gene29215:intron | 55.0% |
| ! | TTGCACCTACGGGCATTGCT+TGG | + | chr1.1:23716607-23716626 | None:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | + | chr1.1:23715530-23715549 | None:intergenic | 55.0% |
| !! | CCTCACAAAACCGGCTTGTG+AGG | + | chr1.1:23715535-23715554 | None:intergenic | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+AGG | - | chr1.1:23715532-23715551 | MS.gene29215:intron | 55.0% |
| !! | GGTGATGGGTCGTCTACCAA+AGG | - | chr1.1:23715234-23715253 | MS.gene29215:intron | 55.0% |
| !! | TCTCGAGGCACTGGATCATC+CGG | - | chr1.1:23716563-23716582 | MS.gene29215:intron | 55.0% |
| AACGGTCCGCCCGATGGTTA+TGG | + | chr1.1:23716396-23716415 | None:intergenic | 60.0% | |
| ACACCGGCACAGCCATTACC+AGG | - | chr1.1:23716771-23716790 | MS.gene29215:intron | 60.0% | |
| CAATTGGGAGCCCAAACCGG+CGG | - | chr1.1:23716518-23716537 | MS.gene29215:CDS | 60.0% | |
| CATCGGGCGGACCGTTATCA+AGG | - | chr1.1:23716400-23716419 | MS.gene29215:CDS | 60.0% | |
| CTGCAATCGGGTGCGGACAT+TGG | - | chr1.1:23716426-23716445 | MS.gene29215:CDS | 60.0% | |
| GCAGCTGGGTTGTTAGGCCT+CGG | - | chr1.1:23716470-23716489 | MS.gene29215:CDS | 60.0% | |
| GGCCAATTGGGAGCCCAAAC+CGG | - | chr1.1:23716515-23716534 | MS.gene29215:CDS | 60.0% | |
| GGGTGCGGACATTGGAACGA+GGG | - | chr1.1:23716434-23716453 | MS.gene29215:CDS | 60.0% | |
| ! | ATCCAAAGGCTCCGCCGGTT+TGG | + | chr1.1:23716532-23716551 | None:intergenic | 60.0% |
| !! | CTTGATAACGGTCCGCCCGA+TGG | + | chr1.1:23716402-23716421 | None:intergenic | 60.0% |
| !! | TCCAAAGGCTCCGCCGGTTT+GGG | + | chr1.1:23716531-23716550 | None:intergenic | 60.0% |
| CGGGTGCGGACATTGGAACG+AGG | - | chr1.1:23716433-23716452 | MS.gene29215:CDS | 65.0% | |
| GCTGGGTTGTTAGGCCTCGG+AGG | - | chr1.1:23716473-23716492 | MS.gene29215:CDS | 65.0% | |
| GCTTGCCGGAAAGGGAGGTG+TGG | - | chr1.1:23715195-23715214 | MS.gene29215:intron | 65.0% | |
| GGACGCCAAGCAATGCCCGT+AGG | - | chr1.1:23716599-23716618 | MS.gene29215:intron | 65.0% | |
| GGGTTGTTAGGCCTCGGAGG+TGG | - | chr1.1:23716476-23716495 | MS.gene29215:CDS | 65.0% | |
| !! | CGCCGGTTTGGGCTCCCAAT+TGG | + | chr1.1:23716520-23716539 | None:intergenic | 65.0% |
| GCCCAAACCGGCGGAGCCTT+TGG | - | chr1.1:23716527-23716546 | MS.gene29215:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 23714404 | 23717135 | 23714404 | ID=MS.gene29215 |
| chr1.1 | mRNA | 23714404 | 23717135 | 23714404 | ID=MS.gene29215.t1;Parent=MS.gene29215 |
| chr1.1 | exon | 23717114 | 23717135 | 23717114 | ID=MS.gene29215.t1.exon1;Parent=MS.gene29215.t1 |
| chr1.1 | CDS | 23717114 | 23717135 | 23717114 | ID=cds.MS.gene29215.t1;Parent=MS.gene29215.t1 |
| chr1.1 | exon | 23716284 | 23716577 | 23716284 | ID=MS.gene29215.t1.exon2;Parent=MS.gene29215.t1 |
| chr1.1 | CDS | 23716284 | 23716577 | 23716284 | ID=cds.MS.gene29215.t1;Parent=MS.gene29215.t1 |
| chr1.1 | exon | 23714404 | 23715164 | 23714404 | ID=MS.gene29215.t1.exon3;Parent=MS.gene29215.t1 |
| chr1.1 | CDS | 23714404 | 23715164 | 23714404 | ID=cds.MS.gene29215.t1;Parent=MS.gene29215.t1 |
| Gene Sequence |
| Protein sequence |
