Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32211.t1 | XP_003608247.1 | 98.6 | 578 | 7 | 1 | 1 | 577 | 1 | 578 | 0.00E+00 | 1152.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32211.t1 | Q94BV7 | 74.6 | 586 | 136 | 5 | 1 | 577 | 1 | 582 | 4.7e-257 | 888.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32211.t1 | Q2HTY1 | 98.6 | 578 | 7 | 1 | 1 | 577 | 1 | 578 | 0.0e+00 | 1152.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052562 | MS.gene32211 | 0.962881 | 2.08E-121 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene01745 | MS.gene32211 | PPI |
| MS.gene32211 | MS.gene01745 | PPI |
| MS.gene01336 | MS.gene32211 | PPI |
| MS.gene32211 | MS.gene009833 | PPI |
| MS.gene32211 | MS.gene57021 | PPI |
| MS.gene02306 | MS.gene32211 | PPI |
| MS.gene32211 | MS.gene064199 | PPI |
| MS.gene32211 | MS.gene069940 | PPI |
| MS.gene32211 | MS.gene052562 | PPI |
| MS.gene32211 | MS.gene53986 | PPI |
| MS.gene32211 | MS.gene066720 | PPI |
| MS.gene32211 | MS.gene91142 | PPI |
| MS.gene32211 | MS.gene048480 | PPI |
| MS.gene32211 | MS.gene88624 | PPI |
| MS.gene32211 | MS.gene002362 | PPI |
| MS.gene32211 | MS.gene03971 | PPI |
| MS.gene50180 | MS.gene32211 | PPI |
| MS.gene32211 | MS.gene33297 | PPI |
| MS.gene32211 | MS.gene048610 | PPI |
| MS.gene32211 | MS.gene046054 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32211.t1 | MTR_4g091240 | 98.616 | 578 | 7 | 1 | 1 | 577 | 1 | 578 | 0.0 | 1186 |
| MS.gene32211.t1 | MTR_2g011730 | 84.256 | 578 | 90 | 1 | 1 | 577 | 1 | 578 | 0.0 | 1020 |
| MS.gene32211.t1 | MTR_4g091240 | 98.701 | 462 | 6 | 0 | 116 | 577 | 13 | 474 | 0.0 | 954 |
| MS.gene32211.t1 | MTR_4g045993 | 68.706 | 572 | 171 | 4 | 6 | 577 | 6 | 569 | 0.0 | 820 |
| MS.gene32211.t1 | MTR_4g045997 | 61.765 | 578 | 209 | 5 | 6 | 577 | 6 | 577 | 0.0 | 754 |
| MS.gene32211.t1 | MTR_4g045997 | 61.162 | 551 | 202 | 5 | 6 | 550 | 6 | 550 | 0.0 | 708 |
| MS.gene32211.t1 | MTR_4g090580 | 38.889 | 360 | 199 | 9 | 50 | 403 | 105 | 449 | 2.66e-71 | 239 |
| MS.gene32211.t1 | MTR_4g090580 | 34.167 | 120 | 70 | 3 | 463 | 577 | 428 | 543 | 3.66e-12 | 69.3 |
| MS.gene32211.t1 | MTR_5g071250 | 41.486 | 323 | 176 | 7 | 50 | 369 | 63 | 375 | 1.08e-63 | 215 |
| MS.gene32211.t1 | MTR_5g071250 | 41.486 | 323 | 176 | 7 | 50 | 369 | 63 | 375 | 4.09e-63 | 216 |
| MS.gene32211.t1 | MTR_5g071250 | 35.833 | 120 | 68 | 2 | 463 | 577 | 386 | 501 | 1.86e-12 | 70.1 |
| MS.gene32211.t1 | MTR_3g464380 | 39.938 | 323 | 181 | 7 | 50 | 369 | 66 | 378 | 6.91e-63 | 215 |
| MS.gene32211.t1 | MTR_3g464380 | 35.537 | 121 | 67 | 4 | 463 | 577 | 389 | 504 | 7.81e-11 | 65.1 |
| MS.gene32211.t1 | MTR_0931s0010 | 27.358 | 318 | 205 | 10 | 76 | 389 | 260 | 555 | 4.47e-24 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32211.t1 | AT4G05020 | 74.573 | 586 | 136 | 5 | 1 | 577 | 1 | 582 | 0.0 | 895 |
| MS.gene32211.t1 | AT4G21490 | 73.242 | 583 | 147 | 4 | 1 | 577 | 1 | 580 | 0.0 | 878 |
| MS.gene32211.t1 | AT4G05020 | 70.144 | 623 | 136 | 6 | 1 | 577 | 1 | 619 | 0.0 | 876 |
| MS.gene32211.t1 | AT4G21490 | 73.242 | 583 | 146 | 5 | 1 | 577 | 1 | 579 | 0.0 | 873 |
| MS.gene32211.t1 | AT2G20800 | 66.044 | 589 | 181 | 5 | 1 | 577 | 1 | 582 | 0.0 | 784 |
| MS.gene32211.t1 | AT4G28220 | 66.794 | 524 | 170 | 2 | 54 | 577 | 52 | 571 | 0.0 | 753 |
| MS.gene32211.t1 | AT4G28220 | 64.114 | 457 | 160 | 2 | 54 | 510 | 52 | 504 | 0.0 | 626 |
| MS.gene32211.t1 | AT2G29990 | 39.815 | 324 | 180 | 8 | 50 | 369 | 70 | 382 | 3.69e-61 | 211 |
| MS.gene32211.t1 | AT2G29990 | 35.000 | 120 | 69 | 3 | 463 | 577 | 393 | 508 | 2.74e-11 | 66.6 |
| MS.gene32211.t1 | AT1G07180 | 40.000 | 325 | 178 | 8 | 50 | 369 | 72 | 384 | 6.26e-61 | 210 |
| MS.gene32211.t1 | AT1G07180 | 38.333 | 120 | 65 | 3 | 463 | 577 | 395 | 510 | 5.25e-14 | 75.1 |
Find 121 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGGTCCTATTAGATTT+AGG | 0.142882 | 4.4:-22660625 | MS.gene32211:CDS |
| GGAGAATTGCCATTTCTTAA+AGG | 0.238763 | 4.4:-22662508 | MS.gene32211:intron |
| TGGATGAGACGCTTTATATT+TGG | 0.251464 | 4.4:-22659975 | MS.gene32211:CDS |
| TTCCATCCGGTTAAAACATT+TGG | 0.311503 | 4.4:+22660664 | None:intergenic |
| TAGAGAAACGTTGGAAGAAT+TGG | 0.312213 | 4.4:+22663977 | None:intergenic |
| ACTTACACTCAAAGAATTTC+AGG | 0.318131 | 4.4:-22661016 | MS.gene32211:CDS |
| AGAAGGTCCTATTAGATTTA+GGG | 0.323652 | 4.4:-22660624 | MS.gene32211:CDS |
| ATGCAGTGGCGGTGGTCTTT+TGG | 0.324109 | 4.4:-22663672 | MS.gene32211:intron |
| CCTTCTCCCCTAAATCTAAT+AGG | 0.330735 | 4.4:+22660617 | None:intergenic |
| CTAAATCTAATAGGACCTTC+TGG | 0.336066 | 4.4:+22660626 | None:intergenic |
| TTTAGGTCAATTTGCTCCTC+TGG | 0.342609 | 4.4:-22660268 | MS.gene32211:CDS |
| TCCTCAAGGTACAAGCATTT+AGG | 0.348514 | 4.4:-22660285 | MS.gene32211:intron |
| AAAAGTTTACCTTTAAGAAA+TGG | 0.366458 | 4.4:+22662499 | None:intergenic |
| ATCGGTGCCGGAAAAGAAAA+AGG | 0.369089 | 4.4:-22663621 | MS.gene32211:CDS |
| TCCATGGTTGTGAAAGTATC+TGG | 0.369865 | 4.4:-22661781 | MS.gene32211:CDS |
| CCTGGAGATTGGGTTTCAAT+TGG | 0.380512 | 4.4:-22660219 | MS.gene32211:CDS |
| CTGGCGCACAAGGGCGTTAG+TGG | 0.385603 | 4.4:-22660006 | MS.gene32211:CDS |
| GTCATCGGTTCAAGCCCTTC+AGG | 0.387915 | 4.4:-22660592 | MS.gene32211:intron |
| GATGGTATTGATGTGAAAAC+AGG | 0.394769 | 4.4:-22661805 | MS.gene32211:CDS |
| CTGCACAGCTACCTGGAGAT+TGG | 0.399659 | 4.4:-22660230 | MS.gene32211:CDS |
| TGCACAGCTACCTGGAGATT+GGG | 0.402557 | 4.4:-22660229 | MS.gene32211:CDS |
| AGCAAGTCAGCTGGCGCACA+AGG | 0.404231 | 4.4:-22660016 | MS.gene32211:CDS |
| TGACCTTCCTGAAGATATTA+CGG | 0.408050 | 4.4:+22663432 | None:intergenic |
| GTTAGTGCTGGGAACTGGTT+GGG | 0.424018 | 4.4:-22663597 | MS.gene32211:CDS |
| TTCCATATGGAATGGCTGTC+TGG | 0.426693 | 4.4:-22661708 | MS.gene32211:CDS |
| ATTGTTGGAGGTGGTCCAAC+TGG | 0.442199 | 4.4:-22662186 | MS.gene32211:CDS |
| GGAATGGCTGTCTGGTCAAC+TGG | 0.449853 | 4.4:-22661700 | MS.gene32211:CDS |
| CAATTGGACACAGCAGTCAA+TGG | 0.450596 | 4.4:-22660203 | MS.gene32211:CDS |
| TTTAGTTAAAATCACGCTCC+TGG | 0.452080 | 4.4:-22662091 | MS.gene32211:CDS |
| GCTGTCTGGTCAACTGGTAT+TGG | 0.452937 | 4.4:-22661694 | MS.gene32211:CDS |
| TTAGGTCAATTTGCTCCTCT+GGG | 0.455111 | 4.4:-22660267 | MS.gene32211:CDS |
| ATTTCTTCCTGCTACAGCTC+AGG | 0.463798 | 4.4:-22660815 | MS.gene32211:intron |
| AACCCGTCCGTAATATCTTC+AGG | 0.464325 | 4.4:-22663439 | MS.gene32211:CDS |
| GAAATTACTACAATTCCATA+TGG | 0.465806 | 4.4:-22661721 | MS.gene32211:CDS |
| CAGACAGCTGCACAGCTACC+TGG | 0.466175 | 4.4:-22660237 | MS.gene32211:CDS |
| AAAATCACGCTCCTGGAGGC+TGG | 0.469714 | 4.4:-22662084 | MS.gene32211:CDS |
| GTCAACACATTTAATACTCC+TGG | 0.471749 | 4.4:-22662537 | MS.gene32211:CDS |
| TCTCAATGATCCGCGATATG+AGG | 0.475412 | 4.4:-22663552 | MS.gene32211:CDS |
| TGAACAGCAAGCAAGTCAGC+TGG | 0.476723 | 4.4:-22660025 | MS.gene32211:intron |
| GACCAGACAGCCATTCCATA+TGG | 0.477712 | 4.4:+22661706 | None:intergenic |
| GGGCGTTAGTGGTGTCAGAC+TGG | 0.480699 | 4.4:-22659995 | MS.gene32211:CDS |
| ATTTGGTCAAATTATACCCT+GGG | 0.483128 | 4.4:-22662122 | MS.gene32211:CDS |
| TCCGGTTAAAACATTTGGCC+AGG | 0.485943 | 4.4:+22660669 | None:intergenic |
| GGCTGTTGCTACATCTGAAT+CGG | 0.493043 | 4.4:-22663639 | MS.gene32211:CDS |
| TGCTACATCTGAATCGGTGC+CGG | 0.503421 | 4.4:-22663633 | MS.gene32211:CDS |
| CCTATTAGATTTAGGGGAGA+AGG | 0.510034 | 4.4:-22660617 | MS.gene32211:CDS |
| AGATATGACCTCCAGCCTCC+AGG | 0.510188 | 4.4:+22662073 | None:intergenic |
| GATGAATGGTTGAGAGTTGA+GGG | 0.510295 | 4.4:-22661489 | MS.gene32211:CDS |
| GTGCTGGGAACTGGTTGGGC+AGG | 0.512186 | 4.4:-22663593 | MS.gene32211:CDS |
| GCCAGATACTTTCACAACCA+TGG | 0.514707 | 4.4:+22661780 | None:intergenic |
| ACATGCACCTGAGCTGTAGC+AGG | 0.524127 | 4.4:+22660808 | None:intergenic |
| TTCTCCTCTGCACCACCGTA+AGG | 0.527460 | 4.4:-22663918 | MS.gene32211:intron |
| ACCAAGTGCATACACATTGT+CGG | 0.529575 | 4.4:+22661464 | None:intergenic |
| CACAATGCTGCGAGCCTCAA+CGG | 0.529988 | 4.4:+22663463 | None:intergenic |
| ATCTCAGCAAGGCACCTACC+TGG | 0.530971 | 4.4:-22660687 | MS.gene32211:CDS |
| CAACCATTCATCAGTAGCTA+TGG | 0.531358 | 4.4:+22661500 | None:intergenic |
| GACACAGCAGTCAATGGTTG+TGG | 0.536831 | 4.4:-22660197 | MS.gene32211:CDS |
| GCTGCAAACTCCACTCCAGT+TGG | 0.542620 | 4.4:+22662171 | None:intergenic |
| TACTACAATTCCATATGGAA+TGG | 0.546074 | 4.4:-22661716 | MS.gene32211:CDS |
| GAAGACAAGTTCAAAAGAGA+TGG | 0.546988 | 4.4:-22661823 | MS.gene32211:CDS |
| TTAGGGGAGAAGGGCGTCAT+CGG | 0.550655 | 4.4:-22660607 | MS.gene32211:CDS |
| TGATCTGCTGAAGGAATCCA+AGG | 0.552762 | 4.4:-22660917 | MS.gene32211:CDS |
| CTCTCTTCATCACTCACACT+AGG | 0.557534 | 4.4:+22662231 | None:intergenic |
| ATTTAATACTCCTGGTGTCA+CGG | 0.557915 | 4.4:-22662529 | MS.gene32211:CDS |
| TGTTAGTGCTGGGAACTGGT+TGG | 0.558983 | 4.4:-22663598 | MS.gene32211:CDS |
| GAAGGTCCTATTAGATTTAG+GGG | 0.561054 | 4.4:-22660623 | MS.gene32211:CDS |
| AAGGTGTTAGTGCTGGGAAC+TGG | 0.561409 | 4.4:-22663602 | MS.gene32211:CDS |
| CCAATTGAAACCCAATCTCC+AGG | 0.561657 | 4.4:+22660219 | None:intergenic |
| TGGCAATTCTCCGTGACACC+AGG | 0.563016 | 4.4:+22662519 | None:intergenic |
| CAAGTAACACTAGGCAGCAG+AGG | 0.567935 | 4.4:+22663491 | None:intergenic |
| GGGCAGGAACAAGTTTCTTG+AGG | 0.568076 | 4.4:-22663577 | MS.gene32211:CDS |
| TTTCATCTCGGAGTCCACAT+TGG | 0.569558 | 4.4:+22660837 | None:intergenic |
| TTTGGTTGATGCAGTGGCGG+TGG | 0.573376 | 4.4:-22663680 | MS.gene32211:intron |
| CTATTAGATTTAGGGGAGAA+GGG | 0.575641 | 4.4:-22660616 | MS.gene32211:CDS |
| TGATGAATGGTTGAGAGTTG+AGG | 0.576334 | 4.4:-22661490 | MS.gene32211:CDS |
| TGAGACGCTTTATATTTGGA+AGG | 0.578429 | 4.4:-22659971 | MS.gene32211:CDS |
| GTTAAAACATTTGGCCAGGT+AGG | 0.579618 | 4.4:+22660673 | None:intergenic |
| GAGACGCTTTATATTTGGAA+GGG | 0.580595 | 4.4:-22659970 | MS.gene32211:CDS |
| CGTTGAGGCTCGCAGCATTG+TGG | 0.589439 | 4.4:-22663462 | MS.gene32211:CDS |
| CATCTGTGAAAGGTACCCTC+AGG | 0.589511 | 4.4:-22660980 | MS.gene32211:CDS |
| GATTTGGTCAAATTATACCC+TGG | 0.591979 | 4.4:-22662123 | MS.gene32211:CDS |
| TGGAGGTGGTCCAACTGGAG+TGG | 0.598114 | 4.4:-22662181 | MS.gene32211:CDS |
| AATAAACCAGCGAAAAGTCA+TGG | 0.602197 | 4.4:-22661430 | MS.gene32211:intron |
| TGATGTGAAAACAGGATCCA+TGG | 0.603473 | 4.4:-22661797 | MS.gene32211:CDS |
| CTAAAGAATAAACAGATGCA+TGG | 0.603919 | 4.4:-22660946 | MS.gene32211:CDS |
| CTTCCTGAAGATATTACGGA+CGG | 0.605747 | 4.4:+22663436 | None:intergenic |
| GCTGTCTGCTCGCCTCCCAG+AGG | 0.606207 | 4.4:+22660252 | None:intergenic |
| TGGCATTGCTGATCTGCTGA+AGG | 0.609063 | 4.4:-22660926 | MS.gene32211:CDS |
| ACCGACAATGTGTATGCACT+TGG | 0.609604 | 4.4:-22661465 | MS.gene32211:CDS |
| GGGACTCGAGTCAAATCTGA+AGG | 0.611059 | 4.4:-22659950 | None:intergenic |
| CTGTGAAAGGTACCCTCAGG+TGG | 0.613916 | 4.4:-22660977 | MS.gene32211:CDS |
| AAGACTGATGCAGACAACTC+AGG | 0.615045 | 4.4:-22661042 | MS.gene32211:CDS |
| TGTGGTATTCTGTCTATGCA+AGG | 0.616119 | 4.4:-22660179 | MS.gene32211:intron |
| TGTTACTTGCGGTACCGTTG+AGG | 0.617158 | 4.4:-22663477 | MS.gene32211:CDS |
| TTCCTGAAGATATTACGGAC+GGG | 0.617206 | 4.4:+22663437 | None:intergenic |
| GTGAAAGTAAAATAATTGCG+AGG | 0.621038 | 4.4:+22663515 | None:intergenic |
| GATATCTTCTTACCTTACGG+TGG | 0.624769 | 4.4:+22663906 | None:intergenic |
| CTTACCTTACGGTGGTGCAG+AGG | 0.628766 | 4.4:+22663914 | None:intergenic |
| GTGCCATAGCTACTGATGAA+TGG | 0.630752 | 4.4:-22661503 | MS.gene32211:CDS |
| AGCAGGAAGAAATTTCATCT+CGG | 0.631522 | 4.4:+22660825 | None:intergenic |
| CGTCCGTAATATCTTCAGGA+AGG | 0.637693 | 4.4:-22663435 | MS.gene32211:intron |
| TAATGAATGACATCTGTGAA+AGG | 0.638141 | 4.4:-22660990 | MS.gene32211:CDS |
| ACATGATCAAGTTACCTGAA+GGG | 0.639498 | 4.4:+22660578 | None:intergenic |
| TTAGATATAGCTCCACCTGA+GGG | 0.642435 | 4.4:+22660965 | None:intergenic |
| AGTTAAAATCACGCTCCTGG+AGG | 0.643487 | 4.4:-22662088 | MS.gene32211:CDS |
| GACTACTTAATCATAGCTGT+AGG | 0.644316 | 4.4:-22662567 | MS.gene32211:CDS |
| GGTCAATTTGCTCCTCTGGG+AGG | 0.646230 | 4.4:-22660264 | MS.gene32211:CDS |
| ACGGTACCGCAAGTAACACT+AGG | 0.649646 | 4.4:+22663482 | None:intergenic |
| TCCATTCGAACAGAAACATG+TGG | 0.650878 | 4.4:-22662706 | MS.gene32211:intron |
| CTGAGAGTCATAGTCACGGA+AGG | 0.651369 | 4.4:+22663951 | None:intergenic |
| TTTAGATATAGCTCCACCTG+AGG | 0.651676 | 4.4:+22660964 | None:intergenic |
| ATCACGCTCCTGGAGGCTGG+AGG | 0.653143 | 4.4:-22662081 | MS.gene32211:CDS |
| TATCAGGTTGCATCTCAGCA+AGG | 0.653961 | 4.4:-22660698 | MS.gene32211:intron |
| TACACTCAAAGAATTTCAGG+AGG | 0.672157 | 4.4:-22661013 | MS.gene32211:CDS |
| GCAAGTCAGCTGGCGCACAA+GGG | 0.679550 | 4.4:-22660015 | MS.gene32211:CDS |
| CTGCTGCCTAGTGTTACTTG+CGG | 0.683107 | 4.4:-22663488 | MS.gene32211:CDS |
| ACTGACAAAATCATGAAGTG+CGG | 0.684789 | 4.4:+22662149 | None:intergenic |
| TGAACTGAGAGTCATAGTCA+CGG | 0.696357 | 4.4:+22663947 | None:intergenic |
| ACGACGTGAACCTCATATCG+CGG | 0.706010 | 4.4:+22663542 | None:intergenic |
| GATCTGCTGAAGGAATCCAA+GGG | 0.715092 | 4.4:-22660916 | MS.gene32211:CDS |
| TTTGGTCAAATTATACCCTG+GGG | 0.717356 | 4.4:-22662121 | MS.gene32211:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATGAATTTTTTTTATTTTA+TGG | - | chr4.4:22660918-22660937 | MS.gene32211:CDS | 10.0% |
| !! | ATATAAGACAAACATTAATT+TGG | + | chr4.4:22660879-22660898 | None:intergenic | 15.0% |
| !! | ATCATTTATTTAATTAACAC+AGG | - | chr4.4:22662560-22662579 | MS.gene32211:CDS | 15.0% |
| !! | ATTTATTATTTACTTGACAT+TGG | - | chr4.4:22662392-22662411 | MS.gene32211:intron | 15.0% |
| !! | CTAATTAAGTAGAATTTAAT+CGG | + | chr4.4:22660143-22660162 | None:intergenic | 15.0% |
| !! | TGTGTTAATTAAATAAATGA+TGG | + | chr4.4:22662561-22662580 | None:intergenic | 15.0% |
| !! | TTTATGAATTAATTATGGTT+TGG | - | chr4.4:22660243-22660262 | MS.gene32211:CDS | 15.0% |
| !!! | TCATATTTTTGTTCATTTAT+TGG | - | chr4.4:22661068-22661087 | MS.gene32211:CDS | 15.0% |
| !!! | TGTAAATTAAACTTATCTTT+TGG | - | chr4.4:22660980-22660999 | MS.gene32211:CDS | 15.0% |
| !! | AAAAAAAATTCATGTACATG+TGG | + | chr4.4:22660912-22660931 | None:intergenic | 20.0% |
| !! | AAAAAAATTCATGTACATGT+GGG | + | chr4.4:22660911-22660930 | None:intergenic | 20.0% |
| !! | AAAGAGAATGATAAAAGTAA+AGG | + | chr4.4:22663559-22663578 | None:intergenic | 20.0% |
| !! | AACTAAAAACCAAAAAAACA+TGG | + | chr4.4:22661597-22661616 | None:intergenic | 20.0% |
| !! | CTGATTGTTAAATTGAATTT+CGG | - | chr4.4:22662844-22662863 | MS.gene32211:intron | 20.0% |
| !! | TAATAGATCTACGAAAATTT+CGG | - | chr4.4:22660182-22660201 | MS.gene32211:CDS | 20.0% |
| !!! | AAAAGTTTACCTTTAAGAAA+TGG | + | chr4.4:22661445-22661464 | None:intergenic | 20.0% |
| !!! | AAAGATTTTATGACACAAAT+TGG | - | chr4.4:22662286-22662305 | MS.gene32211:CDS | 20.0% |
| !!! | AACATTTGAAATTCAAAGAA+CGG | + | chr4.4:22662811-22662830 | None:intergenic | 20.0% |
| !!! | ATTTAGAAATCGATTTGATT+TGG | - | chr4.4:22661975-22661994 | MS.gene32211:intron | 20.0% |
| !!! | GTCATAAAATCTTTTATGAA+TGG | + | chr4.4:22662280-22662299 | None:intergenic | 20.0% |
| !!! | TATTCTCATGCTTATTTTTT+AGG | - | chr4.4:22662068-22662087 | MS.gene32211:CDS | 20.0% |
| !!! | TTGGTTCATTTTTTTTTATC+TGG | - | chr4.4:22660999-22661018 | MS.gene32211:CDS | 20.0% |
| ! | AATTCAATTTAACAATCAGC+AGG | + | chr4.4:22662843-22662862 | None:intergenic | 25.0% |
| ! | AATTTCAAACCATTTACCTA+TGG | - | chr4.4:22660790-22660809 | MS.gene32211:intron | 25.0% |
| ! | ACCACTAAAGAAATGAAAAA+TGG | - | chr4.4:22662193-22662212 | MS.gene32211:CDS | 25.0% |
| ! | ACTAAAGAAATGAAAAATGG+AGG | - | chr4.4:22662196-22662215 | MS.gene32211:CDS | 25.0% |
| ! | GAAATTACTACAATTCCATA+TGG | - | chr4.4:22662220-22662239 | MS.gene32211:CDS | 25.0% |
| ! | GTGTATTAAAGACAATTCTA+TGG | - | chr4.4:22662757-22662776 | MS.gene32211:intron | 25.0% |
| ! | TTTGGCGTCTAATTATAAAT+AGG | - | chr4.4:22661116-22661135 | MS.gene32211:intron | 25.0% |
| !! | AAAAAACTGTTAGTCTCATA+AGG | - | chr4.4:22663853-22663872 | MS.gene32211:intron | 25.0% |
| !! | AAATTGAATTTCGGCATTTT+AGG | - | chr4.4:22662853-22662872 | MS.gene32211:intron | 25.0% |
| !! | TAAATAGGAGATACATTTTG+TGG | - | chr4.4:22661131-22661150 | MS.gene32211:intron | 25.0% |
| !! | TAATGAACTAAGGCATTAAA+CGG | + | chr4.4:22661184-22661203 | None:intergenic | 25.0% |
| !! | TTTCCTATATTCCATTCTTT+TGG | - | chr4.4:22662611-22662630 | MS.gene32211:CDS | 25.0% |
| !!! | ATTCTTCATTTTGCTATTGT+TGG | - | chr4.4:22661740-22661759 | MS.gene32211:CDS | 25.0% |
| !!! | TCCATTTTTCATTTCTTTAG+TGG | + | chr4.4:22662197-22662216 | None:intergenic | 25.0% |
| !!! | TTTGTTTGTCCATGTTTTTT+TGG | - | chr4.4:22661585-22661604 | MS.gene32211:intron | 25.0% |
| AAATTCTGCAATTTCATCCA+CGG | + | chr4.4:22663489-22663508 | None:intergenic | 30.0% | |
| AACAGTTAATCATAAGCTGT+TGG | - | chr4.4:22660843-22660862 | MS.gene32211:CDS | 30.0% | |
| AATAGTTAGTGGAGATGAAT+TGG | - | chr4.4:22661528-22661547 | MS.gene32211:intron | 30.0% | |
| AATCACACTTTAGTCATCAT+TGG | + | chr4.4:22661561-22661580 | None:intergenic | 30.0% | |
| ACAGTTAATCATAAGCTGTT+GGG | - | chr4.4:22660844-22660863 | MS.gene32211:CDS | 30.0% | |
| ACTTACACTCAAAGAATTTC+AGG | - | chr4.4:22662925-22662944 | MS.gene32211:intron | 30.0% | |
| AGAAGGTCCTATTAGATTTA+GGG | - | chr4.4:22663317-22663336 | MS.gene32211:intron | 30.0% | |
| ATTTGGTCAAATTATACCCT+GGG | - | chr4.4:22661819-22661838 | MS.gene32211:CDS | 30.0% | |
| CATCCAAAAGAATGGAATAT+AGG | + | chr4.4:22662617-22662636 | None:intergenic | 30.0% | |
| CTAAAGAATAAACAGATGCA+TGG | - | chr4.4:22662995-22663014 | MS.gene32211:intron | 30.0% | |
| GATGATATCTTCTTACCTTA+CGG | + | chr4.4:22660041-22660060 | None:intergenic | 30.0% | |
| GTACTCATAGATGCAAATAA+TGG | + | chr4.4:22661953-22661972 | None:intergenic | 30.0% | |
| GTGAAAGTAAAATAATTGCG+AGG | + | chr4.4:22660429-22660448 | None:intergenic | 30.0% | |
| GTTATTGTAAATAACGCCAT+AGG | + | chr4.4:22660809-22660828 | None:intergenic | 30.0% | |
| TAAATAACGCCATAGGTAAA+TGG | + | chr4.4:22660802-22660821 | None:intergenic | 30.0% | |
| TAATGAATGACATCTGTGAA+AGG | - | chr4.4:22662951-22662970 | MS.gene32211:intron | 30.0% | |
| TACTACAATTCCATATGGAA+TGG | - | chr4.4:22662225-22662244 | MS.gene32211:CDS | 30.0% | |
| TAGATCTCAGTGTTATCAAA+TGG | - | chr4.4:22663399-22663418 | MS.gene32211:intron | 30.0% | |
| TATCCACTAGTAATGAACTA+AGG | + | chr4.4:22661194-22661213 | None:intergenic | 30.0% | |
| TGCAGTTAAGAAATAGTTAG+TGG | - | chr4.4:22661517-22661536 | MS.gene32211:intron | 30.0% | |
| TTCGAATGGAAACAAGTAAA+AGG | + | chr4.4:22661225-22661244 | None:intergenic | 30.0% | |
| ! | ACTAACACCTTTTTCTTTTC+CGG | + | chr4.4:22660330-22660349 | None:intergenic | 30.0% |
| ! | CTATATTCCATTCTTTTGGA+TGG | - | chr4.4:22662615-22662634 | MS.gene32211:CDS | 30.0% |
| ! | GGATGAAATTGCAGAATTTT+GGG | - | chr4.4:22663490-22663509 | MS.gene32211:CDS | 30.0% |
| ! | TAACTAAATCTTTTACCCCA+GGG | + | chr4.4:22661838-22661857 | None:intergenic | 30.0% |
| ! | TAGGAAAAGTATAAGACACT+AGG | + | chr4.4:22662598-22662617 | None:intergenic | 30.0% |
| ! | TCATTACTAGTGGATATAAC+TGG | - | chr4.4:22661198-22661217 | MS.gene32211:intron | 30.0% |
| ! | TCTAAAGTGGATAAAACAGA+AGG | + | chr4.4:22660092-22660111 | None:intergenic | 30.0% |
| ! | TGGATGAAATTGCAGAATTT+TGG | - | chr4.4:22663489-22663508 | MS.gene32211:CDS | 30.0% |
| ! | TTAACTAAATCTTTTACCCC+AGG | + | chr4.4:22661839-22661858 | None:intergenic | 30.0% |
| ! | TTGTTTGGTGATATGACTTT+GGG | - | chr4.4:22663206-22663225 | MS.gene32211:intron | 30.0% |
| ! | TTTGTTTGGTGATATGACTT+TGG | - | chr4.4:22663205-22663224 | MS.gene32211:intron | 30.0% |
| ! | TTTTATGACACAAATTGGTC+AGG | - | chr4.4:22662291-22662310 | MS.gene32211:CDS | 30.0% |
| !! | AAATCGATTTGATTTGGTGA+TGG | - | chr4.4:22661981-22662000 | MS.gene32211:intron | 30.0% |
| !! | TGTTTCTGCTTTTGTTTGTT+TGG | - | chr4.4:22663191-22663210 | MS.gene32211:intron | 30.0% |
| !!! | GGTTTTTGAAACTACATATC+AGG | - | chr4.4:22663227-22663246 | MS.gene32211:intron | 30.0% |
| !!! | TTCTTTTTTAACATCTCCCT+TGG | + | chr4.4:22663044-22663063 | None:intergenic | 30.0% |
| AACATGATCAAGTTACCTGA+AGG | + | chr4.4:22663367-22663386 | None:intergenic | 35.0% | |
| AATAAACCAGCGAAAAGTCA+TGG | - | chr4.4:22662511-22662530 | MS.gene32211:CDS | 35.0% | |
| AATGTGTCCATCCAAAAGAA+TGG | + | chr4.4:22662625-22662644 | None:intergenic | 35.0% | |
| AATTTCATCCACGGTTATGA+TGG | + | chr4.4:22663480-22663499 | None:intergenic | 35.0% | |
| ACATGATCAAGTTACCTGAA+GGG | + | chr4.4:22663366-22663385 | None:intergenic | 35.0% | |
| ACATTTATCATGTCAGAGAC+TGG | + | chr4.4:22660603-22660622 | None:intergenic | 35.0% | |
| ACCATTAAAGTGAATGCTAC+AGG | + | chr4.4:22663170-22663189 | None:intergenic | 35.0% | |
| ACTGACAAAATCATGAAGTG+CGG | + | chr4.4:22661795-22661814 | None:intergenic | 35.0% | |
| AGCACAAGAGAAAAATGACA+TGG | + | chr4.4:22662363-22662382 | None:intergenic | 35.0% | |
| AGCAGGAAGAAATTTCATCT+CGG | + | chr4.4:22663119-22663138 | None:intergenic | 35.0% | |
| AGTGTTATCAAATGGCAGTA+TGG | - | chr4.4:22663407-22663426 | MS.gene32211:intron | 35.0% | |
| ATGCCTTAGTTCATTACTAG+TGG | - | chr4.4:22661188-22661207 | MS.gene32211:intron | 35.0% | |
| ATTTCATCCACGGTTATGAT+GGG | + | chr4.4:22663479-22663498 | None:intergenic | 35.0% | |
| CAGAAGGTCCTATTAGATTT+AGG | - | chr4.4:22663316-22663335 | MS.gene32211:intron | 35.0% | |
| CTAAATCTAATAGGACCTTC+TGG | + | chr4.4:22663318-22663337 | None:intergenic | 35.0% | |
| CTATTAGATTTAGGGGAGAA+GGG | - | chr4.4:22663325-22663344 | MS.gene32211:intron | 35.0% | |
| GAAGACAAGTTCAAAAGAGA+TGG | - | chr4.4:22662118-22662137 | MS.gene32211:CDS | 35.0% | |
| GAAGGTCCTATTAGATTTAG+GGG | - | chr4.4:22663318-22663337 | MS.gene32211:intron | 35.0% | |
| GACTACTTAATCATAGCTGT+AGG | - | chr4.4:22661374-22661393 | MS.gene32211:intron | 35.0% | |
| GAGACGCTTTATATTTGGAA+GGG | - | chr4.4:22663971-22663990 | MS.gene32211:CDS | 35.0% | |
| GAGTGTGAAAAAAATCCAGA+AGG | - | chr4.4:22663300-22663319 | MS.gene32211:intron | 35.0% | |
| GTAGAATTTAATCGGCGTTA+CGG | + | chr4.4:22660135-22660154 | None:intergenic | 35.0% | |
| GTCAACACATTTAATACTCC+TGG | - | chr4.4:22661404-22661423 | MS.gene32211:intron | 35.0% | |
| TAATCATAAGCTGTTGGGTT+TGG | - | chr4.4:22660849-22660868 | MS.gene32211:CDS | 35.0% | |
| TAATGCACCAGTAAGAAACA+CGG | + | chr4.4:22660715-22660734 | None:intergenic | 35.0% | |
| TACACTCAAAGAATTTCAGG+AGG | - | chr4.4:22662928-22662947 | MS.gene32211:intron | 35.0% | |
| TAGAGAAACGTTGGAAGAAT+TGG | + | chr4.4:22659967-22659986 | None:intergenic | 35.0% | |
| TCATTAGCATGTGACATAGT+TGG | - | chr4.4:22660759-22660778 | MS.gene32211:intron | 35.0% | |
| TCCTGTAGCATTCACTTTAA+TGG | - | chr4.4:22663166-22663185 | MS.gene32211:intron | 35.0% | |
| TGAAAAAGAAGAATTCGTCG+TGG | - | chr4.4:22661346-22661365 | MS.gene32211:intron | 35.0% | |
| TGACACAAACAAGTCAACAT+CGG | + | chr4.4:22660664-22660683 | None:intergenic | 35.0% | |
| TGACCTTCCTGAAGATATTA+CGG | + | chr4.4:22660512-22660531 | None:intergenic | 35.0% | |
| TGAGACGCTTTATATTTGGA+AGG | - | chr4.4:22663970-22663989 | MS.gene32211:CDS | 35.0% | |
| TGGATGAGACGCTTTATATT+TGG | - | chr4.4:22663966-22663985 | MS.gene32211:CDS | 35.0% | |
| TTCCATCCGGTTAAAACATT+TGG | + | chr4.4:22663280-22663299 | None:intergenic | 35.0% | |
| TTTAGTTAAAATCACGCTCC+TGG | - | chr4.4:22661850-22661869 | MS.gene32211:CDS | 35.0% | |
| TTTGGTCAAATTATACCCTG+GGG | - | chr4.4:22661820-22661839 | MS.gene32211:CDS | 35.0% | |
| ! | ACTTCATGATTTTGTCAGTG+AGG | - | chr4.4:22661796-22661815 | MS.gene32211:CDS | 35.0% |
| ! | ATTTAATACTCCTGGTGTCA+CGG | - | chr4.4:22661412-22661431 | MS.gene32211:intron | 35.0% |
| ! | CAATAAAACATGCACTGATG+AGG | + | chr4.4:22663635-22663654 | None:intergenic | 35.0% |
| ! | GATTTGGTCAAATTATACCC+TGG | - | chr4.4:22661818-22661837 | MS.gene32211:CDS | 35.0% |
| ! | GGAGAATTGCCATTTCTTAA+AGG | - | chr4.4:22661433-22661452 | MS.gene32211:CDS | 35.0% |
| ! | TGATTTTGTCAGTGAGGATT+TGG | - | chr4.4:22661802-22661821 | MS.gene32211:CDS | 35.0% |
| !! | AAAGAAAAAGGTGTTAGTGC+TGG | - | chr4.4:22660332-22660351 | MS.gene32211:intron | 35.0% |
| !! | AAGAAAAAGGTGTTAGTGCT+GGG | - | chr4.4:22660333-22660352 | MS.gene32211:intron | 35.0% |
| !! | AGAGGAATCTTGTTCTAAAG+TGG | + | chr4.4:22660105-22660124 | None:intergenic | 35.0% |
| !! | GATGGTATTGATGTGAAAAC+AGG | - | chr4.4:22662136-22662155 | MS.gene32211:CDS | 35.0% |
| !! | GCATGTTTTATTGTTCCTCA+AGG | - | chr4.4:22663642-22663661 | MS.gene32211:CDS | 35.0% |
| !! | GGCATTTTAGGAAGATATTG+CGG | - | chr4.4:22662865-22662884 | MS.gene32211:intron | 35.0% |
| !!! | CTTCATTTTGCTATTGTTGG+AGG | - | chr4.4:22661743-22661762 | MS.gene32211:CDS | 35.0% |
| !!! | GTGTTTCACAGCATTTTTTG+TGG | - | chr4.4:22661478-22661497 | MS.gene32211:CDS | 35.0% |
| !!! | TTTTTTCACACTCTTCCATC+CGG | + | chr4.4:22663293-22663312 | None:intergenic | 35.0% |
| ACCAAGTGCATACACATTGT+CGG | + | chr4.4:22662480-22662499 | None:intergenic | 40.0% | |
| ACCTAAATGCTTGTACCTTG+AGG | + | chr4.4:22663660-22663679 | None:intergenic | 40.0% | |
| AGACAATTCTATGGACGATC+TGG | - | chr4.4:22662766-22662785 | MS.gene32211:intron | 40.0% | |
| CAACCATTCATCAGTAGCTA+TGG | + | chr4.4:22662444-22662463 | None:intergenic | 40.0% | |
| CCTATTAGATTTAGGGGAGA+AGG | - | chr4.4:22663324-22663343 | MS.gene32211:intron | 40.0% | |
| CCTTCTCCCCTAAATCTAAT+AGG | + | chr4.4:22663327-22663346 | None:intergenic | 40.0% | |
| CGAAAAGTCATGGTACCTAT+TGG | - | chr4.4:22662521-22662540 | MS.gene32211:CDS | 40.0% | |
| CTTCCTGAAGATATTACGGA+CGG | + | chr4.4:22660508-22660527 | None:intergenic | 40.0% | |
| GACAATTCTATGGACGATCT+GGG | - | chr4.4:22662767-22662786 | MS.gene32211:intron | 40.0% | |
| GAGAAATAGCATCAGCCAAT+AGG | + | chr4.4:22662539-22662558 | None:intergenic | 40.0% | |
| GATATCTTCTTACCTTACGG+TGG | + | chr4.4:22660038-22660057 | None:intergenic | 40.0% | |
| GATGAATGGTTGAGAGTTGA+GGG | - | chr4.4:22662452-22662471 | MS.gene32211:intron | 40.0% | |
| GTAATATCTTCAGGAAGGTC+AGG | - | chr4.4:22660511-22660530 | MS.gene32211:intron | 40.0% | |
| GTTAAAACATTTGGCCAGGT+AGG | + | chr4.4:22663271-22663290 | None:intergenic | 40.0% | |
| TACATGTGTGTGCATTGTAC+AGG | - | chr4.4:22661625-22661644 | MS.gene32211:intron | 40.0% | |
| TCCATTCGAACAGAAACATG+TGG | - | chr4.4:22661235-22661254 | MS.gene32211:intron | 40.0% | |
| TCCTCAAGGTACAAGCATTT+AGG | - | chr4.4:22663656-22663675 | MS.gene32211:CDS | 40.0% | |
| TGAACTGAGAGTCATAGTCA+CGG | + | chr4.4:22659997-22660016 | None:intergenic | 40.0% | |
| TGATGAATGGTTGAGAGTTG+AGG | - | chr4.4:22662451-22662470 | MS.gene32211:intron | 40.0% | |
| TGATGTGAAAACAGGATCCA+TGG | - | chr4.4:22662144-22662163 | MS.gene32211:CDS | 40.0% | |
| TGTGGTATTCTGTCTATGCA+AGG | - | chr4.4:22663762-22663781 | MS.gene32211:intron | 40.0% | |
| TTAACAATCAGCAGGAAGAG+AGG | + | chr4.4:22662835-22662854 | None:intergenic | 40.0% | |
| TTAGATATAGCTCCACCTGA+GGG | + | chr4.4:22662979-22662998 | None:intergenic | 40.0% | |
| TTCCTGAAGATATTACGGAC+GGG | + | chr4.4:22660507-22660526 | None:intergenic | 40.0% | |
| TTTAGATATAGCTCCACCTG+AGG | + | chr4.4:22662980-22662999 | None:intergenic | 40.0% | |
| TTTCATCCACGGTTATGATG+GGG | + | chr4.4:22663478-22663497 | None:intergenic | 40.0% | |
| ! | ATGCACTGATGAGGAAACAT+TGG | + | chr4.4:22663626-22663645 | None:intergenic | 40.0% |
| ! | GATCCACACTTGGGATATTT+TGG | - | chr4.4:22661098-22661117 | MS.gene32211:intron | 40.0% |
| ! | TCCACATGTTTCTGTTCGAA+TGG | + | chr4.4:22661239-22661258 | None:intergenic | 40.0% |
| ! | TTAGGTCAATTTGCTCCTCT+GGG | - | chr4.4:22663674-22663693 | MS.gene32211:intron | 40.0% |
| ! | TTTAGGTCAATTTGCTCCTC+TGG | - | chr4.4:22663673-22663692 | MS.gene32211:intron | 40.0% |
| !! | GATTCTTACATGTGCTGGTT+GGG | - | chr4.4:22662003-22662022 | MS.gene32211:intron | 40.0% |
| !! | TCCATGGTTGTGAAAGTATC+TGG | - | chr4.4:22662160-22662179 | MS.gene32211:CDS | 40.0% |
| !! | TGATGGATTCTTACATGTGC+TGG | - | chr4.4:22661998-22662017 | MS.gene32211:intron | 40.0% |
| !! | TTATGGTTTGGTTGATGCAG+TGG | - | chr4.4:22660255-22660274 | MS.gene32211:CDS | 40.0% |
| !!! | ACCTGGCCAAATGTTTTAAC+CGG | - | chr4.4:22663271-22663290 | MS.gene32211:intron | 40.0% |
| !!! | CATTTTGCTATTGTTGGAGG+TGG | - | chr4.4:22661746-22661765 | MS.gene32211:CDS | 40.0% |
| !!! | GGAAGGTTTTAGAGAAACGT+TGG | + | chr4.4:22659976-22659995 | None:intergenic | 40.0% |
| !!! | TGTAGCACTGACACTTTTGA+TGG | - | chr4.4:22660568-22660587 | MS.gene32211:intron | 40.0% |
| AACCCGTCCGTAATATCTTC+AGG | - | chr4.4:22660502-22660521 | MS.gene32211:intron | 45.0% | |
| AAGACTGATGCAGACAACTC+AGG | - | chr4.4:22662899-22662918 | MS.gene32211:intron | 45.0% | |
| ACCGACAATGTGTATGCACT+TGG | - | chr4.4:22662476-22662495 | MS.gene32211:intron | 45.0% | |
| ACGCCAAAATATCCCAAGTG+TGG | + | chr4.4:22661104-22661123 | None:intergenic | 45.0% | |
| AGTGCTTCCGTGTTTCTTAC+TGG | - | chr4.4:22660705-22660724 | MS.gene32211:intron | 45.0% | |
| AGTTAAAATCACGCTCCTGG+AGG | - | chr4.4:22661853-22661872 | MS.gene32211:CDS | 45.0% | |
| ATTTCTTCCTGCTACAGCTC+AGG | - | chr4.4:22663126-22663145 | MS.gene32211:intron | 45.0% | |
| CAATTGGACACAGCAGTCAA+TGG | - | chr4.4:22663738-22663757 | MS.gene32211:intron | 45.0% | |
| CCAATTGAAACCCAATCTCC+AGG | + | chr4.4:22663725-22663744 | None:intergenic | 45.0% | |
| CCTGGAGATTGGGTTTCAAT+TGG | - | chr4.4:22663722-22663741 | MS.gene32211:intron | 45.0% | |
| CGTCCGTAATATCTTCAGGA+AGG | - | chr4.4:22660506-22660525 | MS.gene32211:intron | 45.0% | |
| CTCTCTTCATCACTCACACT+AGG | + | chr4.4:22661713-22661732 | None:intergenic | 45.0% | |
| GATCTGCTGAAGGAATCCAA+GGG | - | chr4.4:22663025-22663044 | MS.gene32211:intron | 45.0% | |
| GCCAGATACTTTCACAACCA+TGG | + | chr4.4:22662164-22662183 | None:intergenic | 45.0% | |
| GGAGTCCACATTGGAAAAAG+CGG | + | chr4.4:22663098-22663117 | None:intergenic | 45.0% | |
| GGCTGTTGCTACATCTGAAT+CGG | - | chr4.4:22660302-22660321 | MS.gene32211:intron | 45.0% | |
| GGTGGAAAAATCCGCCATAT+CGG | + | chr4.4:22663452-22663471 | None:intergenic | 45.0% | |
| GGTTCATCTGATCCACACTT+GGG | - | chr4.4:22661089-22661108 | MS.gene32211:intron | 45.0% | |
| GTGCCATAGCTACTGATGAA+TGG | - | chr4.4:22662438-22662457 | MS.gene32211:intron | 45.0% | |
| TCCGGTTAAAACATTTGGCC+AGG | + | chr4.4:22663275-22663294 | None:intergenic | 45.0% | |
| TCTCAATGATCCGCGATATG+AGG | - | chr4.4:22660389-22660408 | MS.gene32211:intron | 45.0% | |
| TGATCTGCTGAAGGAATCCA+AGG | - | chr4.4:22663024-22663043 | MS.gene32211:intron | 45.0% | |
| TGGTTCATCTGATCCACACT+TGG | - | chr4.4:22661088-22661107 | MS.gene32211:intron | 45.0% | |
| TTCCATATGGAATGGCTGTC+TGG | - | chr4.4:22662233-22662252 | MS.gene32211:CDS | 45.0% | |
| TTTCATCTCGGAGTCCACAT+TGG | + | chr4.4:22663107-22663126 | None:intergenic | 45.0% | |
| ! | CATAAGCTGTTGGGTTTGGT+TGG | - | chr4.4:22660853-22660872 | MS.gene32211:CDS | 45.0% |
| ! | CTCAGCTAGCTTAGAAATGC+AGG | + | chr4.4:22662738-22662757 | None:intergenic | 45.0% |
| ! | GGATTCTTACATGTGCTGGT+TGG | - | chr4.4:22662002-22662021 | MS.gene32211:intron | 45.0% |
| ! | TAGGTACCATGACTTTTCGC+TGG | + | chr4.4:22662520-22662539 | None:intergenic | 45.0% |
| ! | TATCAGGTTGCATCTCAGCA+AGG | - | chr4.4:22663243-22663262 | MS.gene32211:intron | 45.0% |
| ! | TTTTTACCTCGCCGATATGG+CGG | - | chr4.4:22663438-22663457 | MS.gene32211:CDS | 45.0% |
| !! | ATCGGTGCCGGAAAAGAAAA+AGG | - | chr4.4:22660320-22660339 | MS.gene32211:intron | 45.0% |
| !!! | CAAGACCGCTTTTTCCAATG+TGG | - | chr4.4:22663090-22663109 | MS.gene32211:intron | 45.0% |
| !!! | GGCCAAATGTTTTAACCGGA+TGG | - | chr4.4:22663275-22663294 | MS.gene32211:intron | 45.0% |
| !! | ATTTATTTATGAATTAATTA+TGG | - | chr4.4:22660238-22660257 | MS.gene32211:CDS | 5.0% |
| AAAAATCCGCCATATCGGCG+AGG | + | chr4.4:22663447-22663466 | None:intergenic | 50.0% | |
| ACCATACCCCATCATAACCG+TGG | - | chr4.4:22663469-22663488 | MS.gene32211:CDS | 50.0% | |
| ACGACGTGAACCTCATATCG+CGG | + | chr4.4:22660402-22660421 | None:intergenic | 50.0% | |
| ACGGTACCGCAAGTAACACT+AGG | + | chr4.4:22660462-22660481 | None:intergenic | 50.0% | |
| AGGTCTAGCAGCGTTGTCTA+TGG | + | chr4.4:22663539-22663558 | None:intergenic | 50.0% | |
| ATTGTTGGAGGTGGTCCAAC+TGG | - | chr4.4:22661755-22661774 | MS.gene32211:CDS | 50.0% | |
| CAAATGGCAGTATGGCGAGA+GGG | - | chr4.4:22663415-22663434 | MS.gene32211:intron | 50.0% | |
| CAAGTAACACTAGGCAGCAG+AGG | + | chr4.4:22660453-22660472 | None:intergenic | 50.0% | |
| CGGCGTTACGGCTAAATTAG+AGG | + | chr4.4:22660123-22660142 | None:intergenic | 50.0% | |
| CTGAGAGTCATAGTCACGGA+AGG | + | chr4.4:22659993-22660012 | None:intergenic | 50.0% | |
| GACACAGCAGTCAATGGTTG+TGG | - | chr4.4:22663744-22663763 | MS.gene32211:intron | 50.0% | |
| GACCAGACAGCCATTCCATA+TGG | + | chr4.4:22662238-22662257 | None:intergenic | 50.0% | |
| GCTGTCTGGTCAACTGGTAT+TGG | - | chr4.4:22662247-22662266 | MS.gene32211:CDS | 50.0% | |
| GGGCAGGAACAAGTTTCTTG+AGG | - | chr4.4:22660364-22660383 | MS.gene32211:intron | 50.0% | |
| TCAAATGGCAGTATGGCGAG+AGG | - | chr4.4:22663414-22663433 | MS.gene32211:intron | 50.0% | |
| TCTAGCAGCGTTGTCTATGG+CGG | + | chr4.4:22663536-22663555 | None:intergenic | 50.0% | |
| TGAACAGCAAGCAAGTCAGC+TGG | - | chr4.4:22663916-22663935 | MS.gene32211:intron | 50.0% | |
| TGCACAGCTACCTGGAGATT+GGG | - | chr4.4:22663712-22663731 | MS.gene32211:intron | 50.0% | |
| TGCTACATCTGAATCGGTGC+CGG | - | chr4.4:22660308-22660327 | MS.gene32211:intron | 50.0% | |
| TGGCATTGCTGATCTGCTGA+AGG | - | chr4.4:22663015-22663034 | MS.gene32211:intron | 50.0% | |
| ! | AAGGTGTTAGTGCTGGGAAC+TGG | - | chr4.4:22660339-22660358 | MS.gene32211:intron | 50.0% |
| ! | ACGGTTATGATGGGGTATGG+TGG | + | chr4.4:22663470-22663489 | None:intergenic | 50.0% |
| ! | GGGTTTTTACCTCGCCGATA+TGG | - | chr4.4:22663435-22663454 | MS.gene32211:intron | 50.0% |
| ! | GTTAGTGCTGGGAACTGGTT+GGG | - | chr4.4:22660344-22660363 | MS.gene32211:intron | 50.0% |
| ! | TCCACGGTTATGATGGGGTA+TGG | + | chr4.4:22663473-22663492 | None:intergenic | 50.0% |
| ! | TGGTCTTTTGGCATACGGTG+AGG | - | chr4.4:22660281-22660300 | MS.gene32211:intron | 50.0% |
| ! | TGTTACTTGCGGTACCGTTG+AGG | - | chr4.4:22660464-22660483 | MS.gene32211:intron | 50.0% |
| ! | TGTTAGTGCTGGGAACTGGT+TGG | - | chr4.4:22660343-22660362 | MS.gene32211:intron | 50.0% |
| !! | ACGGAAGCACTTACACACAC+AGG | + | chr4.4:22660696-22660715 | None:intergenic | 50.0% |
| !! | CATCTGTGAAAGGTACCCTC+AGG | - | chr4.4:22662961-22662980 | MS.gene32211:intron | 50.0% |
| !! | CTGCTGCCTAGTGTTACTTG+CGG | - | chr4.4:22660453-22660472 | MS.gene32211:intron | 50.0% |
| !! | TCTTACATGTGCTGGTTGGG+TGG | - | chr4.4:22662006-22662025 | MS.gene32211:intron | 50.0% |
| !! | TGGTTTGGTTGATGCAGTGG+CGG | - | chr4.4:22660258-22660277 | MS.gene32211:CDS | 50.0% |
| AAAATCACGCTCCTGGAGGC+TGG | - | chr4.4:22661857-22661876 | MS.gene32211:intron | 55.0% | |
| ACATGCACCTGAGCTGTAGC+AGG | + | chr4.4:22663136-22663155 | None:intergenic | 55.0% | |
| AGATATGACCTCCAGCCTCC+AGG | + | chr4.4:22661871-22661890 | None:intergenic | 55.0% | |
| CACAATGCTGCGAGCCTCAA+CGG | + | chr4.4:22660481-22660500 | None:intergenic | 55.0% | |
| CTGCACAGCTACCTGGAGAT+TGG | - | chr4.4:22663711-22663730 | MS.gene32211:intron | 55.0% | |
| CTTACCTTACGGTGGTGCAG+AGG | + | chr4.4:22660030-22660049 | None:intergenic | 55.0% | |
| GCTGCAAACTCCACTCCAGT+TGG | + | chr4.4:22661773-22661792 | None:intergenic | 55.0% | |
| GGAATGGCTGTCTGGTCAAC+TGG | - | chr4.4:22662241-22662260 | MS.gene32211:CDS | 55.0% | |
| TGGCAATTCTCCGTGACACC+AGG | + | chr4.4:22661425-22661444 | None:intergenic | 55.0% | |
| TTCTCCTCTGCACCACCGTA+AGG | - | chr4.4:22660023-22660042 | MS.gene32211:intron | 55.0% | |
| ! | ATCTCAGCAAGGCACCTACC+TGG | - | chr4.4:22663254-22663273 | MS.gene32211:intron | 55.0% |
| ! | ATGCAGTGGCGGTGGTCTTT+TGG | - | chr4.4:22660269-22660288 | MS.gene32211:CDS | 55.0% |
| ! | GGCGGTGGTCTTTTGGCATA+CGG | - | chr4.4:22660276-22660295 | MS.gene32211:CDS | 55.0% |
| ! | GGTCAATTTGCTCCTCTGGG+AGG | - | chr4.4:22663677-22663696 | MS.gene32211:intron | 55.0% |
| ! | TTTGGTTGATGCAGTGGCGG+TGG | - | chr4.4:22660261-22660280 | MS.gene32211:CDS | 55.0% |
| !! | CTGTGAAAGGTACCCTCAGG+TGG | - | chr4.4:22662964-22662983 | MS.gene32211:intron | 55.0% |
| !! | GTCATCGGTTCAAGCCCTTC+AGG | - | chr4.4:22663349-22663368 | MS.gene32211:intron | 55.0% |
| !! | TTAGGGGAGAAGGGCGTCAT+CGG | - | chr4.4:22663334-22663353 | MS.gene32211:intron | 55.0% |
| AGCAAGTCAGCTGGCGCACA+AGG | - | chr4.4:22663925-22663944 | MS.gene32211:CDS | 60.0% | |
| CAGACAGCTGCACAGCTACC+TGG | - | chr4.4:22663704-22663723 | MS.gene32211:intron | 60.0% | |
| CGTTGAGGCTCGCAGCATTG+TGG | - | chr4.4:22660479-22660498 | MS.gene32211:intron | 60.0% | |
| GCAAGTCAGCTGGCGCACAA+GGG | - | chr4.4:22663926-22663945 | MS.gene32211:CDS | 60.0% | |
| TGGAGGTGGTCCAACTGGAG+TGG | - | chr4.4:22661760-22661779 | MS.gene32211:CDS | 60.0% | |
| ! | GCAGCGTTGTCTATGGCGGA+TGG | + | chr4.4:22663532-22663551 | None:intergenic | 60.0% |
| !! | CTATGGCGGATGGCGGTTTG+TGG | + | chr4.4:22663522-22663541 | None:intergenic | 60.0% |
| !! | GCGTTGTCTATGGCGGATGG+CGG | + | chr4.4:22663529-22663548 | None:intergenic | 60.0% |
| ATCACGCTCCTGGAGGCTGG+AGG | - | chr4.4:22661860-22661879 | MS.gene32211:intron | 65.0% | |
| GTGCTGGGAACTGGTTGGGC+AGG | - | chr4.4:22660348-22660367 | MS.gene32211:intron | 65.0% | |
| ! | TGGCGGATGGCGGTTTGTGG+CGG | + | chr4.4:22663519-22663538 | None:intergenic | 65.0% |
| GCTGTCTGCTCGCCTCCCAG+AGG | + | chr4.4:22663692-22663711 | None:intergenic | 70.0% | |
| ! | CGGATGGCGGTTTGTGGCGG+AGG | + | chr4.4:22663516-22663535 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22659953 | 22664010 | 22659953 | ID=MS.gene32211 |
| chr4.4 | mRNA | 22659953 | 22664010 | 22659953 | ID=MS.gene32211.t1;Parent=MS.gene32211 |
| chr4.4 | exon | 22663919 | 22664010 | 22663919 | ID=MS.gene32211.t1.exon1;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22663919 | 22664010 | 22663919 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22663436 | 22663688 | 22663436 | ID=MS.gene32211.t1.exon2;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22663436 | 22663688 | 22663436 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22662509 | 22662715 | 22662509 | ID=MS.gene32211.t1.exon3;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22662509 | 22662715 | 22662509 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22662066 | 22662316 | 22662066 | ID=MS.gene32211.t1.exon4;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22662066 | 22662316 | 22662066 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22661651 | 22661873 | 22661651 | ID=MS.gene32211.t1.exon5;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22661651 | 22661873 | 22661651 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22661431 | 22661535 | 22661431 | ID=MS.gene32211.t1.exon6;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22661431 | 22661535 | 22661431 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22660816 | 22661088 | 22660816 | ID=MS.gene32211.t1.exon7;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22660816 | 22661088 | 22660816 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22660593 | 22660714 | 22660593 | ID=MS.gene32211.t1.exon8;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22660593 | 22660714 | 22660593 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22660180 | 22660299 | 22660180 | ID=MS.gene32211.t1.exon9;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22660180 | 22660299 | 22660180 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| chr4.4 | exon | 22659953 | 22660040 | 22659953 | ID=MS.gene32211.t1.exon10;Parent=MS.gene32211.t1 |
| chr4.4 | CDS | 22659953 | 22660040 | 22659953 | ID=cds.MS.gene32211.t1;Parent=MS.gene32211.t1 |
| Gene Sequence |
| Protein sequence |
