Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03971.t1 | XP_013460271.1 | 98.6 | 504 | 7 | 0 | 1 | 504 | 1 | 504 | 7.10E-293 | 1015.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03971.t1 | M0ZYF3 | 75.2 | 504 | 116 | 2 | 1 | 504 | 1 | 495 | 3.2e-225 | 782.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03971.t1 | A0A072UXK7 | 98.6 | 504 | 7 | 0 | 1 | 504 | 1 | 504 | 5.1e-293 | 1015.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03971 | MS.gene53986 | PPI |
| MS.gene01745 | MS.gene03971 | PPI |
| MS.gene03971 | MS.gene066720 | PPI |
| MS.gene069940 | MS.gene03971 | PPI |
| MS.gene03971 | MS.gene012456 | PPI |
| MS.gene01336 | MS.gene03971 | PPI |
| MS.gene03971 | MS.gene002362 | PPI |
| MS.gene048610 | MS.gene03971 | PPI |
| MS.gene02306 | MS.gene03971 | PPI |
| MS.gene052562 | MS.gene03971 | PPI |
| MS.gene035652 | MS.gene03971 | PPI |
| MS.gene009833 | MS.gene03971 | PPI |
| MS.gene03971 | MS.gene57021 | PPI |
| MS.gene03971 | MS.gene018389 | PPI |
| MS.gene064199 | MS.gene03971 | PPI |
| MS.gene046054 | MS.gene03971 | PPI |
| MS.gene57946 | MS.gene03971 | PPI |
| MS.gene32211 | MS.gene03971 | PPI |
| MS.gene048480 | MS.gene03971 | PPI |
| MS.gene50180 | MS.gene03971 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03971.t1 | MTR_3g464380 | 98.611 | 504 | 7 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1028 |
| MS.gene03971.t1 | MTR_5g071250 | 78.063 | 506 | 104 | 3 | 1 | 504 | 1 | 501 | 0.0 | 796 |
| MS.gene03971.t1 | MTR_4g090580 | 73.289 | 453 | 120 | 1 | 52 | 504 | 92 | 543 | 0.0 | 711 |
| MS.gene03971.t1 | MTR_5g071250 | 79.397 | 398 | 75 | 3 | 1 | 396 | 1 | 393 | 0.0 | 622 |
| MS.gene03971.t1 | MTR_2g011730 | 38.375 | 357 | 202 | 9 | 55 | 401 | 42 | 390 | 9.73e-74 | 244 |
| MS.gene03971.t1 | MTR_2g011730 | 37.190 | 121 | 65 | 4 | 389 | 504 | 464 | 578 | 3.84e-11 | 65.9 |
| MS.gene03971.t1 | MTR_4g045997 | 40.606 | 330 | 180 | 8 | 59 | 378 | 49 | 372 | 6.82e-73 | 241 |
| MS.gene03971.t1 | MTR_4g045997 | 40.606 | 330 | 180 | 8 | 59 | 378 | 49 | 372 | 8.63e-73 | 241 |
| MS.gene03971.t1 | MTR_4g045997 | 34.483 | 145 | 67 | 5 | 376 | 504 | 445 | 577 | 2.52e-14 | 75.9 |
| MS.gene03971.t1 | MTR_4g091240 | 40.248 | 323 | 180 | 7 | 66 | 378 | 51 | 370 | 2.52e-72 | 240 |
| MS.gene03971.t1 | MTR_4g091240 | 36.364 | 121 | 66 | 4 | 389 | 504 | 464 | 578 | 3.46e-11 | 65.9 |
| MS.gene03971.t1 | MTR_4g045993 | 40.122 | 329 | 173 | 9 | 66 | 378 | 44 | 364 | 1.91e-70 | 235 |
| MS.gene03971.t1 | MTR_4g091240 | 37.594 | 266 | 155 | 6 | 123 | 378 | 2 | 266 | 1.93e-51 | 182 |
| MS.gene03971.t1 | MTR_4g091240 | 36.364 | 121 | 66 | 4 | 389 | 504 | 360 | 474 | 2.27e-11 | 66.2 |
| MS.gene03971.t1 | MTR_0931s0010 | 30.184 | 434 | 265 | 13 | 75 | 504 | 243 | 642 | 5.12e-39 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03971.t1 | AT1G07180 | 72.656 | 512 | 130 | 3 | 1 | 504 | 1 | 510 | 0.0 | 753 |
| MS.gene03971.t1 | AT2G29990 | 73.922 | 510 | 125 | 4 | 1 | 504 | 1 | 508 | 0.0 | 751 |
| MS.gene03971.t1 | AT4G28220 | 39.319 | 323 | 182 | 6 | 70 | 382 | 52 | 370 | 1.21e-72 | 239 |
| MS.gene03971.t1 | AT4G28220 | 39.319 | 323 | 182 | 6 | 70 | 382 | 52 | 370 | 2.90e-72 | 240 |
| MS.gene03971.t1 | AT4G28220 | 37.705 | 122 | 65 | 4 | 388 | 504 | 456 | 571 | 4.55e-13 | 72.0 |
| MS.gene03971.t1 | AT4G21490 | 37.719 | 342 | 200 | 6 | 67 | 399 | 55 | 392 | 3.71e-64 | 219 |
| MS.gene03971.t1 | AT4G21490 | 37.901 | 343 | 197 | 7 | 67 | 399 | 55 | 391 | 9.35e-64 | 218 |
| MS.gene03971.t1 | AT2G20800 | 38.081 | 344 | 199 | 6 | 64 | 398 | 60 | 398 | 1.03e-63 | 218 |
| MS.gene03971.t1 | AT2G20800 | 36.885 | 122 | 66 | 4 | 388 | 504 | 467 | 582 | 7.38e-13 | 71.2 |
| MS.gene03971.t1 | AT4G05020 | 39.130 | 322 | 182 | 6 | 66 | 378 | 57 | 373 | 1.09e-63 | 217 |
| MS.gene03971.t1 | AT4G05020 | 39.130 | 322 | 182 | 6 | 66 | 378 | 57 | 373 | 3.05e-63 | 217 |
| MS.gene03971.t1 | AT5G08740 | 25.325 | 462 | 267 | 17 | 65 | 491 | 78 | 496 | 4.18e-19 | 90.9 |
Find 116 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGTGTGTTAAACAAAAT+TGG | 0.218164 | 3.2:-54838346 | MS.gene03971:CDS |
| AACCTTCCACCAGGAGCTTT+TGG | 0.230258 | 3.2:+54838754 | None:intergenic |
| GTCACCAATTATTCAATCTT+TGG | 0.234216 | 3.2:-54838782 | MS.gene03971:CDS |
| GGATCACATCCTTCTACTTT+TGG | 0.242726 | 3.2:-54839944 | MS.gene03971:CDS |
| TGAGGTTCCATTTGGTTTGC+TGG | 0.243195 | 3.2:-54838827 | MS.gene03971:CDS |
| TATGGTGTTTACACCTCTTT+TGG | 0.265050 | 3.2:-54840743 | MS.gene03971:CDS |
| GAATTCAACCTGCTATTTCT+AGG | 0.268257 | 3.2:-54840666 | MS.gene03971:CDS |
| TTCCATTTGGTTTGCTGGTA+TGG | 0.285985 | 3.2:-54838822 | MS.gene03971:CDS |
| CCTTCACATGAGTATATCTT+TGG | 0.296433 | 3.2:+54839377 | None:intergenic |
| AAGCCTAATGATTATCCTTC+AGG | 0.297969 | 3.2:-54840895 | MS.gene03971:CDS |
| CATCAGATAGCATCAAATTT+AGG | 0.303993 | 3.2:+54839846 | None:intergenic |
| GGTTTCTCATGAGGCTTTGT+TGG | 0.310538 | 3.2:+54840865 | None:intergenic |
| GAACCTCAGTACCATCATTT+AGG | 0.327904 | 3.2:+54838842 | None:intergenic |
| AGGTCCAAAGATTGAATAAT+TGG | 0.328338 | 3.2:+54838778 | None:intergenic |
| CAATAGGTTGGGAACTGAAA+TGG | 0.337376 | 3.2:+54840935 | None:intergenic |
| AGATGATGATTTAATGTTGT+TGG | 0.346861 | 3.2:+54841014 | None:intergenic |
| AGAGTGGTTGTGCTTGGTTC+AGG | 0.350172 | 3.2:-54840841 | MS.gene03971:CDS |
| TGGATTACAACTCTTATATT+CGG | 0.358788 | 3.2:-54837993 | MS.gene03971:CDS |
| GATTCTATGTATTTATCAAC+TGG | 0.372762 | 3.2:-54838013 | MS.gene03971:CDS |
| AAACCTGAAGGATAATCATT+AGG | 0.377669 | 3.2:+54840892 | None:intergenic |
| GCAGGTTGAATTCTTCCAAT+AGG | 0.380849 | 3.2:+54840676 | None:intergenic |
| TAATGATTATCCTTCAGGTT+TGG | 0.388322 | 3.2:-54840890 | MS.gene03971:CDS |
| TGCATCAATGGCAGTACAAT+TGG | 0.399061 | 3.2:+54840618 | None:intergenic |
| GTGCTTGGTTCAGGTTGGGC+TGG | 0.402633 | 3.2:-54840832 | MS.gene03971:CDS |
| CATTGTGTTGTTGTGGGAGG+TGG | 0.411417 | 3.2:-54839457 | MS.gene03971:CDS |
| ATGCAGACTCATGAAGGGTT+TGG | 0.414779 | 3.2:-54840809 | MS.gene03971:CDS |
| GAAAAGTGAAAGATGGTAAG+AGG | 0.417719 | 3.2:+54840962 | None:intergenic |
| GGTTTGCTGGTATGGTCTAC+TGG | 0.419015 | 3.2:-54838814 | MS.gene03971:CDS |
| CTCGGCAGCATGGCAACTAT+TGG | 0.420711 | 3.2:-54838253 | MS.gene03971:CDS |
| GATGGTACTGAGGTTCCATT+TGG | 0.422519 | 3.2:-54838835 | MS.gene03971:CDS |
| ATGCTCATGCAGGAGGGAAA+AGG | 0.423577 | 3.2:-54838113 | MS.gene03971:intron |
| GTACAAGATGTGTTCTCAAT+AGG | 0.425903 | 3.2:-54838593 | MS.gene03971:CDS |
| CCTTGAATTCCAAAAGTAGA+AGG | 0.426636 | 3.2:+54839935 | None:intergenic |
| AGATCAGTTGCTGAACCTAT+TGG | 0.427288 | 3.2:-54840691 | MS.gene03971:CDS |
| TTGATGCTATCTGATGTTCC+AGG | 0.430389 | 3.2:-54839839 | MS.gene03971:intron |
| GGTTGTGCTTGGTTCAGGTT+GGG | 0.436398 | 3.2:-54840836 | MS.gene03971:CDS |
| GAACCAAGCACAACCACTCT+TGG | 0.442260 | 3.2:+54840844 | None:intergenic |
| TTTCAGTTCCCAACCTATTG+AGG | 0.450701 | 3.2:-54840932 | MS.gene03971:CDS |
| GCTTACCTTTGTCAACTGTT+TGG | 0.451209 | 3.2:+54839140 | None:intergenic |
| GTTGTGGGAGGTGGTCCTAC+TGG | 0.453707 | 3.2:-54839448 | MS.gene03971:CDS |
| AATAGGTTGGGAACTGAAAT+GGG | 0.459250 | 3.2:+54840936 | None:intergenic |
| TCACTTACTTGGGCCAATGC+TGG | 0.460907 | 3.2:+54838527 | None:intergenic |
| CCGAGATGCTTGTAAACAAA+AGG | 0.470233 | 3.2:+54838271 | None:intergenic |
| CCTGCTATTTCTAGGGAACC+TGG | 0.471716 | 3.2:-54840658 | MS.gene03971:CDS |
| TGAGTGGCTTCGTGTTCCTT+CGG | 0.474068 | 3.2:-54838615 | MS.gene03971:CDS |
| AAAGAGGTGTAAACACCATA+TGG | 0.476687 | 3.2:+54840746 | None:intergenic |
| GGAAAAGGGTTAGCGCTGGC+GGG | 0.482876 | 3.2:-54838098 | MS.gene03971:CDS |
| ATATTACACGGGTTGTCAGC+TGG | 0.484498 | 3.2:-54838043 | MS.gene03971:CDS |
| AGTGGATTTGTTGAAAGTAC+TGG | 0.494829 | 3.2:-54838563 | MS.gene03971:CDS |
| TTAAACAAAATTGGTAAAGA+AGG | 0.495425 | 3.2:-54838337 | MS.gene03971:CDS |
| TAATCATTAGGCTTAACATA+AGG | 0.495587 | 3.2:+54840904 | None:intergenic |
| TGGTTGTGCTTGGTTCAGGT+TGG | 0.498529 | 3.2:-54840837 | MS.gene03971:CDS |
| CGTATGGTTATGTGCATCAA+TGG | 0.499458 | 3.2:+54840606 | None:intergenic |
| GACCATACCAGCAAACCAAA+TGG | 0.501285 | 3.2:+54838820 | None:intergenic |
| AATTCAACCTGCTATTTCTA+GGG | 0.501319 | 3.2:-54840665 | MS.gene03971:CDS |
| CTGGTATGGTCTACTGGCGT+TGG | 0.502336 | 3.2:-54838808 | MS.gene03971:CDS |
| TCAGGAGTTCGTCTTGTTCG+TGG | 0.502386 | 3.2:-54838898 | MS.gene03971:CDS |
| TGCTCATGCAGGAGGGAAAA+GGG | 0.506198 | 3.2:-54838112 | MS.gene03971:intron |
| TTCATAGTCTGCTTATATCA+CGG | 0.508536 | 3.2:+54837970 | None:intergenic |
| GGCTGGATGCAGACTCATGA+AGG | 0.514806 | 3.2:-54840815 | MS.gene03971:CDS |
| GGGAAAAGGGTTAGCGCTGG+CGG | 0.515670 | 3.2:-54838099 | MS.gene03971:CDS |
| TTGGACCTCCCAAAAGCTCC+TGG | 0.516708 | 3.2:-54838763 | MS.gene03971:CDS |
| GACTGTAACTGATGGAGAGC+AGG | 0.521164 | 3.2:-54840020 | MS.gene03971:CDS |
| GTAAACACCATATGGTTCCT+AGG | 0.522344 | 3.2:+54840754 | None:intergenic |
| CAGAAGATTATCCTAAATGA+TGG | 0.528034 | 3.2:-54838853 | MS.gene03971:CDS |
| TGGGCCAATGCTGGAAGTGT+TGG | 0.528759 | 3.2:+54838536 | None:intergenic |
| TGTCTCACCTAGGAACCATA+TGG | 0.529363 | 3.2:-54840761 | MS.gene03971:CDS |
| ACCACTCTTGGTTTCTCATG+AGG | 0.542964 | 3.2:+54840856 | None:intergenic |
| GGCAACTATTGGCAGATACA+AGG | 0.545899 | 3.2:-54838242 | MS.gene03971:CDS |
| AAGACCAACACTTCCAGCAT+TGG | 0.547283 | 3.2:-54838540 | MS.gene03971:CDS |
| TCCCAAAAGCTCCTGGTGGA+AGG | 0.560517 | 3.2:-54838756 | MS.gene03971:intron |
| TATGAGACTGTAAACTTCCA+AGG | 0.564634 | 3.2:+54839989 | None:intergenic |
| ACTTAGCGACTTTATCATGA+AGG | 0.565338 | 3.2:-54839407 | MS.gene03971:CDS |
| TGGGAGAGAAAAGTGAAAGA+TGG | 0.565464 | 3.2:+54840955 | None:intergenic |
| TAACTAGAACTAGCATGGCT+TGG | 0.565554 | 3.2:-54841059 | None:intergenic |
| AAAATTGGTAAAGAAGGTGC+AGG | 0.572259 | 3.2:-54838331 | MS.gene03971:CDS |
| AAACCAAGAGTGGTTGTGCT+TGG | 0.573517 | 3.2:-54840847 | MS.gene03971:CDS |
| TCCGACGAATTTCCTGTGCA+TGG | 0.573606 | 3.2:+54839876 | None:intergenic |
| TTTGTTGGTTCCAAACCTGA+AGG | 0.573663 | 3.2:+54840880 | None:intergenic |
| AGTGCAAAAGAAATAGAACT+TGG | 0.578815 | 3.2:-54838298 | MS.gene03971:CDS |
| CCAGGTTCCCTAGAAATAGC+AGG | 0.578825 | 3.2:+54840658 | None:intergenic |
| TGTCGATCTTAGACAAAGCA+AGG | 0.585459 | 3.2:-54838215 | MS.gene03971:intron |
| TTGCATTGTGTTGTTGTGGG+AGG | 0.585792 | 3.2:-54839460 | MS.gene03971:CDS |
| GAGAGCAGGCAATAGAACCT+TGG | 0.587420 | 3.2:-54840006 | MS.gene03971:CDS |
| ACAGGATTGGTGTTGATGAG+TGG | 0.587559 | 3.2:-54838631 | MS.gene03971:intron |
| GGCGCTCGGCGTATATTACA+CGG | 0.589489 | 3.2:-54838055 | MS.gene03971:CDS |
| GGATACAGGAATTTCTGAAG+AGG | 0.590149 | 3.2:-54839497 | MS.gene03971:intron |
| CACTGTGAGACTGTAACTGA+TGG | 0.590761 | 3.2:-54840028 | MS.gene03971:CDS |
| AAAGATTGAATAATTGGTGA+CGG | 0.592765 | 3.2:+54838784 | None:intergenic |
| GGAGGGAAAAGGGTTAGCGC+TGG | 0.592835 | 3.2:-54838102 | MS.gene03971:CDS |
| CATTGATGCACATAACCATA+CGG | 0.599716 | 3.2:-54840605 | MS.gene03971:intron |
| ACACAAGTAGAAGCCAAAAG+AGG | 0.602639 | 3.2:+54840730 | None:intergenic |
| CCACTGAATTCAACTCCAGT+AGG | 0.611047 | 3.2:+54839433 | None:intergenic |
| CCAAAGATATACTCATGTGA+AGG | 0.613990 | 3.2:-54839377 | MS.gene03971:CDS |
| ACATTGTTTGTGTCTCACCT+AGG | 0.614839 | 3.2:-54840771 | MS.gene03971:CDS |
| TATCCGCGTTACTTTAATCG+AGG | 0.616092 | 3.2:-54839350 | MS.gene03971:intron |
| GAGAACACATCTTGTACCGA+AGG | 0.617580 | 3.2:+54838599 | None:intergenic |
| TCGCGAAGTACACCATGCAC+AGG | 0.617659 | 3.2:-54839888 | MS.gene03971:CDS |
| ACCATGCACAGGAAATTCGT+CGG | 0.623537 | 3.2:-54839877 | MS.gene03971:CDS |
| TTTCTGAAGAGGAGAAACAA+AGG | 0.629794 | 3.2:-54839486 | MS.gene03971:CDS |
| GCTGGATGCAGACTCATGAA+GGG | 0.635509 | 3.2:-54840814 | MS.gene03971:CDS |
| TTACAAGCATCTCGGCAGCA+TGG | 0.640886 | 3.2:-54838263 | MS.gene03971:CDS |
| TCACAGGTGGCAGAGAGACA+AGG | 0.641933 | 3.2:-54838379 | MS.gene03971:intron |
| GACCTCCCAAAAGCTCCTGG+TGG | 0.643228 | 3.2:-54838760 | MS.gene03971:CDS |
| GCGCTCGGCGTATATTACAC+GGG | 0.651298 | 3.2:-54838054 | MS.gene03971:CDS |
| GATAAGCTAGTAATTGCACT+AGG | 0.653602 | 3.2:-54839965 | MS.gene03971:CDS |
| TGCTACCAAACAGTTGACAA+AGG | 0.656410 | 3.2:-54839145 | MS.gene03971:intron |
| GCCTCATGAGAAACCAAGAG+TGG | 0.663315 | 3.2:-54840857 | MS.gene03971:CDS |
| TATCCTAAATGATGGTACTG+AGG | 0.675178 | 3.2:-54838845 | MS.gene03971:CDS |
| GCAAGAAAGAAATAAGAACC+AGG | 0.675683 | 3.2:+54840640 | None:intergenic |
| TATGAGACTAACCTTCCACC+AGG | 0.679101 | 3.2:+54838745 | None:intergenic |
| TGGTAGCATAGAGCCTGAGT+CGG | 0.687444 | 3.2:+54839160 | None:intergenic |
| TTCTCAATAGGTGACTGCAG+TGG | 0.690005 | 3.2:-54838581 | MS.gene03971:CDS |
| CCTACTGGAGTTGAATTCAG+TGG | 0.698386 | 3.2:-54839433 | MS.gene03971:CDS |
| TTACACGGGTTGTCAGCTGG+AGG | 0.709924 | 3.2:-54838040 | MS.gene03971:CDS |
| ATACCTCGATTAAAGTAACG+CGG | 0.761720 | 3.2:+54839347 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATTTACTAACAAAAAAA+GGG | + | chr3.2:54839734-54839753 | None:intergenic | 15.0% |
| !! | TGGAAAATATAAAACTAATA+TGG | + | chr3.2:54840079-54840098 | None:intergenic | 15.0% |
| !!! | ATATTTTCTCAAATTATTAC+TGG | + | chr3.2:54838641-54838660 | None:intergenic | 15.0% |
| !!! | GAGTTTTTAGTTTTTTTATT+TGG | - | chr3.2:54840940-54840959 | MS.gene03971:CDS | 15.0% |
| !! | AGGAAAAAAAAATCATATCA+AGG | + | chr3.2:54838454-54838473 | None:intergenic | 20.0% |
| !! | ATTAACTTAGAAGATATCTT+TGG | + | chr3.2:54839771-54839790 | None:intergenic | 20.0% |
| !! | GAAAATTTGTATTTGATGTT+TGG | - | chr3.2:54838954-54838973 | MS.gene03971:intron | 20.0% |
| !! | GGTAATTTACTAACAAAAAA+AGG | + | chr3.2:54839735-54839754 | None:intergenic | 20.0% |
| !! | TTAAACAAAATTGGTAAAGA+AGG | - | chr3.2:54840679-54840698 | MS.gene03971:CDS | 20.0% |
| !! | TTGAATCTAATTACTTGTAT+TGG | - | chr3.2:54838666-54838685 | MS.gene03971:intron | 20.0% |
| !!! | TCTATTTGAATTGACTTATT+TGG | + | chr3.2:54839421-54839440 | None:intergenic | 20.0% |
| ! | AAAGATTGAATAATTGGTGA+CGG | + | chr3.2:54840235-54840254 | None:intergenic | 25.0% |
| ! | ACTGAGATAAACTACAATAT+TGG | + | chr3.2:54840099-54840118 | None:intergenic | 25.0% |
| ! | ACTTCAAATATCACTTACTT+GGG | + | chr3.2:54840502-54840521 | None:intergenic | 25.0% |
| ! | AGATGATGATTTAATGTTGT+TGG | + | chr3.2:54838005-54838024 | None:intergenic | 25.0% |
| ! | AGTTCAAATTCCAAAAAGAA+TGG | + | chr3.2:54838843-54838862 | None:intergenic | 25.0% |
| ! | ATAAAGTTGCAGATGATTTA+TGG | - | chr3.2:54840291-54840310 | MS.gene03971:intron | 25.0% |
| ! | GATTCTATGTATTTATCAAC+TGG | - | chr3.2:54841003-54841022 | MS.gene03971:CDS | 25.0% |
| ! | GTTCAAATTCCAAAAAGAAT+GGG | + | chr3.2:54838842-54838861 | None:intergenic | 25.0% |
| ! | TAATAGGACATGAACAAAAT+TGG | + | chr3.2:54839806-54839825 | None:intergenic | 25.0% |
| ! | TAATATCTCATTTGCCTAAT+AGG | + | chr3.2:54839822-54839841 | None:intergenic | 25.0% |
| ! | TAATCATTAGGCTTAACATA+AGG | + | chr3.2:54838115-54838134 | None:intergenic | 25.0% |
| ! | TACTTCAAATATCACTTACT+TGG | + | chr3.2:54840503-54840522 | None:intergenic | 25.0% |
| ! | TATTAGTATCTGAATTGACA+AGG | - | chr3.2:54840036-54840055 | MS.gene03971:intron | 25.0% |
| ! | TGGATTACAACTCTTATATT+CGG | - | chr3.2:54841023-54841042 | MS.gene03971:CDS | 25.0% |
| !! | AATTTTGTTCATGTCCTATT+AGG | - | chr3.2:54839805-54839824 | MS.gene03971:intron | 25.0% |
| !!! | AAAAATGGATCAGTTTTGTT+TGG | + | chr3.2:54838034-54838053 | None:intergenic | 25.0% |
| !!! | ATCACTTCTGTGTTTTATTT+TGG | - | chr3.2:54839498-54839517 | MS.gene03971:intron | 25.0% |
| !!! | TATTTGATGTTTGGTTTTGA+AGG | - | chr3.2:54838963-54838982 | MS.gene03971:intron | 25.0% |
| !!! | TTTTCCAGAAAGTTTGTTTT+TGG | - | chr3.2:54840595-54840614 | MS.gene03971:intron | 25.0% |
| AAACCTGAAGGATAATCATT+AGG | + | chr3.2:54838127-54838146 | None:intergenic | 30.0% | |
| AAAGATGGTAAGAGGAAAAA+TGG | + | chr3.2:54838049-54838068 | None:intergenic | 30.0% | |
| AACAAAATACGATGAAGGAA+AGG | + | chr3.2:54838565-54838584 | None:intergenic | 30.0% | |
| AACATACTCTCCATAACTTA+AGG | + | chr3.2:54838795-54838814 | None:intergenic | 30.0% | |
| ACATTTAATAACACACCGTA+TGG | + | chr3.2:54838429-54838448 | None:intergenic | 30.0% | |
| AGATGAACAAAATACGATGA+AGG | + | chr3.2:54838570-54838589 | None:intergenic | 30.0% | |
| AGGTCCAAAGATTGAATAAT+TGG | + | chr3.2:54840241-54840260 | None:intergenic | 30.0% | |
| AGTGCAAAAGAAATAGAACT+TGG | - | chr3.2:54840718-54840737 | MS.gene03971:CDS | 30.0% | |
| ATCTTTGGCATGAACAAAAA+TGG | + | chr3.2:54839756-54839775 | None:intergenic | 30.0% | |
| CAGAAGATTATCCTAAATGA+TGG | - | chr3.2:54840163-54840182 | MS.gene03971:intron | 30.0% | |
| CATCAGATAGCATCAAATTT+AGG | + | chr3.2:54839173-54839192 | None:intergenic | 30.0% | |
| GAACATTGTATACAAGTACT+AGG | + | chr3.2:54838474-54838493 | None:intergenic | 30.0% | |
| GCAAGTGTGTTAAACAAAAT+TGG | - | chr3.2:54840670-54840689 | MS.gene03971:CDS | 30.0% | |
| GTCACCAATTATTCAATCTT+TGG | - | chr3.2:54840234-54840253 | MS.gene03971:intron | 30.0% | |
| TATTGTAGTTTATCTCAGTC+AGG | - | chr3.2:54840100-54840119 | MS.gene03971:intron | 30.0% | |
| TTAAGTCGTTTATCCAAACA+TGG | + | chr3.2:54839222-54839241 | None:intergenic | 30.0% | |
| ! | ACTAATTTGTGTTGGAATGT+TGG | - | chr3.2:54838909-54838928 | MS.gene03971:intron | 30.0% |
| ! | CATTTTTGTCCCATTCTTTT+TGG | - | chr3.2:54838830-54838849 | MS.gene03971:CDS | 30.0% |
| ! | TAATGATTATCCTTCAGGTT+TGG | - | chr3.2:54838126-54838145 | MS.gene03971:intron | 30.0% |
| ! | TGTGTGATACTAATTTGTGT+TGG | - | chr3.2:54838901-54838920 | MS.gene03971:CDS | 30.0% |
| ! | TGTTGTTGGAAAATTTTGAG+AGG | + | chr3.2:54837991-54838010 | None:intergenic | 30.0% |
| ! | TTTTTGGATGCATTACCATT+TGG | - | chr3.2:54840611-54840630 | MS.gene03971:CDS | 30.0% |
| !! | AATTCAACCTGCTATTTCTA+GGG | - | chr3.2:54838351-54838370 | MS.gene03971:CDS | 30.0% |
| !! | TAAGATGTTTTAAGCTTTCC+TGG | - | chr3.2:54839347-54839366 | MS.gene03971:intron | 30.0% |
| !!! | ACTGAATGTTATTTTCTCAC+AGG | - | chr3.2:54840367-54840386 | MS.gene03971:intron | 30.0% |
| !!! | ATGTTATTTTCTCACAGGAT+TGG | - | chr3.2:54840372-54840391 | MS.gene03971:intron | 30.0% |
| !!! | CTGTGTTTTATTTTGGATAC+AGG | - | chr3.2:54839505-54839524 | MS.gene03971:intron | 30.0% |
| !!! | TAGTTTTTTTATTTGGCGCT+CGG | - | chr3.2:54840947-54840966 | MS.gene03971:CDS | 30.0% |
| AACATCTTAGATTACCTCTC+CGG | + | chr3.2:54839336-54839355 | None:intergenic | 35.0% | |
| AAGCCTAATGATTATCCTTC+AGG | - | chr3.2:54838121-54838140 | MS.gene03971:intron | 35.0% | |
| ACACCTTCAATATTCAGTGT+CGG | - | chr3.2:54838726-54838745 | MS.gene03971:intron | 35.0% | |
| ACTTAGCGACTTTATCATGA+AGG | - | chr3.2:54839609-54839628 | MS.gene03971:intron | 35.0% | |
| ATACCTCGATTAAAGTAACG+CGG | + | chr3.2:54839672-54839691 | None:intergenic | 35.0% | |
| CATTACCATTTGGATTTCAC+AGG | - | chr3.2:54840621-54840640 | MS.gene03971:CDS | 35.0% | |
| CATTGATGCACATAACCATA+CGG | - | chr3.2:54838411-54838430 | MS.gene03971:intron | 35.0% | |
| CCAAAGATATACTCATGTGA+AGG | - | chr3.2:54839639-54839658 | MS.gene03971:intron | 35.0% | |
| CCTTCACATGAGTATATCTT+TGG | + | chr3.2:54839642-54839661 | None:intergenic | 35.0% | |
| CCTTGAATTCCAAAAGTAGA+AGG | + | chr3.2:54839084-54839103 | None:intergenic | 35.0% | |
| GAAAAGTGAAAGATGGTAAG+AGG | + | chr3.2:54838057-54838076 | None:intergenic | 35.0% | |
| GATAAGCTAGTAATTGCACT+AGG | - | chr3.2:54839051-54839070 | MS.gene03971:intron | 35.0% | |
| GCAAGAAAGAAATAAGAACC+AGG | + | chr3.2:54838379-54838398 | None:intergenic | 35.0% | |
| GCACTACTAAAGAGTCTATT+TGG | + | chr3.2:54840562-54840581 | None:intergenic | 35.0% | |
| GCATCCAAAAACAAACTTTC+TGG | + | chr3.2:54840602-54840621 | None:intergenic | 35.0% | |
| GGTAAGCTATATCTTGATAG+AGG | - | chr3.2:54839892-54839911 | MS.gene03971:CDS | 35.0% | |
| GTACAAGATGTGTTCTCAAT+AGG | - | chr3.2:54840423-54840442 | MS.gene03971:intron | 35.0% | |
| TATCCTAAATGATGGTACTG+AGG | - | chr3.2:54840171-54840190 | MS.gene03971:intron | 35.0% | |
| TATGAGACTGTAAACTTCCA+AGG | + | chr3.2:54839030-54839049 | None:intergenic | 35.0% | |
| TTGGATTATGTACTAGCTCA+TGG | + | chr3.2:54839402-54839421 | None:intergenic | 35.0% | |
| ! | AAAATTGGTAAAGAAGGTGC+AGG | - | chr3.2:54840685-54840704 | MS.gene03971:CDS | 35.0% |
| ! | AAAGAGGTGTAAACACCATA+TGG | + | chr3.2:54838273-54838292 | None:intergenic | 35.0% |
| ! | AATAGGTTGGGAACTGAAAT+GGG | + | chr3.2:54838083-54838102 | None:intergenic | 35.0% |
| ! | ACATAAGGCTTTTCCTCAAT+AGG | + | chr3.2:54838100-54838119 | None:intergenic | 35.0% |
| ! | ATAGACTCGTAGTCTTAGTT+AGG | - | chr3.2:54839436-54839455 | MS.gene03971:CDS | 35.0% |
| ! | TATGGTGTTTACACCTCTTT+TGG | - | chr3.2:54838273-54838292 | MS.gene03971:CDS | 35.0% |
| ! | TTTCTGAAGAGGAGAAACAA+AGG | - | chr3.2:54839530-54839549 | MS.gene03971:intron | 35.0% |
| !! | AGTGGATTTGTTGAAAGTAC+TGG | - | chr3.2:54840453-54840472 | MS.gene03971:intron | 35.0% |
| !! | CCTTTTGTTTACAAGCATCT+CGG | - | chr3.2:54840745-54840764 | MS.gene03971:CDS | 35.0% |
| !! | CTGAATATTGAAGGTGTTTC+CGG | + | chr3.2:54838723-54838742 | None:intergenic | 35.0% |
| !! | CTTTTGCATTGTGTTGTTGT+GGG | - | chr3.2:54839553-54839572 | MS.gene03971:intron | 35.0% |
| !! | GAATTCAACCTGCTATTTCT+AGG | - | chr3.2:54838350-54838369 | MS.gene03971:CDS | 35.0% |
| !! | GATAGAGGCATTTCTTCATT+TGG | - | chr3.2:54839907-54839926 | MS.gene03971:CDS | 35.0% |
| !!! | CCTTCTACTTTTGGAATTCA+AGG | - | chr3.2:54839081-54839100 | MS.gene03971:intron | 35.0% |
| ACACAAGTAGAAGCCAAAAG+AGG | + | chr3.2:54838289-54838308 | None:intergenic | 40.0% | |
| ACATCTTAGATTACCTCTCC+GGG | + | chr3.2:54839335-54839354 | None:intergenic | 40.0% | |
| ACATTGTTTGTGTCTCACCT+AGG | - | chr3.2:54838245-54838264 | MS.gene03971:CDS | 40.0% | |
| AGATCAGTTGCTGAACCTAT+TGG | - | chr3.2:54838325-54838344 | MS.gene03971:CDS | 40.0% | |
| CAGCTTATGACATGTCCATA+AGG | + | chr3.2:54839376-54839395 | None:intergenic | 40.0% | |
| CATCTTTCATGAGCTACTTC+TGG | - | chr3.2:54840836-54840855 | MS.gene03971:CDS | 40.0% | |
| CCGAGATGCTTGTAAACAAA+AGG | + | chr3.2:54840748-54840767 | None:intergenic | 40.0% | |
| CGTATGGTTATGTGCATCAA+TGG | + | chr3.2:54838413-54838432 | None:intergenic | 40.0% | |
| CTAGAACATTGTAGCAAACC+TGG | + | chr3.2:54839198-54839217 | None:intergenic | 40.0% | |
| GAACCTCAGTACCATCATTT+AGG | + | chr3.2:54840177-54840196 | None:intergenic | 40.0% | |
| GCTTACCTTTGTCAACTGTT+TGG | + | chr3.2:54839879-54839898 | None:intergenic | 40.0% | |
| GTAAACACCATATGGTTCCT+AGG | + | chr3.2:54838265-54838284 | None:intergenic | 40.0% | |
| GTGTACTTCGCGAAGAAAAA+TGG | + | chr3.2:54839121-54839140 | None:intergenic | 40.0% | |
| TACCATTTGGATTTCACAGG+TGG | - | chr3.2:54840624-54840643 | MS.gene03971:CDS | 40.0% | |
| TGCATCAATGGCAGTACAAT+TGG | + | chr3.2:54838401-54838420 | None:intergenic | 40.0% | |
| TGCTACCAAACAGTTGACAA+AGG | - | chr3.2:54839871-54839890 | MS.gene03971:CDS | 40.0% | |
| TGGGAGAGAAAAGTGAAAGA+TGG | + | chr3.2:54838064-54838083 | None:intergenic | 40.0% | |
| TGTCGATCTTAGACAAAGCA+AGG | - | chr3.2:54840801-54840820 | MS.gene03971:CDS | 40.0% | |
| TTGATGCTATCTGATGTTCC+AGG | - | chr3.2:54839177-54839196 | MS.gene03971:CDS | 40.0% | |
| TTTCAGTTCCCAACCTATTG+AGG | - | chr3.2:54838084-54838103 | MS.gene03971:CDS | 40.0% | |
| ! | AAGGCTTTTCCTCAATAGGT+TGG | + | chr3.2:54838096-54838115 | None:intergenic | 40.0% |
| ! | ACAATGTTCTAGGCCATGTT+TGG | - | chr3.2:54839206-54839225 | MS.gene03971:intron | 40.0% |
| ! | AGGCTTTTCCTCAATAGGTT+GGG | + | chr3.2:54838095-54838114 | None:intergenic | 40.0% |
| ! | CAATAGGTTGGGAACTGAAA+TGG | + | chr3.2:54838084-54838103 | None:intergenic | 40.0% |
| ! | GCAGGTTGAATTCTTCCAAT+AGG | + | chr3.2:54838343-54838362 | None:intergenic | 40.0% |
| ! | GGATACAGGAATTTCTGAAG+AGG | - | chr3.2:54839519-54839538 | MS.gene03971:intron | 40.0% |
| ! | GGATCACATCCTTCTACTTT+TGG | - | chr3.2:54839072-54839091 | MS.gene03971:intron | 40.0% |
| ! | TATCCGCGTTACTTTAATCG+AGG | - | chr3.2:54839666-54839685 | MS.gene03971:intron | 40.0% |
| !! | CAGGTTTGCTACAATGTTCT+AGG | - | chr3.2:54839196-54839215 | MS.gene03971:intron | 40.0% |
| !! | GCTGTTTTCATAAGCTATCC+CGG | - | chr3.2:54839314-54839333 | MS.gene03971:intron | 40.0% |
| !! | GCTTTTGCATTGTGTTGTTG+TGG | - | chr3.2:54839552-54839571 | MS.gene03971:intron | 40.0% |
| !! | TACTTGTATTGGTGTCGTGT+CGG | - | chr3.2:54838677-54838696 | MS.gene03971:intron | 40.0% |
| !! | TTCCATTTGGTTTGCTGGTA+TGG | - | chr3.2:54840194-54840213 | MS.gene03971:intron | 40.0% |
| !! | TTTGTTGGTTCCAAACCTGA+AGG | + | chr3.2:54838139-54838158 | None:intergenic | 40.0% |
| !!! | CTTTTGGCTTCTACTTGTGT+CGG | - | chr3.2:54838289-54838308 | MS.gene03971:CDS | 40.0% |
| AAACCAAGAGTGGTTGTGCT+TGG | - | chr3.2:54838169-54838188 | MS.gene03971:intron | 45.0% | |
| AAGACCAACACTTCCAGCAT+TGG | - | chr3.2:54840476-54840495 | MS.gene03971:intron | 45.0% | |
| AAGCTTTCCTGGAGACCTTA+TGG | - | chr3.2:54839358-54839377 | MS.gene03971:CDS | 45.0% | |
| ACCACTCTTGGTTTCTCATG+AGG | + | chr3.2:54838163-54838182 | None:intergenic | 45.0% | |
| ACCATGCACAGGAAATTCGT+CGG | - | chr3.2:54839139-54839158 | MS.gene03971:intron | 45.0% | |
| ATGAAACACTGACACGGCAA+TGG | - | chr3.2:54838605-54838624 | MS.gene03971:CDS | 45.0% | |
| ATGCAGACTCATGAAGGGTT+TGG | - | chr3.2:54838207-54838226 | MS.gene03971:intron | 45.0% | |
| CACTGTGAGACTGTAACTGA+TGG | - | chr3.2:54838988-54839007 | MS.gene03971:intron | 45.0% | |
| CCACTGAATTCAACTCCAGT+AGG | + | chr3.2:54839586-54839605 | None:intergenic | 45.0% | |
| CCTACTGGAGTTGAATTCAG+TGG | - | chr3.2:54839583-54839602 | MS.gene03971:intron | 45.0% | |
| CGACCTATGAAACACTGACA+CGG | - | chr3.2:54838599-54838618 | MS.gene03971:CDS | 45.0% | |
| GACCATACCAGCAAACCAAA+TGG | + | chr3.2:54840199-54840218 | None:intergenic | 45.0% | |
| GAGAACACATCTTGTACCGA+AGG | + | chr3.2:54840420-54840439 | None:intergenic | 45.0% | |
| GGCAACTATTGGCAGATACA+AGG | - | chr3.2:54840774-54840793 | MS.gene03971:CDS | 45.0% | |
| TACCTGCAGTGTGGCTTATA+TGG | - | chr3.2:54838932-54838951 | MS.gene03971:intron | 45.0% | |
| TACTGACATGTGTCAGAGAC+CGG | - | chr3.2:54838701-54838720 | MS.gene03971:intron | 45.0% | |
| TATGAGACTAACCTTCCACC+AGG | + | chr3.2:54840274-54840293 | None:intergenic | 45.0% | |
| TCCACACTCAACACTCATAG+TGG | + | chr3.2:54838769-54838788 | None:intergenic | 45.0% | |
| TGCCACCTGTGAAATCCAAA+TGG | + | chr3.2:54840629-54840648 | None:intergenic | 45.0% | |
| TGTCTCACCTAGGAACCATA+TGG | - | chr3.2:54838255-54838274 | MS.gene03971:CDS | 45.0% | |
| TTCCATATAAGCCACACTGC+AGG | + | chr3.2:54838937-54838956 | None:intergenic | 45.0% | |
| TTCTCAATAGGTGACTGCAG+TGG | - | chr3.2:54840435-54840454 | MS.gene03971:intron | 45.0% | |
| TTGCCGTGTCAGTGTTTCAT+AGG | + | chr3.2:54838605-54838624 | None:intergenic | 45.0% | |
| TTTCATAAGCTATCCCGGAG+AGG | - | chr3.2:54839319-54839338 | MS.gene03971:intron | 45.0% | |
| ! | ATATTACACGGGTTGTCAGC+TGG | - | chr3.2:54840973-54840992 | MS.gene03971:CDS | 45.0% |
| ! | GATGGTACTGAGGTTCCATT+TGG | - | chr3.2:54840181-54840200 | MS.gene03971:intron | 45.0% |
| ! | GCACCGACACTGAATATTGA+AGG | + | chr3.2:54838732-54838751 | None:intergenic | 45.0% |
| ! | GGTTTCTCATGAGGCTTTGT+TGG | + | chr3.2:54838154-54838173 | None:intergenic | 45.0% |
| ! | GTGTGGACTGCCTTAAGTTA+TGG | - | chr3.2:54838782-54838801 | MS.gene03971:CDS | 45.0% |
| ! | TTGCATTGTGTTGTTGTGGG+AGG | - | chr3.2:54839556-54839575 | MS.gene03971:intron | 45.0% |
| !! | ACAGGATTGGTGTTGATGAG+TGG | - | chr3.2:54840385-54840404 | MS.gene03971:intron | 45.0% |
| !! | ACCACTATGAGTGTTGAGTG+TGG | - | chr3.2:54838765-54838784 | MS.gene03971:CDS | 45.0% |
| !! | CTTCTTTTGATGACCGACTC+AGG | - | chr3.2:54839843-54839862 | MS.gene03971:CDS | 45.0% |
| !! | TGAGGTTCCATTTGGTTTGC+TGG | - | chr3.2:54840189-54840208 | MS.gene03971:intron | 45.0% |
| AGAGTGGTTGTGCTTGGTTC+AGG | - | chr3.2:54838175-54838194 | MS.gene03971:intron | 50.0% | |
| ATGCTCATGCAGGAGGGAAA+AGG | - | chr3.2:54840903-54840922 | MS.gene03971:CDS | 50.0% | |
| CCAGGTTCCCTAGAAATAGC+AGG | + | chr3.2:54838361-54838380 | None:intergenic | 50.0% | |
| CTTACCAACCATGCTCATGC+AGG | - | chr3.2:54840893-54840912 | MS.gene03971:CDS | 50.0% | |
| GAACCAAGCACAACCACTCT+TGG | + | chr3.2:54838175-54838194 | None:intergenic | 50.0% | |
| GAATGTTGGTACCTGCAGTG+TGG | - | chr3.2:54838923-54838942 | MS.gene03971:intron | 50.0% | |
| GACATGTCCATAAGGTCTCC+AGG | + | chr3.2:54839368-54839387 | None:intergenic | 50.0% | |
| GACTGTAACTGATGGAGAGC+AGG | - | chr3.2:54838996-54839015 | MS.gene03971:intron | 50.0% | |
| GAGAGCAGGCAATAGAACCT+TGG | - | chr3.2:54839010-54839029 | MS.gene03971:intron | 50.0% | |
| GCCTCATGAGAAACCAAGAG+TGG | - | chr3.2:54838159-54838178 | MS.gene03971:intron | 50.0% | |
| GCTGGATGCAGACTCATGAA+GGG | - | chr3.2:54838202-54838221 | MS.gene03971:intron | 50.0% | |
| TCACTTACTTGGGCCAATGC+TGG | + | chr3.2:54840492-54840511 | None:intergenic | 50.0% | |
| TCCGACGAATTTCCTGTGCA+TGG | + | chr3.2:54839143-54839162 | None:intergenic | 50.0% | |
| TGAGTGGCTTCGTGTTCCTT+CGG | - | chr3.2:54840401-54840420 | MS.gene03971:intron | 50.0% | |
| TGCTCATGCAGGAGGGAAAA+GGG | - | chr3.2:54840904-54840923 | MS.gene03971:CDS | 50.0% | |
| TGGTAGCATAGAGCCTGAGT+CGG | + | chr3.2:54839859-54839878 | None:intergenic | 50.0% | |
| TGGTTGTGCTTGGTTCAGGT+TGG | - | chr3.2:54838179-54838198 | MS.gene03971:intron | 50.0% | |
| TTACAAGCATCTCGGCAGCA+TGG | - | chr3.2:54840753-54840772 | MS.gene03971:CDS | 50.0% | |
| ! | AACCTTCCACCAGGAGCTTT+TGG | + | chr3.2:54840265-54840284 | None:intergenic | 50.0% |
| ! | ACCTTCCACCAGGAGCTTTT+GGG | + | chr3.2:54840264-54840283 | None:intergenic | 50.0% |
| ! | CATTGTGTTGTTGTGGGAGG+TGG | - | chr3.2:54839559-54839578 | MS.gene03971:intron | 50.0% |
| ! | CTGCATGAGCATGGTTGGTA+AGG | + | chr3.2:54840895-54840914 | None:intergenic | 50.0% |
| ! | GGTTGTGCTTGGTTCAGGTT+GGG | - | chr3.2:54838180-54838199 | MS.gene03971:intron | 50.0% |
| ! | TCAGGAGTTCGTCTTGTTCG+TGG | - | chr3.2:54840118-54840137 | MS.gene03971:intron | 50.0% |
| ! | TTTTCCCTCCTGCATGAGCA+TGG | + | chr3.2:54840904-54840923 | None:intergenic | 50.0% |
| !! | CCTGCTATTTCTAGGGAACC+TGG | - | chr3.2:54838358-54838377 | MS.gene03971:CDS | 50.0% |
| !! | GGTTTGCTGGTATGGTCTAC+TGG | - | chr3.2:54840202-54840221 | MS.gene03971:intron | 50.0% |
| ACCAACCATGCTCATGCAGG+AGG | - | chr3.2:54840896-54840915 | MS.gene03971:CDS | 55.0% | |
| CCAACCATGCTCATGCAGGA+GGG | - | chr3.2:54840897-54840916 | MS.gene03971:CDS | 55.0% | |
| CTCGGCAGCATGGCAACTAT+TGG | - | chr3.2:54840763-54840782 | MS.gene03971:CDS | 55.0% | |
| CTGGTATGGTCTACTGGCGT+TGG | - | chr3.2:54840208-54840227 | MS.gene03971:intron | 55.0% | |
| GCGCTCGGCGTATATTACAC+GGG | - | chr3.2:54840962-54840981 | MS.gene03971:CDS | 55.0% | |
| GGCGCTCGGCGTATATTACA+CGG | - | chr3.2:54840961-54840980 | MS.gene03971:CDS | 55.0% | |
| GGCTGGATGCAGACTCATGA+AGG | - | chr3.2:54838201-54838220 | MS.gene03971:intron | 55.0% | |
| TCACAGGTGGCAGAGAGACA+AGG | - | chr3.2:54840637-54840656 | MS.gene03971:CDS | 55.0% | |
| TCCCAAAAGCTCCTGGTGGA+AGG | - | chr3.2:54840260-54840279 | MS.gene03971:intron | 55.0% | |
| TCGCGAAGTACACCATGCAC+AGG | - | chr3.2:54839128-54839147 | MS.gene03971:intron | 55.0% | |
| TTGGACCTCCCAAAAGCTCC+TGG | - | chr3.2:54840253-54840272 | MS.gene03971:intron | 55.0% | |
| ! | TGGGCCAATGCTGGAAGTGT+TGG | + | chr3.2:54840483-54840502 | None:intergenic | 55.0% |
| ! | TTACACGGGTTGTCAGCTGG+AGG | - | chr3.2:54840976-54840995 | MS.gene03971:CDS | 55.0% |
| ! | TTCCACCAGGAGCTTTTGGG+AGG | + | chr3.2:54840261-54840280 | None:intergenic | 55.0% |
| CCCTCCTGCATGAGCATGGT+TGG | + | chr3.2:54840900-54840919 | None:intergenic | 60.0% | |
| GACCTCCCAAAAGCTCCTGG+TGG | - | chr3.2:54840256-54840275 | MS.gene03971:intron | 60.0% | |
| GTTGTGGGAGGTGGTCCTAC+TGG | - | chr3.2:54839568-54839587 | MS.gene03971:intron | 60.0% | |
| ! | GGAGGGAAAAGGGTTAGCGC+TGG | - | chr3.2:54840914-54840933 | MS.gene03971:CDS | 60.0% |
| ! | GGGAAAAGGGTTAGCGCTGG+CGG | - | chr3.2:54840917-54840936 | MS.gene03971:CDS | 60.0% |
| !! | GGAAAAGGGTTAGCGCTGGC+GGG | - | chr3.2:54840918-54840937 | MS.gene03971:CDS | 60.0% |
| !! | GTGCTTGGTTCAGGTTGGGC+TGG | - | chr3.2:54838184-54838203 | MS.gene03971:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 54837971 | 54841067 | 54837971 | ID=MS.gene03971 |
| chr3.2 | mRNA | 54837971 | 54841067 | 54837971 | ID=MS.gene03971.t1;Parent=MS.gene03971 |
| chr3.2 | exon | 54840606 | 54841067 | 54840606 | ID=MS.gene03971.t1.exon1;Parent=MS.gene03971.t1 |
| chr3.2 | CDS | 54840606 | 54841067 | 54840606 | ID=cds.MS.gene03971.t1;Parent=MS.gene03971.t1 |
| chr3.2 | exon | 54839840 | 54840053 | 54839840 | ID=MS.gene03971.t1.exon2;Parent=MS.gene03971.t1 |
| chr3.2 | CDS | 54839840 | 54840053 | 54839840 | ID=cds.MS.gene03971.t1;Parent=MS.gene03971.t1 |
| chr3.2 | exon | 54839351 | 54839511 | 54839351 | ID=MS.gene03971.t1.exon3;Parent=MS.gene03971.t1 |
| chr3.2 | CDS | 54839351 | 54839511 | 54839351 | ID=cds.MS.gene03971.t1;Parent=MS.gene03971.t1 |
| chr3.2 | exon | 54839146 | 54839211 | 54839146 | ID=MS.gene03971.t1.exon4;Parent=MS.gene03971.t1 |
| chr3.2 | CDS | 54839146 | 54839211 | 54839146 | ID=cds.MS.gene03971.t1;Parent=MS.gene03971.t1 |
| chr3.2 | exon | 54838757 | 54838920 | 54838757 | ID=MS.gene03971.t1.exon5;Parent=MS.gene03971.t1 |
| chr3.2 | CDS | 54838757 | 54838920 | 54838757 | ID=cds.MS.gene03971.t1;Parent=MS.gene03971.t1 |
| chr3.2 | exon | 54838535 | 54838649 | 54838535 | ID=MS.gene03971.t1.exon6;Parent=MS.gene03971.t1 |
| chr3.2 | CDS | 54838535 | 54838649 | 54838535 | ID=cds.MS.gene03971.t1;Parent=MS.gene03971.t1 |
| chr3.2 | exon | 54838216 | 54838395 | 54838216 | ID=MS.gene03971.t1.exon7;Parent=MS.gene03971.t1 |
| chr3.2 | CDS | 54838216 | 54838395 | 54838216 | ID=cds.MS.gene03971.t1;Parent=MS.gene03971.t1 |
| chr3.2 | exon | 54837971 | 54838123 | 54837971 | ID=MS.gene03971.t1.exon8;Parent=MS.gene03971.t1 |
| chr3.2 | CDS | 54837971 | 54838123 | 54837971 | ID=cds.MS.gene03971.t1;Parent=MS.gene03971.t1 |
| Gene Sequence |
| Protein sequence |
