Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066720.t1 | XP_003608247.1 | 98.6 | 578 | 7 | 1 | 1 | 577 | 1 | 578 | 0.00E+00 | 1151.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066720.t1 | Q94BV7 | 74.4 | 586 | 137 | 5 | 1 | 577 | 1 | 582 | 3.1e-256 | 885.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066720.t1 | Q2HTY1 | 98.6 | 578 | 7 | 1 | 1 | 577 | 1 | 578 | 0.0e+00 | 1151.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene066720 | 0.83235 | 9.94E-56 | -1.69E-46 |
| MS.gene04917 | MS.gene066720 | 0.830268 | 3.23E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene066720 | 0.801468 | 8.88E-49 | -1.69E-46 |
| MS.gene051184 | MS.gene066720 | 0.805113 | 1.56E-49 | -1.69E-46 |
| MS.gene052562 | MS.gene066720 | 0.913614 | 5.02E-84 | -1.69E-46 |
| MS.gene055505 | MS.gene066720 | 0.803607 | 3.22E-49 | -1.69E-46 |
| MS.gene056849 | MS.gene066720 | 0.806267 | 8.94E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene066720 | 0.814956 | 1.18E-51 | -1.69E-46 |
| MS.gene060563 | MS.gene066720 | 0.839448 | 1.57E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069940 | MS.gene066720 | PPI |
| MS.gene066720 | MS.gene57021 | PPI |
| MS.gene01336 | MS.gene066720 | PPI |
| MS.gene03971 | MS.gene066720 | PPI |
| MS.gene048610 | MS.gene066720 | PPI |
| MS.gene02306 | MS.gene066720 | PPI |
| MS.gene052562 | MS.gene066720 | PPI |
| MS.gene066720 | MS.gene53986 | PPI |
| MS.gene009833 | MS.gene066720 | PPI |
| MS.gene066720 | MS.gene91142 | PPI |
| MS.gene002362 | MS.gene066720 | PPI |
| MS.gene32211 | MS.gene066720 | PPI |
| MS.gene066720 | MS.gene33297 | PPI |
| MS.gene048480 | MS.gene066720 | PPI |
| MS.gene064199 | MS.gene066720 | PPI |
| MS.gene046054 | MS.gene066720 | PPI |
| MS.gene88624 | MS.gene066720 | PPI |
| MS.gene01745 | MS.gene066720 | PPI |
| MS.gene50180 | MS.gene066720 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066720.t1 | MTR_4g091240 | 98.616 | 578 | 7 | 1 | 1 | 577 | 1 | 578 | 0.0 | 1184 |
| MS.gene066720.t1 | MTR_2g011730 | 84.083 | 578 | 91 | 1 | 1 | 577 | 1 | 578 | 0.0 | 1019 |
| MS.gene066720.t1 | MTR_4g091240 | 98.918 | 462 | 5 | 0 | 116 | 577 | 13 | 474 | 0.0 | 956 |
| MS.gene066720.t1 | MTR_4g045993 | 68.531 | 572 | 172 | 4 | 6 | 577 | 6 | 569 | 0.0 | 819 |
| MS.gene066720.t1 | MTR_4g045997 | 61.407 | 583 | 213 | 5 | 1 | 577 | 1 | 577 | 0.0 | 755 |
| MS.gene066720.t1 | MTR_4g045997 | 60.791 | 556 | 206 | 5 | 1 | 550 | 1 | 550 | 0.0 | 709 |
| MS.gene066720.t1 | MTR_4g090580 | 38.889 | 360 | 199 | 9 | 50 | 403 | 105 | 449 | 3.92e-71 | 238 |
| MS.gene066720.t1 | MTR_4g090580 | 34.167 | 120 | 70 | 3 | 463 | 577 | 428 | 543 | 3.69e-12 | 69.3 |
| MS.gene066720.t1 | MTR_5g071250 | 41.486 | 323 | 176 | 7 | 50 | 369 | 63 | 375 | 1.07e-63 | 215 |
| MS.gene066720.t1 | MTR_5g071250 | 41.486 | 323 | 176 | 7 | 50 | 369 | 63 | 375 | 3.92e-63 | 216 |
| MS.gene066720.t1 | MTR_5g071250 | 35.833 | 120 | 68 | 2 | 463 | 577 | 386 | 501 | 1.80e-12 | 70.1 |
| MS.gene066720.t1 | MTR_3g464380 | 39.938 | 323 | 181 | 7 | 50 | 369 | 66 | 378 | 8.24e-63 | 215 |
| MS.gene066720.t1 | MTR_3g464380 | 35.537 | 121 | 67 | 4 | 463 | 577 | 389 | 504 | 7.75e-11 | 65.1 |
| MS.gene066720.t1 | MTR_0931s0010 | 27.044 | 318 | 206 | 10 | 76 | 389 | 260 | 555 | 2.08e-23 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066720.t1 | AT4G05020 | 74.403 | 586 | 137 | 5 | 1 | 577 | 1 | 582 | 0.0 | 893 |
| MS.gene066720.t1 | AT4G21490 | 73.242 | 583 | 147 | 4 | 1 | 577 | 1 | 580 | 0.0 | 878 |
| MS.gene066720.t1 | AT4G05020 | 69.984 | 623 | 137 | 6 | 1 | 577 | 1 | 619 | 0.0 | 873 |
| MS.gene066720.t1 | AT4G21490 | 73.242 | 583 | 146 | 5 | 1 | 577 | 1 | 579 | 0.0 | 873 |
| MS.gene066720.t1 | AT2G20800 | 66.044 | 589 | 181 | 5 | 1 | 577 | 1 | 582 | 0.0 | 785 |
| MS.gene066720.t1 | AT4G28220 | 66.794 | 524 | 170 | 2 | 54 | 577 | 52 | 571 | 0.0 | 752 |
| MS.gene066720.t1 | AT4G28220 | 64.114 | 457 | 160 | 2 | 54 | 510 | 52 | 504 | 0.0 | 625 |
| MS.gene066720.t1 | AT2G29990 | 39.815 | 324 | 180 | 8 | 50 | 369 | 70 | 382 | 4.09e-61 | 211 |
| MS.gene066720.t1 | AT2G29990 | 35.000 | 120 | 69 | 3 | 463 | 577 | 393 | 508 | 2.62e-11 | 66.6 |
| MS.gene066720.t1 | AT1G07180 | 40.000 | 325 | 178 | 8 | 50 | 369 | 72 | 384 | 8.53e-61 | 210 |
| MS.gene066720.t1 | AT1G07180 | 38.333 | 120 | 65 | 3 | 463 | 577 | 395 | 510 | 5.39e-14 | 75.1 |
Find 121 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGGTCCTATTAGATTT+AGG | 0.142882 | 4.2:-21011850 | MS.gene066720:CDS |
| TGGATGAGACGCTTTATATT+TGG | 0.179925 | 4.2:-21011197 | MS.gene066720:CDS |
| GGAGAATTGCCATTTCTTAA+AGG | 0.238763 | 4.2:-21013733 | MS.gene066720:intron |
| TTCCATCCGGTTAAAACATT+TGG | 0.311503 | 4.2:+21011889 | None:intergenic |
| TAGAGAAACGTTGGAAGAAT+TGG | 0.312213 | 4.2:+21015231 | None:intergenic |
| ACTTACACTCAAAGAATTTC+AGG | 0.318131 | 4.2:-21012241 | MS.gene066720:CDS |
| AGAAGGTCCTATTAGATTTA+GGG | 0.323652 | 4.2:-21011849 | MS.gene066720:CDS |
| ATGCAGTGGCGGTGGTCTTT+TGG | 0.324109 | 4.2:-21014925 | MS.gene066720:intron |
| GGATGAGACGCTTTATATTT+GGG | 0.330621 | 4.2:-21011196 | MS.gene066720:CDS |
| CCTTCTCCCCTAAATCTAAT+AGG | 0.330735 | 4.2:+21011842 | None:intergenic |
| CTAAATCTAATAGGACCTTC+TGG | 0.336066 | 4.2:+21011851 | None:intergenic |
| TTTAGGTCAATTTGCTCCTC+TGG | 0.342609 | 4.2:-21011493 | MS.gene066720:CDS |
| TCCTCAAGGTACAAGCATTT+AGG | 0.348514 | 4.2:-21011510 | MS.gene066720:intron |
| AAAAGTTTACCTTTAAGAAA+TGG | 0.366458 | 4.2:+21013724 | None:intergenic |
| ATCGGTGCCGGAAAAGAAAA+AGG | 0.369089 | 4.2:-21014874 | MS.gene066720:CDS |
| TCCATGGTTGTGAAAGTATC+TGG | 0.369865 | 4.2:-21013006 | MS.gene066720:CDS |
| CCTGGAGATTGGGTTTCAAT+TGG | 0.380512 | 4.2:-21011444 | MS.gene066720:CDS |
| CTGGCGCACAAGGGCGTTAG+TGG | 0.385603 | 4.2:-21011228 | MS.gene066720:CDS |
| GTCATCGGTTCAAGCCCTTC+AGG | 0.387915 | 4.2:-21011817 | MS.gene066720:intron |
| GATGGTATTGATGTGAAAAC+AGG | 0.394769 | 4.2:-21013030 | MS.gene066720:CDS |
| CTGCACAGCTACCTGGAGAT+TGG | 0.399659 | 4.2:-21011455 | MS.gene066720:CDS |
| TGCACAGCTACCTGGAGATT+GGG | 0.402557 | 4.2:-21011454 | MS.gene066720:CDS |
| AGCAAGTCAGCTGGCGCACA+AGG | 0.404231 | 4.2:-21011238 | MS.gene066720:CDS |
| TGACCTTCCTGAAGATATTA+CGG | 0.408050 | 4.2:+21014685 | None:intergenic |
| GTTAGTGCTGGGAACTGGTT+GGG | 0.424018 | 4.2:-21014850 | MS.gene066720:CDS |
| TTCCATATGGAATGGCTGTC+TGG | 0.426693 | 4.2:-21012933 | MS.gene066720:CDS |
| ATTGTTGGAGGTGGTCCAAC+TGG | 0.442199 | 4.2:-21013411 | MS.gene066720:CDS |
| GGAATGGCTGTCTGGTCAAC+TGG | 0.449853 | 4.2:-21012925 | MS.gene066720:CDS |
| CAATTGGACACAGCAGTCAA+TGG | 0.450596 | 4.2:-21011428 | MS.gene066720:CDS |
| TTTAGTTAAAATCACGCTCC+TGG | 0.452080 | 4.2:-21013316 | MS.gene066720:CDS |
| GCTGTCTGGTCAACTGGTAT+TGG | 0.452937 | 4.2:-21012919 | MS.gene066720:CDS |
| TTAGGTCAATTTGCTCCTCT+GGG | 0.455111 | 4.2:-21011492 | MS.gene066720:CDS |
| ATTTCTTCCTGCTACAGCTC+AGG | 0.463798 | 4.2:-21012040 | MS.gene066720:intron |
| AACCCGTCCGTAATATCTTC+AGG | 0.464325 | 4.2:-21014692 | MS.gene066720:CDS |
| GAAATTACTACAATTCCATA+TGG | 0.465806 | 4.2:-21012946 | MS.gene066720:CDS |
| CAGACAGCTGCACAGCTACC+TGG | 0.466175 | 4.2:-21011462 | MS.gene066720:CDS |
| AAAATCACGCTCCTGGAGGC+TGG | 0.469714 | 4.2:-21013309 | MS.gene066720:CDS |
| GTCAACACATTTAATACTCC+TGG | 0.471749 | 4.2:-21013762 | MS.gene066720:CDS |
| TCTCAATGATCCGCGATATG+AGG | 0.475412 | 4.2:-21014805 | MS.gene066720:CDS |
| TGAACAGCAAGCAAGTCAGC+TGG | 0.476723 | 4.2:-21011247 | MS.gene066720:intron |
| GACCAGACAGCCATTCCATA+TGG | 0.477712 | 4.2:+21012931 | None:intergenic |
| GGGCGTTAGTGGTGTCAGAC+TGG | 0.480699 | 4.2:-21011217 | MS.gene066720:CDS |
| ATTTGGTCAAATTATACCCT+GGG | 0.483128 | 4.2:-21013347 | MS.gene066720:CDS |
| TCCGGTTAAAACATTTGGCC+AGG | 0.485943 | 4.2:+21011894 | None:intergenic |
| GGCTGTTGCTACATCTGAAT+CGG | 0.493043 | 4.2:-21014892 | MS.gene066720:CDS |
| TTCTCCTCTGCACCACCGTA+AGG | 0.501906 | 4.2:-21015172 | MS.gene066720:intron |
| TGCTACATCTGAATCGGTGC+CGG | 0.503421 | 4.2:-21014886 | MS.gene066720:CDS |
| CCTATTAGATTTAGGGGAGA+AGG | 0.510034 | 4.2:-21011842 | MS.gene066720:CDS |
| AGATATGACCTCCAGCCTCC+AGG | 0.510188 | 4.2:+21013298 | None:intergenic |
| GATGAATGGTTGAGAGTTGA+GGG | 0.510295 | 4.2:-21012714 | MS.gene066720:CDS |
| GTGCTGGGAACTGGTTGGGC+AGG | 0.512186 | 4.2:-21014846 | MS.gene066720:CDS |
| GCCAGATACTTTCACAACCA+TGG | 0.514707 | 4.2:+21013005 | None:intergenic |
| ACATGCACCTGAGCTGTAGC+AGG | 0.524127 | 4.2:+21012033 | None:intergenic |
| ACCAAGTGCATACACATTGT+CGG | 0.529575 | 4.2:+21012689 | None:intergenic |
| CACAATGCTGCGAGCCTCAA+CGG | 0.529988 | 4.2:+21014716 | None:intergenic |
| ATCTCAGCAAGGCACCTACC+TGG | 0.530971 | 4.2:-21011912 | MS.gene066720:CDS |
| CAACCATTCATCAGTAGCTA+TGG | 0.531358 | 4.2:+21012725 | None:intergenic |
| GACACAGCAGTCAATGGTTG+TGG | 0.536831 | 4.2:-21011422 | MS.gene066720:CDS |
| GCTGCAAACTCCACTCCAGT+TGG | 0.542620 | 4.2:+21013396 | None:intergenic |
| TACTACAATTCCATATGGAA+TGG | 0.546074 | 4.2:-21012941 | MS.gene066720:CDS |
| GAAGACAAGTTCAAAAGAGA+TGG | 0.546988 | 4.2:-21013048 | MS.gene066720:CDS |
| TTAGGGGAGAAGGGCGTCAT+CGG | 0.550655 | 4.2:-21011832 | MS.gene066720:CDS |
| TGATCTGCTGAAGGAATCCA+AGG | 0.552762 | 4.2:-21012142 | MS.gene066720:CDS |
| CTCTCTTCATCACTCACACT+AGG | 0.557534 | 4.2:+21013456 | None:intergenic |
| ATTTAATACTCCTGGTGTCA+CGG | 0.557915 | 4.2:-21013754 | MS.gene066720:CDS |
| TGTTAGTGCTGGGAACTGGT+TGG | 0.558983 | 4.2:-21014851 | MS.gene066720:CDS |
| GAAGGTCCTATTAGATTTAG+GGG | 0.561054 | 4.2:-21011848 | MS.gene066720:CDS |
| AAGGTGTTAGTGCTGGGAAC+TGG | 0.561409 | 4.2:-21014855 | MS.gene066720:CDS |
| CCAATTGAAACCCAATCTCC+AGG | 0.561657 | 4.2:+21011444 | None:intergenic |
| TGGCAATTCTCCGTGACACC+AGG | 0.563016 | 4.2:+21013744 | None:intergenic |
| CAAGTAACACTAGGCAGCAG+AGG | 0.567935 | 4.2:+21014744 | None:intergenic |
| GGGCAGGAACAAGTTTCTTG+AGG | 0.568076 | 4.2:-21014830 | MS.gene066720:CDS |
| TTTCATCTCGGAGTCCACAT+TGG | 0.569558 | 4.2:+21012062 | None:intergenic |
| TTTGGTTGATGCAGTGGCGG+TGG | 0.573376 | 4.2:-21014933 | MS.gene066720:intron |
| CTATTAGATTTAGGGGAGAA+GGG | 0.575641 | 4.2:-21011841 | MS.gene066720:CDS |
| TGATGAATGGTTGAGAGTTG+AGG | 0.576334 | 4.2:-21012715 | MS.gene066720:CDS |
| GTTAAAACATTTGGCCAGGT+AGG | 0.579618 | 4.2:+21011898 | None:intergenic |
| GAGACGCTTTATATTTGGGA+GGG | 0.588717 | 4.2:-21011192 | MS.gene066720:CDS |
| CGTTGAGGCTCGCAGCATTG+TGG | 0.589439 | 4.2:-21014715 | MS.gene066720:CDS |
| CATCTGTGAAAGGTACCCTC+AGG | 0.589511 | 4.2:-21012205 | MS.gene066720:CDS |
| GATTTGGTCAAATTATACCC+TGG | 0.591979 | 4.2:-21013348 | MS.gene066720:CDS |
| TGGAGGTGGTCCAACTGGAG+TGG | 0.598114 | 4.2:-21013406 | MS.gene066720:CDS |
| AATAAACCAGCGAAAAGTCA+TGG | 0.602197 | 4.2:-21012655 | MS.gene066720:intron |
| TGATGTGAAAACAGGATCCA+TGG | 0.603473 | 4.2:-21013022 | MS.gene066720:CDS |
| CTAAAGAATAAACAGATGCA+TGG | 0.603919 | 4.2:-21012171 | MS.gene066720:CDS |
| CTTCCTGAAGATATTACGGA+CGG | 0.605747 | 4.2:+21014689 | None:intergenic |
| GCTGTCTGCTCGCCTCCCAG+AGG | 0.606207 | 4.2:+21011477 | None:intergenic |
| GGGACTCAAGTCAAATCTGA+AGG | 0.608763 | 4.2:-21011172 | None:intergenic |
| TGGCATTGCTGATCTGCTGA+AGG | 0.609063 | 4.2:-21012151 | MS.gene066720:CDS |
| ACCGACAATGTGTATGCACT+TGG | 0.609604 | 4.2:-21012690 | MS.gene066720:CDS |
| CTGTGAAAGGTACCCTCAGG+TGG | 0.613916 | 4.2:-21012202 | MS.gene066720:CDS |
| AAGACTGATGCAGACAACTC+AGG | 0.615045 | 4.2:-21012267 | MS.gene066720:CDS |
| TGTGGTATTCTGTCTATGCA+AGG | 0.616119 | 4.2:-21011404 | MS.gene066720:intron |
| TGTTACTTGCGGTACCGTTG+AGG | 0.617158 | 4.2:-21014730 | MS.gene066720:CDS |
| TTCCTGAAGATATTACGGAC+GGG | 0.617206 | 4.2:+21014690 | None:intergenic |
| GTGAAAGTAAAATAATTGCG+AGG | 0.621038 | 4.2:+21014768 | None:intergenic |
| GTGCCATAGCTACTGATGAA+TGG | 0.630752 | 4.2:-21012728 | MS.gene066720:CDS |
| AGCAGGAAGAAATTTCATCT+CGG | 0.631522 | 4.2:+21012050 | None:intergenic |
| TGAGACGCTTTATATTTGGG+AGG | 0.636157 | 4.2:-21011193 | MS.gene066720:CDS |
| CTAACCTTACGGTGGTGCAG+AGG | 0.637689 | 4.2:+21015168 | None:intergenic |
| CGTCCGTAATATCTTCAGGA+AGG | 0.637693 | 4.2:-21014688 | MS.gene066720:intron |
| TAATGAATGACATCTGTGAA+AGG | 0.638141 | 4.2:-21012215 | MS.gene066720:CDS |
| ACATGATCAAGTTACCTGAA+GGG | 0.639498 | 4.2:+21011803 | None:intergenic |
| TTAGATATAGCTCCACCTGA+GGG | 0.642435 | 4.2:+21012190 | None:intergenic |
| AGTTAAAATCACGCTCCTGG+AGG | 0.643487 | 4.2:-21013313 | MS.gene066720:CDS |
| GACTACTTAATCATAGCTGT+AGG | 0.644316 | 4.2:-21013792 | MS.gene066720:CDS |
| GGTCAATTTGCTCCTCTGGG+AGG | 0.646230 | 4.2:-21011489 | MS.gene066720:CDS |
| ACGGTACCGCAAGTAACACT+AGG | 0.649646 | 4.2:+21014735 | None:intergenic |
| TCCATTCGAACAGAAACATG+TGG | 0.650878 | 4.2:-21013931 | MS.gene066720:intron |
| TTTAGATATAGCTCCACCTG+AGG | 0.651676 | 4.2:+21012189 | None:intergenic |
| ATCACGCTCCTGGAGGCTGG+AGG | 0.653143 | 4.2:-21013306 | MS.gene066720:CDS |
| TATCAGGTTGCATCTCAGCA+AGG | 0.653961 | 4.2:-21011923 | MS.gene066720:intron |
| TACACTCAAAGAATTTCAGG+AGG | 0.672157 | 4.2:-21012238 | MS.gene066720:CDS |
| GCAAGTCAGCTGGCGCACAA+GGG | 0.679550 | 4.2:-21011237 | MS.gene066720:CDS |
| CTGCTGCCTAGTGTTACTTG+CGG | 0.683107 | 4.2:-21014741 | MS.gene066720:CDS |
| ACTGACAAAATCATGAAGTG+CGG | 0.684789 | 4.2:+21013374 | None:intergenic |
| TGAACTGAGAGTCATAGTCA+CGG | 0.696357 | 4.2:+21015201 | None:intergenic |
| ACAACGTGAACCTCATATCG+CGG | 0.706010 | 4.2:+21014795 | None:intergenic |
| GATCTGCTGAAGGAATCCAA+GGG | 0.715092 | 4.2:-21012141 | MS.gene066720:CDS |
| TTTGGTCAAATTATACCCTG+GGG | 0.717356 | 4.2:-21013346 | MS.gene066720:CDS |
| GATGATATCTAACCTTACGG+TGG | 0.732158 | 4.2:+21015160 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAGATAAACATTAATT+TGG | + | chr4.2:21012099-21012118 | None:intergenic | 15.0% |
| !! | ATCATTTATTTAATTAACAC+AGG | - | chr4.2:21013811-21013830 | MS.gene066720:CDS | 15.0% |
| !! | ATTTATTATTTACTTGACAT+TGG | - | chr4.2:21013643-21013662 | MS.gene066720:intron | 15.0% |
| !! | TGTGTTAATTAAATAAATGA+TGG | + | chr4.2:21013812-21013831 | None:intergenic | 15.0% |
| !! | TTTATGAATTAATTATGGTT+TGG | - | chr4.2:21011466-21011485 | MS.gene066720:CDS | 15.0% |
| !!! | TCATATTTTTGTTCATTTTT+TGG | - | chr4.2:21012319-21012338 | MS.gene066720:intron | 15.0% |
| !! | AAAAAAAATTCATGTACATG+TGG | + | chr4.2:21012165-21012184 | None:intergenic | 20.0% |
| !! | AAAAAAATTCATGTACATGT+GGG | + | chr4.2:21012164-21012183 | None:intergenic | 20.0% |
| !! | AACTAAAAACCAAAAAAACA+AGG | + | chr4.2:21012848-21012867 | None:intergenic | 20.0% |
| !! | AAGTAGATAAATAAAAGAGA+AGG | + | chr4.2:21011311-21011330 | None:intergenic | 20.0% |
| !! | CTGATTGTTAAATTGAATTT+CGG | - | chr4.2:21014095-21014114 | MS.gene066720:intron | 20.0% |
| !! | TAATAGATCTACGAAAATTT+CGG | - | chr4.2:21011390-21011409 | MS.gene066720:intron | 20.0% |
| !!! | AAAAGTTTACCTTTAAGAAA+TGG | + | chr4.2:21012696-21012715 | None:intergenic | 20.0% |
| !!! | AAAGATTTTATGACACAAAT+TGG | - | chr4.2:21013537-21013556 | MS.gene066720:intron | 20.0% |
| !!! | AACATTTGAAATTCAAAGAA+CGG | + | chr4.2:21014062-21014081 | None:intergenic | 20.0% |
| !!! | AGAGTATTAAACTTATCTTT+TGG | - | chr4.2:21012232-21012251 | MS.gene066720:CDS | 20.0% |
| !!! | ATTTAGAAATCGATTTGATT+TGG | - | chr4.2:21013226-21013245 | MS.gene066720:intron | 20.0% |
| !!! | GTCATAAAATCTTTTATGAA+TGG | + | chr4.2:21013531-21013550 | None:intergenic | 20.0% |
| !!! | TATTCTCATGCTTATTTTTT+AGG | - | chr4.2:21013319-21013338 | MS.gene066720:CDS | 20.0% |
| !!! | TTTGGTGTCTAATTATAAAT+AGG | - | chr4.2:21012367-21012386 | MS.gene066720:intron | 20.0% |
| ! | AAAATCCAATGATGACTAAA+GGG | - | chr4.2:21012804-21012823 | MS.gene066720:intron | 25.0% |
| ! | AATTCAATTTAACAATCAGC+AGG | + | chr4.2:21014094-21014113 | None:intergenic | 25.0% |
| ! | AATTTCAAACCATTTACCTA+TGG | - | chr4.2:21012010-21012029 | MS.gene066720:intron | 25.0% |
| ! | ACCACTAAAGAAATGAAAAA+TGG | - | chr4.2:21013444-21013463 | MS.gene066720:CDS | 25.0% |
| ! | ACTAAAGAAATGAAAAATGG+AGG | - | chr4.2:21013447-21013466 | MS.gene066720:CDS | 25.0% |
| ! | GAAATTACTACAATTCCATA+TGG | - | chr4.2:21013471-21013490 | MS.gene066720:CDS | 25.0% |
| ! | GTGTATTAAAGACAATTCTA+TGG | - | chr4.2:21014008-21014027 | MS.gene066720:intron | 25.0% |
| ! | TAAACGGAATTCTTCTATAT+GGG | + | chr4.2:21012419-21012438 | None:intergenic | 25.0% |
| ! | TTAAACGGAATTCTTCTATA+TGG | + | chr4.2:21012420-21012439 | None:intergenic | 25.0% |
| !! | AAAAAACTGTTAGTCTCATA+AGG | - | chr4.2:21015107-21015126 | MS.gene066720:intron | 25.0% |
| !! | AAATTGAATTTCGGCATTTT+AGG | - | chr4.2:21014104-21014123 | MS.gene066720:intron | 25.0% |
| !! | TAAATAGGAGATACATTTTG+TGG | - | chr4.2:21012382-21012401 | MS.gene066720:intron | 25.0% |
| !! | TAATGAACTAAGGCATTAAA+CGG | + | chr4.2:21012435-21012454 | None:intergenic | 25.0% |
| !! | TTTCCTATATTCCATTCTTT+TGG | - | chr4.2:21013862-21013881 | MS.gene066720:CDS | 25.0% |
| !!! | ATTCTTCATTTTGCTATTGT+TGG | - | chr4.2:21012991-21013010 | MS.gene066720:CDS | 25.0% |
| !!! | TCCATTTTTCATTTCTTTAG+TGG | + | chr4.2:21013448-21013467 | None:intergenic | 25.0% |
| !!! | TTTGGTTCATGTTTTTTATC+TGG | - | chr4.2:21012250-21012269 | MS.gene066720:CDS | 25.0% |
| !!! | TTTGTTTGTCCTTGTTTTTT+TGG | - | chr4.2:21012836-21012855 | MS.gene066720:intron | 25.0% |
| AAATTCTGCAATTTCATCCA+CGG | + | chr4.2:21014740-21014759 | None:intergenic | 30.0% | |
| AACAGTTAATCATAAGCTGT+TGG | - | chr4.2:21012063-21012082 | MS.gene066720:CDS | 30.0% | |
| AATAGTTAGTGGAGATGAAT+TGG | - | chr4.2:21012779-21012798 | MS.gene066720:intron | 30.0% | |
| ACAGTTAATCATAAGCTGTT+GGG | - | chr4.2:21012064-21012083 | MS.gene066720:CDS | 30.0% | |
| ACTTACACTCAAAGAATTTC+AGG | - | chr4.2:21014176-21014195 | MS.gene066720:intron | 30.0% | |
| AGAAGGTCCTATTAGATTTA+GGG | - | chr4.2:21014568-21014587 | MS.gene066720:intron | 30.0% | |
| AGCACAAGAGAAAAATAACA+TGG | + | chr4.2:21013614-21013633 | None:intergenic | 30.0% | |
| ATTTGGTCAAATTATACCCT+GGG | - | chr4.2:21013070-21013089 | MS.gene066720:CDS | 30.0% | |
| CAAAATCCAATGATGACTAA+AGG | - | chr4.2:21012803-21012822 | MS.gene066720:intron | 30.0% | |
| CATCCAAAAGAATGGAATAT+AGG | + | chr4.2:21013868-21013887 | None:intergenic | 30.0% | |
| CATTATTTGCATCTATGAGT+AGG | - | chr4.2:21013202-21013221 | MS.gene066720:intron | 30.0% | |
| CTAAAGAATAAACAGATGCA+TGG | - | chr4.2:21014246-21014265 | MS.gene066720:intron | 30.0% | |
| CTACTCATAGATGCAAATAA+TGG | + | chr4.2:21013204-21013223 | None:intergenic | 30.0% | |
| GTGAAAGTAAAATAATTGCG+AGG | + | chr4.2:21011652-21011671 | None:intergenic | 30.0% | |
| GTTATTGTAAATAACGCCAT+AGG | + | chr4.2:21012029-21012048 | None:intergenic | 30.0% | |
| TAAATAACGCCATAGGTAAA+TGG | + | chr4.2:21012022-21012041 | None:intergenic | 30.0% | |
| TAATGAATGACATCTGTGAA+AGG | - | chr4.2:21014202-21014221 | MS.gene066720:intron | 30.0% | |
| TACTACAATTCCATATGGAA+TGG | - | chr4.2:21013476-21013495 | MS.gene066720:CDS | 30.0% | |
| TAGATCTCAGTGTTATCAAA+TGG | - | chr4.2:21014650-21014669 | MS.gene066720:intron | 30.0% | |
| TATCCACTAGTAATGAACTA+AGG | + | chr4.2:21012445-21012464 | None:intergenic | 30.0% | |
| TTCGAATGGAAACAAGTAAA+AGG | + | chr4.2:21012476-21012495 | None:intergenic | 30.0% | |
| ! | ACTAACACCTTTTTCTTTTC+CGG | + | chr4.2:21011553-21011572 | None:intergenic | 30.0% |
| ! | CTATATTCCATTCTTTTGGA+TGG | - | chr4.2:21013866-21013885 | MS.gene066720:CDS | 30.0% |
| ! | GGATGAAATTGCAGAATTTT+GGG | - | chr4.2:21014741-21014760 | MS.gene066720:CDS | 30.0% |
| ! | TAACTAAATCTTTTACCCCA+GGG | + | chr4.2:21013089-21013108 | None:intergenic | 30.0% |
| ! | TAGGAAAAGTATAAGACACT+AGG | + | chr4.2:21013849-21013868 | None:intergenic | 30.0% |
| ! | TCATTACTAGTGGATATAAC+TGG | - | chr4.2:21012449-21012468 | MS.gene066720:intron | 30.0% |
| ! | TGGATGAAATTGCAGAATTT+TGG | - | chr4.2:21014740-21014759 | MS.gene066720:CDS | 30.0% |
| ! | TTAACTAAATCTTTTACCCC+AGG | + | chr4.2:21013090-21013109 | None:intergenic | 30.0% |
| ! | TTGTTTGGTGATATGACTTT+GGG | - | chr4.2:21014457-21014476 | MS.gene066720:intron | 30.0% |
| ! | TTTGTTTGGTGATATGACTT+TGG | - | chr4.2:21014456-21014475 | MS.gene066720:intron | 30.0% |
| ! | TTTTATGACACAAATTGGTC+AGG | - | chr4.2:21013542-21013561 | MS.gene066720:intron | 30.0% |
| ! | TTTTTCACTTAGTGTTTCAC+AGG | - | chr4.2:21012718-21012737 | MS.gene066720:CDS | 30.0% |
| !! | AAATCGATTTGATTTGGTCA+TGG | - | chr4.2:21013232-21013251 | MS.gene066720:intron | 30.0% |
| !! | GTTGATGATATCTAACCTTA+CGG | + | chr4.2:21011263-21011282 | None:intergenic | 30.0% |
| !! | TGTTTCTGCTTTTGTTTGTT+TGG | - | chr4.2:21014442-21014461 | MS.gene066720:intron | 30.0% |
| !!! | GGTTTTTGAAACTACATATC+AGG | - | chr4.2:21014478-21014497 | MS.gene066720:intron | 30.0% |
| !!! | TTCTTTTTTAACATCTCCCT+TGG | + | chr4.2:21014295-21014314 | None:intergenic | 30.0% |
| AACATGATCAAGTTACCTGA+AGG | + | chr4.2:21014618-21014637 | None:intergenic | 35.0% | |
| AATAAACCAGCGAAAAGTCA+TGG | - | chr4.2:21013762-21013781 | MS.gene066720:CDS | 35.0% | |
| AATCACCCTTTAGTCATCAT+TGG | + | chr4.2:21012812-21012831 | None:intergenic | 35.0% | |
| AATGTGTCCATCCAAAAGAA+TGG | + | chr4.2:21013876-21013895 | None:intergenic | 35.0% | |
| AATTTCATCCACGGTTATGA+TGG | + | chr4.2:21014731-21014750 | None:intergenic | 35.0% | |
| ACATGATCAAGTTACCTGAA+GGG | + | chr4.2:21014617-21014636 | None:intergenic | 35.0% | |
| ACATTTATCATGTCAGAGAC+TGG | + | chr4.2:21011823-21011842 | None:intergenic | 35.0% | |
| ACCATTAAAGTGAATGCTAC+AGG | + | chr4.2:21014421-21014440 | None:intergenic | 35.0% | |
| ACTGACAAAATCATGAAGTG+CGG | + | chr4.2:21013046-21013065 | None:intergenic | 35.0% | |
| AGCAGGAAGAAATTTCATCT+CGG | + | chr4.2:21014370-21014389 | None:intergenic | 35.0% | |
| AGTGTTATCAAATGGCAGTA+TGG | - | chr4.2:21014658-21014677 | MS.gene066720:intron | 35.0% | |
| ATGCCTTAGTTCATTACTAG+TGG | - | chr4.2:21012439-21012458 | MS.gene066720:intron | 35.0% | |
| ATTTCATCCACGGTTATGAT+GGG | + | chr4.2:21014730-21014749 | None:intergenic | 35.0% | |
| CAGAAGGTCCTATTAGATTT+AGG | - | chr4.2:21014567-21014586 | MS.gene066720:intron | 35.0% | |
| CAGAGTTACGCTTAAATTAG+AGG | + | chr4.2:21011346-21011365 | None:intergenic | 35.0% | |
| CTAAATCTAATAGGACCTTC+TGG | + | chr4.2:21014569-21014588 | None:intergenic | 35.0% | |
| CTATTAGATTTAGGGGAGAA+GGG | - | chr4.2:21014576-21014595 | MS.gene066720:intron | 35.0% | |
| GAAGACAAGTTCAAAAGAGA+TGG | - | chr4.2:21013369-21013388 | MS.gene066720:CDS | 35.0% | |
| GAAGGTCCTATTAGATTTAG+GGG | - | chr4.2:21014569-21014588 | MS.gene066720:intron | 35.0% | |
| GACTACTTAATCATAGCTGT+AGG | - | chr4.2:21012625-21012644 | MS.gene066720:intron | 35.0% | |
| GAGAAATAGCATTAGCCAAT+AGG | + | chr4.2:21013790-21013809 | None:intergenic | 35.0% | |
| GAGTGTGAAAAAAATCCAGA+AGG | - | chr4.2:21014551-21014570 | MS.gene066720:intron | 35.0% | |
| GGATGAGACGCTTTATATTT+GGG | - | chr4.2:21015221-21015240 | MS.gene066720:CDS | 35.0% | |
| GTCAACACATTTAATACTCC+TGG | - | chr4.2:21012655-21012674 | MS.gene066720:intron | 35.0% | |
| TAATCATAAGCTGTTGGGTT+TGG | - | chr4.2:21012069-21012088 | MS.gene066720:CDS | 35.0% | |
| TACACTCAAAGAATTTCAGG+AGG | - | chr4.2:21014179-21014198 | MS.gene066720:intron | 35.0% | |
| TAGAGAAACGTTGGAAGAAT+TGG | + | chr4.2:21011189-21011208 | None:intergenic | 35.0% | |
| TCATTAGCATGTGACATAGT+TGG | - | chr4.2:21011979-21011998 | MS.gene066720:intron | 35.0% | |
| TCCTGTAGCATTCACTTTAA+TGG | - | chr4.2:21014417-21014436 | MS.gene066720:intron | 35.0% | |
| TGAAAAAGAAGAATTCGTCG+TGG | - | chr4.2:21012597-21012616 | MS.gene066720:intron | 35.0% | |
| TGACACAAACAAGTCAACAT+CGG | + | chr4.2:21011884-21011903 | None:intergenic | 35.0% | |
| TGACCTTCCTGAAGATATTA+CGG | + | chr4.2:21011735-21011754 | None:intergenic | 35.0% | |
| TGCAGCTAAGAAATAGTTAG+TGG | - | chr4.2:21012768-21012787 | MS.gene066720:intron | 35.0% | |
| TGGATGAGACGCTTTATATT+TGG | - | chr4.2:21015220-21015239 | MS.gene066720:CDS | 35.0% | |
| TTCCATCCGGTTAAAACATT+TGG | + | chr4.2:21014531-21014550 | None:intergenic | 35.0% | |
| TTTAGTTAAAATCACGCTCC+TGG | - | chr4.2:21013101-21013120 | MS.gene066720:intron | 35.0% | |
| TTTGGTCAAATTATACCCTG+GGG | - | chr4.2:21013071-21013090 | MS.gene066720:CDS | 35.0% | |
| ! | ACTTCATGATTTTGTCAGTG+AGG | - | chr4.2:21013047-21013066 | MS.gene066720:CDS | 35.0% |
| ! | ATTTAATACTCCTGGTGTCA+CGG | - | chr4.2:21012663-21012682 | MS.gene066720:CDS | 35.0% |
| ! | CAATAAAACATGCACTGATG+AGG | + | chr4.2:21014886-21014905 | None:intergenic | 35.0% |
| ! | GATTTGGTCAAATTATACCC+TGG | - | chr4.2:21013069-21013088 | MS.gene066720:CDS | 35.0% |
| ! | GGAGAATTGCCATTTCTTAA+AGG | - | chr4.2:21012684-21012703 | MS.gene066720:CDS | 35.0% |
| ! | TGATTTTGTCAGTGAGGATT+TGG | - | chr4.2:21013053-21013072 | MS.gene066720:CDS | 35.0% |
| !! | AAAGAAAAAGGTGTTAGTGC+TGG | - | chr4.2:21011555-21011574 | MS.gene066720:intron | 35.0% |
| !! | AAGAAAAAGGTGTTAGTGCT+GGG | - | chr4.2:21011556-21011575 | MS.gene066720:intron | 35.0% |
| !! | GATGGTATTGATGTGAAAAC+AGG | - | chr4.2:21013387-21013406 | MS.gene066720:CDS | 35.0% |
| !! | GCATGTTTTATTGTTCCTCA+AGG | - | chr4.2:21014893-21014912 | MS.gene066720:CDS | 35.0% |
| !! | GGCATTTTAGGAAGATATTG+CGG | - | chr4.2:21014116-21014135 | MS.gene066720:intron | 35.0% |
| !!! | CTTCATTTTGCTATTGTTGG+AGG | - | chr4.2:21012994-21013013 | MS.gene066720:CDS | 35.0% |
| !!! | GGAAAGTTTTAGAGAAACGT+TGG | + | chr4.2:21011198-21011217 | None:intergenic | 35.0% |
| !!! | GTGTTTCACAGGATTTTTTG+TGG | - | chr4.2:21012729-21012748 | MS.gene066720:CDS | 35.0% |
| !!! | TTTTTTCACACTCTTCCATC+CGG | + | chr4.2:21014544-21014563 | None:intergenic | 35.0% |
| ACACCAAAATATCCCAAGTG+TGG | + | chr4.2:21012355-21012374 | None:intergenic | 40.0% | |
| ACCAAGTGCATACACATTGT+CGG | + | chr4.2:21013731-21013750 | None:intergenic | 40.0% | |
| ACCTAAATGCTTGTACCTTG+AGG | + | chr4.2:21014911-21014930 | None:intergenic | 40.0% | |
| AGACAATTCTATGGACGATC+TGG | - | chr4.2:21014017-21014036 | MS.gene066720:intron | 40.0% | |
| CAACCATTCATCAGTAGCTA+TGG | + | chr4.2:21013695-21013714 | None:intergenic | 40.0% | |
| CCTATTAGATTTAGGGGAGA+AGG | - | chr4.2:21014575-21014594 | MS.gene066720:intron | 40.0% | |
| CCTTCTCCCCTAAATCTAAT+AGG | + | chr4.2:21014578-21014597 | None:intergenic | 40.0% | |
| CGAAAAGTCATGGTACCTAT+TGG | - | chr4.2:21013772-21013791 | MS.gene066720:CDS | 40.0% | |
| CTTCCTGAAGATATTACGGA+CGG | + | chr4.2:21011731-21011750 | None:intergenic | 40.0% | |
| GACAATTCTATGGACGATCT+GGG | - | chr4.2:21014018-21014037 | MS.gene066720:intron | 40.0% | |
| GAGACGCTTTATATTTGGGA+GGG | - | chr4.2:21015225-21015244 | MS.gene066720:CDS | 40.0% | |
| GATGAATGGTTGAGAGTTGA+GGG | - | chr4.2:21013703-21013722 | MS.gene066720:intron | 40.0% | |
| GATGATATCTAACCTTACGG+TGG | + | chr4.2:21011260-21011279 | None:intergenic | 40.0% | |
| GTAATATCTTCAGGAAGGTC+AGG | - | chr4.2:21011734-21011753 | MS.gene066720:intron | 40.0% | |
| GTTAAAACATTTGGCCAGGT+AGG | + | chr4.2:21014522-21014541 | None:intergenic | 40.0% | |
| TACATGTGTGTGCATTGTAC+AGG | - | chr4.2:21012876-21012895 | MS.gene066720:CDS | 40.0% | |
| TCATGGATTCTTACATGTGC+TGG | - | chr4.2:21013249-21013268 | MS.gene066720:intron | 40.0% | |
| TCCATTCGAACAGAAACATG+TGG | - | chr4.2:21012486-21012505 | MS.gene066720:intron | 40.0% | |
| TCCTCAAGGTACAAGCATTT+AGG | - | chr4.2:21014907-21014926 | MS.gene066720:CDS | 40.0% | |
| TGAACTGAGAGTCATAGTCA+CGG | + | chr4.2:21011219-21011238 | None:intergenic | 40.0% | |
| TGAGACGCTTTATATTTGGG+AGG | - | chr4.2:21015224-21015243 | MS.gene066720:CDS | 40.0% | |
| TGATGAATGGTTGAGAGTTG+AGG | - | chr4.2:21013702-21013721 | MS.gene066720:intron | 40.0% | |
| TGATGTGAAAACAGGATCCA+TGG | - | chr4.2:21013395-21013414 | MS.gene066720:CDS | 40.0% | |
| TGTGGTATTCTGTCTATGCA+AGG | - | chr4.2:21015013-21015032 | MS.gene066720:intron | 40.0% | |
| TTAACAATCAGCAGGAAGAG+AGG | + | chr4.2:21014086-21014105 | None:intergenic | 40.0% | |
| TTAGATATAGCTCCACCTGA+GGG | + | chr4.2:21014230-21014249 | None:intergenic | 40.0% | |
| TTCCTGAAGATATTACGGAC+GGG | + | chr4.2:21011730-21011749 | None:intergenic | 40.0% | |
| TTTAGATATAGCTCCACCTG+AGG | + | chr4.2:21014231-21014250 | None:intergenic | 40.0% | |
| TTTCATCCACGGTTATGATG+GGG | + | chr4.2:21014729-21014748 | None:intergenic | 40.0% | |
| ! | ATGCACTGATGAGGAAACAT+TGG | + | chr4.2:21014877-21014896 | None:intergenic | 40.0% |
| ! | CAGAAAGTACAGCACAATGA+TGG | + | chr4.2:21012198-21012217 | None:intergenic | 40.0% |
| ! | GATCCACACTTGGGATATTT+TGG | - | chr4.2:21012349-21012368 | MS.gene066720:intron | 40.0% |
| ! | TCCACATGTTTCTGTTCGAA+TGG | + | chr4.2:21012490-21012509 | None:intergenic | 40.0% |
| ! | TTAGGTCAATTTGCTCCTCT+GGG | - | chr4.2:21014925-21014944 | MS.gene066720:intron | 40.0% |
| ! | TTTAGGTCAATTTGCTCCTC+TGG | - | chr4.2:21014924-21014943 | MS.gene066720:intron | 40.0% |
| !! | GATTCTTACATGTGCTGGTT+GGG | - | chr4.2:21013254-21013273 | MS.gene066720:intron | 40.0% |
| !! | TCCATGGTTGTGAAAGTATC+TGG | - | chr4.2:21013411-21013430 | MS.gene066720:CDS | 40.0% |
| !! | TTATGGTTTGGTTGATGCAG+TGG | - | chr4.2:21011478-21011497 | MS.gene066720:CDS | 40.0% |
| !!! | ACCTGGCCAAATGTTTTAAC+CGG | - | chr4.2:21014522-21014541 | MS.gene066720:intron | 40.0% |
| !!! | CATTTTGCTATTGTTGGAGG+TGG | - | chr4.2:21012997-21013016 | MS.gene066720:CDS | 40.0% |
| !!! | TGTAGCACTGACACTTTTGA+TGG | - | chr4.2:21011788-21011807 | MS.gene066720:intron | 40.0% |
| AACCCGTCCGTAATATCTTC+AGG | - | chr4.2:21011725-21011744 | MS.gene066720:intron | 45.0% | |
| AAGACTGATGCAGACAACTC+AGG | - | chr4.2:21014150-21014169 | MS.gene066720:intron | 45.0% | |
| ACAACGTGAACCTCATATCG+CGG | + | chr4.2:21011625-21011644 | None:intergenic | 45.0% | |
| ACCGACAATGTGTATGCACT+TGG | - | chr4.2:21013727-21013746 | MS.gene066720:intron | 45.0% | |
| AGTTAAAATCACGCTCCTGG+AGG | - | chr4.2:21013104-21013123 | MS.gene066720:intron | 45.0% | |
| ATTTCTTCCTGCTACAGCTC+AGG | - | chr4.2:21014377-21014396 | MS.gene066720:intron | 45.0% | |
| CAATTGGACACAGCAGTCAA+TGG | - | chr4.2:21014989-21015008 | MS.gene066720:intron | 45.0% | |
| CCAATTGAAACCCAATCTCC+AGG | + | chr4.2:21014976-21014995 | None:intergenic | 45.0% | |
| CCTGCATTTCTAAGCTAGCT+GGG | - | chr4.2:21013986-21014005 | MS.gene066720:intron | 45.0% | |
| CCTGGAGATTGGGTTTCAAT+TGG | - | chr4.2:21014973-21014992 | MS.gene066720:intron | 45.0% | |
| CGTCCGTAATATCTTCAGGA+AGG | - | chr4.2:21011729-21011748 | MS.gene066720:intron | 45.0% | |
| CTCTCTTCATCACTCACACT+AGG | + | chr4.2:21012964-21012983 | None:intergenic | 45.0% | |
| GATCTGCTGAAGGAATCCAA+GGG | - | chr4.2:21014276-21014295 | MS.gene066720:intron | 45.0% | |
| GCCAGATACTTTCACAACCA+TGG | + | chr4.2:21013415-21013434 | None:intergenic | 45.0% | |
| GGAGTCCACATTGGAAAAAG+CGG | + | chr4.2:21014349-21014368 | None:intergenic | 45.0% | |
| GGCTGTTGCTACATCTGAAT+CGG | - | chr4.2:21011525-21011544 | MS.gene066720:intron | 45.0% | |
| GGTGGAAAAATCCGCCATAT+CGG | + | chr4.2:21014703-21014722 | None:intergenic | 45.0% | |
| GGTTCATCTGATCCACACTT+GGG | - | chr4.2:21012340-21012359 | MS.gene066720:intron | 45.0% | |
| GTGCCATAGCTACTGATGAA+TGG | - | chr4.2:21013689-21013708 | MS.gene066720:intron | 45.0% | |
| GTTTGTGTCAGTTTCGTGTC+CGG | - | chr4.2:21011894-21011913 | MS.gene066720:CDS | 45.0% | |
| TCCGGTTAAAACATTTGGCC+AGG | + | chr4.2:21014526-21014545 | None:intergenic | 45.0% | |
| TCTCAATGATCCGCGATATG+AGG | - | chr4.2:21011612-21011631 | MS.gene066720:intron | 45.0% | |
| TGATCTGCTGAAGGAATCCA+AGG | - | chr4.2:21014275-21014294 | MS.gene066720:intron | 45.0% | |
| TGGTTCATCTGATCCACACT+TGG | - | chr4.2:21012339-21012358 | MS.gene066720:intron | 45.0% | |
| TTCCATATGGAATGGCTGTC+TGG | - | chr4.2:21013484-21013503 | MS.gene066720:CDS | 45.0% | |
| TTTCATCTCGGAGTCCACAT+TGG | + | chr4.2:21014358-21014377 | None:intergenic | 45.0% | |
| ! | AGTTCTAGCAGCGTTGTCTA+TGG | + | chr4.2:21014790-21014809 | None:intergenic | 45.0% |
| ! | CATAAGCTGTTGGGTTTGGT+TGG | - | chr4.2:21012073-21012092 | MS.gene066720:CDS | 45.0% |
| ! | GGATTCTTACATGTGCTGGT+TGG | - | chr4.2:21013253-21013272 | MS.gene066720:intron | 45.0% |
| ! | TAGGTACCATGACTTTTCGC+TGG | + | chr4.2:21013771-21013790 | None:intergenic | 45.0% |
| ! | TATCAGGTTGCATCTCAGCA+AGG | - | chr4.2:21014494-21014513 | MS.gene066720:intron | 45.0% |
| ! | TTTTTACCTCGCCGATATGG+CGG | - | chr4.2:21014689-21014708 | MS.gene066720:CDS | 45.0% |
| !! | AGTGCTTCGGTGTTTCTTAC+TGG | - | chr4.2:21011925-21011944 | MS.gene066720:intron | 45.0% |
| !! | ATCGGTGCCGGAAAAGAAAA+AGG | - | chr4.2:21011543-21011562 | MS.gene066720:intron | 45.0% |
| !!! | CAAGACCGCTTTTTCCAATG+TGG | - | chr4.2:21014341-21014360 | MS.gene066720:intron | 45.0% |
| !!! | GGCCAAATGTTTTAACCGGA+TGG | - | chr4.2:21014526-21014545 | MS.gene066720:intron | 45.0% |
| !!! | TTTTATTTATGAATTAATTA+TGG | - | chr4.2:21011461-21011480 | MS.gene066720:CDS | 5.0% |
| AAAAATCCGCCATATCGGCG+AGG | + | chr4.2:21014698-21014717 | None:intergenic | 50.0% | |
| ACCATACCCCATCATAACCG+TGG | - | chr4.2:21014720-21014739 | MS.gene066720:CDS | 50.0% | |
| ACGGTACCGCAAGTAACACT+AGG | + | chr4.2:21011685-21011704 | None:intergenic | 50.0% | |
| ATTGTTGGAGGTGGTCCAAC+TGG | - | chr4.2:21013006-21013025 | MS.gene066720:CDS | 50.0% | |
| CAAATGGCAGTATGGCGAGA+GGG | - | chr4.2:21014666-21014685 | MS.gene066720:intron | 50.0% | |
| CAAGTAACACTAGGCAGCAG+AGG | + | chr4.2:21011676-21011695 | None:intergenic | 50.0% | |
| GACACAGCAGTCAATGGTTG+TGG | - | chr4.2:21014995-21015014 | MS.gene066720:intron | 50.0% | |
| GACCAGACAGCCATTCCATA+TGG | + | chr4.2:21013489-21013508 | None:intergenic | 50.0% | |
| GCCTGCATTTCTAAGCTAGC+TGG | - | chr4.2:21013985-21014004 | MS.gene066720:intron | 50.0% | |
| GCTGTCTGGTCAACTGGTAT+TGG | - | chr4.2:21013498-21013517 | MS.gene066720:CDS | 50.0% | |
| GGGCAGGAACAAGTTTCTTG+AGG | - | chr4.2:21011587-21011606 | MS.gene066720:intron | 50.0% | |
| TCAAATGGCAGTATGGCGAG+AGG | - | chr4.2:21014665-21014684 | MS.gene066720:intron | 50.0% | |
| TCCGGTGTGTGTAAGTGCTT+CGG | - | chr4.2:21011912-21011931 | MS.gene066720:CDS | 50.0% | |
| TCTAGCAGCGTTGTCTATGG+CGG | + | chr4.2:21014787-21014806 | None:intergenic | 50.0% | |
| TGCACAGCTACCTGGAGATT+GGG | - | chr4.2:21014963-21014982 | MS.gene066720:intron | 50.0% | |
| TGCTACATCTGAATCGGTGC+CGG | - | chr4.2:21011531-21011550 | MS.gene066720:intron | 50.0% | |
| TGGCATTGCTGATCTGCTGA+AGG | - | chr4.2:21014266-21014285 | MS.gene066720:intron | 50.0% | |
| ! | AAGGTGTTAGTGCTGGGAAC+TGG | - | chr4.2:21011562-21011581 | MS.gene066720:intron | 50.0% |
| ! | ACCGAAGCACTTACACACAC+CGG | + | chr4.2:21011916-21011935 | None:intergenic | 50.0% |
| ! | ACGGTTATGATGGGGTATGG+TGG | + | chr4.2:21014721-21014740 | None:intergenic | 50.0% |
| ! | CCCAGCTAGCTTAGAAATGC+AGG | + | chr4.2:21013989-21014008 | None:intergenic | 50.0% |
| ! | GGGTTTTTACCTCGCCGATA+TGG | - | chr4.2:21014686-21014705 | MS.gene066720:intron | 50.0% |
| ! | GTTAGTGCTGGGAACTGGTT+GGG | - | chr4.2:21011567-21011586 | MS.gene066720:intron | 50.0% |
| ! | TCCACGGTTATGATGGGGTA+TGG | + | chr4.2:21014724-21014743 | None:intergenic | 50.0% |
| ! | TGGTCTTTTGGCATACGGTG+AGG | - | chr4.2:21011504-21011523 | MS.gene066720:CDS | 50.0% |
| ! | TGTTACTTGCGGTACCGTTG+AGG | - | chr4.2:21011687-21011706 | MS.gene066720:intron | 50.0% |
| ! | TGTTAGTGCTGGGAACTGGT+TGG | - | chr4.2:21011566-21011585 | MS.gene066720:intron | 50.0% |
| !! | CATCTGTGAAAGGTACCCTC+AGG | - | chr4.2:21014212-21014231 | MS.gene066720:intron | 50.0% |
| !! | CTGCTGCCTAGTGTTACTTG+CGG | - | chr4.2:21011676-21011695 | MS.gene066720:intron | 50.0% |
| !! | TCTTACATGTGCTGGTTGGG+TGG | - | chr4.2:21013257-21013276 | MS.gene066720:intron | 50.0% |
| !! | TGGTTTGGTTGATGCAGTGG+CGG | - | chr4.2:21011481-21011500 | MS.gene066720:CDS | 50.0% |
| AAAATCACGCTCCTGGAGGC+TGG | - | chr4.2:21013108-21013127 | MS.gene066720:intron | 55.0% | |
| ACATGCACCTGAGCTGTAGC+AGG | + | chr4.2:21014387-21014406 | None:intergenic | 55.0% | |
| AGATATGACCTCCAGCCTCC+AGG | + | chr4.2:21013122-21013141 | None:intergenic | 55.0% | |
| CACAATGCTGCGAGCCTCAA+CGG | + | chr4.2:21011704-21011723 | None:intergenic | 55.0% | |
| CTAACCTTACGGTGGTGCAG+AGG | + | chr4.2:21011252-21011271 | None:intergenic | 55.0% | |
| CTGCACAGCTACCTGGAGAT+TGG | - | chr4.2:21014962-21014981 | MS.gene066720:intron | 55.0% | |
| GCTGCAAACTCCACTCCAGT+TGG | + | chr4.2:21013024-21013043 | None:intergenic | 55.0% | |
| GGAATGGCTGTCTGGTCAAC+TGG | - | chr4.2:21013492-21013511 | MS.gene066720:CDS | 55.0% | |
| TGGCAATTCTCCGTGACACC+AGG | + | chr4.2:21012676-21012695 | None:intergenic | 55.0% | |
| TTCTCCTCTGCACCACCGTA+AGG | - | chr4.2:21011245-21011264 | MS.gene066720:intron | 55.0% | |
| ! | ATCTCAGCAAGGCACCTACC+TGG | - | chr4.2:21014505-21014524 | MS.gene066720:intron | 55.0% |
| ! | ATGCAGTGGCGGTGGTCTTT+TGG | - | chr4.2:21011492-21011511 | MS.gene066720:CDS | 55.0% |
| ! | GGCGGTGGTCTTTTGGCATA+CGG | - | chr4.2:21011499-21011518 | MS.gene066720:CDS | 55.0% |
| ! | GGTCAATTTGCTCCTCTGGG+AGG | - | chr4.2:21014928-21014947 | MS.gene066720:intron | 55.0% |
| ! | TTTGGTTGATGCAGTGGCGG+TGG | - | chr4.2:21011484-21011503 | MS.gene066720:CDS | 55.0% |
| !! | CTGTGAAAGGTACCCTCAGG+TGG | - | chr4.2:21014215-21014234 | MS.gene066720:intron | 55.0% |
| !! | GTCATCGGTTCAAGCCCTTC+AGG | - | chr4.2:21014600-21014619 | MS.gene066720:intron | 55.0% |
| !! | TTAGGGGAGAAGGGCGTCAT+CGG | - | chr4.2:21014585-21014604 | MS.gene066720:intron | 55.0% |
| AGCAAGTCAGCTGGCGCACA+AGG | - | chr4.2:21015179-21015198 | MS.gene066720:CDS | 60.0% | |
| CAGACAGCTGCACAGCTACC+TGG | - | chr4.2:21014955-21014974 | MS.gene066720:intron | 60.0% | |
| CGTTGAGGCTCGCAGCATTG+TGG | - | chr4.2:21011702-21011721 | MS.gene066720:intron | 60.0% | |
| GCAAGTCAGCTGGCGCACAA+GGG | - | chr4.2:21015180-21015199 | MS.gene066720:CDS | 60.0% | |
| TGGAGGTGGTCCAACTGGAG+TGG | - | chr4.2:21013011-21013030 | MS.gene066720:CDS | 60.0% | |
| ! | GCAGCGTTGTCTATGGCGGA+TGG | + | chr4.2:21014783-21014802 | None:intergenic | 60.0% |
| ! | GGGCGTTAGTGGTGTCAGAC+TGG | - | chr4.2:21015200-21015219 | MS.gene066720:CDS | 60.0% |
| !! | CTATGGCGGATGGCGGTTTG+TGG | + | chr4.2:21014773-21014792 | None:intergenic | 60.0% |
| !! | GCGTTGTCTATGGCGGATGG+CGG | + | chr4.2:21014780-21014799 | None:intergenic | 60.0% |
| ATCACGCTCCTGGAGGCTGG+AGG | - | chr4.2:21013111-21013130 | MS.gene066720:intron | 65.0% | |
| GTGCTGGGAACTGGTTGGGC+AGG | - | chr4.2:21011571-21011590 | MS.gene066720:intron | 65.0% | |
| ! | TGGCGGATGGCGGTTTGTGG+CGG | + | chr4.2:21014770-21014789 | None:intergenic | 65.0% |
| !! | CTGGCGCACAAGGGCGTTAG+TGG | - | chr4.2:21015189-21015208 | MS.gene066720:CDS | 65.0% |
| GCTGTCTGCTCGCCTCCCAG+AGG | + | chr4.2:21014943-21014962 | None:intergenic | 70.0% | |
| ! | CGGATGGCGGTTTGTGGCGG+AGG | + | chr4.2:21014767-21014786 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 21011175 | 21015264 | 21011175 | ID=MS.gene066720 |
| chr4.2 | mRNA | 21011175 | 21015264 | 21011175 | ID=MS.gene066720.t1;Parent=MS.gene066720 |
| chr4.2 | exon | 21015173 | 21015264 | 21015173 | ID=MS.gene066720.t1.exon1;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21015173 | 21015264 | 21015173 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21014689 | 21014941 | 21014689 | ID=MS.gene066720.t1.exon2;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21014689 | 21014941 | 21014689 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21013734 | 21013940 | 21013734 | ID=MS.gene066720.t1.exon3;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21013734 | 21013940 | 21013734 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21013291 | 21013541 | 21013291 | ID=MS.gene066720.t1.exon4;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21013291 | 21013541 | 21013291 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21012876 | 21013098 | 21012876 | ID=MS.gene066720.t1.exon5;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21012876 | 21013098 | 21012876 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21012656 | 21012760 | 21012656 | ID=MS.gene066720.t1.exon6;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21012656 | 21012760 | 21012656 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21012041 | 21012313 | 21012041 | ID=MS.gene066720.t1.exon7;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21012041 | 21012313 | 21012041 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21011818 | 21011939 | 21011818 | ID=MS.gene066720.t1.exon8;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21011818 | 21011939 | 21011818 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21011405 | 21011524 | 21011405 | ID=MS.gene066720.t1.exon9;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21011405 | 21011524 | 21011405 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| chr4.2 | exon | 21011175 | 21011262 | 21011175 | ID=MS.gene066720.t1.exon10;Parent=MS.gene066720.t1 |
| chr4.2 | CDS | 21011175 | 21011262 | 21011175 | ID=cds.MS.gene066720.t1;Parent=MS.gene066720.t1 |
| Gene Sequence |
| Protein sequence |
