Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57021.t1 | XP_003615703.2 | 99.4 | 501 | 3 | 0 | 1 | 501 | 1 | 501 | 5.40E-293 | 1016.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57021.t1 | O80874 | 74.0 | 511 | 120 | 2 | 1 | 501 | 1 | 508 | 3.0e-223 | 775.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57021.t1 | G7JZJ2 | 99.4 | 501 | 3 | 0 | 1 | 501 | 1 | 501 | 3.9e-293 | 1016.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009833 | MS.gene57021 | PPI |
| MS.gene066720 | MS.gene57021 | PPI |
| MS.gene53986 | MS.gene57021 | PPI |
| MS.gene002362 | MS.gene57021 | PPI |
| MS.gene018389 | MS.gene57021 | PPI |
| MS.gene046054 | MS.gene57021 | PPI |
| MS.gene57946 | MS.gene57021 | PPI |
| MS.gene32211 | MS.gene57021 | PPI |
| MS.gene048480 | MS.gene57021 | PPI |
| MS.gene50180 | MS.gene57021 | PPI |
| MS.gene064199 | MS.gene57021 | PPI |
| MS.gene01745 | MS.gene57021 | PPI |
| MS.gene03971 | MS.gene57021 | PPI |
| MS.gene069940 | MS.gene57021 | PPI |
| MS.gene01336 | MS.gene57021 | PPI |
| MS.gene035652 | MS.gene57021 | PPI |
| MS.gene048610 | MS.gene57021 | PPI |
| MS.gene02306 | MS.gene57021 | PPI |
| MS.gene052562 | MS.gene57021 | PPI |
| MS.gene012456 | MS.gene57021 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57021.t1 | MTR_5g071250 | 99.401 | 501 | 3 | 0 | 1 | 501 | 1 | 501 | 0.0 | 1031 |
| MS.gene57021.t1 | MTR_5g071250 | 98.982 | 393 | 4 | 0 | 1 | 393 | 1 | 393 | 0.0 | 806 |
| MS.gene57021.t1 | MTR_3g464380 | 77.822 | 505 | 107 | 2 | 1 | 501 | 1 | 504 | 0.0 | 796 |
| MS.gene57021.t1 | MTR_4g090580 | 76.327 | 452 | 107 | 0 | 50 | 501 | 92 | 543 | 0.0 | 749 |
| MS.gene57021.t1 | MTR_4g045997 | 38.992 | 377 | 211 | 9 | 13 | 375 | 1 | 372 | 2.12e-75 | 248 |
| MS.gene57021.t1 | MTR_4g045997 | 36.957 | 138 | 73 | 4 | 373 | 501 | 445 | 577 | 2.37e-15 | 79.0 |
| MS.gene57021.t1 | MTR_4g045997 | 38.992 | 377 | 211 | 9 | 13 | 375 | 1 | 372 | 2.22e-75 | 247 |
| MS.gene57021.t1 | MTR_2g011730 | 41.796 | 323 | 175 | 7 | 63 | 375 | 51 | 370 | 4.39e-74 | 244 |
| MS.gene57021.t1 | MTR_2g011730 | 36.667 | 120 | 67 | 2 | 386 | 501 | 464 | 578 | 4.95e-13 | 72.0 |
| MS.gene57021.t1 | MTR_4g091240 | 41.176 | 323 | 177 | 7 | 63 | 375 | 51 | 370 | 4.29e-73 | 242 |
| MS.gene57021.t1 | MTR_4g091240 | 35.833 | 120 | 68 | 2 | 386 | 501 | 464 | 578 | 1.90e-12 | 70.1 |
| MS.gene57021.t1 | MTR_4g045993 | 40.179 | 336 | 179 | 8 | 53 | 375 | 38 | 364 | 1.88e-70 | 235 |
| MS.gene57021.t1 | MTR_4g045993 | 33.058 | 121 | 72 | 2 | 385 | 501 | 454 | 569 | 6.50e-11 | 65.1 |
| MS.gene57021.t1 | MTR_4g091240 | 37.594 | 266 | 155 | 6 | 120 | 375 | 2 | 266 | 2.09e-50 | 179 |
| MS.gene57021.t1 | MTR_4g091240 | 35.833 | 120 | 68 | 2 | 386 | 501 | 360 | 474 | 1.79e-12 | 69.7 |
| MS.gene57021.t1 | MTR_0931s0010 | 28.802 | 434 | 271 | 11 | 72 | 501 | 243 | 642 | 3.75e-36 | 143 |
| MS.gene57021.t1 | MTR_8g094730 | 25.109 | 458 | 286 | 14 | 62 | 490 | 83 | 512 | 3.92e-16 | 81.3 |
| MS.gene57021.t1 | MTR_8g094730 | 25.109 | 458 | 286 | 14 | 62 | 490 | 83 | 512 | 4.77e-16 | 81.3 |
| MS.gene57021.t1 | MTR_8g094730 | 26.619 | 417 | 238 | 16 | 93 | 490 | 28 | 395 | 3.73e-13 | 71.6 |
| MS.gene57021.t1 | MTR_8g094730 | 25.068 | 367 | 232 | 11 | 62 | 399 | 83 | 435 | 2.21e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57021.t1 | AT2G29990 | 73.973 | 511 | 120 | 2 | 1 | 501 | 1 | 508 | 0.0 | 766 |
| MS.gene57021.t1 | AT1G07180 | 75.207 | 484 | 105 | 1 | 33 | 501 | 27 | 510 | 0.0 | 749 |
| MS.gene57021.t1 | AT4G28220 | 40.184 | 326 | 175 | 8 | 67 | 379 | 52 | 370 | 6.01e-73 | 240 |
| MS.gene57021.t1 | AT4G28220 | 40.184 | 326 | 175 | 8 | 67 | 379 | 52 | 370 | 1.90e-72 | 240 |
| MS.gene57021.t1 | AT4G28220 | 34.711 | 121 | 70 | 2 | 385 | 501 | 456 | 571 | 2.67e-12 | 69.7 |
| MS.gene57021.t1 | AT4G21490 | 38.058 | 381 | 220 | 7 | 29 | 396 | 15 | 392 | 4.01e-69 | 232 |
| MS.gene57021.t1 | AT4G21490 | 33.333 | 120 | 71 | 2 | 386 | 501 | 466 | 580 | 8.59e-11 | 64.7 |
| MS.gene57021.t1 | AT4G21490 | 38.058 | 381 | 219 | 7 | 29 | 396 | 15 | 391 | 6.15e-69 | 231 |
| MS.gene57021.t1 | AT4G21490 | 33.333 | 120 | 71 | 2 | 386 | 501 | 465 | 579 | 8.51e-11 | 64.7 |
| MS.gene57021.t1 | AT4G05020 | 39.722 | 360 | 197 | 8 | 32 | 375 | 18 | 373 | 1.41e-66 | 225 |
| MS.gene57021.t1 | AT4G05020 | 34.167 | 120 | 70 | 2 | 386 | 501 | 468 | 582 | 2.28e-11 | 66.6 |
| MS.gene57021.t1 | AT4G05020 | 39.722 | 360 | 197 | 8 | 32 | 375 | 18 | 373 | 4.47e-66 | 224 |
| MS.gene57021.t1 | AT2G20800 | 34.660 | 427 | 227 | 10 | 10 | 413 | 5 | 402 | 7.24e-62 | 213 |
| MS.gene57021.t1 | AT2G20800 | 36.364 | 121 | 68 | 2 | 385 | 501 | 467 | 582 | 2.41e-13 | 72.8 |
Find 141 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTCCACCAGGAGATTT+AGG | 0.197104 | 5.1:+54948958 | None:intergenic |
| TGAGAAGGGTTGGTCGAGTT+TGG | 0.212516 | 5.1:+54952612 | None:intergenic |
| GAGAAGGGTTGGTCGAGTTT+GGG | 0.222285 | 5.1:+54952613 | None:intergenic |
| GGGTTGCTGGTTTGGTCTAC+TGG | 0.259356 | 5.1:-54949018 | MS.gene57021:CDS |
| GGAGCACAACCCACCACTTT+TGG | 0.268489 | 5.1:-54949899 | MS.gene57021:CDS |
| GATTCTATGTAGCTATTAAC+TGG | 0.277448 | 5.1:-54947650 | MS.gene57021:CDS |
| GTTTCCTCAGTTGGTTTGTT+TGG | 0.290668 | 5.1:-54947713 | MS.gene57021:CDS |
| TGAGGTTCCTTACGGGTTGC+TGG | 0.305317 | 5.1:-54949031 | MS.gene57021:CDS |
| TTCCTTACGGGTTGCTGGTT+TGG | 0.310597 | 5.1:-54949026 | MS.gene57021:CDS |
| CTCTAGCAGGTTTCCTCAGT+TGG | 0.327292 | 5.1:-54947722 | MS.gene57021:CDS |
| ACCTTCCACCAGGAGATTTA+GGG | 0.336747 | 5.1:+54948959 | None:intergenic |
| TGATTTGGATGCAGGGATTT+CGG | 0.349898 | 5.1:-54949706 | MS.gene57021:intron |
| TTCTTCCTTGCTAATTGTAC+TGG | 0.351919 | 5.1:-54952267 | MS.gene57021:CDS |
| GCGAACCGGGGCGGTTGAAC+CGG | 0.365407 | 5.1:+54952542 | None:intergenic |
| AAGCCACGCGTGGTGGTTCT+TGG | 0.366491 | 5.1:-54952486 | MS.gene57021:CDS |
| GATAAGTTAGTAATTGCATT+AGG | 0.372684 | 5.1:-54949920 | MS.gene57021:CDS |
| AGATCCAGCGAGTGGATAAA+AGG | 0.389977 | 5.1:+54948982 | None:intergenic |
| GTTCTTGGCACCGGTTGGGC+CGG | 0.404559 | 5.1:-54952471 | MS.gene57021:CDS |
| GTACAAGATATCTTCTCAAT+AGG | 0.408338 | 5.1:-54948678 | MS.gene57021:CDS |
| GAATCTGCATCCGGCCCAAC+CGG | 0.410042 | 5.1:+54952461 | None:intergenic |
| CTGGTTTGGTCTACTGGAGT+TGG | 0.418407 | 5.1:-54949012 | MS.gene57021:CDS |
| TAAAGCTCACCTTTGTCAAC+TGG | 0.420834 | 5.1:+54949246 | None:intergenic |
| GCTGTTTGCACGGCCTCCAT+TGG | 0.422580 | 5.1:+54948029 | None:intergenic |
| CCGAGAGCCGCATAGCGAAC+CGG | 0.423237 | 5.1:+54952528 | None:intergenic |
| GGCTTCTCGTGTGGCTTGGT+GGG | 0.428477 | 5.1:+54952504 | None:intergenic |
| GAGAGAGAAGAGTGAGAGAT+GGG | 0.434356 | 5.1:+54952583 | None:intergenic |
| TTGATGATGTCTGACGTTCC+AGG | 0.436902 | 5.1:-54949794 | MS.gene57021:intron |
| TGCAATTACTAACTTATCAT+AGG | 0.442331 | 5.1:+54949925 | None:intergenic |
| CTGTTACATTGTGTAGTTGT+CGG | 0.443614 | 5.1:-54949666 | MS.gene57021:CDS |
| GGATGCAGGGATTTCGGAAG+AGG | 0.444020 | 5.1:-54949700 | MS.gene57021:intron |
| CGCGTGGTGGTTCTTGGCAC+CGG | 0.444708 | 5.1:-54952480 | MS.gene57021:CDS |
| CCTACGGGAGTTGAATTTAG+TGG | 0.445405 | 5.1:-54949636 | MS.gene57021:CDS |
| ATGGTACTGAGGTTCCTTAC+GGG | 0.447476 | 5.1:-54949038 | MS.gene57021:CDS |
| TGGCTTCTCGTGTGGCTTGG+TGG | 0.449102 | 5.1:+54952503 | None:intergenic |
| CGCTTCTCCACTTCAACACC+CGG | 0.450000 | 5.1:-54952561 | MS.gene57021:CDS |
| GAACACAGACACTGGATCCT+TGG | 0.451339 | 5.1:-54949961 | MS.gene57021:CDS |
| AGAGATGGGAAGAGGTGAGA+AGG | 0.451443 | 5.1:+54952597 | None:intergenic |
| ATCTAACTCGTGTCATTAGC+TGG | 0.452596 | 5.1:-54947680 | MS.gene57021:CDS |
| CGAGAGCCGCATAGCGAACC+GGG | 0.453274 | 5.1:+54952529 | None:intergenic |
| TATCCATGTTACTTTGATTG+AGG | 0.453761 | 5.1:-54949553 | MS.gene57021:intron |
| GAAGAGTGAGAGATGGGAAG+AGG | 0.457738 | 5.1:+54952589 | None:intergenic |
| CACCTTTGTCAACTGGTTGG+TGG | 0.460527 | 5.1:+54949253 | None:intergenic |
| CGAGAGAGAAGAGTGAGAGA+TGG | 0.463439 | 5.1:+54952582 | None:intergenic |
| TGGGAAGAGGTGAGAAGGGT+TGG | 0.465709 | 5.1:+54952602 | None:intergenic |
| GCAGGTTGAATCCTAGCAAC+AGG | 0.465923 | 5.1:+54952315 | None:intergenic |
| AGAAGGGTTGGTCGAGTTTG+GGG | 0.466093 | 5.1:+54952614 | None:intergenic |
| CCAGGTTCTTTGGAAATAGC+AGG | 0.466685 | 5.1:+54952297 | None:intergenic |
| GAGATGGGAAGAGGTGAGAA+GGG | 0.471329 | 5.1:+54952598 | None:intergenic |
| ATGCAGATTCATGAAAGGAT+TGG | 0.478927 | 5.1:-54952448 | MS.gene57021:CDS |
| TGGTGGTTCTTGGCACCGGT+TGG | 0.480170 | 5.1:-54952476 | MS.gene57021:CDS |
| CCGGTTCGCTATGCGGCTCT+CGG | 0.480693 | 5.1:-54952528 | MS.gene57021:CDS |
| TCCTTTCATGAATCTGCATC+CGG | 0.482533 | 5.1:+54952452 | None:intergenic |
| GGTGGTTCTTGGCACCGGTT+GGG | 0.483153 | 5.1:-54952475 | MS.gene57021:CDS |
| TTCATATTCTGCTTATATCA+CGG | 0.485820 | 5.1:+54947607 | None:intergenic |
| CAACAGTTGCCATGCTTCCA+AGG | 0.486811 | 5.1:+54947965 | None:intergenic |
| GATGGTACTGAGGTTCCTTA+CGG | 0.488055 | 5.1:-54949039 | MS.gene57021:CDS |
| TTTCTCCTACAGGATGCAAA+AGG | 0.488236 | 5.1:-54947750 | MS.gene57021:intron |
| CTTCCTTTGATGACCGACTC+AGG | 0.494060 | 5.1:-54949283 | MS.gene57021:CDS |
| TATCTTTCATGCTGTTTGCA+CGG | 0.494328 | 5.1:+54948019 | None:intergenic |
| AAAGGAAGACAATATCTCAT+TGG | 0.494833 | 5.1:+54949298 | None:intergenic |
| TAAGTTACTTGGGCAAGAGC+TGG | 0.495694 | 5.1:+54948612 | None:intergenic |
| CTGGATCTCCCTAAATCTCC+TGG | 0.496340 | 5.1:-54948967 | MS.gene57021:CDS |
| CAGTTGGTTTGTTTGGCGCT+CGG | 0.501757 | 5.1:-54947706 | MS.gene57021:CDS |
| CATTGTGTAGTTGTCGGAGG+TGG | 0.502020 | 5.1:-54949660 | MS.gene57021:CDS |
| GCAAAAGGATTGTCTCTAGC+AGG | 0.508390 | 5.1:-54947735 | MS.gene57021:CDS |
| TCGTGAAGTTTACCATGCAC+AGG | 0.511255 | 5.1:-54949843 | MS.gene57021:CDS |
| AGTGGATTTGTTGAAAGTAC+CGG | 0.512050 | 5.1:-54948648 | MS.gene57021:CDS |
| GTTGTCGGAGGTGGTCCTAC+GGG | 0.516952 | 5.1:-54949651 | MS.gene57021:CDS |
| AGCATGAAAGATATAGACTT+GGG | 0.517333 | 5.1:-54948009 | MS.gene57021:CDS |
| CAGTTTGTGTACAAGCACCT+TGG | 0.518550 | 5.1:-54947982 | MS.gene57021:CDS |
| CGAACCGGGGCGGTTGAACC+GGG | 0.524723 | 5.1:+54952543 | None:intergenic |
| AGTTGTCGGAGGTGGTCCTA+CGG | 0.526094 | 5.1:-54949652 | MS.gene57021:CDS |
| CCTGCTATTTCCAAAGAACC+TGG | 0.527740 | 5.1:-54952297 | MS.gene57021:CDS |
| TTTCGGAAGAGGAGAAGAAA+AGG | 0.527798 | 5.1:-54949689 | MS.gene57021:CDS |
| TGGGCAAGAGCTGGAAGTGT+TGG | 0.530653 | 5.1:+54948621 | None:intergenic |
| GCGTGGCTTCTCGTGTGGCT+TGG | 0.532759 | 5.1:+54952500 | None:intergenic |
| GGGTTTGAAAAGTTGTTTCG+TGG | 0.536776 | 5.1:+54952635 | None:intergenic |
| ACCACGCGTGGCTTCTCGTG+TGG | 0.538310 | 5.1:+54952495 | None:intergenic |
| GCAGCCTTGTTAAACAAAGT+AGG | 0.539948 | 5.1:-54948057 | MS.gene57021:CDS |
| CAGCATGAAAGATATAGACT+TGG | 0.541359 | 5.1:-54948010 | MS.gene57021:CDS |
| CTGTTGCTGAACCTGTTGCT+AGG | 0.543077 | 5.1:-54952326 | MS.gene57021:CDS |
| AACACCCGGTTCAACCGCCC+CGG | 0.543098 | 5.1:-54952547 | MS.gene57021:CDS |
| CTTGGAAGCATGGCAACTGT+TGG | 0.546016 | 5.1:-54947964 | MS.gene57021:CDS |
| TCAGGAGTGCGACTTGTTCG+AGG | 0.547733 | 5.1:-54949102 | MS.gene57021:CDS |
| GAGAAGATATCTTGTACTGA+AGG | 0.549464 | 5.1:+54948684 | None:intergenic |
| TGTATCCCCGCGTAATCACA+TGG | 0.555108 | 5.1:-54952400 | MS.gene57021:CDS |
| GAAGGGTTGGTCGAGTTTGG+GGG | 0.556205 | 5.1:+54952615 | None:intergenic |
| AACTCCATGAATTCCAAAAG+TGG | 0.557244 | 5.1:+54949886 | None:intergenic |
| TCCATGAATTCCAAAAGTGG+TGG | 0.567774 | 5.1:+54949889 | None:intergenic |
| TTCACCTACTTTGTTTAACA+AGG | 0.568346 | 5.1:+54948053 | None:intergenic |
| GGTTGAACCGGGTGTTGAAG+TGG | 0.572310 | 5.1:+54952554 | None:intergenic |
| AACTGAAGGAACACAGACAC+TGG | 0.572704 | 5.1:-54949969 | MS.gene57021:CDS |
| GTACAAGCACCTTGGAAGCA+TGG | 0.575288 | 5.1:-54947974 | MS.gene57021:CDS |
| TCCCTAAATCTCCTGGTGGA+AGG | 0.576208 | 5.1:-54948960 | MS.gene57021:intron |
| TAGGAGATTGTAAACTTCCA+AGG | 0.576226 | 5.1:+54949944 | None:intergenic |
| GTGCCTGAGTCGGTCATCAA+AGG | 0.577551 | 5.1:+54949280 | None:intergenic |
| CGTCAGACATCATCAAATTG+AGG | 0.578854 | 5.1:+54949801 | None:intergenic |
| TGCGACGAATTTCCTGTGCA+TGG | 0.580363 | 5.1:+54949831 | None:intergenic |
| GGCAACTGTTGGAAGTTACA+AGG | 0.589456 | 5.1:-54947953 | MS.gene57021:CDS |
| ACACAAGTAGAAGCCAAAAG+AGG | 0.590268 | 5.1:+54952369 | None:intergenic |
| AGCGAGTGGATAAAAGGTGA+TGG | 0.590313 | 5.1:+54948988 | None:intergenic |
| ACATTACCTTGTTCTGTCTG+AGG | 0.591265 | 5.1:+54947920 | None:intergenic |
| GCCGGATGCAGATTCATGAA+AGG | 0.593084 | 5.1:-54952453 | MS.gene57021:CDS |
| AACCGCCCCGGTTCGCTATG+CGG | 0.597084 | 5.1:-54952535 | MS.gene57021:CDS |
| GACCAAACCAGCAACCCGTA+AGG | 0.603661 | 5.1:+54949024 | None:intergenic |
| CCATGAATTCCAAAAGTGGT+GGG | 0.610117 | 5.1:+54949890 | None:intergenic |
| AGTAGACCTCAGACAGAACA+AGG | 0.610589 | 5.1:-54947926 | MS.gene57021:intron |
| ACAGGATCGGTATTGATGAG+TGG | 0.621936 | 5.1:-54948716 | MS.gene57021:intron |
| GCTCACCTTTGTCAACTGGT+TGG | 0.622023 | 5.1:+54949250 | None:intergenic |
| TGAAAACCATGTGATTACGC+GGG | 0.630073 | 5.1:+54952394 | None:intergenic |
| AACAAAGTAGGTGAAGCCAA+TGG | 0.630315 | 5.1:-54948045 | MS.gene57021:CDS |
| TGATACCAGTACAATTAGCA+AGG | 0.631909 | 5.1:+54952262 | None:intergenic |
| TCAGAGATATGCTCATGTGA+AGG | 0.636417 | 5.1:-54949580 | MS.gene57021:CDS |
| CCACTAAATTCAACTCCCGT+AGG | 0.642737 | 5.1:+54949636 | None:intergenic |
| GTGCCAAGAACCACCACGCG+TGG | 0.643793 | 5.1:+54952483 | None:intergenic |
| TTCTCAATAGGTGACTGCAG+TGG | 0.644093 | 5.1:-54948666 | MS.gene57021:CDS |
| ACACGAGAAGCCACGCGTGG+TGG | 0.644303 | 5.1:-54952493 | MS.gene57021:CDS |
| CAATGTGAGACTGTAACTGA+AGG | 0.645608 | 5.1:-54949983 | MS.gene57021:CDS |
| GAGGTTTCTAAACAAAGACA+TGG | 0.647360 | 5.1:+54952677 | None:intergenic |
| CCACAGGTAGCAGAGAGGCA+AGG | 0.649338 | 5.1:-54948090 | MS.gene57021:intron |
| ATTTAGGGAGATCCAGCGAG+TGG | 0.654814 | 5.1:+54948974 | None:intergenic |
| GTGAAAACCATGTGATTACG+CGG | 0.655602 | 5.1:+54952393 | None:intergenic |
| GCCACACGAGAAGCCACGCG+TGG | 0.658234 | 5.1:-54952496 | MS.gene57021:CDS |
| AGCCGCATAGCGAACCGGGG+CGG | 0.658682 | 5.1:+54952533 | None:intergenic |
| TATACTTAACGATGGTACTG+AGG | 0.661927 | 5.1:-54949049 | MS.gene57021:CDS |
| AGCGCCAAACAAACCAACTG+AGG | 0.663425 | 5.1:+54947709 | None:intergenic |
| TGCCACCAACCAGTTGACAA+AGG | 0.666218 | 5.1:-54949255 | MS.gene57021:intron |
| TATCAATGCTGATAAACATG+AGG | 0.672808 | 5.1:-54952244 | MS.gene57021:intron |
| TTACATTGTGTAGTTGTCGG+AGG | 0.672880 | 5.1:-54949663 | MS.gene57021:CDS |
| AAAGTAGGTGAAGCCAATGG+AGG | 0.673473 | 5.1:-54948042 | MS.gene57021:CDS |
| GAGTAAACAAACCTTCCACC+AGG | 0.674755 | 5.1:+54948949 | None:intergenic |
| GAAAACCATGTGATTACGCG+GGG | 0.676500 | 5.1:+54952395 | None:intergenic |
| AAGAAGATTATACTTAACGA+TGG | 0.679351 | 5.1:-54949057 | MS.gene57021:CDS |
| TGGTGGCATAGTGCCTGAGT+CGG | 0.683066 | 5.1:+54949270 | None:intergenic |
| GCATGAAAGATATAGACTTG+GGG | 0.685130 | 5.1:-54948008 | MS.gene57021:CDS |
| ATTCTATGTAGCTATTAACT+GGG | 0.685511 | 5.1:-54947649 | MS.gene57021:CDS |
| ATACCTCAATCAAAGTAACA+TGG | 0.690821 | 5.1:+54949550 | None:intergenic |
| GATCTCCCTAAATCTCCTGG+TGG | 0.696100 | 5.1:-54948964 | MS.gene57021:CDS |
| GAGAGCCGCATAGCGAACCG+GGG | 0.696948 | 5.1:+54952530 | None:intergenic |
| TAACTCGTGTCATTAGCTGG+AGG | 0.697962 | 5.1:-54947677 | MS.gene57021:CDS |
| GAATTCCACAGGTAGCAGAG+AGG | 0.742852 | 5.1:-54948095 | MS.gene57021:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATATATATATATT+TGG | + | chr5.1:54951488-54951507 | None:intergenic | 0.0% |
| !!! | TTTTATAATTGATATATTCA+GGG | + | chr5.1:54949446-54949465 | None:intergenic | 10.0% |
| !!! | TTTTTATAATTGATATATTC+AGG | + | chr5.1:54949447-54949466 | None:intergenic | 10.0% |
| !! | TTACAATTCTTATGAAAATA+GGG | - | chr5.1:54950107-54950126 | MS.gene57021:intron | 15.0% |
| !! | TTTACAATTCTTATGAAAAT+AGG | - | chr5.1:54950106-54950125 | MS.gene57021:intron | 15.0% |
| !!! | ATATAATTGATTTTAAGACT+AGG | - | chr5.1:54949033-54949052 | MS.gene57021:CDS | 15.0% |
| !! | AAATCAGTTACAGATTAAAA+AGG | + | chr5.1:54950563-54950582 | None:intergenic | 20.0% |
| !! | AACTTAATTAAGCACTTATA+AGG | + | chr5.1:54952133-54952152 | None:intergenic | 20.0% |
| !! | AATAAACCTAAAACAACTTA+TGG | + | chr5.1:54951987-54952006 | None:intergenic | 20.0% |
| !! | AATTAGCAATTAACTAATCA+AGG | - | chr5.1:54948539-54948558 | MS.gene57021:intron | 20.0% |
| !! | ATATGAAATTGAATTTCAGT+TGG | + | chr5.1:54949354-54949373 | None:intergenic | 20.0% |
| !! | ATTAAGTTAATTATCCAAAC+AGG | - | chr5.1:54952145-54952164 | MS.gene57021:intron | 20.0% |
| !! | TATGAAATTGAATTTCAGTT+GGG | + | chr5.1:54949353-54949372 | None:intergenic | 20.0% |
| !! | TGAAAATAGAAACCATTAAA+AGG | - | chr5.1:54949160-54949179 | MS.gene57021:intron | 20.0% |
| !! | TGTTACAATGATTAATTTCA+AGG | + | chr5.1:54948364-54948383 | None:intergenic | 20.0% |
| !! | TTAAGTTAATTATCCAAACA+GGG | - | chr5.1:54952146-54952165 | MS.gene57021:intron | 20.0% |
| !! | TTACAAATTTACCACAAAAT+TGG | + | chr5.1:54950888-54950907 | None:intergenic | 20.0% |
| !! | TTTATCTCTTATGATAGAAA+TGG | - | chr5.1:54952074-54952093 | MS.gene57021:intron | 20.0% |
| !! | TTTCAATTTCATTGCTTATA+TGG | - | chr5.1:54948140-54948159 | MS.gene57021:intron | 20.0% |
| !!! | TAGCATCAATTTAATTTCTA+GGG | + | chr5.1:54948313-54948332 | None:intergenic | 20.0% |
| !!! | TCTTTTTCTTTTTCTTTGTA+TGG | - | chr5.1:54948068-54948087 | MS.gene57021:CDS | 20.0% |
| !!! | TTCTTTTTGCATTTTTTGTA+AGG | - | chr5.1:54949225-54949244 | MS.gene57021:intron | 20.0% |
| !!! | TTTTAGATATTTCATTGACT+AGG | - | chr5.1:54948192-54948211 | MS.gene57021:intron | 20.0% |
| !!! | TTTTTAATCTGTAACTGATT+TGG | - | chr5.1:54950562-54950581 | MS.gene57021:intron | 20.0% |
| !!! | TTTTTTTTTTTGTAATCCGT+GGG | + | chr5.1:54948732-54948751 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTGTAATCCG+TGG | + | chr5.1:54948733-54948752 | None:intergenic | 20.0% |
| ! | AACCAAAATGACTATTTACT+CGG | + | chr5.1:54949393-54949412 | None:intergenic | 25.0% |
| ! | AAGAAGATTATACTTAACGA+TGG | - | chr5.1:54951226-54951245 | MS.gene57021:intron | 25.0% |
| ! | AAGCTTATTCATGTCAAATT+AGG | - | chr5.1:54951870-54951889 | MS.gene57021:intron | 25.0% |
| ! | AATTCTGATTCTTAGATATC+AGG | + | chr5.1:54948523-54948542 | None:intergenic | 25.0% |
| ! | ACATATTGAACAAACAGTAA+AGG | + | chr5.1:54951132-54951151 | None:intergenic | 25.0% |
| ! | ACTGTTGCAAAATTTACAAT+TGG | - | chr5.1:54951393-54951412 | MS.gene57021:intron | 25.0% |
| ! | ACTTATTTCAACTTATCTTC+CGG | - | chr5.1:54951907-54951926 | MS.gene57021:intron | 25.0% |
| ! | AGCTTATTCATGTCAAATTA+GGG | - | chr5.1:54951871-54951890 | MS.gene57021:intron | 25.0% |
| ! | ATACTTGGTTATTGTTGTAT+TGG | - | chr5.1:54949290-54949309 | MS.gene57021:CDS | 25.0% |
| ! | ATGAAATTGAATTTCAGTTG+GGG | + | chr5.1:54949352-54949371 | None:intergenic | 25.0% |
| ! | ATTCTATGTAGCTATTAACT+GGG | - | chr5.1:54952634-54952653 | MS.gene57021:CDS | 25.0% |
| ! | ATTGTAACATTGTGAATTCT+TGG | - | chr5.1:54948375-54948394 | MS.gene57021:intron | 25.0% |
| ! | CATATTGAACAAACAGTAAA+GGG | + | chr5.1:54951131-54951150 | None:intergenic | 25.0% |
| ! | GATAAGTTAGTAATTGCATT+AGG | - | chr5.1:54950363-54950382 | MS.gene57021:intron | 25.0% |
| ! | TAAATCCTCAATACATAGTT+TGG | + | chr5.1:54949002-54949021 | None:intergenic | 25.0% |
| ! | TAACTGACTAAATTGTCATT+TGG | - | chr5.1:54948229-54948248 | MS.gene57021:intron | 25.0% |
| ! | TGCAATTACTAACTTATCAT+AGG | + | chr5.1:54950361-54950380 | None:intergenic | 25.0% |
| ! | TTATATGGTTTAGTTATGGT+TGG | - | chr5.1:54948155-54948174 | MS.gene57021:intron | 25.0% |
| ! | TTCTTAATAAGAATGATGAG+TGG | - | chr5.1:54948850-54948869 | MS.gene57021:intron | 25.0% |
| ! | TTGCTTATATGGTTTAGTTA+TGG | - | chr5.1:54948151-54948170 | MS.gene57021:intron | 25.0% |
| !! | AACTGACTAAATTGTCATTT+GGG | - | chr5.1:54948230-54948249 | MS.gene57021:intron | 25.0% |
| !! | CTAGCATCAATTTAATTTCT+AGG | + | chr5.1:54948314-54948333 | None:intergenic | 25.0% |
| !! | GAAGATAAGTTGAAATAAGT+CGG | + | chr5.1:54951907-54951926 | None:intergenic | 25.0% |
| !! | TGATTTTTGTCTCAAACTTT+AGG | - | chr5.1:54948787-54948806 | MS.gene57021:intron | 25.0% |
| !! | TGTTACAATTTTGTTAGTCA+CGG | + | chr5.1:54949839-54949858 | None:intergenic | 25.0% |
| !!! | AAGCATTATTTTTCAAACAC+AGG | + | chr5.1:54950529-54950548 | None:intergenic | 25.0% |
| !!! | TGCTATTCAGTTTGTTAAAT+TGG | - | chr5.1:54949486-54949505 | MS.gene57021:intron | 25.0% |
| !!! | TTGCATTTATTTTCTTTCCA+TGG | - | chr5.1:54951367-54951386 | MS.gene57021:intron | 25.0% |
| !!! | TTGGTTTTAGTTTAACACTA+TGG | - | chr5.1:54951758-54951777 | MS.gene57021:intron | 25.0% |
| !!! | TTTTTAAAAGCACCAACAAA+AGG | + | chr5.1:54952488-54952507 | None:intergenic | 25.0% |
| AAAGGAAGACAATATCTCAT+TGG | + | chr5.1:54950988-54951007 | None:intergenic | 30.0% | |
| AACCAAGTATCTCAATAGTT+AGG | + | chr5.1:54949280-54949299 | None:intergenic | 30.0% | |
| AACTAAGTGGAATTTAGTTG+AGG | - | chr5.1:54949135-54949154 | MS.gene57021:intron | 30.0% | |
| AATATCCTAACTAAACTACC+AGG | + | chr5.1:54949989-54950008 | None:intergenic | 30.0% | |
| ACACAAGAATTGTTAGCAAT+TGG | + | chr5.1:54948640-54948659 | None:intergenic | 30.0% | |
| ACCAAAATGACTATTTACTC+GGG | + | chr5.1:54949392-54949411 | None:intergenic | 30.0% | |
| ACCAAGTATCTCAATAGTTA+GGG | + | chr5.1:54949279-54949298 | None:intergenic | 30.0% | |
| AGAAATTTCAACACAAGGAA+AGG | + | chr5.1:54951156-54951175 | None:intergenic | 30.0% | |
| AGAACAGTGTTATAAAAACC+AGG | + | chr5.1:54950150-54950169 | None:intergenic | 30.0% | |
| AGCATGAAAGATATAGACTT+GGG | - | chr5.1:54952274-54952293 | MS.gene57021:CDS | 30.0% | |
| AGTTATGGTTGGAGAAAAAA+AGG | - | chr5.1:54948166-54948185 | MS.gene57021:intron | 30.0% | |
| ATACCTCAATCAAAGTAACA+TGG | + | chr5.1:54950736-54950755 | None:intergenic | 30.0% | |
| ATCTGTATTATCATGAAAGC+AGG | - | chr5.1:54951451-54951470 | MS.gene57021:intron | 30.0% | |
| ATTCAAGTGGCAATACATTA+AGG | + | chr5.1:54952172-54952191 | None:intergenic | 30.0% | |
| ATTCAGAATGGAATGTGTTT+AGG | + | chr5.1:54951796-54951815 | None:intergenic | 30.0% | |
| ATTGCTAACAATTCTTGTGT+TGG | - | chr5.1:54948640-54948659 | MS.gene57021:CDS | 30.0% | |
| CAAGAAATGAAAGTGATCTT+TGG | + | chr5.1:54951717-54951736 | None:intergenic | 30.0% | |
| CAATATATTCCTAATAGCCT+AGG | - | chr5.1:54949894-54949913 | MS.gene57021:CDS | 30.0% | |
| CAATTTATTCATGTCTCTTC+AGG | - | chr5.1:54950962-54950981 | MS.gene57021:intron | 30.0% | |
| CTGATAGAAATTTCAACACA+AGG | + | chr5.1:54951161-54951180 | None:intergenic | 30.0% | |
| GAAACCAATGTAAGTTACTT+GGG | + | chr5.1:54951684-54951703 | None:intergenic | 30.0% | |
| GATTCTATGTAGCTATTAAC+TGG | - | chr5.1:54952633-54952652 | MS.gene57021:CDS | 30.0% | |
| GTATGGTATCTAAGCTTATT+TGG | - | chr5.1:54948085-54948104 | MS.gene57021:CDS | 30.0% | |
| GTGATTCTTACTTTACAAGT+TGG | - | chr5.1:54948477-54948496 | MS.gene57021:intron | 30.0% | |
| GTTATGGTTGGAGAAAAAAA+GGG | - | chr5.1:54948167-54948186 | MS.gene57021:intron | 30.0% | |
| TAAATTCCAAATCCCAAACA+AGG | + | chr5.1:54949188-54949207 | None:intergenic | 30.0% | |
| TAACATTGTGAATTCTTGGT+TGG | - | chr5.1:54948379-54948398 | MS.gene57021:intron | 30.0% | |
| TAATAAGAATGATGAGTGGT+TGG | - | chr5.1:54948854-54948873 | MS.gene57021:intron | 30.0% | |
| TATCAATGCTGATAAACATG+AGG | - | chr5.1:54948039-54948058 | MS.gene57021:CDS | 30.0% | |
| TGAAACCAATGTAAGTTACT+TGG | + | chr5.1:54951685-54951704 | None:intergenic | 30.0% | |
| TGGTTGTTTAATATGTCTGA+TGG | - | chr5.1:54949408-54949427 | MS.gene57021:intron | 30.0% | |
| TGTAACAGAATTCTGACTTT+GGG | - | chr5.1:54949852-54949871 | MS.gene57021:CDS | 30.0% | |
| TGTTGAAATTTCTATCAGTC+AGG | - | chr5.1:54951163-54951182 | MS.gene57021:intron | 30.0% | |
| TTAGACAGCAATGAACAAAA+GGG | - | chr5.1:54950196-54950215 | MS.gene57021:intron | 30.0% | |
| TTCAGAATGGAATGTGTTTA+GGG | + | chr5.1:54951795-54951814 | None:intergenic | 30.0% | |
| TTGCTAACAATTCTTGTGTT+GGG | - | chr5.1:54948641-54948660 | MS.gene57021:CDS | 30.0% | |
| TTGTAACAGAATTCTGACTT+TGG | - | chr5.1:54949851-54949870 | MS.gene57021:CDS | 30.0% | |
| TTTAGACAGCAATGAACAAA+AGG | - | chr5.1:54950195-54950214 | MS.gene57021:intron | 30.0% | |
| TTTATTTCCATAAGTTCTCC+AGG | - | chr5.1:54952001-54952020 | MS.gene57021:intron | 30.0% | |
| TTTGACATGAATAAGCTTTC+AGG | + | chr5.1:54951868-54951887 | None:intergenic | 30.0% | |
| ! | AATGTGTTACTCTCTTTACT+TGG | - | chr5.1:54951813-54951832 | MS.gene57021:intron | 30.0% |
| ! | TTCACCTACTTTGTTTAACA+AGG | + | chr5.1:54952233-54952252 | None:intergenic | 30.0% |
| ! | TTTTGTTCATTGCTGTCTAA+AGG | + | chr5.1:54950196-54950215 | None:intergenic | 30.0% |
| !! | CATTAAAAGGTACCTTGTTT+GGG | - | chr5.1:54949173-54949192 | MS.gene57021:intron | 30.0% |
| !! | TAGAATGTTCTGAAACTAAG+TGG | - | chr5.1:54949122-54949141 | MS.gene57021:intron | 30.0% |
| !! | TATCCATGTTACTTTGATTG+AGG | - | chr5.1:54950730-54950749 | MS.gene57021:intron | 30.0% |
| !! | TGAAGAAGTAACTTTTTGAG+AGG | + | chr5.1:54947628-54947647 | None:intergenic | 30.0% |
| !!! | GACTTTTTCGTGATATTCAT+AGG | + | chr5.1:54951109-54951128 | None:intergenic | 30.0% |
| !!! | TACTTTACAAGTTGGTTTTG+AGG | - | chr5.1:54948485-54948504 | MS.gene57021:intron | 30.0% |
| !!! | TGTGTTTTAGTTTGTCAGTT+TGG | - | chr5.1:54949521-54949540 | MS.gene57021:intron | 30.0% |
| AAAACTACATTCCATAGCTG+TGG | - | chr5.1:54950034-54950053 | MS.gene57021:intron | 35.0% | |
| AAACACTTGTGAGACTGTTT+AGG | - | chr5.1:54951933-54951952 | MS.gene57021:intron | 35.0% | |
| AAATGACTATTTACTCGGGT+TGG | + | chr5.1:54949388-54949407 | None:intergenic | 35.0% | |
| AACACAATGATTACTCGGTT+TGG | + | chr5.1:54949965-54949984 | None:intergenic | 35.0% | |
| AACATTGTGACTTCTTCGTT+GGG | - | chr5.1:54949564-54949583 | MS.gene57021:CDS | 35.0% | |
| AACTCCATGAATTCCAAAAG+TGG | + | chr5.1:54950400-54950419 | None:intergenic | 35.0% | |
| AATAGTTAGGGTAGGATGAA+AGG | + | chr5.1:54949267-54949286 | None:intergenic | 35.0% | |
| AATCACAGTGCAGCTTAATT+TGG | - | chr5.1:54950249-54950268 | MS.gene57021:intron | 35.0% | |
| ACCCTAACTATTGAGATACT+TGG | - | chr5.1:54949275-54949294 | MS.gene57021:CDS | 35.0% | |
| AGAGAGTAACACATTCAGAA+TGG | + | chr5.1:54951808-54951827 | None:intergenic | 35.0% | |
| AGTATCTCAATAGTTAGGGT+AGG | + | chr5.1:54949275-54949294 | None:intergenic | 35.0% | |
| AGTATGTGTCTTTCGTTTGT+CGG | - | chr5.1:54948332-54948351 | MS.gene57021:intron | 35.0% | |
| AGTCTCACAAGTGTTTATAC+CGG | + | chr5.1:54951929-54951948 | None:intergenic | 35.0% | |
| ATAGCAAAAGACGCATTTGA+AGG | + | chr5.1:54949472-54949491 | None:intergenic | 35.0% | |
| ATCACAGTGCAGCTTAATTT+GGG | - | chr5.1:54950250-54950269 | MS.gene57021:intron | 35.0% | |
| ATGAATAAGCTTTCAGGCAA+AGG | + | chr5.1:54951862-54951881 | None:intergenic | 35.0% | |
| ATGCAGATTCATGAAAGGAT+TGG | - | chr5.1:54947835-54947854 | MS.gene57021:intron | 35.0% | |
| ATGTTGATGTGACTATGATG+TGG | - | chr5.1:54948897-54948916 | MS.gene57021:intron | 35.0% | |
| ATTGAACCTAAGACTTTGAG+AGG | + | chr5.1:54948613-54948632 | None:intergenic | 35.0% | |
| ATTGTGAATTCTTGGTTGGA+GGG | - | chr5.1:54948383-54948402 | MS.gene57021:intron | 35.0% | |
| CAAGAATTGTTAGCAATTGG+AGG | + | chr5.1:54948637-54948656 | None:intergenic | 35.0% | |
| CAGCATGAAAGATATAGACT+TGG | - | chr5.1:54952273-54952292 | MS.gene57021:CDS | 35.0% | |
| CAGGAAACACAATGATTACT+CGG | + | chr5.1:54949970-54949989 | None:intergenic | 35.0% | |
| CTGAGATGCATAGAAAGTAA+TGG | - | chr5.1:54949678-54949697 | MS.gene57021:CDS | 35.0% | |
| CTGTTACATTGTGTAGTTGT+CGG | - | chr5.1:54950617-54950636 | MS.gene57021:intron | 35.0% | |
| CTTATTTGGACATGTCTATC+AGG | - | chr5.1:54948099-54948118 | MS.gene57021:intron | 35.0% | |
| GAAAAAAGAACCAGGTTCTT+TGG | + | chr5.1:54947999-54948018 | None:intergenic | 35.0% | |
| GATATATTCAGGGACTATAG+TGG | + | chr5.1:54949436-54949455 | None:intergenic | 35.0% | |
| GCATAGTATCCAAGTACAAA+GGG | - | chr5.1:54952429-54952448 | MS.gene57021:CDS | 35.0% | |
| GCATGAAAGATATAGACTTG+GGG | - | chr5.1:54952275-54952294 | MS.gene57021:CDS | 35.0% | |
| GTCATAACTCTAAGCAACAA+GGG | + | chr5.1:54949617-54949636 | None:intergenic | 35.0% | |
| TAACATTGTGACTTCTTCGT+TGG | - | chr5.1:54949563-54949582 | MS.gene57021:CDS | 35.0% | |
| TAAGCCTCAACAAAAGGTTA+AGG | + | chr5.1:54952397-54952416 | None:intergenic | 35.0% | |
| TAGGAGATTGTAAACTTCCA+AGG | + | chr5.1:54950342-54950361 | None:intergenic | 35.0% | |
| TATACTTAACGATGGTACTG+AGG | - | chr5.1:54951234-54951253 | MS.gene57021:intron | 35.0% | |
| TGAATTGCTGACAATGACAA+CGG | + | chr5.1:54950821-54950840 | None:intergenic | 35.0% | |
| TGATACCAGTACAATTAGCA+AGG | + | chr5.1:54948024-54948043 | None:intergenic | 35.0% | |
| TGTCATAACTCTAAGCAACA+AGG | + | chr5.1:54949618-54949637 | None:intergenic | 35.0% | |
| TGTTTCCTGGTAGTTTAGTT+AGG | - | chr5.1:54949981-54950000 | MS.gene57021:CDS | 35.0% | |
| TTACTCTCTTTACTTGGTAG+AGG | - | chr5.1:54951819-54951838 | MS.gene57021:intron | 35.0% | |
| TTCTTCCTTGCTAATTGTAC+TGG | - | chr5.1:54948016-54948035 | MS.gene57021:CDS | 35.0% | |
| TTGAATTCCTGACAATGTGT+AGG | - | chr5.1:54951734-54951753 | MS.gene57021:intron | 35.0% | |
| TTGCTGCTAAGAAAGAAGAT+GGG | - | chr5.1:54949926-54949945 | MS.gene57021:CDS | 35.0% | |
| TTTGCTGCTAAGAAAGAAGA+TGG | - | chr5.1:54949925-54949944 | MS.gene57021:CDS | 35.0% | |
| ! | AACCAGAACAAAGCTTTGTA+TGG | + | chr5.1:54948672-54948691 | None:intergenic | 35.0% |
| ! | AATTTTGCAACAGTTGTCCA+TGG | + | chr5.1:54951387-54951406 | None:intergenic | 35.0% |
| ! | ACCCGAGTAAATAGTCATTT+TGG | - | chr5.1:54949388-54949407 | MS.gene57021:intron | 35.0% |
| ! | AGAATTCTGACTTTGGGAAA+AGG | - | chr5.1:54949858-54949877 | MS.gene57021:CDS | 35.0% |
| ! | ATTGGCAGCTGATTTCTATA+TGG | - | chr5.1:54951411-54951430 | MS.gene57021:intron | 35.0% |
| ! | ATTGGCTTCTATGAACTCTA+AGG | + | chr5.1:54950870-54950889 | None:intergenic | 35.0% |
| ! | CAATTTTGTTAGTCACGGTT+AGG | + | chr5.1:54949834-54949853 | None:intergenic | 35.0% |
| ! | CATTCCTTAACCTTTTGTTG+AGG | - | chr5.1:54952390-54952409 | MS.gene57021:CDS | 35.0% |
| ! | GAATTCTGACTTTGGGAAAA+GGG | - | chr5.1:54949859-54949878 | MS.gene57021:CDS | 35.0% |
| ! | GTTCATAGAAGCCAATTTTG+TGG | - | chr5.1:54950874-54950893 | MS.gene57021:intron | 35.0% |
| ! | TATCTTTCATGCTGTTTGCA+CGG | + | chr5.1:54952267-54952286 | None:intergenic | 35.0% |
| ! | TGAGTTACGACTTTTGCATT+TGG | - | chr5.1:54948936-54948955 | MS.gene57021:intron | 35.0% |
| ! | TTCACTAACTTTTCTCCTAC+AGG | - | chr5.1:54952523-54952542 | MS.gene57021:CDS | 35.0% |
| ! | TTGGCAGCTGATTTCTATAT+GGG | - | chr5.1:54951412-54951431 | MS.gene57021:intron | 35.0% |
| ! | TTTGTCTCAAACTTTAGGAG+TGG | - | chr5.1:54948792-54948811 | MS.gene57021:intron | 35.0% |
| !! | AGTGGATTTGTTGAAAGTAC+CGG | - | chr5.1:54951635-54951654 | MS.gene57021:intron | 35.0% |
| !! | CCAAACAAGGTACCTTTTAA+TGG | + | chr5.1:54949175-54949194 | None:intergenic | 35.0% |
| !! | CCATTAAAAGGTACCTTGTT+TGG | - | chr5.1:54949172-54949191 | MS.gene57021:intron | 35.0% |
| !! | GCATGTCCATAAGTTGTTTT+AGG | - | chr5.1:54951978-54951997 | MS.gene57021:intron | 35.0% |
| !!! | AGTCTGACACATTGTTTTGA+AGG | - | chr5.1:54950275-54950294 | MS.gene57021:intron | 35.0% |
| !!! | TGGGCTACAACTTTTGTTTT+TGG | - | chr5.1:54952653-54952672 | MS.gene57021:CDS | 35.0% |
| AAACCAAGTCCTAGGCTATT+AGG | + | chr5.1:54949906-54949925 | None:intergenic | 40.0% | |
| AACAAAGTAGGTGAAGCCAA+TGG | - | chr5.1:54952238-54952257 | MS.gene57021:intron | 40.0% | |
| AACCAAACCTACACATTGTC+AGG | + | chr5.1:54951744-54951763 | None:intergenic | 40.0% | |
| AAGCTATCCTGGAGAACTTA+TGG | + | chr5.1:54952011-54952030 | None:intergenic | 40.0% | |
| AAGTTCTCTCTTCACAGGAT+CGG | - | chr5.1:54951554-54951573 | MS.gene57021:intron | 40.0% | |
| ACACAAGTAGAAGCCAAAAG+AGG | + | chr5.1:54947917-54947936 | None:intergenic | 40.0% | |
| ACATTACCTTGTTCTGTCTG+AGG | + | chr5.1:54952366-54952385 | None:intergenic | 40.0% | |
| ACCAGATAAGCCTCAACAAA+AGG | + | chr5.1:54952403-54952422 | None:intergenic | 40.0% | |
| AGACTGTTTAGGAGAGCTTA+TGG | - | chr5.1:54951944-54951963 | MS.gene57021:intron | 40.0% | |
| ATATGTAAACCCCCAAGCAT+TGG | - | chr5.1:54948567-54948586 | MS.gene57021:intron | 40.0% | |
| ATTCCTAATAGCCTAGGACT+TGG | - | chr5.1:54949900-54949919 | MS.gene57021:CDS | 40.0% | |
| CAATACATTAAGGCCCTGTT+TGG | + | chr5.1:54952162-54952181 | None:intergenic | 40.0% | |
| CAATGTGAGACTGTAACTGA+AGG | - | chr5.1:54950300-54950319 | MS.gene57021:intron | 40.0% | |
| CAGGAAAATTATCCCAAACC+TGG | + | chr5.1:54950510-54950529 | None:intergenic | 40.0% | |
| CATTGTGAATTCTTGGTTGG+AGG | - | chr5.1:54948382-54948401 | MS.gene57021:intron | 40.0% | |
| CCATGAATTCCAAAAGTGGT+GGG | + | chr5.1:54950396-54950415 | None:intergenic | 40.0% | |
| CGAGTAATCATTGTGTTTCC+TGG | - | chr5.1:54949968-54949987 | MS.gene57021:CDS | 40.0% | |
| CGCATAGTATCCAAGTACAA+AGG | - | chr5.1:54952428-54952447 | MS.gene57021:CDS | 40.0% | |
| CGTCAGACATCATCAAATTG+AGG | + | chr5.1:54950485-54950504 | None:intergenic | 40.0% | |
| CTCAATACATAGTTTGGCAG+AGG | + | chr5.1:54948996-54949015 | None:intergenic | 40.0% | |
| CTCTGCCAAACTATGTATTG+AGG | - | chr5.1:54948994-54949013 | MS.gene57021:CDS | 40.0% | |
| CTTCGTTGGGTGTTCATTAT+TGG | - | chr5.1:54949577-54949596 | MS.gene57021:CDS | 40.0% | |
| CTTGCCCAAGTAACTTACAT+TGG | - | chr5.1:54951677-54951696 | MS.gene57021:intron | 40.0% | |
| GCAAGGAAGAAAAAAGAACC+AGG | + | chr5.1:54948007-54948026 | None:intergenic | 40.0% | |
| GTACAAAGTTCTCTCTTCAC+AGG | - | chr5.1:54951549-54951568 | MS.gene57021:intron | 40.0% | |
| GTGAAAACCATGTGATTACG+CGG | + | chr5.1:54947893-54947912 | None:intergenic | 40.0% | |
| TAAAGCTCACCTTTGTCAAC+TGG | + | chr5.1:54951040-54951059 | None:intergenic | 40.0% | |
| TCAGAGATATGCTCATGTGA+AGG | - | chr5.1:54950703-54950722 | MS.gene57021:intron | 40.0% | |
| TCATGAAAGCAGGATCACAT+TGG | - | chr5.1:54951461-54951480 | MS.gene57021:intron | 40.0% | |
| TCCATGAATTCCAAAAGTGG+TGG | + | chr5.1:54950397-54950416 | None:intergenic | 40.0% | |
| TCCTTTCATGAATCTGCATC+CGG | + | chr5.1:54947834-54947853 | None:intergenic | 40.0% | |
| TGAAAACCATGTGATTACGC+GGG | + | chr5.1:54947892-54947911 | None:intergenic | 40.0% | |
| TGCTGCTAAGAAAGAAGATG+GGG | - | chr5.1:54949927-54949946 | MS.gene57021:CDS | 40.0% | |
| TGGAGAAAAGCTTAAACTGC+AGG | - | chr5.1:54948413-54948432 | MS.gene57021:intron | 40.0% | |
| TTACATTGTGTAGTTGTCGG+AGG | - | chr5.1:54950620-54950639 | MS.gene57021:intron | 40.0% | |
| TTCCTGACAATGTGTAGGTT+TGG | - | chr5.1:54951739-54951758 | MS.gene57021:intron | 40.0% | |
| TTTCGGAAGAGGAGAAGAAA+AGG | - | chr5.1:54950594-54950613 | MS.gene57021:intron | 40.0% | |
| TTTCTCCTACAGGATGCAAA+AGG | - | chr5.1:54952533-54952552 | MS.gene57021:CDS | 40.0% | |
| ! | AAGGTACCTTGTTTGGGATT+TGG | - | chr5.1:54949179-54949198 | MS.gene57021:intron | 40.0% |
| ! | ACAATCCTTTTGCATCCTGT+AGG | + | chr5.1:54952541-54952560 | None:intergenic | 40.0% |
| ! | ACCTTTTGTTGAGGCTTATC+TGG | - | chr5.1:54952399-54952418 | MS.gene57021:CDS | 40.0% |
| ! | ATCTAACTCGTGTCATTAGC+TGG | - | chr5.1:54952603-54952622 | MS.gene57021:CDS | 40.0% |
| ! | CATGGTTTTCACACCTCTTT+TGG | - | chr5.1:54947901-54947920 | MS.gene57021:intron | 40.0% |
| ! | GGGTTTGAAAAGTTGTTTCG+TGG | + | chr5.1:54947651-54947670 | None:intergenic | 40.0% |
| ! | TATTGCCACTTGAATTCCAC+AGG | - | chr5.1:54952177-54952196 | MS.gene57021:intron | 40.0% |
| ! | TGATTTGCATAAGAGCACAG+TGG | - | chr5.1:54949764-54949783 | MS.gene57021:intron | 40.0% |
| ! | TGATTTGGATGCAGGGATTT+CGG | - | chr5.1:54950577-54950596 | MS.gene57021:intron | 40.0% |
| ! | TGTGCTGCAAAATGCGTTTT+TGG | - | chr5.1:54949060-54949079 | MS.gene57021:CDS | 40.0% |
| !! | CTGTAACTGATTTGGATGCA+GGG | - | chr5.1:54950570-54950589 | MS.gene57021:intron | 40.0% |
| !! | GACCATACAAAGCTTTGTTC+TGG | - | chr5.1:54948667-54948686 | MS.gene57021:CDS | 40.0% |
| !! | GCAGCCTTGTTAAACAAAGT+AGG | - | chr5.1:54952226-54952245 | MS.gene57021:intron | 40.0% |
| !! | GTTTCCTCAGTTGGTTTGTT+TGG | - | chr5.1:54952570-54952589 | MS.gene57021:CDS | 40.0% |
| !! | TCTGTAACTGATTTGGATGC+AGG | - | chr5.1:54950569-54950588 | MS.gene57021:intron | 40.0% |
| !!! | CTTTTGGCTTCTACTTGTGT+TGG | - | chr5.1:54947917-54947936 | MS.gene57021:intron | 40.0% |
| AAAGTAGGTGAAGCCAATGG+AGG | - | chr5.1:54952241-54952260 | MS.gene57021:intron | 45.0% | |
| AACCTTCCACCAGGAGATTT+AGG | + | chr5.1:54951328-54951347 | None:intergenic | 45.0% | |
| AACTGAAGGAACACAGACAC+TGG | - | chr5.1:54950314-54950333 | MS.gene57021:intron | 45.0% | |
| AATCCCACCGCTAACTAACA+GGG | + | chr5.1:54948706-54948725 | None:intergenic | 45.0% | |
| ACATCACCAGACCAATGCTT+GGG | + | chr5.1:54948581-54948600 | None:intergenic | 45.0% | |
| ACCTTCCACCAGGAGATTTA+GGG | + | chr5.1:54951327-54951346 | None:intergenic | 45.0% | |
| AGATCCAGCGAGTGGATAAA+AGG | + | chr5.1:54951304-54951323 | None:intergenic | 45.0% | |
| AGCAGCAAAAACCAAGTCCT+AGG | + | chr5.1:54949914-54949933 | None:intergenic | 45.0% | |
| AGCGAGTGGATAAAAGGTGA+TGG | + | chr5.1:54951298-54951317 | None:intergenic | 45.0% | |
| AGTAGACCTCAGACAGAACA+AGG | - | chr5.1:54952357-54952376 | MS.gene57021:CDS | 45.0% | |
| ATCGCTCCTCTCAAAGTCTT+AGG | - | chr5.1:54948604-54948623 | MS.gene57021:intron | 45.0% | |
| ATGTCTGACGTTCCAGGTTT+GGG | - | chr5.1:54950495-54950514 | MS.gene57021:intron | 45.0% | |
| CAGTTTGTGTACAAGCACCT+TGG | - | chr5.1:54952301-54952320 | MS.gene57021:CDS | 45.0% | |
| CCACTAAATTCAACTCCCGT+AGG | + | chr5.1:54950650-54950669 | None:intergenic | 45.0% | |
| CCTACGGGAGTTGAATTTAG+TGG | - | chr5.1:54950647-54950666 | MS.gene57021:intron | 45.0% | |
| CTTATCTGTGCTCGACCTAA+AGG | - | chr5.1:54952461-54952480 | MS.gene57021:CDS | 45.0% | |
| GAAAACCATGTGATTACGCG+GGG | + | chr5.1:54947891-54947910 | None:intergenic | 45.0% | |
| GAGAGAGAAGAGTGAGAGAT+GGG | + | chr5.1:54947703-54947722 | None:intergenic | 45.0% | |
| GAGTAAACAAACCTTCCACC+AGG | + | chr5.1:54951337-54951356 | None:intergenic | 45.0% | |
| GCAAAAGGATTGTCTCTAGC+AGG | - | chr5.1:54952548-54952567 | MS.gene57021:CDS | 45.0% | |
| GCACCAACAAAAGGACCTTT+AGG | + | chr5.1:54952479-54952498 | None:intergenic | 45.0% | |
| GGCAACTGTTGGAAGTTACA+AGG | - | chr5.1:54952330-54952349 | MS.gene57021:CDS | 45.0% | |
| TAAGTTACTTGGGCAAGAGC+TGG | + | chr5.1:54951674-54951693 | None:intergenic | 45.0% | |
| TAATCCCACCGCTAACTAAC+AGG | + | chr5.1:54948707-54948726 | None:intergenic | 45.0% | |
| TACATCACCAGACCAATGCT+TGG | + | chr5.1:54948582-54948601 | None:intergenic | 45.0% | |
| TCGAGCACAGATAAGTCTAG+TGG | + | chr5.1:54952456-54952475 | None:intergenic | 45.0% | |
| TCGTGAAGTTTACCATGCAC+AGG | - | chr5.1:54950440-54950459 | MS.gene57021:intron | 45.0% | |
| TCTAGTGGTCCCTTTGTACT+TGG | + | chr5.1:54952441-54952460 | None:intergenic | 45.0% | |
| TGCTACCTGTGGAATTCAAG+TGG | + | chr5.1:54952185-54952204 | None:intergenic | 45.0% | |
| TTCTCAATAGGTGACTGCAG+TGG | - | chr5.1:54951617-54951636 | MS.gene57021:intron | 45.0% | |
| ! | ATCACCTTTTATCCACTCGC+TGG | - | chr5.1:54951297-54951316 | MS.gene57021:intron | 45.0% |
| ! | ATGGTACTGAGGTTCCTTAC+GGG | - | chr5.1:54951245-54951264 | MS.gene57021:intron | 45.0% |
| ! | CCAGGTTCTTTGGAAATAGC+AGG | + | chr5.1:54947989-54948008 | None:intergenic | 45.0% |
| ! | CGACCTAAAGGTCCTTTTGT+TGG | - | chr5.1:54952473-54952492 | MS.gene57021:CDS | 45.0% |
| ! | GATGGTACTGAGGTTCCTTA+CGG | - | chr5.1:54951244-54951263 | MS.gene57021:intron | 45.0% |
| ! | GCTGCTTTCATAAGCTATCC+TGG | + | chr5.1:54952022-54952041 | None:intergenic | 45.0% |
| ! | GTCTCAAACTTTAGGAGTGG+TGG | - | chr5.1:54948795-54948814 | MS.gene57021:intron | 45.0% |
| ! | GTGAAACATCGTCACTTTCC+TGG | - | chr5.1:54950129-54950148 | MS.gene57021:intron | 45.0% |
| ! | GTGTCTTTCGTTTGTCGGTT+TGG | - | chr5.1:54948337-54948356 | MS.gene57021:intron | 45.0% |
| ! | TAACTCGTGTCATTAGCTGG+AGG | - | chr5.1:54952606-54952625 | MS.gene57021:CDS | 45.0% |
| !! | AAGCATTGGTCTGGTGATGT+AGG | - | chr5.1:54948581-54948600 | MS.gene57021:intron | 45.0% |
| !! | ACAGGATCGGTATTGATGAG+TGG | - | chr5.1:54951567-54951586 | MS.gene57021:intron | 45.0% |
| !! | CCTGCTATTTCCAAAGAACC+TGG | - | chr5.1:54947986-54948005 | MS.gene57021:CDS | 45.0% |
| !! | TTGATGATGTCTGACGTTCC+AGG | - | chr5.1:54950489-54950508 | MS.gene57021:intron | 45.0% |
| !!! | AGCTGGAAGTGTTGGTTTTC+CGG | + | chr5.1:54951657-54951676 | None:intergenic | 45.0% |
| !!! | CCCACCACTTTTGGAATTCA+TGG | - | chr5.1:54950393-54950412 | MS.gene57021:intron | 45.0% |
| AGAGATGGGAAGAGGTGAGA+AGG | + | chr5.1:54947689-54947708 | None:intergenic | 50.0% | |
| AGCGCCAAACAAACCAACTG+AGG | + | chr5.1:54952577-54952596 | None:intergenic | 50.0% | |
| ATCACCAGACCAATGCTTGG+GGG | + | chr5.1:54948579-54948598 | None:intergenic | 50.0% | |
| ATCCCACCGCTAACTAACAG+GGG | + | chr5.1:54948705-54948724 | None:intergenic | 50.0% | |
| ATTTAGGGAGATCCAGCGAG+TGG | + | chr5.1:54951312-54951331 | None:intergenic | 50.0% | |
| CAACAGTTGCCATGCTTCCA+AGG | + | chr5.1:54952321-54952340 | None:intergenic | 50.0% | |
| CACCTTTGTCAACTGGTTGG+TGG | + | chr5.1:54951033-54951052 | None:intergenic | 50.0% | |
| CATCACCAGACCAATGCTTG+GGG | + | chr5.1:54948580-54948599 | None:intergenic | 50.0% | |
| CATTGTGTAGTTGTCGGAGG+TGG | - | chr5.1:54950623-54950642 | MS.gene57021:intron | 50.0% | |
| CGAGAGAGAAGAGTGAGAGA+TGG | + | chr5.1:54947704-54947723 | None:intergenic | 50.0% | |
| CTCTAGCAGGTTTCCTCAGT+TGG | - | chr5.1:54952561-54952580 | MS.gene57021:CDS | 50.0% | |
| CTGGATCTCCCTAAATCTCC+TGG | - | chr5.1:54951316-54951335 | MS.gene57021:intron | 50.0% | |
| CTGTTGCTGAACCTGTTGCT+AGG | - | chr5.1:54947957-54947976 | MS.gene57021:CDS | 50.0% | |
| CTTGGTTGGAGGGTCATTGT+TGG | - | chr5.1:54948393-54948412 | MS.gene57021:intron | 50.0% | |
| GAACACAGACACTGGATCCT+TGG | - | chr5.1:54950322-54950341 | MS.gene57021:intron | 50.0% | |
| GAAGAGTGAGAGATGGGAAG+AGG | + | chr5.1:54947697-54947716 | None:intergenic | 50.0% | |
| GAATTCCACAGGTAGCAGAG+AGG | - | chr5.1:54952188-54952207 | MS.gene57021:intron | 50.0% | |
| GAGATGGGAAGAGGTGAGAA+GGG | + | chr5.1:54947688-54947707 | None:intergenic | 50.0% | |
| GATCTCCCTAAATCTCCTGG+TGG | - | chr5.1:54951319-54951338 | MS.gene57021:intron | 50.0% | |
| GATGTCTGACGTTCCAGGTT+TGG | - | chr5.1:54950494-54950513 | MS.gene57021:intron | 50.0% | |
| GCCGGATGCAGATTCATGAA+AGG | - | chr5.1:54947830-54947849 | MS.gene57021:intron | 50.0% | |
| GCTCACCTTTGTCAACTGGT+TGG | + | chr5.1:54951036-54951055 | None:intergenic | 50.0% | |
| GTACAAGCACCTTGGAAGCA+TGG | - | chr5.1:54952309-54952328 | MS.gene57021:CDS | 50.0% | |
| TCCCTAAATCTCCTGGTGGA+AGG | - | chr5.1:54951323-54951342 | MS.gene57021:intron | 50.0% | |
| TGCCACCAACCAGTTGACAA+AGG | - | chr5.1:54951028-54951047 | MS.gene57021:intron | 50.0% | |
| TGCGACGAATTTCCTGTGCA+TGG | + | chr5.1:54950455-54950474 | None:intergenic | 50.0% | |
| TGTATCCCCGCGTAATCACA+TGG | - | chr5.1:54947883-54947902 | MS.gene57021:intron | 50.0% | |
| TTGACCCCCCTGTTAGTTAG+CGG | - | chr5.1:54948696-54948715 | MS.gene57021:CDS | 50.0% | |
| ! | CTTCCTTTGATGACCGACTC+AGG | - | chr5.1:54951000-54951019 | MS.gene57021:intron | 50.0% |
| ! | CTTGGAAGCATGGCAACTGT+TGG | - | chr5.1:54952319-54952338 | MS.gene57021:CDS | 50.0% |
| ! | GCAGGTTGAATCCTAGCAAC+AGG | + | chr5.1:54947971-54947990 | None:intergenic | 50.0% |
| ! | TTCCTTACGGGTTGCTGGTT+TGG | - | chr5.1:54951257-54951276 | MS.gene57021:intron | 50.0% |
| !! | AGAAGGGTTGGTCGAGTTTG+GGG | + | chr5.1:54947672-54947691 | None:intergenic | 50.0% |
| !! | CAGTTGGTTTGTTTGGCGCT+CGG | - | chr5.1:54952577-54952596 | MS.gene57021:CDS | 50.0% |
| !! | CTGGTTTGGTCTACTGGAGT+TGG | - | chr5.1:54951271-54951290 | MS.gene57021:intron | 50.0% |
| !! | GAGAAGGGTTGGTCGAGTTT+GGG | + | chr5.1:54947673-54947692 | None:intergenic | 50.0% |
| !! | TAAACCCCCAAGCATTGGTC+TGG | - | chr5.1:54948572-54948591 | MS.gene57021:intron | 50.0% |
| !! | TGAGAAGGGTTGGTCGAGTT+TGG | + | chr5.1:54947674-54947693 | None:intergenic | 50.0% |
| AGTTGTCGGAGGTGGTCCTA+CGG | - | chr5.1:54950631-54950650 | MS.gene57021:intron | 55.0% | |
| CAGTTGGGGCTTTCAGTGTC+AGG | + | chr5.1:54949338-54949357 | None:intergenic | 55.0% | |
| CGCTTCTCCACTTCAACACC+CGG | - | chr5.1:54947722-54947741 | MS.gene57021:CDS | 55.0% | |
| GACCAAACCAGCAACCCGTA+AGG | + | chr5.1:54951262-54951281 | None:intergenic | 55.0% | |
| GCACGACAGTACCACAGCTA+TGG | + | chr5.1:54950048-54950067 | None:intergenic | 55.0% | |
| GGATGCAGGGATTTCGGAAG+AGG | - | chr5.1:54950583-54950602 | MS.gene57021:intron | 55.0% | |
| GTGCCTGAGTCGGTCATCAA+AGG | + | chr5.1:54951006-54951025 | None:intergenic | 55.0% | |
| TCCCACCGCTAACTAACAGG+GGG | + | chr5.1:54948704-54948723 | None:intergenic | 55.0% | |
| TGGGAAGAGGTGAGAAGGGT+TGG | + | chr5.1:54947684-54947703 | None:intergenic | 55.0% | |
| TGGTGGCATAGTGCCTGAGT+CGG | + | chr5.1:54951016-54951035 | None:intergenic | 55.0% | |
| ! | GGAGCACAACCCACCACTTT+TGG | - | chr5.1:54950384-54950403 | MS.gene57021:intron | 55.0% |
| ! | TCAGGAGTGCGACTTGTTCG+AGG | - | chr5.1:54951181-54951200 | MS.gene57021:intron | 55.0% |
| ! | TGAGGTTCCTTACGGGTTGC+TGG | - | chr5.1:54951252-54951271 | MS.gene57021:intron | 55.0% |
| ! | TGGGCAAGAGCTGGAAGTGT+TGG | + | chr5.1:54951665-54951684 | None:intergenic | 55.0% |
| !! | GAAGGGTTGGTCGAGTTTGG+GGG | + | chr5.1:54947671-54947690 | None:intergenic | 55.0% |
| !! | GGGTTGCTGGTTTGGTCTAC+TGG | - | chr5.1:54951265-54951284 | MS.gene57021:intron | 55.0% |
| !! | GGTTGAACCGGGTGTTGAAG+TGG | + | chr5.1:54947732-54947751 | None:intergenic | 55.0% |
| !! | TAGCGGTGGGATTAGTCCCA+CGG | - | chr5.1:54948713-54948732 | MS.gene57021:CDS | 55.0% |
| AAGCCACGCGTGGTGGTTCT+TGG | - | chr5.1:54947797-54947816 | MS.gene57021:intron | 60.0% | |
| ACCCCCCTGTTAGTTAGCGG+TGG | - | chr5.1:54948699-54948718 | MS.gene57021:CDS | 60.0% | |
| CCACAGGTAGCAGAGAGGCA+AGG | - | chr5.1:54952193-54952212 | MS.gene57021:intron | 60.0% | |
| CCCACCGCTAACTAACAGGG+GGG | + | chr5.1:54948703-54948722 | None:intergenic | 60.0% | |
| CCCCCCTGTTAGTTAGCGGT+GGG | - | chr5.1:54948700-54948719 | MS.gene57021:CDS | 60.0% | |
| CCTTGCCTCTCTGCTACCTG+TGG | + | chr5.1:54952196-54952215 | None:intergenic | 60.0% | |
| GAATCTGCATCCGGCCCAAC+CGG | + | chr5.1:54947825-54947844 | None:intergenic | 60.0% | |
| GCTGTTTGCACGGCCTCCAT+TGG | + | chr5.1:54952257-54952276 | None:intergenic | 60.0% | |
| GTTGTCGGAGGTGGTCCTAC+GGG | - | chr5.1:54950632-54950651 | MS.gene57021:intron | 60.0% | |
| ! | TGGCTTCTCGTGTGGCTTGG+TGG | + | chr5.1:54947783-54947802 | None:intergenic | 60.0% |
| !! | GGCTTCTCGTGTGGCTTGGT+GGG | + | chr5.1:54947782-54947801 | None:intergenic | 60.0% |
| !! | GGTGGTTCTTGGCACCGGTT+GGG | - | chr5.1:54947808-54947827 | MS.gene57021:intron | 60.0% |
| !! | TGGTGGTTCTTGGCACCGGT+TGG | - | chr5.1:54947807-54947826 | MS.gene57021:intron | 60.0% |
| AACACCCGGTTCAACCGCCC+CGG | - | chr5.1:54947736-54947755 | MS.gene57021:CDS | 65.0% | |
| ACACGAGAAGCCACGCGTGG+TGG | - | chr5.1:54947790-54947809 | MS.gene57021:intron | 65.0% | |
| ACCACGCGTGGCTTCTCGTG+TGG | + | chr5.1:54947791-54947810 | None:intergenic | 65.0% | |
| CCGAGAGCCGCATAGCGAAC+CGG | + | chr5.1:54947758-54947777 | None:intergenic | 65.0% | |
| CGAGAGCCGCATAGCGAACC+GGG | + | chr5.1:54947757-54947776 | None:intergenic | 65.0% | |
| CGCGTGGTGGTTCTTGGCAC+CGG | - | chr5.1:54947803-54947822 | MS.gene57021:intron | 65.0% | |
| GAGAGCCGCATAGCGAACCG+GGG | + | chr5.1:54947756-54947775 | None:intergenic | 65.0% | |
| GCGTGGCTTCTCGTGTGGCT+TGG | + | chr5.1:54947786-54947805 | None:intergenic | 65.0% | |
| GTGCCAAGAACCACCACGCG+TGG | + | chr5.1:54947803-54947822 | None:intergenic | 65.0% | |
| ! | AACCGCCCCGGTTCGCTATG+CGG | - | chr5.1:54947748-54947767 | MS.gene57021:intron | 65.0% |
| ! | CCGGTTCGCTATGCGGCTCT+CGG | - | chr5.1:54947755-54947774 | MS.gene57021:intron | 65.0% |
| !! | GTTCTTGGCACCGGTTGGGC+CGG | - | chr5.1:54947812-54947831 | MS.gene57021:intron | 65.0% |
| AGCCGCATAGCGAACCGGGG+CGG | + | chr5.1:54947753-54947772 | None:intergenic | 70.0% | |
| CGAACCGGGGCGGTTGAACC+GGG | + | chr5.1:54947743-54947762 | None:intergenic | 70.0% | |
| GCCACACGAGAAGCCACGCG+TGG | - | chr5.1:54947787-54947806 | MS.gene57021:intron | 70.0% | |
| GCGAACCGGGGCGGTTGAAC+CGG | + | chr5.1:54947744-54947763 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 54947608 | 54952697 | 54947608 | ID=MS.gene57021 |
| chr5.1 | mRNA | 54947608 | 54952697 | 54947608 | ID=MS.gene57021.t1;Parent=MS.gene57021 |
| chr5.1 | exon | 54952245 | 54952697 | 54952245 | ID=MS.gene57021.t1.exon1;Parent=MS.gene57021.t1 |
| chr5.1 | CDS | 54952245 | 54952697 | 54952245 | ID=cds.MS.gene57021.t1;Parent=MS.gene57021.t1 |
| chr5.1 | exon | 54949795 | 54950008 | 54949795 | ID=MS.gene57021.t1.exon2;Parent=MS.gene57021.t1 |
| chr5.1 | CDS | 54949795 | 54950008 | 54949795 | ID=cds.MS.gene57021.t1;Parent=MS.gene57021.t1 |
| chr5.1 | exon | 54949554 | 54949714 | 54949554 | ID=MS.gene57021.t1.exon3;Parent=MS.gene57021.t1 |
| chr5.1 | CDS | 54949554 | 54949714 | 54949554 | ID=cds.MS.gene57021.t1;Parent=MS.gene57021.t1 |
| chr5.1 | exon | 54949256 | 54949321 | 54949256 | ID=MS.gene57021.t1.exon4;Parent=MS.gene57021.t1 |
| chr5.1 | CDS | 54949256 | 54949321 | 54949256 | ID=cds.MS.gene57021.t1;Parent=MS.gene57021.t1 |
| chr5.1 | exon | 54948961 | 54949124 | 54948961 | ID=MS.gene57021.t1.exon5;Parent=MS.gene57021.t1 |
| chr5.1 | CDS | 54948961 | 54949124 | 54948961 | ID=cds.MS.gene57021.t1;Parent=MS.gene57021.t1 |
| chr5.1 | exon | 54948620 | 54948734 | 54948620 | ID=MS.gene57021.t1.exon6;Parent=MS.gene57021.t1 |
| chr5.1 | CDS | 54948620 | 54948734 | 54948620 | ID=cds.MS.gene57021.t1;Parent=MS.gene57021.t1 |
| chr5.1 | exon | 54947927 | 54948106 | 54947927 | ID=MS.gene57021.t1.exon7;Parent=MS.gene57021.t1 |
| chr5.1 | CDS | 54947927 | 54948106 | 54947927 | ID=cds.MS.gene57021.t1;Parent=MS.gene57021.t1 |
| chr5.1 | exon | 54947608 | 54947760 | 54947608 | ID=MS.gene57021.t1.exon8;Parent=MS.gene57021.t1 |
| chr5.1 | CDS | 54947608 | 54947760 | 54947608 | ID=cds.MS.gene57021.t1;Parent=MS.gene57021.t1 |
| Gene Sequence |
| Protein sequence |