Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53986.t1 | XP_003615703.2 | 97.2 | 458 | 8 | 2 | 1 | 454 | 1 | 457 | 3.10E-256 | 894 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53986.t1 | O80874 | 72.5 | 465 | 116 | 3 | 1 | 454 | 1 | 464 | 7.7e-195 | 681.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53986.t1 | G7JZJ2 | 97.2 | 458 | 8 | 2 | 1 | 454 | 1 | 457 | 2.3e-256 | 894.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53986 | MS.gene57021 | PPI |
| MS.gene03971 | MS.gene53986 | PPI |
| MS.gene048610 | MS.gene53986 | PPI |
| MS.gene02306 | MS.gene53986 | PPI |
| MS.gene052562 | MS.gene53986 | PPI |
| MS.gene012456 | MS.gene53986 | PPI |
| MS.gene035652 | MS.gene53986 | PPI |
| MS.gene009833 | MS.gene53986 | PPI |
| MS.gene066720 | MS.gene53986 | PPI |
| MS.gene002362 | MS.gene53986 | PPI |
| MS.gene018389 | MS.gene53986 | PPI |
| MS.gene57946 | MS.gene53986 | PPI |
| MS.gene32211 | MS.gene53986 | PPI |
| MS.gene048480 | MS.gene53986 | PPI |
| MS.gene064199 | MS.gene53986 | PPI |
| MS.gene046054 | MS.gene53986 | PPI |
| MS.gene01745 | MS.gene53986 | PPI |
| MS.gene50180 | MS.gene53986 | PPI |
| MS.gene069940 | MS.gene53986 | PPI |
| MS.gene01336 | MS.gene53986 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53986.t1 | MTR_5g071250 | 98.004 | 451 | 5 | 1 | 1 | 447 | 1 | 451 | 0.0 | 910 |
| MS.gene53986.t1 | MTR_5g071250 | 97.710 | 393 | 5 | 1 | 1 | 389 | 1 | 393 | 0.0 | 791 |
| MS.gene53986.t1 | MTR_3g464380 | 78.022 | 455 | 91 | 3 | 1 | 447 | 1 | 454 | 0.0 | 706 |
| MS.gene53986.t1 | MTR_4g090580 | 75.124 | 402 | 100 | 0 | 46 | 447 | 92 | 493 | 0.0 | 653 |
| MS.gene53986.t1 | MTR_4g045997 | 40.220 | 363 | 197 | 9 | 24 | 371 | 15 | 372 | 6.85e-76 | 249 |
| MS.gene53986.t1 | MTR_4g045997 | 40.220 | 363 | 197 | 9 | 24 | 371 | 15 | 372 | 2.00e-75 | 248 |
| MS.gene53986.t1 | MTR_2g011730 | 41.796 | 323 | 175 | 7 | 59 | 371 | 51 | 370 | 6.78e-74 | 244 |
| MS.gene53986.t1 | MTR_4g091240 | 41.176 | 323 | 177 | 7 | 59 | 371 | 51 | 370 | 5.65e-73 | 242 |
| MS.gene53986.t1 | MTR_4g045993 | 40.179 | 336 | 179 | 8 | 49 | 371 | 38 | 364 | 2.20e-70 | 235 |
| MS.gene53986.t1 | MTR_4g091240 | 37.594 | 266 | 155 | 6 | 116 | 371 | 2 | 266 | 2.44e-50 | 179 |
| MS.gene53986.t1 | MTR_0931s0010 | 28.571 | 385 | 243 | 10 | 68 | 448 | 243 | 599 | 1.06e-28 | 121 |
| MS.gene53986.t1 | MTR_8g094730 | 24.939 | 413 | 256 | 13 | 58 | 441 | 83 | 470 | 1.33e-12 | 70.5 |
| MS.gene53986.t1 | MTR_8g094730 | 24.939 | 413 | 256 | 13 | 58 | 441 | 83 | 470 | 1.44e-12 | 70.5 |
| MS.gene53986.t1 | MTR_8g094730 | 25.341 | 367 | 231 | 11 | 58 | 395 | 83 | 435 | 3.06e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53986.t1 | AT2G29990 | 72.473 | 465 | 116 | 3 | 1 | 454 | 1 | 464 | 0.0 | 672 |
| MS.gene53986.t1 | AT1G07180 | 73.684 | 437 | 100 | 1 | 26 | 447 | 24 | 460 | 0.0 | 657 |
| MS.gene53986.t1 | AT4G28220 | 40.184 | 326 | 175 | 8 | 63 | 375 | 52 | 370 | 5.19e-73 | 240 |
| MS.gene53986.t1 | AT4G28220 | 40.184 | 326 | 175 | 8 | 63 | 375 | 52 | 370 | 2.09e-72 | 240 |
| MS.gene53986.t1 | AT4G21490 | 38.440 | 359 | 210 | 6 | 43 | 393 | 38 | 393 | 3.11e-67 | 227 |
| MS.gene53986.t1 | AT4G21490 | 38.440 | 359 | 209 | 6 | 43 | 393 | 38 | 392 | 5.13e-67 | 226 |
| MS.gene53986.t1 | AT4G05020 | 40.810 | 321 | 178 | 6 | 59 | 371 | 57 | 373 | 1.38e-65 | 223 |
| MS.gene53986.t1 | AT4G05020 | 40.810 | 321 | 178 | 6 | 59 | 371 | 57 | 373 | 3.03e-65 | 223 |
| MS.gene53986.t1 | AT2G20800 | 34.752 | 423 | 228 | 10 | 10 | 409 | 5 | 402 | 2.75e-61 | 211 |
Find 139 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTCCACCAGGAGATTT+AGG | 0.197104 | 5.2:+60235050 | None:intergenic |
| CTCCTTGTTGTTCAGCTAAC+TGG | 0.234341 | 5.2:+60233519 | None:intergenic |
| GCATCGCAGCTCATTATTAA+AGG | 0.239399 | 5.2:-60233557 | MS.gene53986:intron |
| GATGAAGGGTTGGTGGTGTT+GGG | 0.253970 | 5.2:+60239161 | None:intergenic |
| GGAGCACAACCCACCACTTT+TGG | 0.268489 | 5.2:-60235965 | MS.gene53986:CDS |
| TTCCATATGGGTTGTTGGTT+TGG | 0.280912 | 5.2:-60235118 | MS.gene53986:CDS |
| ATGTTCAATTTGGTAGAAAT+TGG | 0.291264 | 5.2:-60233466 | MS.gene53986:CDS |
| AGATGAAGGGTTGGTGGTGT+TGG | 0.293102 | 5.2:+60239160 | None:intergenic |
| ATGAAGGGTTGGTGGTGTTG+GGG | 0.305167 | 5.2:+60239162 | None:intergenic |
| GGGTTGTTGGTTTGGTCTAC+TGG | 0.306576 | 5.2:-60235110 | MS.gene53986:CDS |
| TGGCATCAAGATTCAACTTT+AGG | 0.314908 | 5.2:-60233387 | None:intergenic |
| TTCTTTCTTGCTAATTGTAC+TGG | 0.330871 | 5.2:-60238828 | MS.gene53986:CDS |
| ACCTTCCACCAGGAGATTTA+GGG | 0.336747 | 5.2:+60235051 | None:intergenic |
| TGTTACGTATATGTTCAATT+TGG | 0.338415 | 5.2:-60233476 | MS.gene53986:CDS |
| TGATTTGGATGCAGGGATTT+CGG | 0.349898 | 5.2:-60235772 | MS.gene53986:intron |
| TGAAGGGTTGGTGGTGTTGG+GGG | 0.359640 | 5.2:+60239163 | None:intergenic |
| AAGAGGATGGCAATAAAATA+TGG | 0.363264 | 5.2:-60233407 | MS.gene53986:CDS |
| AGATCCAGTGAGTGGATAAA+AGG | 0.364515 | 5.2:+60235074 | None:intergenic |
| GATAAGTTAGTAATTGCATT+AGG | 0.372684 | 5.2:-60235986 | MS.gene53986:CDS |
| TGAGGTTCCATATGGGTTGT+TGG | 0.390030 | 5.2:-60235123 | MS.gene53986:CDS |
| GAGAGAAGAGTGAGAGATGA+AGG | 0.394015 | 5.2:+60239146 | None:intergenic |
| GCACCGGTTGGGCCGGATGC+AGG | 0.407372 | 5.2:-60239025 | MS.gene53986:CDS |
| GTACAAGATATCTTCTCAAT+AGG | 0.408338 | 5.2:-60234728 | MS.gene53986:CDS |
| GAACCTGCATCCGGCCCAAC+CGG | 0.411504 | 5.2:+60239022 | None:intergenic |
| GCTGTCTGCACGGCCTCCAT+TGG | 0.418506 | 5.2:+60234113 | None:intergenic |
| TAAAGCTCACCTTTGTCAAC+TGG | 0.420834 | 5.2:+60235315 | None:intergenic |
| GAAGGGTTGGTGGTGTTGGG+GGG | 0.423190 | 5.2:+60239164 | None:intergenic |
| GCGAACCGGAGCGGTTGAAC+CGG | 0.430398 | 5.2:+60239103 | None:intergenic |
| GTTCTCGGCACCGGTTGGGC+CGG | 0.434816 | 5.2:-60239032 | MS.gene53986:CDS |
| CAACTGTTGCCATGCTTCCA+AGG | 0.436763 | 5.2:+60234049 | None:intergenic |
| TTGATGATGTCTGACGTTCC+AGG | 0.436902 | 5.2:-60235860 | MS.gene53986:intron |
| TCGTGGCTTCTCGTGTGGTT+TGG | 0.441320 | 5.2:+60239061 | None:intergenic |
| TGCAATTACTAACTTATCAT+AGG | 0.442331 | 5.2:+60235991 | None:intergenic |
| GGATGCAGGGATTTCGGAAG+AGG | 0.444020 | 5.2:-60235766 | MS.gene53986:intron |
| CCTACGGGAGTTGAATTTAG+TGG | 0.445405 | 5.2:-60235702 | MS.gene53986:CDS |
| CGCTTCTCCACTTCAACACC+CGG | 0.450000 | 5.2:-60239122 | MS.gene53986:CDS |
| GAACACAGACACTGGATCCT+TGG | 0.451339 | 5.2:-60236027 | MS.gene53986:CDS |
| TATCCATGTTACTTTGATTG+AGG | 0.453761 | 5.2:-60235619 | MS.gene53986:intron |
| GACCAAACCAACAACCCATA+TGG | 0.456250 | 5.2:+60235116 | None:intergenic |
| AAGAGTGAGAGATGAAGGGT+TGG | 0.459682 | 5.2:+60239151 | None:intergenic |
| CACCTTTGTCAACTGGTTGG+TGG | 0.460527 | 5.2:+60235322 | None:intergenic |
| GCAGGTTGAATCCTAGCAAC+AGG | 0.465923 | 5.2:+60238876 | None:intergenic |
| CCAGGTTCTTTGGAAATAGC+AGG | 0.466685 | 5.2:+60238858 | None:intergenic |
| TTGGTTTGGTCTACTGGTGT+TGG | 0.469540 | 5.2:-60235104 | MS.gene53986:CDS |
| TTCAATTTGGTAGAAATTGG+TGG | 0.470878 | 5.2:-60233463 | MS.gene53986:CDS |
| AAGCCACGAGTGGTGGTTCT+CGG | 0.473117 | 5.2:-60239047 | MS.gene53986:CDS |
| GATGGTACTGAGGTTCCATA+TGG | 0.473808 | 5.2:-60235131 | MS.gene53986:CDS |
| TGAGTGGCTTCGTGTTCCTT+CGG | 0.474068 | 5.2:-60234750 | MS.gene53986:CDS |
| TCCTTTCATGAACCTGCATC+CGG | 0.474458 | 5.2:+60239013 | None:intergenic |
| CCGGTTCGCTATGCGGCTCT+CGG | 0.474842 | 5.2:-60239089 | MS.gene53986:CDS |
| CCGAGAGCCGCATAGCGAAC+CGG | 0.477016 | 5.2:+60239089 | None:intergenic |
| CACTGTGTGGTTGTCGGAGG+TGG | 0.479951 | 5.2:-60235726 | MS.gene53986:CDS |
| CGAGTGGTGGTTCTCGGCAC+CGG | 0.482551 | 5.2:-60239041 | MS.gene53986:CDS |
| CTGGATCTCCCTAAATCTCC+TGG | 0.483676 | 5.2:-60235059 | MS.gene53986:CDS |
| ATGCAGGTTCATGAAAGGAT+TGG | 0.488272 | 5.2:-60239009 | MS.gene53986:CDS |
| AAAGTTACTTGGGCAAGAGC+TGG | 0.488874 | 5.2:+60234662 | None:intergenic |
| GGTGGTTCTCGGCACCGGTT+GGG | 0.489869 | 5.2:-60239036 | MS.gene53986:CDS |
| GTTGTCGGAGGTGGTCCTAC+GGG | 0.490066 | 5.2:-60235717 | MS.gene53986:CDS |
| TCGTGAAGTTTATCATGCAC+AGG | 0.493592 | 5.2:-60235909 | MS.gene53986:CDS |
| CTTCCTTTGATGACCGACTC+AGG | 0.494060 | 5.2:-60235352 | MS.gene53986:CDS |
| TGGTGGTTCTCGGCACCGGT+TGG | 0.494540 | 5.2:-60239037 | MS.gene53986:CDS |
| AAAGGAAGACAATATCTCAT+TGG | 0.494833 | 5.2:+60235367 | None:intergenic |
| AACACCCGGTTCAACCGCTC+CGG | 0.500329 | 5.2:-60239108 | MS.gene53986:CDS |
| GGCTTCTCGTGTGGTTTGGT+TGG | 0.502513 | 5.2:+60239065 | None:intergenic |
| CTGTTACACTGTGTGGTTGT+CGG | 0.506874 | 5.2:-60235732 | MS.gene53986:CDS |
| AGTGGATTTGTTGAAAGTAC+CGG | 0.512050 | 5.2:-60234698 | MS.gene53986:CDS |
| GGTTGTCGGAGGTGGTCCTA+CGG | 0.516435 | 5.2:-60235718 | MS.gene53986:CDS |
| ACCACTCGTGGCTTCTCGTG+TGG | 0.518284 | 5.2:+60239056 | None:intergenic |
| AGTGAGAGATGAAGGGTTGG+TGG | 0.519739 | 5.2:+60239154 | None:intergenic |
| GGGTTTGAGAAGTTGTTTCG+TGG | 0.521730 | 5.2:+60239184 | None:intergenic |
| TCAGGAGTGCGACTTGTTCG+TGG | 0.523879 | 5.2:-60235194 | MS.gene53986:CDS |
| CAGTTTGTTTACAAGCACCT+TGG | 0.525860 | 5.2:-60234066 | MS.gene53986:CDS |
| CCTGCTATTTCCAAAGAACC+TGG | 0.527740 | 5.2:-60238858 | MS.gene53986:CDS |
| TTTCGGAAGAGGAGAAGAAA+AGG | 0.527798 | 5.2:-60235755 | MS.gene53986:CDS |
| TGGGCAAGAGCTGGAAGTGT+TGG | 0.530653 | 5.2:+60234671 | None:intergenic |
| AGCATGAAAGATATAGACTT+GGG | 0.533211 | 5.2:-60234093 | MS.gene53986:CDS |
| GCAGCCTTGTTAAACAAAGT+AGG | 0.539948 | 5.2:-60234141 | MS.gene53986:CDS |
| CTGTTGCTGAACCTGTTGCT+AGG | 0.543077 | 5.2:-60238887 | MS.gene53986:CDS |
| TTACAAGCACCTTGGAAGCA+TGG | 0.546075 | 5.2:-60234058 | MS.gene53986:CDS |
| CGAACCGGAGCGGTTGAACC+GGG | 0.549006 | 5.2:+60239104 | None:intergenic |
| CAGCATGAAAGATATAGACT+TGG | 0.550417 | 5.2:-60234094 | MS.gene53986:CDS |
| AAAAGATAGCTTGAAGAGGA+TGG | 0.550590 | 5.2:-60233420 | MS.gene53986:CDS |
| AGAAATTGGTGGCACTTGAA+AGG | 0.553459 | 5.2:-60233452 | MS.gene53986:CDS |
| TGTATCCCCGCGTAATCACA+TGG | 0.555108 | 5.2:-60238961 | MS.gene53986:CDS |
| CTCAAGCGTTCCAACACAAG+TGG | 0.556358 | 5.2:+60238917 | None:intergenic |
| AACTCCATGAATTCCAAAAG+TGG | 0.557244 | 5.2:+60235952 | None:intergenic |
| CTTGGAAGCATGGCAACAGT+TGG | 0.557863 | 5.2:-60234048 | MS.gene53986:CDS |
| AGAGAAGAGTGAGAGATGAA+GGG | 0.558663 | 5.2:+60239147 | None:intergenic |
| GCCGGATGCAGGTTCATGAA+AGG | 0.560983 | 5.2:-60239014 | MS.gene53986:CDS |
| TCCATGAATTCCAAAAGTGG+TGG | 0.567774 | 5.2:+60235955 | None:intergenic |
| TTCACCTACTTTGTTTAACA+AGG | 0.568346 | 5.2:+60234137 | None:intergenic |
| AAATTACCTTGTTCTGTCTG+AGG | 0.572657 | 5.2:+60234004 | None:intergenic |
| AACTGAAGGAACACAGACAC+TGG | 0.572704 | 5.2:-60236035 | MS.gene53986:CDS |
| TATCTTTCATGCTGTCTGCA+CGG | 0.573160 | 5.2:+60234103 | None:intergenic |
| TCCCTAAATCTCCTGGTGGA+AGG | 0.576208 | 5.2:-60235052 | MS.gene53986:intron |
| TAGGAGATTGTAAACTTCCA+AGG | 0.576226 | 5.2:+60236010 | None:intergenic |
| GTGCCTGAGTCGGTCATCAA+AGG | 0.577551 | 5.2:+60235349 | None:intergenic |
| CGTCAGACATCATCAAATTG+AGG | 0.578854 | 5.2:+60235867 | None:intergenic |
| ACAGGATTGGTATTGATGAG+TGG | 0.585206 | 5.2:-60234766 | MS.gene53986:intron |
| GGCAACAGTTGGAAGTTACA+AGG | 0.590642 | 5.2:-60234037 | MS.gene53986:CDS |
| GGTTGAACCGGGTGTTGAAG+TGG | 0.593883 | 5.2:+60239115 | None:intergenic |
| ATTTAGGGAGATCCAGTGAG+TGG | 0.595494 | 5.2:+60235066 | None:intergenic |
| ACACAAGTGGAAGCCAAAAG+AGG | 0.598929 | 5.2:+60238930 | None:intergenic |
| AGTGAGTGGATAAAAGGTGA+TGG | 0.604545 | 5.2:+60235080 | None:intergenic |
| ACACGAGAAGCCACGAGTGG+TGG | 0.605570 | 5.2:-60239054 | MS.gene53986:CDS |
| CCATGAATTCCAAAAGTGGT+GGG | 0.610117 | 5.2:+60235956 | None:intergenic |
| AGTAGACCTCAGACAGAACA+AGG | 0.610589 | 5.2:-60234010 | MS.gene53986:intron |
| ATGGTACTGAGGTTCCATAT+GGG | 0.618943 | 5.2:-60235130 | MS.gene53986:CDS |
| GAGAAGATATCTTGTACCGA+AGG | 0.620961 | 5.2:+60234734 | None:intergenic |
| GCTCACCTTTGTCAACTGGT+TGG | 0.622023 | 5.2:+60235319 | None:intergenic |
| ACACAAAAGATAGCTTGAAG+AGG | 0.624375 | 5.2:-60233424 | MS.gene53986:CDS |
| TGAAAACCATGTGATTACGC+GGG | 0.630073 | 5.2:+60238955 | None:intergenic |
| AACAAAGTAGGTGAAGCCAA+TGG | 0.630315 | 5.2:-60234129 | MS.gene53986:CDS |
| TCAGAGATATGCTCATGTGA+AGG | 0.636417 | 5.2:-60235646 | MS.gene53986:CDS |
| AACCGCTCCGGTTCGCTATG+CGG | 0.638944 | 5.2:-60239096 | MS.gene53986:CDS |
| CCACTAAATTCAACTCCCGT+AGG | 0.642737 | 5.2:+60235702 | None:intergenic |
| TTCTCAATAGGTGACTGCAG+TGG | 0.644093 | 5.2:-60234716 | MS.gene53986:CDS |
| CAATGTGAGACTGTAACTGA+AGG | 0.645608 | 5.2:-60236049 | MS.gene53986:CDS |
| GAGGTTTCTAAACAAAGACA+TGG | 0.647360 | 5.2:+60239226 | None:intergenic |
| CCACAGGTAGCAGAGAGGCA+AGG | 0.650800 | 5.2:-60234174 | MS.gene53986:intron |
| GTGAAAACCATGTGATTACG+CGG | 0.655602 | 5.2:+60238954 | None:intergenic |
| GTGCCGAGAACCACCACTCG+TGG | 0.656504 | 5.2:+60239044 | None:intergenic |
| TATACTTAACGATGGTACTG+AGG | 0.661927 | 5.2:-60235141 | MS.gene53986:CDS |
| TGCCACCAACCAGTTGACAA+AGG | 0.666218 | 5.2:-60235324 | MS.gene53986:intron |
| TATCAATGCTGATAAACATG+AGG | 0.672808 | 5.2:-60238805 | MS.gene53986:intron |
| AAAGTAGGTGAAGCCAATGG+AGG | 0.673473 | 5.2:-60234126 | MS.gene53986:CDS |
| AGCCGCATAGCGAACCGGAG+CGG | 0.675373 | 5.2:+60239094 | None:intergenic |
| GAAAACCATGTGATTACGCG+GGG | 0.676500 | 5.2:+60238956 | None:intergenic |
| TTACACTGTGTGGTTGTCGG+AGG | 0.678237 | 5.2:-60235729 | MS.gene53986:CDS |
| GAGTAAACAAACCTTCCACC+AGG | 0.679279 | 5.2:+60235041 | None:intergenic |
| AAGAAGATTATACTTAACGA+TGG | 0.679351 | 5.2:-60235149 | MS.gene53986:CDS |
| GAAAAGGCTGTTACACTGTG+TGG | 0.679820 | 5.2:-60235739 | MS.gene53986:CDS |
| TGGTGGCATAGTGCCTGAGT+CGG | 0.683066 | 5.2:+60235339 | None:intergenic |
| ACCACACGAGAAGCCACGAG+TGG | 0.687969 | 5.2:-60239057 | MS.gene53986:CDS |
| ATACCTCAATCAAAGTAACA+TGG | 0.690821 | 5.2:+60235616 | None:intergenic |
| TTCCAGTTAGCTGAACAACA+AGG | 0.692111 | 5.2:-60233521 | MS.gene53986:CDS |
| GCATGAAAGATATAGACTTG+GGG | 0.694188 | 5.2:-60234092 | MS.gene53986:CDS |
| GATCTCCCTAAATCTCCTGG+TGG | 0.703535 | 5.2:-60235056 | MS.gene53986:CDS |
| GAACTCCACAGGTAGCAGAG+AGG | 0.756524 | 5.2:-60234179 | MS.gene53986:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCATTGTAATAATAAAA+TGG | - | chr5.2:60237098-60237117 | MS.gene53986:intron | 10.0% |
| !!! | TTTTATAATTGATATATTCA+GGG | + | chr5.2:60235285-60235304 | None:intergenic | 10.0% |
| !!! | TTTTTATAATTGATATATTC+AGG | + | chr5.2:60235286-60235305 | None:intergenic | 10.0% |
| !! | GTGTTAAAACATAATATATT+TGG | + | chr5.2:60237754-60237773 | None:intergenic | 15.0% |
| !! | TACAATTCTTATGAAAAATA+GGG | - | chr5.2:60236370-60236389 | MS.gene53986:intron | 15.0% |
| !! | TTACAATTCTTATGAAAAAT+AGG | - | chr5.2:60236369-60236388 | MS.gene53986:intron | 15.0% |
| !! | TTTCATATATAAATTGTAAC+CGG | - | chr5.2:60235204-60235223 | MS.gene53986:intron | 15.0% |
| !!! | TTGCTTTTAAAAACATAAAA+CGG | - | chr5.2:60238733-60238752 | MS.gene53986:intron | 15.0% |
| !! | AACTTAATTAAGCACTTATA+AGG | + | chr5.2:60238378-60238397 | None:intergenic | 20.0% |
| !! | AAGATAAGTTCAAATTTAGT+CGG | + | chr5.2:60238152-60238171 | None:intergenic | 20.0% |
| !! | AATTAGCAATTAACTAATCA+AGG | - | chr5.2:60234307-60234326 | MS.gene53986:intron | 20.0% |
| !! | AGAAATTTCAACATAAGAAA+AGG | + | chr5.2:60237393-60237412 | None:intergenic | 20.0% |
| !! | ATAAAATGTCACAACTAAAT+AGG | + | chr5.2:60238995-60239014 | None:intergenic | 20.0% |
| !! | ATATGAAATTGAATTTCCAT+TGG | + | chr5.2:60235192-60235211 | None:intergenic | 20.0% |
| !! | ATTAAGTTAATTATCCAAAC+AGG | - | chr5.2:60238390-60238409 | MS.gene53986:intron | 20.0% |
| !! | CATTAAAAGGTAACTTATTT+GGG | - | chr5.2:60234934-60234953 | MS.gene53986:intron | 20.0% |
| !! | TATGAAATTGAATTTCCATT+GGG | + | chr5.2:60235191-60235210 | None:intergenic | 20.0% |
| !! | TGAAAATTGAAACCATTAAA+AGG | - | chr5.2:60234921-60234940 | MS.gene53986:intron | 20.0% |
| !! | TGTTACAATGATTAATTTCA+AGG | + | chr5.2:60234132-60234151 | None:intergenic | 20.0% |
| !! | TTAAGTTAATTATCCAAACA+GGG | - | chr5.2:60238391-60238410 | MS.gene53986:intron | 20.0% |
| !! | TTTATCTCTTATGATAGAAA+TGG | - | chr5.2:60238319-60238338 | MS.gene53986:intron | 20.0% |
| !! | TTTCAATTTCATTGCTTATA+TGG | - | chr5.2:60233908-60233927 | MS.gene53986:intron | 20.0% |
| !!! | AGCAGAATATGAAAATTTTT+AGG | - | chr5.2:60238924-60238943 | MS.gene53986:CDS | 20.0% |
| !!! | TAGCATCAATTTAATTTCTA+GGG | + | chr5.2:60234081-60234100 | None:intergenic | 20.0% |
| !!! | TCTTTTTCTTTTTCTTTGTA+TGG | - | chr5.2:60233836-60233855 | MS.gene53986:intron | 20.0% |
| !!! | TTAGTTGTGACATTTTATTA+AGG | - | chr5.2:60238997-60239016 | MS.gene53986:CDS | 20.0% |
| !!! | TTTCTTTTTGCATTTTTGTA+GGG | - | chr5.2:60234984-60235003 | MS.gene53986:intron | 20.0% |
| !!! | TTTTAGATATTTCATTGACT+AGG | - | chr5.2:60233960-60233979 | MS.gene53986:intron | 20.0% |
| !!! | TTTTCTTTTTGCATTTTTGT+AGG | - | chr5.2:60234983-60235002 | MS.gene53986:intron | 20.0% |
| !!! | TTTTTAAAAGCAACAACAAA+AGG | + | chr5.2:60238726-60238745 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGTAATCCGT+GGG | + | chr5.2:60234500-60234519 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTGTAATCCG+TGG | + | chr5.2:60234501-60234520 | None:intergenic | 20.0% |
| ! | AACTAAGTGGAATTTATTTG+AGG | - | chr5.2:60234896-60234915 | MS.gene53986:intron | 25.0% |
| ! | AAGAAGATTATACTTAACGA+TGG | - | chr5.2:60237463-60237482 | MS.gene53986:intron | 25.0% |
| ! | AATAAACTGAAAACAGCTTA+TGG | + | chr5.2:60238233-60238252 | None:intergenic | 25.0% |
| ! | AATTCTGATTCTTAGATATC+AGG | + | chr5.2:60234291-60234310 | None:intergenic | 25.0% |
| ! | ACATATTGAACAAACAGTAA+AGG | + | chr5.2:60237369-60237388 | None:intergenic | 25.0% |
| ! | ATACTTGGTTATTGTTGTAT+TGG | - | chr5.2:60235049-60235068 | MS.gene53986:intron | 25.0% |
| ! | ATGAAATTGAATTTCCATTG+GGG | + | chr5.2:60235190-60235209 | None:intergenic | 25.0% |
| ! | ATGTTCAATTTGGTAGAAAT+TGG | - | chr5.2:60239146-60239165 | MS.gene53986:CDS | 25.0% |
| ! | ATTAGTTAGGGTAGAATAAA+AGG | + | chr5.2:60235026-60235045 | None:intergenic | 25.0% |
| ! | ATTCTATGTAGCTATTAACT+GGG | - | chr5.2:60238872-60238891 | MS.gene53986:CDS | 25.0% |
| ! | ATTGTAACATTGTGAATTCT+TGG | - | chr5.2:60234143-60234162 | MS.gene53986:CDS | 25.0% |
| ! | CATATTGAACAAACAGTAAA+GGG | + | chr5.2:60237368-60237387 | None:intergenic | 25.0% |
| ! | CCATTAAAAGGTAACTTATT+TGG | - | chr5.2:60234933-60234952 | MS.gene53986:intron | 25.0% |
| ! | CTAAATTTGAACTTATCTTC+CGG | - | chr5.2:60238153-60238172 | MS.gene53986:intron | 25.0% |
| ! | GATAAGTTAGTAATTGCATT+AGG | - | chr5.2:60236626-60236645 | MS.gene53986:intron | 25.0% |
| ! | TAACTGACTAAATTGTCATT+TGG | - | chr5.2:60233997-60234016 | MS.gene53986:intron | 25.0% |
| ! | TAGATATTATACACATGTTG+TGG | - | chr5.2:60237031-60237050 | MS.gene53986:intron | 25.0% |
| ! | TAGGTAAAATACTTTCAGAA+TGG | - | chr5.2:60238943-60238962 | MS.gene53986:CDS | 25.0% |
| ! | TCAAGAAATGAAAGTTACTT+GGG | + | chr5.2:60237963-60237982 | None:intergenic | 25.0% |
| ! | TGCAATTACTAACTTATCAT+AGG | + | chr5.2:60236624-60236643 | None:intergenic | 25.0% |
| ! | TGTTACGTATATGTTCAATT+TGG | - | chr5.2:60239136-60239155 | MS.gene53986:CDS | 25.0% |
| ! | TTACAAGTTTACCACAAAAT+TGG | + | chr5.2:60237151-60237170 | None:intergenic | 25.0% |
| ! | TTATATGGTTTAGTTATGGT+TGG | - | chr5.2:60233923-60233942 | MS.gene53986:intron | 25.0% |
| ! | TTCAAGAAATGAAAGTTACT+TGG | + | chr5.2:60237964-60237983 | None:intergenic | 25.0% |
| ! | TTCATATTCTGCTTATATCA+CGG | + | chr5.2:60238917-60238936 | None:intergenic | 25.0% |
| ! | TTCTTAATAAGAATGATGAG+TGG | - | chr5.2:60234612-60234631 | MS.gene53986:intron | 25.0% |
| ! | TTGCTTATATGGTTTAGTTA+TGG | - | chr5.2:60233919-60233938 | MS.gene53986:intron | 25.0% |
| ! | TTTGTAATCTGTAACTGATT+TGG | - | chr5.2:60236825-60236844 | MS.gene53986:intron | 25.0% |
| !! | AACTGACTAAATTGTCATTT+GGG | - | chr5.2:60233998-60234017 | MS.gene53986:intron | 25.0% |
| !! | CCAAATAAGTTACCTTTTAA+TGG | + | chr5.2:60234936-60234955 | None:intergenic | 25.0% |
| !! | CTAGCATCAATTTAATTTCT+AGG | + | chr5.2:60234082-60234101 | None:intergenic | 25.0% |
| !! | TGATTTTTGTCTCAAACTTT+AGG | - | chr5.2:60234549-60234568 | MS.gene53986:intron | 25.0% |
| !! | TGTTACAATTTTGTTAGTCA+CGG | + | chr5.2:60236082-60236101 | None:intergenic | 25.0% |
| !!! | AAGCATTATTTTTCAAACAC+AGG | + | chr5.2:60236792-60236811 | None:intergenic | 25.0% |
| !!! | AATGTGTTACTTTCTTTACT+TGG | - | chr5.2:60238058-60238077 | MS.gene53986:intron | 25.0% |
| !!! | TTCTAGTCGATTTGTTAAAT+TGG | - | chr5.2:60235325-60235344 | MS.gene53986:CDS | 25.0% |
| !!! | TTGCATTTATTTTCTTTCCA+TGG | - | chr5.2:60237604-60237623 | MS.gene53986:intron | 25.0% |
| !!! | TTGGTTTTAGTTTAACACTA+GGG | - | chr5.2:60238003-60238022 | MS.gene53986:intron | 25.0% |
| !!! | TTTGGTTTTAGTTTAACACT+AGG | - | chr5.2:60238002-60238021 | MS.gene53986:intron | 25.0% |
| AAAATACTTTCAGAATGGCT+AGG | - | chr5.2:60238948-60238967 | MS.gene53986:CDS | 30.0% | |
| AAAGGAAGACAATATCTCAT+TGG | + | chr5.2:60237248-60237267 | None:intergenic | 30.0% | |
| AACCAAGTATCTCATTAGTT+AGG | + | chr5.2:60235039-60235058 | None:intergenic | 30.0% | |
| AACCCAAATGACTATTTACT+CGG | + | chr5.2:60235231-60235250 | None:intergenic | 30.0% | |
| AACCCAAATGACTATTTACT+TGG | + | chr5.2:60235231-60235250 | None:intergenic | 30.0% | |
| AAGAGGATGGCAATAAAATA+TGG | - | chr5.2:60239205-60239224 | MS.gene53986:CDS | 30.0% | |
| ACACAAGAATTGTTAGCAAT+TGG | + | chr5.2:60234408-60234427 | None:intergenic | 30.0% | |
| ACCAAATAAGCCTCAATAAA+AGG | + | chr5.2:60238648-60238667 | None:intergenic | 30.0% | |
| ACCAAGTATCTCATTAGTTA+GGG | + | chr5.2:60235038-60235057 | None:intergenic | 30.0% | |
| ACCCAAATGACTATTTACTT+GGG | + | chr5.2:60235230-60235249 | None:intergenic | 30.0% | |
| ACCGTTGCAAAATTTACAAT+TGG | - | chr5.2:60237630-60237649 | MS.gene53986:intron | 30.0% | |
| ACTAGAAAAAGACACATTTG+AGG | + | chr5.2:60235312-60235331 | None:intergenic | 30.0% | |
| ACTCTTATTAGTCACTCAAT+GGG | - | chr5.2:60235503-60235522 | MS.gene53986:intron | 30.0% | |
| AGAAAGTAACACATTCAGAA+TGG | + | chr5.2:60238053-60238072 | None:intergenic | 30.0% | |
| AGAACAGTGTTATAAAAACC+AGG | + | chr5.2:60236413-60236432 | None:intergenic | 30.0% | |
| AGCATGAAAGATATAGACTT+GGG | - | chr5.2:60238519-60238538 | MS.gene53986:intron | 30.0% | |
| AGTTATGGTTGGAGAAAAAA+AGG | - | chr5.2:60233934-60233953 | MS.gene53986:intron | 30.0% | |
| ATACCTCAATCAAAGTAACA+TGG | + | chr5.2:60236999-60237018 | None:intergenic | 30.0% | |
| ATATCAACTTAGCGTCTATT+TGG | - | chr5.2:60238125-60238144 | MS.gene53986:intron | 30.0% | |
| ATCTGTATTATCATGAAAGC+AGG | - | chr5.2:60237688-60237707 | MS.gene53986:intron | 30.0% | |
| ATTCAGAATGGAATGTGTTT+AGG | + | chr5.2:60238041-60238060 | None:intergenic | 30.0% | |
| ATTGCTAACAATTCTTGTGT+TGG | - | chr5.2:60234408-60234427 | MS.gene53986:intron | 30.0% | |
| CAATTTATTCATGTCTCTTC+AGG | - | chr5.2:60237222-60237241 | MS.gene53986:intron | 30.0% | |
| CTAAATAGGTTTAAGCTCTT+TGG | + | chr5.2:60238981-60239000 | None:intergenic | 30.0% | |
| CTAGAAAAAGACACATTTGA+GGG | + | chr5.2:60235311-60235330 | None:intergenic | 30.0% | |
| CTTCGTTTAGTGTTCATTAT+TGG | - | chr5.2:60235820-60235839 | MS.gene53986:intron | 30.0% | |
| GATTCTATGTAGCTATTAAC+TGG | - | chr5.2:60238871-60238890 | MS.gene53986:CDS | 30.0% | |
| GGTTTGATTAATATGACTGA+TGG | - | chr5.2:60235247-60235266 | MS.gene53986:intron | 30.0% | |
| GTACAAGATATCTTCTCAAT+AGG | - | chr5.2:60237884-60237903 | MS.gene53986:intron | 30.0% | |
| GTAGAAAAGAAAGAGAATTC+TGG | - | chr5.2:60235949-60235968 | MS.gene53986:CDS | 30.0% | |
| GTATGGTATCTAAGCTTATT+TGG | - | chr5.2:60233853-60233872 | MS.gene53986:intron | 30.0% | |
| GTGATTCTTACTTTACAAGT+TGG | - | chr5.2:60234245-60234264 | MS.gene53986:intron | 30.0% | |
| GTGTTAAAGTGACTATGATA+TGG | - | chr5.2:60234659-60234678 | MS.gene53986:intron | 30.0% | |
| GTTATGGTTGGAGAAAAAAA+GGG | - | chr5.2:60233935-60233954 | MS.gene53986:intron | 30.0% | |
| GTTGATATGAATAAGCTTTC+AGG | + | chr5.2:60238113-60238132 | None:intergenic | 30.0% | |
| TAACATTGTGAATTCTTGGT+TGG | - | chr5.2:60234147-60234166 | MS.gene53986:CDS | 30.0% | |
| TAAGCCTCAATAAAAGGTTA+AGG | + | chr5.2:60238642-60238661 | None:intergenic | 30.0% | |
| TAATAAGAATGATGAGTGGT+TGG | - | chr5.2:60234616-60234635 | MS.gene53986:intron | 30.0% | |
| TATCAATGCTGATAAACATG+AGG | - | chr5.2:60233807-60233826 | MS.gene53986:intron | 30.0% | |
| TGTAACAGAATTCTGACTTT+GGG | - | chr5.2:60236095-60236114 | MS.gene53986:intron | 30.0% | |
| TGTTGAAATTTCTATCAGTC+AGG | - | chr5.2:60237400-60237419 | MS.gene53986:intron | 30.0% | |
| TTCAATTTGGTAGAAATTGG+TGG | - | chr5.2:60239149-60239168 | MS.gene53986:CDS | 30.0% | |
| TTCAGAATGGAATGTGTTTA+GGG | + | chr5.2:60238040-60238059 | None:intergenic | 30.0% | |
| TTCTTTCTTGCTAATTGTAC+TGG | - | chr5.2:60233784-60233803 | MS.gene53986:intron | 30.0% | |
| TTGCTAACAATTCTTGTGTT+GGG | - | chr5.2:60234409-60234428 | MS.gene53986:intron | 30.0% | |
| TTGTAACAGAATTCTGACTT+TGG | - | chr5.2:60236094-60236113 | MS.gene53986:intron | 30.0% | |
| TTTCTGCTAAGAAAGAAGAT+GGG | - | chr5.2:60236169-60236188 | MS.gene53986:intron | 30.0% | |
| ! | AAGGTAACTTATTTGGGATT+TGG | - | chr5.2:60234940-60234959 | MS.gene53986:intron | 30.0% |
| ! | ACCTTTTATTGAGGCTTATT+TGG | - | chr5.2:60238644-60238663 | MS.gene53986:intron | 30.0% |
| ! | CATTCCTTAACCTTTTATTG+AGG | - | chr5.2:60238635-60238654 | MS.gene53986:intron | 30.0% |
| ! | GCCAATTGTAAATTTTGCAA+CGG | + | chr5.2:60237634-60237653 | None:intergenic | 30.0% |
| ! | TTCACCTACTTTGTTTAACA+AGG | + | chr5.2:60238478-60238497 | None:intergenic | 30.0% |
| ! | TTTACTAACTTTTCTCCTAC+AGG | - | chr5.2:60238761-60238780 | MS.gene53986:intron | 30.0% |
| ! | TTTTCTGCTAAGAAAGAAGA+TGG | - | chr5.2:60236168-60236187 | MS.gene53986:intron | 30.0% |
| !! | AAAGGGTGTTATACTAGTAT+TGG | - | chr5.2:60236476-60236495 | MS.gene53986:intron | 30.0% |
| !! | CAAATGTGTCTTTTTCTAGT+CGG | - | chr5.2:60235312-60235331 | MS.gene53986:intron | 30.0% |
| !! | TAGAATGTTCTGAAACTAAG+TGG | - | chr5.2:60234883-60234902 | MS.gene53986:intron | 30.0% |
| !! | TATCCATGTTACTTTGATTG+AGG | - | chr5.2:60236993-60237012 | MS.gene53986:intron | 30.0% |
| !! | TGAAGAAGTAACTTTTTGAG+AGG | + | chr5.2:60233408-60233427 | None:intergenic | 30.0% |
| !!! | TACTTTACAAGTTGGTTTTG+AGG | - | chr5.2:60234253-60234272 | MS.gene53986:intron | 30.0% |
| !!! | TTACTGTGACAGACATTTTT+TGG | + | chr5.2:60237191-60237210 | None:intergenic | 30.0% |
| AAAAGATAGCTTGAAGAGGA+TGG | - | chr5.2:60239192-60239211 | MS.gene53986:CDS | 35.0% | |
| AAATGACTATTTACTTGGGC+CGG | + | chr5.2:60235226-60235245 | None:intergenic | 35.0% | |
| AAATTACCTTGTTCTGTCTG+AGG | + | chr5.2:60238611-60238630 | None:intergenic | 35.0% | |
| AACATTGTGACTTCTTCGTT+GGG | - | chr5.2:60235403-60235422 | MS.gene53986:intron | 35.0% | |
| AACGAAGAAGTCACAATGTT+AGG | + | chr5.2:60235403-60235422 | None:intergenic | 35.0% | |
| AACTCCATGAATTCCAAAAG+TGG | + | chr5.2:60236663-60236682 | None:intergenic | 35.0% | |
| AATATCCTAACTAAACTGCC+AGG | + | chr5.2:60236251-60236270 | None:intergenic | 35.0% | |
| AATCAGATTTGAGAGAGTCT+TGG | - | chr5.2:60235973-60235992 | MS.gene53986:CDS | 35.0% | |
| ACACAAAAGATAGCTTGAAG+AGG | - | chr5.2:60239188-60239207 | MS.gene53986:CDS | 35.0% | |
| ACCCAAATGACTATTTACTC+GGG | + | chr5.2:60235634-60235653 | None:intergenic | 35.0% | |
| ACCCTAACTAATGAGATACT+TGG | - | chr5.2:60235034-60235053 | MS.gene53986:intron | 35.0% | |
| AGACTGTTTAGAAGAGCTTA+TGG | - | chr5.2:60238190-60238209 | MS.gene53986:intron | 35.0% | |
| AGAGCACAGTGGTATATTTA+TGG | - | chr5.2:60236018-60236037 | MS.gene53986:CDS | 35.0% | |
| AGTATGTGTCTTTCGTTTGT+CGG | - | chr5.2:60234100-60234119 | MS.gene53986:CDS | 35.0% | |
| AGTCTCACAAGTGTTTATAC+CGG | + | chr5.2:60238175-60238194 | None:intergenic | 35.0% | |
| ATGAATAAGCTTTCAGGCAA+AGG | + | chr5.2:60238107-60238126 | None:intergenic | 35.0% | |
| ATTGAACCTAAGACTTTGAG+AGG | + | chr5.2:60234381-60234400 | None:intergenic | 35.0% | |
| ATTGTGAATTCTTGGTTGGA+GGG | - | chr5.2:60234151-60234170 | MS.gene53986:CDS | 35.0% | |
| CAAGAATTGTTAGCAATTGG+AGG | + | chr5.2:60234405-60234424 | None:intergenic | 35.0% | |
| CAGCATGAAAGATATAGACT+TGG | - | chr5.2:60238518-60238537 | MS.gene53986:intron | 35.0% | |
| CTGAGATGCATAGAAAGTAA+AGG | - | chr5.2:60235921-60235940 | MS.gene53986:CDS | 35.0% | |
| CTTATTTGGACATGTCTATC+AGG | - | chr5.2:60233867-60233886 | MS.gene53986:intron | 35.0% | |
| GAAAAAAGAACCAGGTTCTT+TGG | + | chr5.2:60233767-60233786 | None:intergenic | 35.0% | |
| GAAACATATGCCAAAGTCAA+AGG | + | chr5.2:60234711-60234730 | None:intergenic | 35.0% | |
| GACTCTTATTAGTCACTCAA+TGG | - | chr5.2:60235502-60235521 | MS.gene53986:intron | 35.0% | |
| GATATATTCAGGGACTATAG+TGG | + | chr5.2:60235275-60235294 | None:intergenic | 35.0% | |
| GCAAGAAAGAAAAAAGAACC+AGG | + | chr5.2:60233775-60233794 | None:intergenic | 35.0% | |
| GCATGAAAGATATAGACTTG+GGG | - | chr5.2:60238520-60238539 | MS.gene53986:intron | 35.0% | |
| GCCCAAGTAAATAGTCATTT+GGG | - | chr5.2:60235226-60235245 | MS.gene53986:intron | 35.0% | |
| GTTCAAGTGGCAATACATTA+AGG | + | chr5.2:60238417-60238436 | None:intergenic | 35.0% | |
| GTTTATTTCCATAATCCTCC+AGG | - | chr5.2:60238246-60238265 | MS.gene53986:intron | 35.0% | |
| TAACATTGTGACTTCTTCGT+TGG | - | chr5.2:60235402-60235421 | MS.gene53986:intron | 35.0% | |
| TAGGAGATTGTAAACTTCCA+AGG | + | chr5.2:60236605-60236624 | None:intergenic | 35.0% | |
| TATACTTAACGATGGTACTG+AGG | - | chr5.2:60237471-60237490 | MS.gene53986:intron | 35.0% | |
| TGAATTGCTGACAATGACAA+CGG | + | chr5.2:60237084-60237103 | None:intergenic | 35.0% | |
| TGAGTGACTATTGTTCCAAA+AGG | + | chr5.2:60235097-60235116 | None:intergenic | 35.0% | |
| TGGAACAATAGTCACTCAAT+GGG | - | chr5.2:60235099-60235118 | MS.gene53986:CDS | 35.0% | |
| TGTCAAAACTCTAAGCAACA+TGG | + | chr5.2:60235457-60235476 | None:intergenic | 35.0% | |
| TTAGACAGCAACGAACAAAA+GGG | - | chr5.2:60236459-60236478 | MS.gene53986:intron | 35.0% | |
| TTCTGCTAAGAAAGAAGATG+GGG | - | chr5.2:60236170-60236189 | MS.gene53986:intron | 35.0% | |
| TTGAATTCCTGACAATGTGT+AGG | - | chr5.2:60237979-60237998 | MS.gene53986:intron | 35.0% | |
| TTGGAACAATAGTCACTCAA+TGG | - | chr5.2:60235098-60235117 | MS.gene53986:CDS | 35.0% | |
| TTTAGACAGCAACGAACAAA+AGG | - | chr5.2:60236458-60236477 | MS.gene53986:intron | 35.0% | |
| ! | AACCAGAACAAAGCTTTGTA+TGG | + | chr5.2:60234440-60234459 | None:intergenic | 35.0% |
| ! | ACTTTCAAAGCAGTTCCTTT+TGG | - | chr5.2:60235079-60235098 | MS.gene53986:CDS | 35.0% |
| ! | AGAATTCTGACTTTGGGAAA+AGG | - | chr5.2:60236101-60236120 | MS.gene53986:intron | 35.0% |
| ! | AGTGTTTTCGTTTGTCAGTT+TGG | - | chr5.2:60235360-60235379 | MS.gene53986:CDS | 35.0% |
| ! | ATTGGCAGCTGATTTCTATA+TGG | - | chr5.2:60237648-60237667 | MS.gene53986:intron | 35.0% |
| ! | ATTGGCTTCTATGAACTCTA+AGG | + | chr5.2:60237133-60237152 | None:intergenic | 35.0% |
| ! | CAATTTTGTTAGTCACGGTT+AGG | + | chr5.2:60236077-60236096 | None:intergenic | 35.0% |
| ! | GAATTCTGACTTTGGGAAAA+GGG | - | chr5.2:60236102-60236121 | MS.gene53986:intron | 35.0% |
| ! | GTTCATAGAAGCCAATTTTG+TGG | - | chr5.2:60237137-60237156 | MS.gene53986:intron | 35.0% |
| ! | TTTGTCTCAAACTTTAGGAG+TGG | - | chr5.2:60234554-60234573 | MS.gene53986:intron | 35.0% |
| ! | TTTTGTTCGTTGCTGTCTAA+AGG | + | chr5.2:60236459-60236478 | None:intergenic | 35.0% |
| !! | AGTGGATTTGTTGAAAGTAC+CGG | - | chr5.2:60237914-60237933 | MS.gene53986:intron | 35.0% |
| !! | TCGATTTTCCTTACTTTTCC+TGG | - | chr5.2:60236230-60236249 | MS.gene53986:intron | 35.0% |
| !!! | AGTCTGACACATTGTTTTGA+AGG | - | chr5.2:60236538-60236557 | MS.gene53986:intron | 35.0% |
| !!! | GTTTTCTCAGTTGGTTTGTT+TGG | - | chr5.2:60238808-60238827 | MS.gene53986:CDS | 35.0% |
| !!! | TGGGCTACAACTTTTGTTTT+TGG | - | chr5.2:60238891-60238910 | MS.gene53986:CDS | 35.0% |
| AAACCAAGTCGTAGGCTATT+AGG | + | chr5.2:60236149-60236168 | None:intergenic | 40.0% | |
| AAATGACTATTTACTCGGGC+CGG | + | chr5.2:60235630-60235649 | None:intergenic | 40.0% | |
| AACAAAGTAGGTGAAGCCAA+TGG | - | chr5.2:60238483-60238502 | MS.gene53986:intron | 40.0% | |
| AACCAAACCTACACATTGTC+AGG | + | chr5.2:60237989-60238008 | None:intergenic | 40.0% | |
| AAGTTCTCTCTTCACAGGAT+TGG | - | chr5.2:60237833-60237852 | MS.gene53986:intron | 40.0% | |
| AATCCCACCGTTAACTAACA+GGG | + | chr5.2:60234474-60234493 | None:intergenic | 40.0% | |
| ACTCAATGGGATAGTTGACA+TGG | - | chr5.2:60235112-60235131 | MS.gene53986:CDS | 40.0% | |
| ACTCACAGTGCAGCTTAATT+TGG | - | chr5.2:60236512-60236531 | MS.gene53986:intron | 40.0% | |
| AGAGAAGAGTGAGAGATGAA+GGG | + | chr5.2:60233468-60233487 | None:intergenic | 40.0% | |
| AGATCCAGTGAGTGGATAAA+AGG | + | chr5.2:60237541-60237560 | None:intergenic | 40.0% | |
| AGCAGAAAAAACCAAGTCGT+AGG | + | chr5.2:60236157-60236176 | None:intergenic | 40.0% | |
| AGTGAGTGGATAAAAGGTGA+TGG | + | chr5.2:60237535-60237554 | None:intergenic | 40.0% | |
| ATATGTAAACCCCCAAGCAT+TGG | - | chr5.2:60234335-60234354 | MS.gene53986:intron | 40.0% | |
| ATGCAGGTTCATGAAAGGAT+TGG | - | chr5.2:60233603-60233622 | MS.gene53986:intron | 40.0% | |
| ATTCCTAATAGCCTACGACT+TGG | - | chr5.2:60236143-60236162 | MS.gene53986:intron | 40.0% | |
| CAATACATTAAGGCCCTGTT+TGG | + | chr5.2:60238407-60238426 | None:intergenic | 40.0% | |
| CAATGTGAGACTGTAACTGA+AGG | - | chr5.2:60236563-60236582 | MS.gene53986:intron | 40.0% | |
| CAGGAAAATTATCGCAAACC+TGG | + | chr5.2:60236773-60236792 | None:intergenic | 40.0% | |
| CATTGTGAATTCTTGGTTGG+AGG | - | chr5.2:60234150-60234169 | MS.gene53986:CDS | 40.0% | |
| CCATGAATTCCAAAAGTGGT+GGG | + | chr5.2:60236659-60236678 | None:intergenic | 40.0% | |
| CCTCTGCAAACTATGTATTG+AGG | - | chr5.2:60234755-60234774 | MS.gene53986:CDS | 40.0% | |
| CGTCAGACATCATCAAATTG+AGG | + | chr5.2:60236748-60236767 | None:intergenic | 40.0% | |
| CTAAACTGCCAGGAAAAGTA+AGG | + | chr5.2:60236241-60236260 | None:intergenic | 40.0% | |
| CTCAATGGGATAGTTGACAT+GGG | - | chr5.2:60235113-60235132 | MS.gene53986:CDS | 40.0% | |
| CTCACAGTGCAGCTTAATTT+GGG | - | chr5.2:60236513-60236532 | MS.gene53986:intron | 40.0% | |
| CTTCGTTGGGTGTTCATTAT+TGG | - | chr5.2:60235416-60235435 | MS.gene53986:intron | 40.0% | |
| GAGAAGATATCTTGTACCGA+AGG | + | chr5.2:60237881-60237900 | None:intergenic | 40.0% | |
| GCATCGCAGCTCATTATTAA+AGG | - | chr5.2:60239055-60239074 | MS.gene53986:CDS | 40.0% | |
| GCCCGAGTAAATAGTCATTT+GGG | - | chr5.2:60235630-60235649 | MS.gene53986:CDS | 40.0% | |
| GGCCCAAGTAAATAGTCATT+TGG | - | chr5.2:60235225-60235244 | MS.gene53986:intron | 40.0% | |
| GTACAAAGTTCTCTCTTCAC+AGG | - | chr5.2:60237828-60237847 | MS.gene53986:intron | 40.0% | |
| GTGAAAACCATGTGATTACG+CGG | + | chr5.2:60233661-60233680 | None:intergenic | 40.0% | |
| TAAAGCTCACCTTTGTCAAC+TGG | + | chr5.2:60237300-60237319 | None:intergenic | 40.0% | |
| TAAGCTATCCTGGAGGATTA+TGG | + | chr5.2:60238257-60238276 | None:intergenic | 40.0% | |
| TAATCCCACCGTTAACTAAC+AGG | + | chr5.2:60234475-60234494 | None:intergenic | 40.0% | |
| TATCTTTCATGCTGTCTGCA+CGG | + | chr5.2:60238512-60238531 | None:intergenic | 40.0% | |
| TCAGAGATATGCTCATGTGA+AGG | - | chr5.2:60236966-60236985 | MS.gene53986:intron | 40.0% | |
| TCATGAAAGCAGGATCACAT+TGG | - | chr5.2:60237698-60237717 | MS.gene53986:intron | 40.0% | |
| TCCATGAATTCCAAAAGTGG+TGG | + | chr5.2:60236660-60236679 | None:intergenic | 40.0% | |
| TCGTGAAGTTTATCATGCAC+AGG | - | chr5.2:60236703-60236722 | MS.gene53986:intron | 40.0% | |
| TCTGCTTTCATAAGCTATCC+TGG | + | chr5.2:60238267-60238286 | None:intergenic | 40.0% | |
| TGAAAACCATGTGATTACGC+GGG | + | chr5.2:60233660-60233679 | None:intergenic | 40.0% | |
| TGCTCTTATGCAACTCAGAA+TGG | + | chr5.2:60236004-60236023 | None:intergenic | 40.0% | |
| TGGAGAAAAGCTTAAACTGC+AGG | - | chr5.2:60234181-60234200 | MS.gene53986:intron | 40.0% | |
| TTCCAGTTAGCTGAACAACA+AGG | - | chr5.2:60239091-60239110 | MS.gene53986:CDS | 40.0% | |
| TTCCTGACAATGTGTAGGTT+TGG | - | chr5.2:60237984-60238003 | MS.gene53986:intron | 40.0% | |
| TTTCGGAAGAGGAGAAGAAA+AGG | - | chr5.2:60236857-60236876 | MS.gene53986:intron | 40.0% | |
| TTTCTCCTACAGGATGCAAA+AGG | - | chr5.2:60238771-60238790 | MS.gene53986:intron | 40.0% | |
| ! | AATTTTGCAACGGTTGTCCA+TGG | + | chr5.2:60237624-60237643 | None:intergenic | 40.0% |
| ! | ACAATCCTTTTGCATCCTGT+AGG | + | chr5.2:60238779-60238798 | None:intergenic | 40.0% |
| ! | AGAAATTGGTGGCACTTGAA+AGG | - | chr5.2:60239160-60239179 | MS.gene53986:CDS | 40.0% |
| ! | ATCACCTTTTATCCACTCAC+TGG | - | chr5.2:60237534-60237553 | MS.gene53986:intron | 40.0% |
| ! | ATGGTACTGAGGTTCCATAT+GGG | - | chr5.2:60237482-60237501 | MS.gene53986:intron | 40.0% |
| ! | CAGTTTGTTTACAAGCACCT+TGG | - | chr5.2:60238546-60238565 | MS.gene53986:intron | 40.0% |
| ! | CATGGTTTTCACACCTCTTT+TGG | - | chr5.2:60233669-60233688 | MS.gene53986:intron | 40.0% |
| ! | CCTCAATACATAGTTTGCAG+AGG | + | chr5.2:60234758-60234777 | None:intergenic | 40.0% |
| ! | CTTTTCCTGGCAGTTTAGTT+AGG | - | chr5.2:60236243-60236262 | MS.gene53986:intron | 40.0% |
| ! | TGAGTTACGACCTTTGACTT+TGG | - | chr5.2:60234698-60234717 | MS.gene53986:CDS | 40.0% |
| ! | TGATTTGGATGCAGGGATTT+CGG | - | chr5.2:60236840-60236859 | MS.gene53986:intron | 40.0% |
| ! | TGTGCTGCAAAATGCGTTTT+TGG | - | chr5.2:60234821-60234840 | MS.gene53986:intron | 40.0% |
| ! | TTCCATATGGGTTGTTGGTT+TGG | - | chr5.2:60237494-60237513 | MS.gene53986:intron | 40.0% |
| !! | ACAGGATTGGTATTGATGAG+TGG | - | chr5.2:60237846-60237865 | MS.gene53986:intron | 40.0% |
| !! | CTGTAACTGATTTGGATGCA+GGG | - | chr5.2:60236833-60236852 | MS.gene53986:intron | 40.0% |
| !! | GACCATACAAAGCTTTGTTC+TGG | - | chr5.2:60234435-60234454 | MS.gene53986:intron | 40.0% |
| !! | GCAGCCTTGTTAAACAAAGT+AGG | - | chr5.2:60238471-60238490 | MS.gene53986:intron | 40.0% |
| !! | TCTGTAACTGATTTGGATGC+AGG | - | chr5.2:60236832-60236851 | MS.gene53986:intron | 40.0% |
| AAAGTAGGTGAAGCCAATGG+AGG | - | chr5.2:60238486-60238505 | MS.gene53986:intron | 45.0% | |
| AAAGTTACTTGGGCAAGAGC+TGG | + | chr5.2:60237953-60237972 | None:intergenic | 45.0% | |
| AACCTTCCACCAGGAGATTT+AGG | + | chr5.2:60237565-60237584 | None:intergenic | 45.0% | |
| AACTGAAGGAACACAGACAC+TGG | - | chr5.2:60236577-60236596 | MS.gene53986:intron | 45.0% | |
| AAGAGTGAGAGATGAAGGGT+TGG | + | chr5.2:60233464-60233483 | None:intergenic | 45.0% | |
| ACACAAGTGGAAGCCAAAAG+AGG | + | chr5.2:60233685-60233704 | None:intergenic | 45.0% | |
| ACATCACCAGACCAATGCTT+GGG | + | chr5.2:60234349-60234368 | None:intergenic | 45.0% | |
| ACCTTCCACCAGGAGATTTA+GGG | + | chr5.2:60237564-60237583 | None:intergenic | 45.0% | |
| AGTAGACCTCAGACAGAACA+AGG | - | chr5.2:60238602-60238621 | MS.gene53986:intron | 45.0% | |
| ATCCCACCGTTAACTAACAG+GGG | + | chr5.2:60234473-60234492 | None:intergenic | 45.0% | |
| ATCGCTCCTCTCAAAGTCTT+AGG | - | chr5.2:60234372-60234391 | MS.gene53986:intron | 45.0% | |
| ATTTAGGGAGATCCAGTGAG+TGG | + | chr5.2:60237549-60237568 | None:intergenic | 45.0% | |
| CATTGTATCCCAGGAGAAAG+GGG | - | chr5.2:60238675-60238694 | MS.gene53986:intron | 45.0% | |
| CCACTAAATTCAACTCCCGT+AGG | + | chr5.2:60236913-60236932 | None:intergenic | 45.0% | |
| CCTACGGGAGTTGAATTTAG+TGG | - | chr5.2:60236910-60236929 | MS.gene53986:intron | 45.0% | |
| CTGTTACACTGTGTGGTTGT+CGG | - | chr5.2:60236880-60236899 | MS.gene53986:intron | 45.0% | |
| GAAAACCATGTGATTACGCG+GGG | + | chr5.2:60233659-60233678 | None:intergenic | 45.0% | |
| GAAAAGGCTGTTACACTGTG+TGG | - | chr5.2:60236873-60236892 | MS.gene53986:intron | 45.0% | |
| GACCAAACCAACAACCCATA+TGG | + | chr5.2:60237499-60237518 | None:intergenic | 45.0% | |
| GAGAGAAGAGTGAGAGATGA+AGG | + | chr5.2:60233469-60233488 | None:intergenic | 45.0% | |
| GAGTAAACAAACCTTCCACC+AGG | + | chr5.2:60237574-60237593 | None:intergenic | 45.0% | |
| GCAAAAGGATTGTCTCTAGC+AGG | - | chr5.2:60238786-60238805 | MS.gene53986:intron | 45.0% | |
| GCAACAACAAAAGGACCTCT+AGG | + | chr5.2:60238717-60238736 | None:intergenic | 45.0% | |
| GCACAACAGTACTACAGCTA+TGG | + | chr5.2:60236310-60236329 | None:intergenic | 45.0% | |
| GCATTGTATCCCAGGAGAAA+GGG | - | chr5.2:60238674-60238693 | MS.gene53986:intron | 45.0% | |
| GCTTTCATAAGCTATCCTGG+AGG | + | chr5.2:60238264-60238283 | None:intergenic | 45.0% | |
| GGCAACAGTTGGAAGTTACA+AGG | - | chr5.2:60238575-60238594 | MS.gene53986:intron | 45.0% | |
| GGCCCGAGTAAATAGTCATT+TGG | - | chr5.2:60235629-60235648 | MS.gene53986:CDS | 45.0% | |
| GTGAAACATCGTAACTCTCC+TGG | - | chr5.2:60236392-60236411 | MS.gene53986:intron | 45.0% | |
| GTTATGCAACAAGCCAAACC+AGG | - | chr5.2:60236192-60236211 | MS.gene53986:intron | 45.0% | |
| TACATCACCAGACCAATGCT+TGG | + | chr5.2:60234350-60234369 | None:intergenic | 45.0% | |
| TCCTTTCATGAACCTGCATC+CGG | + | chr5.2:60233602-60233621 | None:intergenic | 45.0% | |
| TGTTCCTCCAGCTAATGACA+CGG | + | chr5.2:60238851-60238870 | None:intergenic | 45.0% | |
| TTACAAGCACCTTGGAAGCA+TGG | - | chr5.2:60238554-60238573 | MS.gene53986:intron | 45.0% | |
| TTCTCAATAGGTGACTGCAG+TGG | - | chr5.2:60237896-60237915 | MS.gene53986:intron | 45.0% | |
| TTGACCCCCCTGTTAGTTAA+CGG | - | chr5.2:60234464-60234483 | MS.gene53986:intron | 45.0% | |
| ! | ATCTAACCCGTGTCATTAGC+TGG | - | chr5.2:60238841-60238860 | MS.gene53986:CDS | 45.0% |
| ! | CCAGGTTCTTTGGAAATAGC+AGG | + | chr5.2:60233757-60233776 | None:intergenic | 45.0% |
| ! | CTCTAGCAGGTTTTCTCAGT+TGG | - | chr5.2:60238799-60238818 | MS.gene53986:intron | 45.0% |
| ! | GATGGTACTGAGGTTCCATA+TGG | - | chr5.2:60237481-60237500 | MS.gene53986:intron | 45.0% |
| ! | GGGTTTGAGAAGTTGTTTCG+TGG | + | chr5.2:60233431-60233450 | None:intergenic | 45.0% |
| ! | GTGTCTTTCGTTTGTCGGTT+TGG | - | chr5.2:60234105-60234124 | MS.gene53986:CDS | 45.0% |
| ! | GTTTTCACGCATTGTATCCC+AGG | - | chr5.2:60238666-60238685 | MS.gene53986:intron | 45.0% |
| ! | TATTGCCACTTGAACTCCAC+AGG | - | chr5.2:60238422-60238441 | MS.gene53986:intron | 45.0% |
| ! | TGAGGTTCCATATGGGTTGT+TGG | - | chr5.2:60237489-60237508 | MS.gene53986:intron | 45.0% |
| ! | TGAGTTGCATAAGAGCACAG+TGG | - | chr5.2:60236007-60236026 | MS.gene53986:CDS | 45.0% |
| !! | AAGCATTGGTCTGGTGATGT+AGG | - | chr5.2:60234349-60234368 | MS.gene53986:intron | 45.0% |
| !! | CCTGCTATTTCCAAAGAACC+TGG | - | chr5.2:60233754-60233773 | MS.gene53986:intron | 45.0% |
| !! | CTCCTTGTTGTTCAGCTAAC+TGG | + | chr5.2:60239096-60239115 | None:intergenic | 45.0% |
| !! | TTGATGATGTCTGACGTTCC+AGG | - | chr5.2:60236752-60236771 | MS.gene53986:intron | 45.0% |
| !! | TTGGTTTGGTCTACTGGTGT+TGG | - | chr5.2:60237508-60237527 | MS.gene53986:intron | 45.0% |
| !!! | AGCTGGAAGTGTTGGTTTTC+CGG | + | chr5.2:60237936-60237955 | None:intergenic | 45.0% |
| !!! | CCCACCACTTTTGGAATTCA+TGG | - | chr5.2:60236656-60236675 | MS.gene53986:intron | 45.0% |
| !!! | CTTTTGGCTTCCACTTGTGT+TGG | - | chr5.2:60233685-60233704 | MS.gene53986:intron | 45.0% |
| !! | GATAAAAAAATATATATATT+TGG | + | chr5.2:60237725-60237744 | None:intergenic | 5.0% |
| AGTGAGAGATGAAGGGTTGG+TGG | + | chr5.2:60233461-60233480 | None:intergenic | 50.0% | |
| ATCACCAGACCAATGCTTGG+GGG | + | chr5.2:60234347-60234366 | None:intergenic | 50.0% | |
| ATGCAACAAGCCAAACCAGG+AGG | - | chr5.2:60236195-60236214 | MS.gene53986:intron | 50.0% | |
| CAACTGTTGCCATGCTTCCA+AGG | + | chr5.2:60238566-60238585 | None:intergenic | 50.0% | |
| CACCTTTGTCAACTGGTTGG+TGG | + | chr5.2:60237293-60237312 | None:intergenic | 50.0% | |
| CATCACCAGACCAATGCTTG+GGG | + | chr5.2:60234348-60234367 | None:intergenic | 50.0% | |
| CGAAAGTTCAACACTCCTCC+TGG | + | chr5.2:60236213-60236232 | None:intergenic | 50.0% | |
| CGCATTGTATCCCAGGAGAA+AGG | - | chr5.2:60238673-60238692 | MS.gene53986:intron | 50.0% | |
| CTCAAGCGTTCCAACACAAG+TGG | + | chr5.2:60233698-60233717 | None:intergenic | 50.0% | |
| CTGGATCTCCCTAAATCTCC+TGG | - | chr5.2:60237553-60237572 | MS.gene53986:intron | 50.0% | |
| CTGTTGCTGAACCTGTTGCT+AGG | - | chr5.2:60233725-60233744 | MS.gene53986:intron | 50.0% | |
| CTTCCAACAGTTCCTGACAC+TGG | - | chr5.2:60235565-60235584 | MS.gene53986:intron | 50.0% | |
| CTTCCAGTGTCAGGAACTGT+TGG | + | chr5.2:60235571-60235590 | None:intergenic | 50.0% | |
| CTTGGTTGGAGGGTCATTGT+TGG | - | chr5.2:60234161-60234180 | MS.gene53986:CDS | 50.0% | |
| GAACACAGACACTGGATCCT+TGG | - | chr5.2:60236585-60236604 | MS.gene53986:intron | 50.0% | |
| GATCTCCCTAAATCTCCTGG+TGG | - | chr5.2:60237556-60237575 | MS.gene53986:intron | 50.0% | |
| GCTCACCTTTGTCAACTGGT+TGG | + | chr5.2:60237296-60237315 | None:intergenic | 50.0% | |
| GTTCAACACTCCTCCTGGTT+TGG | + | chr5.2:60236208-60236227 | None:intergenic | 50.0% | |
| GTTCCTCCAGCTAATGACAC+GGG | + | chr5.2:60238850-60238869 | None:intergenic | 50.0% | |
| TCCCACCGTTAACTAACAGG+GGG | + | chr5.2:60234472-60234491 | None:intergenic | 50.0% | |
| TCCCTAAATCTCCTGGTGGA+AGG | - | chr5.2:60237560-60237579 | MS.gene53986:intron | 50.0% | |
| TGAGTGGCTTCGTGTTCCTT+CGG | - | chr5.2:60237862-60237881 | MS.gene53986:intron | 50.0% | |
| TGCCACCAACCAGTTGACAA+AGG | - | chr5.2:60237288-60237307 | MS.gene53986:intron | 50.0% | |
| TGCTACCTGTGGAGTTCAAG+TGG | + | chr5.2:60238430-60238449 | None:intergenic | 50.0% | |
| TGTATCCCCGCGTAATCACA+TGG | - | chr5.2:60233651-60233670 | MS.gene53986:intron | 50.0% | |
| TTACACTGTGTGGTTGTCGG+AGG | - | chr5.2:60236883-60236902 | MS.gene53986:intron | 50.0% | |
| ! | CTTCCTTTGATGACCGACTC+AGG | - | chr5.2:60237260-60237279 | MS.gene53986:intron | 50.0% |
| ! | CTTGGAAGCATGGCAACAGT+TGG | - | chr5.2:60238564-60238583 | MS.gene53986:intron | 50.0% |
| ! | GCAGGTTGAATCCTAGCAAC+AGG | + | chr5.2:60233739-60233758 | None:intergenic | 50.0% |
| ! | TAACCCGTGTCATTAGCTGG+AGG | - | chr5.2:60238844-60238863 | MS.gene53986:CDS | 50.0% |
| !! | AGATGAAGGGTTGGTGGTGT+TGG | + | chr5.2:60233455-60233474 | None:intergenic | 50.0% |
| !! | ATGAAGGGTTGGTGGTGTTG+GGG | + | chr5.2:60233453-60233472 | None:intergenic | 50.0% |
| !! | CAGTTGGTTTGTTTGGCGCT+CGG | - | chr5.2:60238815-60238834 | MS.gene53986:CDS | 50.0% |
| !! | GATGAAGGGTTGGTGGTGTT+GGG | + | chr5.2:60233454-60233473 | None:intergenic | 50.0% |
| !! | GGGTTGTTGGTTTGGTCTAC+TGG | - | chr5.2:60237502-60237521 | MS.gene53986:intron | 50.0% |
| !! | TAAACCCCCAAGCATTGGTC+TGG | - | chr5.2:60234340-60234359 | MS.gene53986:intron | 50.0% |
| !! | TAACGGTGGGATTAGTCCCA+CGG | - | chr5.2:60234481-60234500 | MS.gene53986:intron | 50.0% |
| AAGCCACGAGTGGTGGTTCT+CGG | - | chr5.2:60233565-60233584 | MS.gene53986:intron | 55.0% | |
| ACCCCCCTGTTAGTTAACGG+TGG | - | chr5.2:60234467-60234486 | MS.gene53986:intron | 55.0% | |
| AGATGTGGCCCCTTTCTCCT+GGG | + | chr5.2:60238686-60238705 | None:intergenic | 55.0% | |
| AGGAGAAAGGGGCCACATCT+GGG | - | chr5.2:60238686-60238705 | MS.gene53986:intron | 55.0% | |
| CCCACCGTTAACTAACAGGG+GGG | + | chr5.2:60234471-60234490 | None:intergenic | 55.0% | |
| CCCCCCTGTTAGTTAACGGT+GGG | - | chr5.2:60234468-60234487 | MS.gene53986:intron | 55.0% | |
| CGCTTCTCCACTTCAACACC+CGG | - | chr5.2:60233490-60233509 | MS.gene53986:CDS | 55.0% | |
| CTTCCAACAGTTCCCGACAC+TGG | - | chr5.2:60235161-60235180 | MS.gene53986:CDS | 55.0% | |
| GAACTCCACAGGTAGCAGAG+AGG | - | chr5.2:60238433-60238452 | MS.gene53986:intron | 55.0% | |
| GCCGGATGCAGGTTCATGAA+AGG | - | chr5.2:60233598-60233617 | MS.gene53986:intron | 55.0% | |
| GGATGCAGGGATTTCGGAAG+AGG | - | chr5.2:60236846-60236865 | MS.gene53986:intron | 55.0% | |
| GTGCCTGAGTCGGTCATCAA+AGG | + | chr5.2:60237266-60237285 | None:intergenic | 55.0% | |
| TCCATTGGGGCTTCCAGTGT+CGG | + | chr5.2:60235177-60235196 | None:intergenic | 55.0% | |
| TCGTGGCTTCTCGTGTGGTT+TGG | + | chr5.2:60233554-60233573 | None:intergenic | 55.0% | |
| TGGTGGCATAGTGCCTGAGT+CGG | + | chr5.2:60237276-60237295 | None:intergenic | 55.0% | |
| ! | CTTCCAGTGTCGGGAACTGT+TGG | + | chr5.2:60235167-60235186 | None:intergenic | 55.0% |
| ! | GGAGCACAACCCACCACTTT+TGG | - | chr5.2:60236647-60236666 | MS.gene53986:intron | 55.0% |
| ! | TCAGGAGTGCGACTTGTTCG+TGG | - | chr5.2:60237418-60237437 | MS.gene53986:intron | 55.0% |
| ! | TGGGCAAGAGCTGGAAGTGT+TGG | + | chr5.2:60237944-60237963 | None:intergenic | 55.0% |
| !! | GGCTTCTCGTGTGGTTTGGT+TGG | + | chr5.2:60233550-60233569 | None:intergenic | 55.0% |
| !! | GGTTGAACCGGGTGTTGAAG+TGG | + | chr5.2:60233500-60233519 | None:intergenic | 55.0% |
| !! | TGAAGGGTTGGTGGTGTTGG+GGG | + | chr5.2:60233452-60233471 | None:intergenic | 55.0% |
| AACACCCGGTTCAACCGCTC+CGG | - | chr5.2:60233504-60233523 | MS.gene53986:CDS | 60.0% | |
| ACACGAGAAGCCACGAGTGG+TGG | - | chr5.2:60233558-60233577 | MS.gene53986:intron | 60.0% | |
| ACCACACGAGAAGCCACGAG+TGG | - | chr5.2:60233555-60233574 | MS.gene53986:intron | 60.0% | |
| ACCACTCGTGGCTTCTCGTG+TGG | + | chr5.2:60233559-60233578 | None:intergenic | 60.0% | |
| CACATCTGGGCTCGACCTAG+AGG | - | chr5.2:60238699-60238718 | MS.gene53986:intron | 60.0% | |
| CACTGTGTGGTTGTCGGAGG+TGG | - | chr5.2:60236886-60236905 | MS.gene53986:intron | 60.0% | |
| CAGATGTGGCCCCTTTCTCC+TGG | + | chr5.2:60238687-60238706 | None:intergenic | 60.0% | |
| CAGGAGAAAGGGGCCACATC+TGG | - | chr5.2:60238685-60238704 | MS.gene53986:intron | 60.0% | |
| CCACAGGTAGCAGAGAGGCA+AGG | - | chr5.2:60238438-60238457 | MS.gene53986:intron | 60.0% | |
| CCATTGGGGCTTCCAGTGTC+AGG | + | chr5.2:60235176-60235195 | None:intergenic | 60.0% | |
| CCATTGGGGCTTCCAGTGTC+GGG | + | chr5.2:60235176-60235195 | None:intergenic | 60.0% | |
| CCTGACACTGGAAGCCCCAA+TGG | - | chr5.2:60235577-60235596 | MS.gene53986:intron | 60.0% | |
| CCTTGCCTCTCTGCTACCTG+TGG | + | chr5.2:60238441-60238460 | None:intergenic | 60.0% | |
| CTCTAGGTCGAGCCCAGATG+TGG | + | chr5.2:60238701-60238720 | None:intergenic | 60.0% | |
| GGTTGTCGGAGGTGGTCCTA+CGG | - | chr5.2:60236894-60236913 | MS.gene53986:intron | 60.0% | |
| GTTGTCGGAGGTGGTCCTAC+GGG | - | chr5.2:60236895-60236914 | MS.gene53986:intron | 60.0% | |
| ! | AACCGCTCCGGTTCGCTATG+CGG | - | chr5.2:60233516-60233535 | MS.gene53986:CDS | 60.0% |
| !! | GAAGGGTTGGTGGTGTTGGG+GGG | + | chr5.2:60233451-60233470 | None:intergenic | 60.0% |
| AGCCGCATAGCGAACCGGAG+CGG | + | chr5.2:60233521-60233540 | None:intergenic | 65.0% | |
| CCCGACACTGGAAGCCCCAA+TGG | - | chr5.2:60235173-60235192 | MS.gene53986:CDS | 65.0% | |
| CCGAGAGCCGCATAGCGAAC+CGG | + | chr5.2:60233526-60233545 | None:intergenic | 65.0% | |
| CGAACCGGAGCGGTTGAACC+GGG | + | chr5.2:60233511-60233530 | None:intergenic | 65.0% | |
| CGAGTGGTGGTTCTCGGCAC+CGG | - | chr5.2:60233571-60233590 | MS.gene53986:intron | 65.0% | |
| GAACCTGCATCCGGCCCAAC+CGG | + | chr5.2:60233593-60233612 | None:intergenic | 65.0% | |
| GCGAACCGGAGCGGTTGAAC+CGG | + | chr5.2:60233512-60233531 | None:intergenic | 65.0% | |
| GCTGTCTGCACGGCCTCCAT+TGG | + | chr5.2:60238502-60238521 | None:intergenic | 65.0% | |
| GTGCCGAGAACCACCACTCG+TGG | + | chr5.2:60233571-60233590 | None:intergenic | 65.0% | |
| ! | CCGGTTCGCTATGCGGCTCT+CGG | - | chr5.2:60233523-60233542 | MS.gene53986:CDS | 65.0% |
| !! | GGTGGTTCTCGGCACCGGTT+GGG | - | chr5.2:60233576-60233595 | MS.gene53986:intron | 65.0% |
| !! | TGGTGGTTCTCGGCACCGGT+TGG | - | chr5.2:60233575-60233594 | MS.gene53986:intron | 65.0% |
| !! | GTTCTCGGCACCGGTTGGGC+CGG | - | chr5.2:60233580-60233599 | MS.gene53986:intron | 70.0% |
| !! | GCACCGGTTGGGCCGGATGC+AGG | - | chr5.2:60233587-60233606 | MS.gene53986:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 60233388 | 60239246 | 60233388 | ID=MS.gene53986 |
| chr5.2 | mRNA | 60233388 | 60239246 | 60233388 | ID=MS.gene53986.t1;Parent=MS.gene53986 |
| chr5.2 | exon | 60238806 | 60239246 | 60238806 | ID=MS.gene53986.t1.exon1;Parent=MS.gene53986.t1 |
| chr5.2 | CDS | 60238806 | 60239246 | 60238806 | ID=cds.MS.gene53986.t1;Parent=MS.gene53986.t1 |
| chr5.2 | exon | 60235861 | 60236074 | 60235861 | ID=MS.gene53986.t1.exon2;Parent=MS.gene53986.t1 |
| chr5.2 | CDS | 60235861 | 60236074 | 60235861 | ID=cds.MS.gene53986.t1;Parent=MS.gene53986.t1 |
| chr5.2 | exon | 60235620 | 60235780 | 60235620 | ID=MS.gene53986.t1.exon3;Parent=MS.gene53986.t1 |
| chr5.2 | CDS | 60235620 | 60235780 | 60235620 | ID=cds.MS.gene53986.t1;Parent=MS.gene53986.t1 |
| chr5.2 | exon | 60235325 | 60235390 | 60235325 | ID=MS.gene53986.t1.exon4;Parent=MS.gene53986.t1 |
| chr5.2 | CDS | 60235325 | 60235390 | 60235325 | ID=cds.MS.gene53986.t1;Parent=MS.gene53986.t1 |
| chr5.2 | exon | 60235053 | 60235216 | 60235053 | ID=MS.gene53986.t1.exon5;Parent=MS.gene53986.t1 |
| chr5.2 | CDS | 60235053 | 60235216 | 60235053 | ID=cds.MS.gene53986.t1;Parent=MS.gene53986.t1 |
| chr5.2 | exon | 60234670 | 60234784 | 60234670 | ID=MS.gene53986.t1.exon6;Parent=MS.gene53986.t1 |
| chr5.2 | CDS | 60234670 | 60234784 | 60234670 | ID=cds.MS.gene53986.t1;Parent=MS.gene53986.t1 |
| chr5.2 | exon | 60234011 | 60234190 | 60234011 | ID=MS.gene53986.t1.exon7;Parent=MS.gene53986.t1 |
| chr5.2 | CDS | 60234011 | 60234190 | 60234011 | ID=cds.MS.gene53986.t1;Parent=MS.gene53986.t1 |
| chr5.2 | exon | 60233388 | 60233570 | 60233388 | ID=MS.gene53986.t1.exon8;Parent=MS.gene53986.t1 |
| chr5.2 | CDS | 60233388 | 60233570 | 60233388 | ID=cds.MS.gene53986.t1;Parent=MS.gene53986.t1 |
| Gene Sequence |
| Protein sequence |
