Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052562.t1 | XP_003608247.1 | 98.4 | 578 | 8 | 1 | 1 | 577 | 1 | 578 | 0.00E+00 | 1150.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052562.t1 | Q94BV7 | 74.4 | 586 | 137 | 5 | 1 | 577 | 1 | 582 | 1.8e-256 | 886.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052562.t1 | Q2HTY1 | 98.4 | 578 | 8 | 1 | 1 | 577 | 1 | 578 | 0.0e+00 | 1150.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052562 | MS.gene066720 | 0.913614 | 5.02E-84 | -1.69E-46 |
| MS.gene052562 | MS.gene074361 | 0.814448 | 1.53E-51 | -1.69E-46 |
| MS.gene052562 | MS.gene32211 | 0.962881 | 2.08E-121 | -1.69E-46 |
| MS.gene052562 | MS.gene70623 | 0.808647 | 2.79E-50 | -1.69E-46 |
| MS.gene052562 | MS.gene96257 | 0.802246 | 6.14E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052562 | MS.gene069940 | PPI |
| MS.gene048610 | MS.gene052562 | PPI |
| MS.gene02306 | MS.gene052562 | PPI |
| MS.gene052562 | MS.gene53986 | PPI |
| MS.gene009833 | MS.gene052562 | PPI |
| MS.gene052562 | MS.gene066720 | PPI |
| MS.gene052562 | MS.gene91142 | PPI |
| MS.gene064199 | MS.gene052562 | PPI |
| MS.gene046054 | MS.gene052562 | PPI |
| MS.gene32211 | MS.gene052562 | PPI |
| MS.gene052562 | MS.gene03971 | PPI |
| MS.gene052562 | MS.gene33297 | PPI |
| MS.gene048480 | MS.gene052562 | PPI |
| MS.gene50180 | MS.gene052562 | PPI |
| MS.gene052562 | MS.gene002362 | PPI |
| MS.gene88624 | MS.gene052562 | PPI |
| MS.gene01745 | MS.gene052562 | PPI |
| MS.gene052562 | MS.gene57021 | PPI |
| MS.gene01336 | MS.gene052562 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052562.t1 | MTR_4g091240 | 98.443 | 578 | 8 | 1 | 1 | 577 | 1 | 578 | 0.0 | 1184 |
| MS.gene052562.t1 | MTR_2g011730 | 84.429 | 578 | 89 | 1 | 1 | 577 | 1 | 578 | 0.0 | 1022 |
| MS.gene052562.t1 | MTR_4g091240 | 98.701 | 462 | 6 | 0 | 116 | 577 | 13 | 474 | 0.0 | 954 |
| MS.gene052562.t1 | MTR_4g045993 | 68.531 | 572 | 172 | 4 | 6 | 577 | 6 | 569 | 0.0 | 818 |
| MS.gene052562.t1 | MTR_4g045997 | 61.938 | 578 | 208 | 5 | 6 | 577 | 6 | 577 | 0.0 | 756 |
| MS.gene052562.t1 | MTR_4g045997 | 61.343 | 551 | 201 | 5 | 6 | 550 | 6 | 550 | 0.0 | 709 |
| MS.gene052562.t1 | MTR_4g090580 | 38.889 | 360 | 199 | 9 | 50 | 403 | 105 | 449 | 2.50e-71 | 239 |
| MS.gene052562.t1 | MTR_4g090580 | 34.167 | 120 | 70 | 3 | 463 | 577 | 428 | 543 | 3.69e-12 | 69.3 |
| MS.gene052562.t1 | MTR_5g071250 | 41.486 | 323 | 176 | 7 | 50 | 369 | 63 | 375 | 9.83e-64 | 215 |
| MS.gene052562.t1 | MTR_5g071250 | 41.486 | 323 | 176 | 7 | 50 | 369 | 63 | 375 | 3.80e-63 | 216 |
| MS.gene052562.t1 | MTR_5g071250 | 35.833 | 120 | 68 | 2 | 463 | 577 | 386 | 501 | 1.91e-12 | 70.1 |
| MS.gene052562.t1 | MTR_3g464380 | 39.938 | 323 | 181 | 7 | 50 | 369 | 66 | 378 | 7.82e-63 | 215 |
| MS.gene052562.t1 | MTR_3g464380 | 35.537 | 121 | 67 | 4 | 463 | 577 | 389 | 504 | 7.55e-11 | 65.1 |
| MS.gene052562.t1 | MTR_0931s0010 | 27.358 | 318 | 205 | 10 | 76 | 389 | 260 | 555 | 5.15e-24 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052562.t1 | AT4G05020 | 74.403 | 586 | 137 | 5 | 1 | 577 | 1 | 582 | 0.0 | 894 |
| MS.gene052562.t1 | AT4G21490 | 73.070 | 583 | 148 | 4 | 1 | 577 | 1 | 580 | 0.0 | 876 |
| MS.gene052562.t1 | AT4G05020 | 69.984 | 623 | 137 | 6 | 1 | 577 | 1 | 619 | 0.0 | 874 |
| MS.gene052562.t1 | AT4G21490 | 73.070 | 583 | 147 | 5 | 1 | 577 | 1 | 579 | 0.0 | 871 |
| MS.gene052562.t1 | AT2G20800 | 65.874 | 589 | 182 | 5 | 1 | 577 | 1 | 582 | 0.0 | 782 |
| MS.gene052562.t1 | AT4G28220 | 66.794 | 524 | 170 | 2 | 54 | 577 | 52 | 571 | 0.0 | 753 |
| MS.gene052562.t1 | AT4G28220 | 64.114 | 457 | 160 | 2 | 54 | 510 | 52 | 504 | 0.0 | 626 |
| MS.gene052562.t1 | AT2G29990 | 39.815 | 324 | 180 | 8 | 50 | 369 | 70 | 382 | 4.17e-61 | 211 |
| MS.gene052562.t1 | AT2G29990 | 35.000 | 120 | 69 | 3 | 463 | 577 | 393 | 508 | 2.69e-11 | 66.6 |
| MS.gene052562.t1 | AT1G07180 | 40.000 | 325 | 178 | 8 | 50 | 369 | 72 | 384 | 6.19e-61 | 210 |
| MS.gene052562.t1 | AT1G07180 | 38.333 | 120 | 65 | 3 | 463 | 577 | 395 | 510 | 5.25e-14 | 75.1 |
Find 123 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGGTCCTATTAGATTT+AGG | 0.142882 | 4.3:-22773170 | MS.gene052562:CDS |
| TGGATGAGACGCTTTATATT+TGG | 0.179925 | 4.3:-22772517 | MS.gene052562:CDS |
| GGAGAATTGCCATTTCTTAA+AGG | 0.238763 | 4.3:-22775051 | MS.gene052562:intron |
| TTCCATCCGGTTAAAACATT+TGG | 0.311503 | 4.3:+22773209 | None:intergenic |
| TAGAGAAACGTTGGAAGAAT+TGG | 0.312213 | 4.3:+22776524 | None:intergenic |
| ACTTACACTCAAAGAATTTC+AGG | 0.318131 | 4.3:-22773561 | MS.gene052562:CDS |
| AGAAGGTCCTATTAGATTTA+GGG | 0.323652 | 4.3:-22773169 | MS.gene052562:CDS |
| ATGCAGTGGCGGTGGTCTTT+TGG | 0.324109 | 4.3:-22776215 | MS.gene052562:intron |
| GGATGAGACGCTTTATATTT+GGG | 0.330621 | 4.3:-22772516 | MS.gene052562:CDS |
| CCTTCTCCCCTAAATCTAAT+AGG | 0.330735 | 4.3:+22773162 | None:intergenic |
| CTAAATCTAATAGGACCTTC+TGG | 0.336066 | 4.3:+22773171 | None:intergenic |
| TTTAGGTCAATTTGCTCCTC+TGG | 0.342609 | 4.3:-22772813 | MS.gene052562:CDS |
| TCCTCAAGGTACAAGCATTT+AGG | 0.348514 | 4.3:-22772830 | MS.gene052562:intron |
| AAAAGTTTACCTTTAAGAAA+TGG | 0.366458 | 4.3:+22775042 | None:intergenic |
| ATCGGTGCCGGAAAAGAAAA+AGG | 0.369089 | 4.3:-22776164 | MS.gene052562:CDS |
| TCCATGGTTGTGAAAGTATC+TGG | 0.369865 | 4.3:-22774324 | MS.gene052562:CDS |
| CCTGGAGATTGGGTTTCAAT+TGG | 0.380512 | 4.3:-22772764 | MS.gene052562:CDS |
| CTGGCGCACAAGGGCGTTAG+TGG | 0.385603 | 4.3:-22772548 | MS.gene052562:CDS |
| GTCATCGGTTCAAGCCCTTC+AGG | 0.387915 | 4.3:-22773137 | MS.gene052562:intron |
| GATGGTATTGATGTGAAAAC+AGG | 0.394769 | 4.3:-22774348 | MS.gene052562:CDS |
| CTGCACAGCTACCTGGAGAT+TGG | 0.399659 | 4.3:-22772775 | MS.gene052562:CDS |
| TGCACAGCTACCTGGAGATT+GGG | 0.402557 | 4.3:-22772774 | MS.gene052562:CDS |
| AGCAAGTCAGCTGGCGCACA+AGG | 0.404231 | 4.3:-22772558 | MS.gene052562:CDS |
| TGACCTTCCTGAAGATATTA+CGG | 0.408050 | 4.3:+22775975 | None:intergenic |
| GTTAGTGCTGGGAACTGGTT+GGG | 0.424018 | 4.3:-22776140 | MS.gene052562:CDS |
| TTCCATATGGAATGGCTGTC+TGG | 0.426693 | 4.3:-22774251 | MS.gene052562:CDS |
| ATTGTTGGAGGTGGTCCAAC+TGG | 0.442199 | 4.3:-22774729 | MS.gene052562:CDS |
| GGAATGGCTGTCTGGTCAAC+TGG | 0.449853 | 4.3:-22774243 | MS.gene052562:CDS |
| CAATTGGACACAGCAGTCAA+TGG | 0.450596 | 4.3:-22772748 | MS.gene052562:CDS |
| TTTAGTTAAAATCACGCTCC+TGG | 0.452080 | 4.3:-22774634 | MS.gene052562:CDS |
| GCTGTCTGGTCAACTGGTAT+TGG | 0.452937 | 4.3:-22774237 | MS.gene052562:CDS |
| TTAGGTCAATTTGCTCCTCT+GGG | 0.455111 | 4.3:-22772812 | MS.gene052562:CDS |
| ATTTCTTCCTGCTACAGCTC+AGG | 0.463798 | 4.3:-22773360 | MS.gene052562:intron |
| AACCCGTCCGTAATATCTTC+AGG | 0.464325 | 4.3:-22775982 | MS.gene052562:CDS |
| GAAATTACTACAATTCCATA+TGG | 0.465806 | 4.3:-22774264 | MS.gene052562:CDS |
| CAGACAGCTGCACAGCTACC+TGG | 0.466175 | 4.3:-22772782 | MS.gene052562:CDS |
| AAAATCACGCTCCTGGAGGC+TGG | 0.469714 | 4.3:-22774627 | MS.gene052562:CDS |
| GTCAACACATTTAATACTCC+TGG | 0.471749 | 4.3:-22775080 | MS.gene052562:CDS |
| TCTCAATGATCCGCGATATG+AGG | 0.475412 | 4.3:-22776095 | MS.gene052562:CDS |
| TGAACAGCAAGCAAGTCAGC+TGG | 0.476723 | 4.3:-22772567 | MS.gene052562:intron |
| GACCAGACAGCCATTCCATA+TGG | 0.477712 | 4.3:+22774249 | None:intergenic |
| GGGCGTTAGTGGTGTCAGAC+TGG | 0.480699 | 4.3:-22772537 | MS.gene052562:CDS |
| ATTTGGTCAAATTATACCCT+GGG | 0.483128 | 4.3:-22774665 | MS.gene052562:CDS |
| TCCGGTTAAAACATTTGGCC+AGG | 0.485943 | 4.3:+22773214 | None:intergenic |
| GGCTGTTGCTACATCTGAAT+CGG | 0.493043 | 4.3:-22776182 | MS.gene052562:CDS |
| TGCTACATCTGAATCGGTGC+CGG | 0.503421 | 4.3:-22776176 | MS.gene052562:CDS |
| CCTATTAGATTTAGGGGAGA+AGG | 0.510034 | 4.3:-22773162 | MS.gene052562:CDS |
| AGATATGACCTCCAGCCTCC+AGG | 0.510188 | 4.3:+22774616 | None:intergenic |
| GATGAATGGTTGAGAGTTGA+GGG | 0.510295 | 4.3:-22774034 | MS.gene052562:CDS |
| GTGCTGGGAACTGGTTGGGC+AGG | 0.512186 | 4.3:-22776136 | MS.gene052562:CDS |
| GCCAGATACTTTCACAACCA+TGG | 0.514707 | 4.3:+22774323 | None:intergenic |
| ACATGCACCTGAGCTGTAGC+AGG | 0.524127 | 4.3:+22773353 | None:intergenic |
| TTCTCCTCTGCACCACCGTA+AGG | 0.527460 | 4.3:-22776465 | MS.gene052562:intron |
| ACCAAGTGCATACACATTGT+CGG | 0.529575 | 4.3:+22774009 | None:intergenic |
| CACAATGCTGCGAGCCTCAA+CGG | 0.529988 | 4.3:+22776006 | None:intergenic |
| ATCTCAGCAAGGCACCTACC+TGG | 0.530971 | 4.3:-22773232 | MS.gene052562:CDS |
| CAACCATTCATCAGTAGCTA+TGG | 0.531358 | 4.3:+22774045 | None:intergenic |
| GACACAGCAGTCAATGGTTG+TGG | 0.536831 | 4.3:-22772742 | MS.gene052562:CDS |
| GCTGCAAACTCCACTCCAGT+TGG | 0.542620 | 4.3:+22774714 | None:intergenic |
| TACTACAATTCCATATGGAA+TGG | 0.546074 | 4.3:-22774259 | MS.gene052562:CDS |
| GAAGACAAGTTCAAAAGAGA+TGG | 0.546988 | 4.3:-22774366 | MS.gene052562:CDS |
| TTAGGGGAGAAGGGCGTCAT+CGG | 0.550655 | 4.3:-22773152 | MS.gene052562:CDS |
| TGATCTGCTGAAGGAATCCA+AGG | 0.552762 | 4.3:-22773462 | MS.gene052562:CDS |
| CTCTCTTCATCACTCACACT+AGG | 0.557534 | 4.3:+22774774 | None:intergenic |
| ATTTAATACTCCTGGTGTCA+CGG | 0.557915 | 4.3:-22775072 | MS.gene052562:CDS |
| TGTTAGTGCTGGGAACTGGT+TGG | 0.558983 | 4.3:-22776141 | MS.gene052562:CDS |
| GAAGGTCCTATTAGATTTAG+GGG | 0.561054 | 4.3:-22773168 | MS.gene052562:CDS |
| AAGGTGTTAGTGCTGGGAAC+TGG | 0.561409 | 4.3:-22776145 | MS.gene052562:CDS |
| CCAATTGAAACCCAATCTCC+AGG | 0.561657 | 4.3:+22772764 | None:intergenic |
| TGGCAATTCTCCGTGACACC+AGG | 0.563016 | 4.3:+22775062 | None:intergenic |
| CAAGTAACACTAGGCAGCAG+AGG | 0.567935 | 4.3:+22776034 | None:intergenic |
| GGGCAGGAACAAGTTTCTTG+AGG | 0.568076 | 4.3:-22776120 | MS.gene052562:CDS |
| TTTCATCTCGGAGTCCACAT+TGG | 0.569558 | 4.3:+22773382 | None:intergenic |
| TTTGGTTGATGCAGTGGCGG+TGG | 0.573376 | 4.3:-22776223 | MS.gene052562:intron |
| CTATTAGATTTAGGGGAGAA+GGG | 0.575641 | 4.3:-22773161 | MS.gene052562:CDS |
| TGATGAATGGTTGAGAGTTG+AGG | 0.576334 | 4.3:-22774035 | MS.gene052562:CDS |
| GTTAAAACATTTGGCCAGGT+AGG | 0.579618 | 4.3:+22773218 | None:intergenic |
| GAGACGCTTTATATTTGGGA+GGG | 0.588717 | 4.3:-22772512 | MS.gene052562:CDS |
| CGTTGAGGCTCGCAGCATTG+TGG | 0.589439 | 4.3:-22776005 | MS.gene052562:CDS |
| CATCTGTGAAAGGTACCCTC+AGG | 0.589511 | 4.3:-22773525 | MS.gene052562:CDS |
| GATTTGGTCAAATTATACCC+TGG | 0.591979 | 4.3:-22774666 | MS.gene052562:CDS |
| TGGAGGTGGTCCAACTGGAG+TGG | 0.598114 | 4.3:-22774724 | MS.gene052562:CDS |
| AATAAACCAGCGAAAAGTCA+TGG | 0.602197 | 4.3:-22773975 | MS.gene052562:intron |
| TGATGTGAAAACAGGATCCA+TGG | 0.603473 | 4.3:-22774340 | MS.gene052562:CDS |
| CTAAAGAATAAACAGATGCA+TGG | 0.603919 | 4.3:-22773491 | MS.gene052562:CDS |
| CTTCCTGAAGATATTACGGA+CGG | 0.605747 | 4.3:+22775979 | None:intergenic |
| GCTGTCTGCTCGCCTCCCAG+AGG | 0.606207 | 4.3:+22772797 | None:intergenic |
| TGGCATTGCTGATCTGCTGA+AGG | 0.609063 | 4.3:-22773471 | MS.gene052562:CDS |
| ACCGACAATGTGTATGCACT+TGG | 0.609604 | 4.3:-22774010 | MS.gene052562:CDS |
| GGGACTCGAGTCAAATCTGA+AGG | 0.611059 | 4.3:-22772492 | None:intergenic |
| CTGTGAAAGGTACCCTCAGG+TGG | 0.613916 | 4.3:-22773522 | MS.gene052562:CDS |
| AAGACTGATGCAGACAACTC+AGG | 0.615045 | 4.3:-22773587 | MS.gene052562:CDS |
| TGTGGTATTCTGTCTATGCA+AGG | 0.616119 | 4.3:-22772724 | MS.gene052562:intron |
| TGTTACTTGCGGTACCGTTG+AGG | 0.617158 | 4.3:-22776020 | MS.gene052562:CDS |
| TTCCTGAAGATATTACGGAC+GGG | 0.617206 | 4.3:+22775980 | None:intergenic |
| GTGAAAGTAAAATAATTGCG+AGG | 0.621038 | 4.3:+22776058 | None:intergenic |
| GACATCTTCTTACCTTACGG+TGG | 0.621876 | 4.3:+22776453 | None:intergenic |
| CTTACCTTACGGTGGTGCAG+AGG | 0.628766 | 4.3:+22776461 | None:intergenic |
| GTGCCATAGCTACTGATGAA+TGG | 0.630752 | 4.3:-22774048 | MS.gene052562:CDS |
| AGCAGGAAGAAATTTCATCT+CGG | 0.631522 | 4.3:+22773370 | None:intergenic |
| TGAGACGCTTTATATTTGGG+AGG | 0.636157 | 4.3:-22772513 | MS.gene052562:CDS |
| CGTCCGTAATATCTTCAGGA+AGG | 0.637693 | 4.3:-22775978 | MS.gene052562:intron |
| TAATGAATGACATCTGTGAA+AGG | 0.638141 | 4.3:-22773535 | MS.gene052562:CDS |
| ACATGATCAAGTTACCTGAA+GGG | 0.639498 | 4.3:+22773123 | None:intergenic |
| TTAGATATAGCTCCACCTGA+GGG | 0.642435 | 4.3:+22773510 | None:intergenic |
| AGTTAAAATCACGCTCCTGG+AGG | 0.643487 | 4.3:-22774631 | MS.gene052562:CDS |
| GACTACTTAATCATAGCTGT+AGG | 0.644316 | 4.3:-22775110 | MS.gene052562:CDS |
| GGTCAATTTGCTCCTCTGGG+AGG | 0.646230 | 4.3:-22772809 | MS.gene052562:CDS |
| ACGGTACCGCAAGTAACACT+AGG | 0.649646 | 4.3:+22776025 | None:intergenic |
| TCCATTCGAACAGAAACATG+TGG | 0.650878 | 4.3:-22775249 | MS.gene052562:intron |
| TTTAGATATAGCTCCACCTG+AGG | 0.651676 | 4.3:+22773509 | None:intergenic |
| ATCACGCTCCTGGAGGCTGG+AGG | 0.653143 | 4.3:-22774624 | MS.gene052562:CDS |
| TATCAGGTTGCATCTCAGCA+AGG | 0.653961 | 4.3:-22773243 | MS.gene052562:intron |
| CTGAGAGTCATAGTCACGGA+GGG | 0.657023 | 4.3:+22776498 | None:intergenic |
| TACACTCAAAGAATTTCAGG+AGG | 0.672157 | 4.3:-22773558 | MS.gene052562:CDS |
| GCAAGTCAGCTGGCGCACAA+GGG | 0.679550 | 4.3:-22772557 | MS.gene052562:CDS |
| CTGCTGCCTAGTGTTACTTG+CGG | 0.683107 | 4.3:-22776031 | MS.gene052562:CDS |
| ACTGACAAAATCATGAAGTG+CGG | 0.684789 | 4.3:+22774692 | None:intergenic |
| TGAACTGAGAGTCATAGTCA+CGG | 0.698840 | 4.3:+22776494 | None:intergenic |
| ACGACGTGAACCTCATATCG+CGG | 0.706010 | 4.3:+22776085 | None:intergenic |
| GATCTGCTGAAGGAATCCAA+GGG | 0.715092 | 4.3:-22773461 | MS.gene052562:CDS |
| TTTGGTCAAATTATACCCTG+GGG | 0.717356 | 4.3:-22774664 | MS.gene052562:CDS |
| ACTGAGAGTCATAGTCACGG+AGG | 0.761572 | 4.3:+22776497 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATGAATTTTTTTTATTTTA+TGG | - | chr4.3:22773464-22773483 | MS.gene052562:CDS | 10.0% |
| !! | ATATAAGACAAACATTAATT+TGG | + | chr4.3:22773425-22773444 | None:intergenic | 15.0% |
| !! | ATCATTTATTTAATTAACAC+AGG | - | chr4.3:22775104-22775123 | MS.gene052562:CDS | 15.0% |
| !! | ATTTATTATTTACTTGACAT+TGG | - | chr4.3:22774936-22774955 | MS.gene052562:intron | 15.0% |
| !! | CTAATTAAGTAGAATTTAAT+CGG | + | chr4.3:22772685-22772704 | None:intergenic | 15.0% |
| !! | TGTGTTAATTAAATAAATGA+TGG | + | chr4.3:22775105-22775124 | None:intergenic | 15.0% |
| !! | TTTATGAATTAATTATGGTT+TGG | - | chr4.3:22772789-22772808 | MS.gene052562:CDS | 15.0% |
| !!! | TCATATTTTTGTTCATTTAT+TGG | - | chr4.3:22773614-22773633 | MS.gene052562:CDS | 15.0% |
| !!! | TGTAAATTAAACTTATCTTT+TGG | - | chr4.3:22773526-22773545 | MS.gene052562:CDS | 15.0% |
| !! | AAAAAAAATTCATGTACATG+TGG | + | chr4.3:22773458-22773477 | None:intergenic | 20.0% |
| !! | AAAAAAATTCATGTACATGT+GGG | + | chr4.3:22773457-22773476 | None:intergenic | 20.0% |
| !! | AAAGAGAATGATAAAAGTAA+AGG | + | chr4.3:22776103-22776122 | None:intergenic | 20.0% |
| !! | AACTAAAAACCAAAAAAACA+TGG | + | chr4.3:22774143-22774162 | None:intergenic | 20.0% |
| !! | CTGATTGTTAAATTGAATTT+CGG | - | chr4.3:22775388-22775407 | MS.gene052562:intron | 20.0% |
| !! | TAATAGATCTACGAAAATTT+CGG | - | chr4.3:22772727-22772746 | MS.gene052562:CDS | 20.0% |
| !!! | AAAAGTTTACCTTTAAGAAA+TGG | + | chr4.3:22773991-22774010 | None:intergenic | 20.0% |
| !!! | AAAGATTTTATGACACAAAT+TGG | - | chr4.3:22774832-22774851 | MS.gene052562:CDS | 20.0% |
| !!! | AACATTTGAAATTCAAAGAA+CGG | + | chr4.3:22775355-22775374 | None:intergenic | 20.0% |
| !!! | ATTTAGAAATCGATTTGATT+TGG | - | chr4.3:22774521-22774540 | MS.gene052562:intron | 20.0% |
| !!! | GTCATAAAATCTTTTATGAA+TGG | + | chr4.3:22774826-22774845 | None:intergenic | 20.0% |
| !!! | TATTCTCATGCTTATTTTTT+AGG | - | chr4.3:22774614-22774633 | MS.gene052562:CDS | 20.0% |
| !!! | TTGGTTCATTTTTTTTTATC+TGG | - | chr4.3:22773545-22773564 | MS.gene052562:CDS | 20.0% |
| ! | AATTCAATTTAACAATCAGC+AGG | + | chr4.3:22775387-22775406 | None:intergenic | 25.0% |
| ! | AATTTCAAACCATTTACCTA+TGG | - | chr4.3:22773336-22773355 | MS.gene052562:intron | 25.0% |
| ! | ACCACTAAAGAAATGAAAAA+TGG | - | chr4.3:22774739-22774758 | MS.gene052562:CDS | 25.0% |
| ! | ACTAAAGAAATGAAAAATGG+AGG | - | chr4.3:22774742-22774761 | MS.gene052562:CDS | 25.0% |
| ! | GAAATTACTACAATTCCATA+TGG | - | chr4.3:22774766-22774785 | MS.gene052562:CDS | 25.0% |
| ! | GTGTATTAAAGACAATTCTA+TGG | - | chr4.3:22775301-22775320 | MS.gene052562:intron | 25.0% |
| ! | TTTGGCGTCTAATTATAAAT+AGG | - | chr4.3:22773662-22773681 | MS.gene052562:intron | 25.0% |
| !! | AAAAAACTGTTAGTCTCATA+AGG | - | chr4.3:22776400-22776419 | MS.gene052562:intron | 25.0% |
| !! | AAATTGAATTTCGGCATTTT+AGG | - | chr4.3:22775397-22775416 | MS.gene052562:intron | 25.0% |
| !! | TAAATAGGAGATACATTTTG+TGG | - | chr4.3:22773677-22773696 | MS.gene052562:intron | 25.0% |
| !! | TAATGAACTAAGGCATTAAA+CGG | + | chr4.3:22773730-22773749 | None:intergenic | 25.0% |
| !! | TTTCCTATATTCCATTCTTT+TGG | - | chr4.3:22775155-22775174 | MS.gene052562:CDS | 25.0% |
| !!! | ATTCTTCATTTTGCTATTGT+TGG | - | chr4.3:22774286-22774305 | MS.gene052562:CDS | 25.0% |
| !!! | TCCATTTTTCATTTCTTTAG+TGG | + | chr4.3:22774743-22774762 | None:intergenic | 25.0% |
| !!! | TTTGTTTGTCCATGTTTTTT+TGG | - | chr4.3:22774131-22774150 | MS.gene052562:intron | 25.0% |
| AAATTCTGCAATTTCATCCA+CGG | + | chr4.3:22776033-22776052 | None:intergenic | 30.0% | |
| AACAGTTAATCATAAGCTGT+TGG | - | chr4.3:22773389-22773408 | MS.gene052562:CDS | 30.0% | |
| AATAGTTAGTGGAGATGAAT+TGG | - | chr4.3:22774074-22774093 | MS.gene052562:intron | 30.0% | |
| AATCACACTTTAGTCATCAT+TGG | + | chr4.3:22774107-22774126 | None:intergenic | 30.0% | |
| ACAGTTAATCATAAGCTGTT+GGG | - | chr4.3:22773390-22773409 | MS.gene052562:CDS | 30.0% | |
| ACTTACACTCAAAGAATTTC+AGG | - | chr4.3:22775469-22775488 | MS.gene052562:intron | 30.0% | |
| AGAAGGTCCTATTAGATTTA+GGG | - | chr4.3:22775861-22775880 | MS.gene052562:intron | 30.0% | |
| ATTTGGTCAAATTATACCCT+GGG | - | chr4.3:22774365-22774384 | MS.gene052562:CDS | 30.0% | |
| CATCCAAAAGAATGGAATAT+AGG | + | chr4.3:22775161-22775180 | None:intergenic | 30.0% | |
| CTAAAGAATAAACAGATGCA+TGG | - | chr4.3:22775539-22775558 | MS.gene052562:intron | 30.0% | |
| GTACTCATAGATGCAAATAA+TGG | + | chr4.3:22774499-22774518 | None:intergenic | 30.0% | |
| GTGAAAGTAAAATAATTGCG+AGG | + | chr4.3:22772975-22772994 | None:intergenic | 30.0% | |
| GTTATTGTAAATAACGCCAT+AGG | + | chr4.3:22773355-22773374 | None:intergenic | 30.0% | |
| TAAATAACGCCATAGGTAAA+TGG | + | chr4.3:22773348-22773367 | None:intergenic | 30.0% | |
| TAATGAATGACATCTGTGAA+AGG | - | chr4.3:22775495-22775514 | MS.gene052562:intron | 30.0% | |
| TACTACAATTCCATATGGAA+TGG | - | chr4.3:22774771-22774790 | MS.gene052562:CDS | 30.0% | |
| TAGATCTCAGTGTTATCAAA+TGG | - | chr4.3:22775943-22775962 | MS.gene052562:intron | 30.0% | |
| TATCCACTAGTAATGAACTA+AGG | + | chr4.3:22773740-22773759 | None:intergenic | 30.0% | |
| TGCAGTTAAGAAATAGTTAG+TGG | - | chr4.3:22774063-22774082 | MS.gene052562:intron | 30.0% | |
| TTCGAATGGAAACAAGTAAA+AGG | + | chr4.3:22773771-22773790 | None:intergenic | 30.0% | |
| ! | ACTAACACCTTTTTCTTTTC+CGG | + | chr4.3:22772876-22772895 | None:intergenic | 30.0% |
| ! | CTATATTCCATTCTTTTGGA+TGG | - | chr4.3:22775159-22775178 | MS.gene052562:CDS | 30.0% |
| ! | GGATGAAATTGCAGAATTTT+GGG | - | chr4.3:22776034-22776053 | MS.gene052562:CDS | 30.0% |
| ! | TAACTAAATCTTTTACCCCA+GGG | + | chr4.3:22774384-22774403 | None:intergenic | 30.0% |
| ! | TAGGAAAAGTATAAGACACT+AGG | + | chr4.3:22775142-22775161 | None:intergenic | 30.0% |
| ! | TCATTACTAGTGGATATAAC+TGG | - | chr4.3:22773744-22773763 | MS.gene052562:intron | 30.0% |
| ! | TCTAAAGTGGATAAAACAGA+AGG | + | chr4.3:22772634-22772653 | None:intergenic | 30.0% |
| ! | TGGATGAAATTGCAGAATTT+TGG | - | chr4.3:22776033-22776052 | MS.gene052562:CDS | 30.0% |
| ! | TTAACTAAATCTTTTACCCC+AGG | + | chr4.3:22774385-22774404 | None:intergenic | 30.0% |
| ! | TTGTTTGGTGATATGACTTT+GGG | - | chr4.3:22775750-22775769 | MS.gene052562:intron | 30.0% |
| ! | TTTGTTTGGTGATATGACTT+TGG | - | chr4.3:22775749-22775768 | MS.gene052562:intron | 30.0% |
| ! | TTTTATGACACAAATTGGTC+AGG | - | chr4.3:22774837-22774856 | MS.gene052562:CDS | 30.0% |
| !! | AAATCGATTTGATTTGGTGA+TGG | - | chr4.3:22774527-22774546 | MS.gene052562:intron | 30.0% |
| !! | TGTTTCTGCTTTTGTTTGTT+TGG | - | chr4.3:22775735-22775754 | MS.gene052562:intron | 30.0% |
| !!! | GGTTTTTGAAACTACATATC+AGG | - | chr4.3:22775771-22775790 | MS.gene052562:intron | 30.0% |
| !!! | TTCTTTTTTAACATCTCCCT+TGG | + | chr4.3:22775588-22775607 | None:intergenic | 30.0% |
| AACATGATCAAGTTACCTGA+AGG | + | chr4.3:22775911-22775930 | None:intergenic | 35.0% | |
| AATAAACCAGCGAAAAGTCA+TGG | - | chr4.3:22775055-22775074 | MS.gene052562:CDS | 35.0% | |
| AATGTGTCCATCCAAAAGAA+TGG | + | chr4.3:22775169-22775188 | None:intergenic | 35.0% | |
| AATTTCATCCACGGTTATGA+TGG | + | chr4.3:22776024-22776043 | None:intergenic | 35.0% | |
| ACATGATCAAGTTACCTGAA+GGG | + | chr4.3:22775910-22775929 | None:intergenic | 35.0% | |
| ACATTTATCATGTCAGAGAC+TGG | + | chr4.3:22773149-22773168 | None:intergenic | 35.0% | |
| ACCATTAAAGTGAATGCTAC+AGG | + | chr4.3:22775714-22775733 | None:intergenic | 35.0% | |
| ACTGACAAAATCATGAAGTG+CGG | + | chr4.3:22774341-22774360 | None:intergenic | 35.0% | |
| AGCAGGAAGAAATTTCATCT+CGG | + | chr4.3:22775663-22775682 | None:intergenic | 35.0% | |
| AGTGTTATCAAATGGCAGTA+TGG | - | chr4.3:22775951-22775970 | MS.gene052562:intron | 35.0% | |
| ATGCCTTAGTTCATTACTAG+TGG | - | chr4.3:22773734-22773753 | MS.gene052562:intron | 35.0% | |
| ATTTCATCCACGGTTATGAT+GGG | + | chr4.3:22776023-22776042 | None:intergenic | 35.0% | |
| CAGAAGGTCCTATTAGATTT+AGG | - | chr4.3:22775860-22775879 | MS.gene052562:intron | 35.0% | |
| CTAAATCTAATAGGACCTTC+TGG | + | chr4.3:22775862-22775881 | None:intergenic | 35.0% | |
| CTATTAGATTTAGGGGAGAA+GGG | - | chr4.3:22775869-22775888 | MS.gene052562:intron | 35.0% | |
| GAAGACAAGTTCAAAAGAGA+TGG | - | chr4.3:22774664-22774683 | MS.gene052562:CDS | 35.0% | |
| GAAGGTCCTATTAGATTTAG+GGG | - | chr4.3:22775862-22775881 | MS.gene052562:intron | 35.0% | |
| GACTACTTAATCATAGCTGT+AGG | - | chr4.3:22773920-22773939 | MS.gene052562:intron | 35.0% | |
| GAGTGTGAAAAAAATCCAGA+AGG | - | chr4.3:22775844-22775863 | MS.gene052562:intron | 35.0% | |
| GATGACATCTTCTTACCTTA+CGG | + | chr4.3:22772583-22772602 | None:intergenic | 35.0% | |
| GGATGAGACGCTTTATATTT+GGG | - | chr4.3:22776514-22776533 | MS.gene052562:CDS | 35.0% | |
| GTAGAATTTAATCGGCGTTA+CGG | + | chr4.3:22772677-22772696 | None:intergenic | 35.0% | |
| GTCAACACATTTAATACTCC+TGG | - | chr4.3:22773950-22773969 | MS.gene052562:intron | 35.0% | |
| TAATCATAAGCTGTTGGGTT+TGG | - | chr4.3:22773395-22773414 | MS.gene052562:CDS | 35.0% | |
| TAATGCACCAGTAAGAAACA+CGG | + | chr4.3:22773261-22773280 | None:intergenic | 35.0% | |
| TACACTCAAAGAATTTCAGG+AGG | - | chr4.3:22775472-22775491 | MS.gene052562:intron | 35.0% | |
| TAGAGAAACGTTGGAAGAAT+TGG | + | chr4.3:22772509-22772528 | None:intergenic | 35.0% | |
| TCATTAGCATGTGACATAGT+TGG | - | chr4.3:22773305-22773324 | MS.gene052562:intron | 35.0% | |
| TCCTGTAGCATTCACTTTAA+TGG | - | chr4.3:22775710-22775729 | MS.gene052562:intron | 35.0% | |
| TGAAAAAGAAGAATTCGTCG+TGG | - | chr4.3:22773892-22773911 | MS.gene052562:intron | 35.0% | |
| TGACACAAACAAGTCAACAT+GGG | + | chr4.3:22773210-22773229 | None:intergenic | 35.0% | |
| TGACCTTCCTGAAGATATTA+CGG | + | chr4.3:22773058-22773077 | None:intergenic | 35.0% | |
| TGGATGAGACGCTTTATATT+TGG | - | chr4.3:22776513-22776532 | MS.gene052562:CDS | 35.0% | |
| TTCCATCCGGTTAAAACATT+TGG | + | chr4.3:22775824-22775843 | None:intergenic | 35.0% | |
| TTTAGTTAAAATCACGCTCC+TGG | - | chr4.3:22774396-22774415 | MS.gene052562:CDS | 35.0% | |
| TTTGGTCAAATTATACCCTG+GGG | - | chr4.3:22774366-22774385 | MS.gene052562:CDS | 35.0% | |
| ! | ACTTCATGATTTTGTCAGTG+AGG | - | chr4.3:22774342-22774361 | MS.gene052562:CDS | 35.0% |
| ! | ATTTAATACTCCTGGTGTCA+CGG | - | chr4.3:22773958-22773977 | MS.gene052562:intron | 35.0% |
| ! | CAATAAAACATGCACTGATG+AGG | + | chr4.3:22776179-22776198 | None:intergenic | 35.0% |
| ! | GATTTGGTCAAATTATACCC+TGG | - | chr4.3:22774364-22774383 | MS.gene052562:CDS | 35.0% |
| ! | GGAGAATTGCCATTTCTTAA+AGG | - | chr4.3:22773979-22773998 | MS.gene052562:CDS | 35.0% |
| ! | TGATTTTGTCAGTGAGGATT+TGG | - | chr4.3:22774348-22774367 | MS.gene052562:CDS | 35.0% |
| !! | AAAGAAAAAGGTGTTAGTGC+TGG | - | chr4.3:22772878-22772897 | MS.gene052562:intron | 35.0% |
| !! | AAGAAAAAGGTGTTAGTGCT+GGG | - | chr4.3:22772879-22772898 | MS.gene052562:intron | 35.0% |
| !! | AGAGGAATCTTGTTCTAAAG+TGG | + | chr4.3:22772647-22772666 | None:intergenic | 35.0% |
| !! | GATGGTATTGATGTGAAAAC+AGG | - | chr4.3:22774682-22774701 | MS.gene052562:CDS | 35.0% |
| !! | GCATGTTTTATTGTTCCTCA+AGG | - | chr4.3:22776186-22776205 | MS.gene052562:CDS | 35.0% |
| !! | GGCATTTTAGGAAGATATTG+CGG | - | chr4.3:22775409-22775428 | MS.gene052562:intron | 35.0% |
| !!! | CTTCATTTTGCTATTGTTGG+AGG | - | chr4.3:22774289-22774308 | MS.gene052562:CDS | 35.0% |
| !!! | GTGTTTCACAGCATTTTTTG+TGG | - | chr4.3:22774024-22774043 | MS.gene052562:CDS | 35.0% |
| !!! | TTTTTTCACACTCTTCCATC+CGG | + | chr4.3:22775837-22775856 | None:intergenic | 35.0% |
| ACCAAGTGCATACACATTGT+CGG | + | chr4.3:22775024-22775043 | None:intergenic | 40.0% | |
| ACCTAAATGCTTGTACCTTG+AGG | + | chr4.3:22776204-22776223 | None:intergenic | 40.0% | |
| AGACAATTCTATGGACGATC+TGG | - | chr4.3:22775310-22775329 | MS.gene052562:intron | 40.0% | |
| AGAGCACGAGAAAAATGACA+TGG | + | chr4.3:22774909-22774928 | None:intergenic | 40.0% | |
| CAACCATTCATCAGTAGCTA+TGG | + | chr4.3:22774988-22775007 | None:intergenic | 40.0% | |
| CCTATTAGATTTAGGGGAGA+AGG | - | chr4.3:22775868-22775887 | MS.gene052562:intron | 40.0% | |
| CCTTCTCCCCTAAATCTAAT+AGG | + | chr4.3:22775871-22775890 | None:intergenic | 40.0% | |
| CGAAAAGTCATGGTACCTAT+TGG | - | chr4.3:22775065-22775084 | MS.gene052562:CDS | 40.0% | |
| CTGACACAAACAAGTCAACA+TGG | + | chr4.3:22773211-22773230 | None:intergenic | 40.0% | |
| CTTCCTGAAGATATTACGGA+CGG | + | chr4.3:22773054-22773073 | None:intergenic | 40.0% | |
| GACAATTCTATGGACGATCT+GGG | - | chr4.3:22775311-22775330 | MS.gene052562:intron | 40.0% | |
| GAGAAATAGCATCAGCCAAT+AGG | + | chr4.3:22775083-22775102 | None:intergenic | 40.0% | |
| GAGACGCTTTATATTTGGGA+GGG | - | chr4.3:22776518-22776537 | MS.gene052562:CDS | 40.0% | |
| GATGAATGGTTGAGAGTTGA+GGG | - | chr4.3:22774996-22775015 | MS.gene052562:intron | 40.0% | |
| GTAATATCTTCAGGAAGGTC+AGG | - | chr4.3:22773057-22773076 | MS.gene052562:intron | 40.0% | |
| GTTAAAACATTTGGCCAGGT+AGG | + | chr4.3:22775815-22775834 | None:intergenic | 40.0% | |
| TACATGTGTGTGCATTGTAC+AGG | - | chr4.3:22774171-22774190 | MS.gene052562:intron | 40.0% | |
| TCCATTCGAACAGAAACATG+TGG | - | chr4.3:22773781-22773800 | MS.gene052562:intron | 40.0% | |
| TCCTCAAGGTACAAGCATTT+AGG | - | chr4.3:22776200-22776219 | MS.gene052562:CDS | 40.0% | |
| TGAACTGAGAGTCATAGTCA+CGG | + | chr4.3:22772539-22772558 | None:intergenic | 40.0% | |
| TGAGACGCTTTATATTTGGG+AGG | - | chr4.3:22776517-22776536 | MS.gene052562:CDS | 40.0% | |
| TGATGAATGGTTGAGAGTTG+AGG | - | chr4.3:22774995-22775014 | MS.gene052562:intron | 40.0% | |
| TGATGTGAAAACAGGATCCA+TGG | - | chr4.3:22774690-22774709 | MS.gene052562:CDS | 40.0% | |
| TGTGGTATTCTGTCTATGCA+AGG | - | chr4.3:22776306-22776325 | MS.gene052562:intron | 40.0% | |
| TTAACAATCAGCAGGAAGAG+AGG | + | chr4.3:22775379-22775398 | None:intergenic | 40.0% | |
| TTAGATATAGCTCCACCTGA+GGG | + | chr4.3:22775523-22775542 | None:intergenic | 40.0% | |
| TTCCTGAAGATATTACGGAC+GGG | + | chr4.3:22773053-22773072 | None:intergenic | 40.0% | |
| TTTAGATATAGCTCCACCTG+AGG | + | chr4.3:22775524-22775543 | None:intergenic | 40.0% | |
| TTTCATCCACGGTTATGATG+GGG | + | chr4.3:22776022-22776041 | None:intergenic | 40.0% | |
| ! | ATGCACTGATGAGGAAACAT+TGG | + | chr4.3:22776170-22776189 | None:intergenic | 40.0% |
| ! | GATCCACACTTGGGATATTT+TGG | - | chr4.3:22773644-22773663 | MS.gene052562:intron | 40.0% |
| ! | TCCACATGTTTCTGTTCGAA+TGG | + | chr4.3:22773785-22773804 | None:intergenic | 40.0% |
| ! | TTAGGTCAATTTGCTCCTCT+GGG | - | chr4.3:22776218-22776237 | MS.gene052562:intron | 40.0% |
| ! | TTTAGGTCAATTTGCTCCTC+TGG | - | chr4.3:22776217-22776236 | MS.gene052562:intron | 40.0% |
| !! | GATTCTTACATGTGCTGGTT+GGG | - | chr4.3:22774549-22774568 | MS.gene052562:intron | 40.0% |
| !! | TCCATGGTTGTGAAAGTATC+TGG | - | chr4.3:22774706-22774725 | MS.gene052562:CDS | 40.0% |
| !! | TGATGGATTCTTACATGTGC+TGG | - | chr4.3:22774544-22774563 | MS.gene052562:intron | 40.0% |
| !! | TTATGGTTTGGTTGATGCAG+TGG | - | chr4.3:22772801-22772820 | MS.gene052562:CDS | 40.0% |
| !!! | ACCTGGCCAAATGTTTTAAC+CGG | - | chr4.3:22775815-22775834 | MS.gene052562:intron | 40.0% |
| !!! | CATTTTGCTATTGTTGGAGG+TGG | - | chr4.3:22774292-22774311 | MS.gene052562:CDS | 40.0% |
| !!! | TGTAGCACTGACACTTTTGA+TGG | - | chr4.3:22773114-22773133 | MS.gene052562:intron | 40.0% |
| AACCCGTCCGTAATATCTTC+AGG | - | chr4.3:22773048-22773067 | MS.gene052562:intron | 45.0% | |
| AAGACTGATGCAGACAACTC+AGG | - | chr4.3:22775443-22775462 | MS.gene052562:intron | 45.0% | |
| ACCGACAATGTGTATGCACT+TGG | - | chr4.3:22775020-22775039 | MS.gene052562:intron | 45.0% | |
| ACGCCAAAATATCCCAAGTG+TGG | + | chr4.3:22773650-22773669 | None:intergenic | 45.0% | |
| AGTGCTTCCGTGTTTCTTAC+TGG | - | chr4.3:22773251-22773270 | MS.gene052562:intron | 45.0% | |
| AGTTAAAATCACGCTCCTGG+AGG | - | chr4.3:22774399-22774418 | MS.gene052562:intron | 45.0% | |
| ATTTCTTCCTGCTACAGCTC+AGG | - | chr4.3:22775670-22775689 | MS.gene052562:intron | 45.0% | |
| CAATTGGACACAGCAGTCAA+TGG | - | chr4.3:22776282-22776301 | MS.gene052562:intron | 45.0% | |
| CCAATTGAAACCCAATCTCC+AGG | + | chr4.3:22776269-22776288 | None:intergenic | 45.0% | |
| CCTGGAGATTGGGTTTCAAT+TGG | - | chr4.3:22776266-22776285 | MS.gene052562:intron | 45.0% | |
| CGGCGTTACGGTTAAATTAG+AGG | + | chr4.3:22772665-22772684 | None:intergenic | 45.0% | |
| CGTCCGTAATATCTTCAGGA+AGG | - | chr4.3:22773052-22773071 | MS.gene052562:intron | 45.0% | |
| CTCTCTTCATCACTCACACT+AGG | + | chr4.3:22774259-22774278 | None:intergenic | 45.0% | |
| GACATCTTCTTACCTTACGG+TGG | + | chr4.3:22772580-22772599 | None:intergenic | 45.0% | |
| GATCTGCTGAAGGAATCCAA+GGG | - | chr4.3:22775569-22775588 | MS.gene052562:intron | 45.0% | |
| GCCAGATACTTTCACAACCA+TGG | + | chr4.3:22774710-22774729 | None:intergenic | 45.0% | |
| GGAGTCCACATTGGAAAAAG+CGG | + | chr4.3:22775642-22775661 | None:intergenic | 45.0% | |
| GGCTGTTGCTACATCTGAAT+CGG | - | chr4.3:22772848-22772867 | MS.gene052562:intron | 45.0% | |
| GGTGGAAAAATCCGCCATAT+CGG | + | chr4.3:22775996-22776015 | None:intergenic | 45.0% | |
| GGTTCATCTGATCCACACTT+GGG | - | chr4.3:22773635-22773654 | MS.gene052562:intron | 45.0% | |
| GTGCCATAGCTACTGATGAA+TGG | - | chr4.3:22774982-22775001 | MS.gene052562:intron | 45.0% | |
| GTTTGTGTCAGTTTCGTGTC+CGG | - | chr4.3:22773220-22773239 | MS.gene052562:CDS | 45.0% | |
| TCCGGTTAAAACATTTGGCC+AGG | + | chr4.3:22775819-22775838 | None:intergenic | 45.0% | |
| TCTCAATGATCCGCGATATG+AGG | - | chr4.3:22772935-22772954 | MS.gene052562:intron | 45.0% | |
| TGATCTGCTGAAGGAATCCA+AGG | - | chr4.3:22775568-22775587 | MS.gene052562:intron | 45.0% | |
| TGGTTCATCTGATCCACACT+TGG | - | chr4.3:22773634-22773653 | MS.gene052562:intron | 45.0% | |
| TTCCATATGGAATGGCTGTC+TGG | - | chr4.3:22774779-22774798 | MS.gene052562:CDS | 45.0% | |
| TTTCATCTCGGAGTCCACAT+TGG | + | chr4.3:22775651-22775670 | None:intergenic | 45.0% | |
| ! | CATAAGCTGTTGGGTTTGGT+TGG | - | chr4.3:22773399-22773418 | MS.gene052562:CDS | 45.0% |
| ! | CTCAGCTAGCTTAGAAATGC+AGG | + | chr4.3:22775282-22775301 | None:intergenic | 45.0% |
| ! | GGATTCTTACATGTGCTGGT+TGG | - | chr4.3:22774548-22774567 | MS.gene052562:intron | 45.0% |
| ! | TAGGTACCATGACTTTTCGC+TGG | + | chr4.3:22775064-22775083 | None:intergenic | 45.0% |
| ! | TATCAGGTTGCATCTCAGCA+AGG | - | chr4.3:22775787-22775806 | MS.gene052562:intron | 45.0% |
| ! | TTTTTACCTCGCCGATATGG+CGG | - | chr4.3:22775982-22776001 | MS.gene052562:CDS | 45.0% |
| !! | ATCGGTGCCGGAAAAGAAAA+AGG | - | chr4.3:22772866-22772885 | MS.gene052562:intron | 45.0% |
| !!! | CAAGACCGCTTTTTCCAATG+TGG | - | chr4.3:22775634-22775653 | MS.gene052562:intron | 45.0% |
| !!! | GGAGGGTTTTAGAGAAACGT+TGG | + | chr4.3:22772518-22772537 | None:intergenic | 45.0% |
| !!! | GGCCAAATGTTTTAACCGGA+TGG | - | chr4.3:22775819-22775838 | MS.gene052562:intron | 45.0% |
| !!! | TTTTATTTATGAATTAATTA+TGG | - | chr4.3:22772784-22772803 | MS.gene052562:CDS | 5.0% |
| AAAAATCCGCCATATCGGCG+AGG | + | chr4.3:22775991-22776010 | None:intergenic | 50.0% | |
| ACCATACCCCATCATAACCG+TGG | - | chr4.3:22776013-22776032 | MS.gene052562:CDS | 50.0% | |
| ACGACGTGAACCTCATATCG+CGG | + | chr4.3:22772948-22772967 | None:intergenic | 50.0% | |
| ACGGTACCGCAAGTAACACT+AGG | + | chr4.3:22773008-22773027 | None:intergenic | 50.0% | |
| ACTGAGAGTCATAGTCACGG+AGG | + | chr4.3:22772536-22772555 | None:intergenic | 50.0% | |
| AGGTCTAGCAGCGTTGTCTA+TGG | + | chr4.3:22776083-22776102 | None:intergenic | 50.0% | |
| ATTGTTGGAGGTGGTCCAAC+TGG | - | chr4.3:22774301-22774320 | MS.gene052562:CDS | 50.0% | |
| CAAATGGCAGTATGGCGAGA+GGG | - | chr4.3:22775959-22775978 | MS.gene052562:intron | 50.0% | |
| CAAGTAACACTAGGCAGCAG+AGG | + | chr4.3:22772999-22773018 | None:intergenic | 50.0% | |
| CTGAGAGTCATAGTCACGGA+GGG | + | chr4.3:22772535-22772554 | None:intergenic | 50.0% | |
| GACACAGCAGTCAATGGTTG+TGG | - | chr4.3:22776288-22776307 | MS.gene052562:intron | 50.0% | |
| GACCAGACAGCCATTCCATA+TGG | + | chr4.3:22774784-22774803 | None:intergenic | 50.0% | |
| GCTGTCTGGTCAACTGGTAT+TGG | - | chr4.3:22774793-22774812 | MS.gene052562:CDS | 50.0% | |
| GGGCAGGAACAAGTTTCTTG+AGG | - | chr4.3:22772910-22772929 | MS.gene052562:intron | 50.0% | |
| TCAAATGGCAGTATGGCGAG+AGG | - | chr4.3:22775958-22775977 | MS.gene052562:intron | 50.0% | |
| TCTAGCAGCGTTGTCTATGG+CGG | + | chr4.3:22776080-22776099 | None:intergenic | 50.0% | |
| TGAACAGCAAGCAAGTCAGC+TGG | - | chr4.3:22776463-22776482 | MS.gene052562:intron | 50.0% | |
| TGCACAGCTACCTGGAGATT+GGG | - | chr4.3:22776256-22776275 | MS.gene052562:intron | 50.0% | |
| TGCTACATCTGAATCGGTGC+CGG | - | chr4.3:22772854-22772873 | MS.gene052562:intron | 50.0% | |
| TGGCATTGCTGATCTGCTGA+AGG | - | chr4.3:22775559-22775578 | MS.gene052562:intron | 50.0% | |
| ! | AAGGTGTTAGTGCTGGGAAC+TGG | - | chr4.3:22772885-22772904 | MS.gene052562:intron | 50.0% |
| ! | ACGGTTATGATGGGGTATGG+TGG | + | chr4.3:22776014-22776033 | None:intergenic | 50.0% |
| ! | GGGTTTTTACCTCGCCGATA+TGG | - | chr4.3:22775979-22775998 | MS.gene052562:CDS | 50.0% |
| ! | GTTAGTGCTGGGAACTGGTT+GGG | - | chr4.3:22772890-22772909 | MS.gene052562:intron | 50.0% |
| ! | TCCACGGTTATGATGGGGTA+TGG | + | chr4.3:22776017-22776036 | None:intergenic | 50.0% |
| ! | TGGTCTTTTGGCATACGGTG+AGG | - | chr4.3:22772827-22772846 | MS.gene052562:intron | 50.0% |
| ! | TGTTACTTGCGGTACCGTTG+AGG | - | chr4.3:22773010-22773029 | MS.gene052562:intron | 50.0% |
| ! | TGTTAGTGCTGGGAACTGGT+TGG | - | chr4.3:22772889-22772908 | MS.gene052562:intron | 50.0% |
| !! | ACGGAAGCACTTACACACAC+CGG | + | chr4.3:22773242-22773261 | None:intergenic | 50.0% |
| !! | CATCTGTGAAAGGTACCCTC+AGG | - | chr4.3:22775505-22775524 | MS.gene052562:intron | 50.0% |
| !! | CTGCTGCCTAGTGTTACTTG+CGG | - | chr4.3:22772999-22773018 | MS.gene052562:intron | 50.0% |
| !! | TCTTACATGTGCTGGTTGGG+TGG | - | chr4.3:22774552-22774571 | MS.gene052562:intron | 50.0% |
| !! | TGGTTTGGTTGATGCAGTGG+CGG | - | chr4.3:22772804-22772823 | MS.gene052562:CDS | 50.0% |
| AAAATCACGCTCCTGGAGGC+TGG | - | chr4.3:22774403-22774422 | MS.gene052562:intron | 55.0% | |
| ACATGCACCTGAGCTGTAGC+AGG | + | chr4.3:22775680-22775699 | None:intergenic | 55.0% | |
| AGATATGACCTCCAGCCTCC+AGG | + | chr4.3:22774417-22774436 | None:intergenic | 55.0% | |
| CACAATGCTGCGAGCCTCAA+CGG | + | chr4.3:22773027-22773046 | None:intergenic | 55.0% | |
| CTGCACAGCTACCTGGAGAT+TGG | - | chr4.3:22776255-22776274 | MS.gene052562:intron | 55.0% | |
| CTTACCTTACGGTGGTGCAG+AGG | + | chr4.3:22772572-22772591 | None:intergenic | 55.0% | |
| GCTGCAAACTCCACTCCAGT+TGG | + | chr4.3:22774319-22774338 | None:intergenic | 55.0% | |
| GGAATGGCTGTCTGGTCAAC+TGG | - | chr4.3:22774787-22774806 | MS.gene052562:CDS | 55.0% | |
| TGGCAATTCTCCGTGACACC+AGG | + | chr4.3:22773971-22773990 | None:intergenic | 55.0% | |
| TTCTCCTCTGCACCACCGTA+AGG | - | chr4.3:22772565-22772584 | MS.gene052562:intron | 55.0% | |
| ! | ATCTCAGCAAGGCACCTACC+TGG | - | chr4.3:22775798-22775817 | MS.gene052562:intron | 55.0% |
| ! | ATGCAGTGGCGGTGGTCTTT+TGG | - | chr4.3:22772815-22772834 | MS.gene052562:CDS | 55.0% |
| ! | GGCGGTGGTCTTTTGGCATA+CGG | - | chr4.3:22772822-22772841 | MS.gene052562:CDS | 55.0% |
| ! | GGTCAATTTGCTCCTCTGGG+AGG | - | chr4.3:22776221-22776240 | MS.gene052562:intron | 55.0% |
| ! | TTTGGTTGATGCAGTGGCGG+TGG | - | chr4.3:22772807-22772826 | MS.gene052562:CDS | 55.0% |
| !! | CTGTGAAAGGTACCCTCAGG+TGG | - | chr4.3:22775508-22775527 | MS.gene052562:intron | 55.0% |
| !! | GTCATCGGTTCAAGCCCTTC+AGG | - | chr4.3:22775893-22775912 | MS.gene052562:intron | 55.0% |
| !! | TTAGGGGAGAAGGGCGTCAT+CGG | - | chr4.3:22775878-22775897 | MS.gene052562:intron | 55.0% |
| CAGACAGCTGCACAGCTACC+TGG | - | chr4.3:22776248-22776267 | MS.gene052562:intron | 60.0% | |
| CGTTGAGGCTCGCAGCATTG+TGG | - | chr4.3:22773025-22773044 | MS.gene052562:intron | 60.0% | |
| TGGAGGTGGTCCAACTGGAG+TGG | - | chr4.3:22774306-22774325 | MS.gene052562:CDS | 60.0% | |
| ! | GCAGCGTTGTCTATGGCGGA+TGG | + | chr4.3:22776076-22776095 | None:intergenic | 60.0% |
| !! | CTATGGCGGATGGCGGTTTG+TGG | + | chr4.3:22776066-22776085 | None:intergenic | 60.0% |
| !! | GCGTTGTCTATGGCGGATGG+CGG | + | chr4.3:22776073-22776092 | None:intergenic | 60.0% |
| ATCACGCTCCTGGAGGCTGG+AGG | - | chr4.3:22774406-22774425 | MS.gene052562:intron | 65.0% | |
| GTGCTGGGAACTGGTTGGGC+AGG | - | chr4.3:22772894-22772913 | MS.gene052562:intron | 65.0% | |
| ! | TGGCGGATGGCGGTTTGTGG+CGG | + | chr4.3:22776063-22776082 | None:intergenic | 65.0% |
| GCTGTCTGCTCGCCTCCCAG+AGG | + | chr4.3:22776236-22776255 | None:intergenic | 70.0% | |
| ! | CGGATGGCGGTTTGTGGCGG+AGG | + | chr4.3:22776060-22776079 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 22772495 | 22776557 | 22772495 | ID=MS.gene052562 |
| chr4.3 | mRNA | 22772495 | 22776557 | 22772495 | ID=MS.gene052562.t1;Parent=MS.gene052562 |
| chr4.3 | exon | 22776466 | 22776557 | 22776466 | ID=MS.gene052562.t1.exon1;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22776466 | 22776557 | 22776466 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22775979 | 22776231 | 22775979 | ID=MS.gene052562.t1.exon2;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22775979 | 22776231 | 22775979 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22775052 | 22775258 | 22775052 | ID=MS.gene052562.t1.exon3;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22775052 | 22775258 | 22775052 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22774609 | 22774859 | 22774609 | ID=MS.gene052562.t1.exon4;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22774609 | 22774859 | 22774609 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22774194 | 22774416 | 22774194 | ID=MS.gene052562.t1.exon5;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22774194 | 22774416 | 22774194 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22773976 | 22774080 | 22773976 | ID=MS.gene052562.t1.exon6;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22773976 | 22774080 | 22773976 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22773361 | 22773633 | 22773361 | ID=MS.gene052562.t1.exon7;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22773361 | 22773633 | 22773361 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22773138 | 22773259 | 22773138 | ID=MS.gene052562.t1.exon8;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22773138 | 22773259 | 22773138 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22772725 | 22772844 | 22772725 | ID=MS.gene052562.t1.exon9;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22772725 | 22772844 | 22772725 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| chr4.3 | exon | 22772495 | 22772582 | 22772495 | ID=MS.gene052562.t1.exon10;Parent=MS.gene052562.t1 |
| chr4.3 | CDS | 22772495 | 22772582 | 22772495 | ID=cds.MS.gene052562.t1;Parent=MS.gene052562.t1 |
| Gene Sequence |
| Protein sequence |
